[Debian-med-packaging] Bug#771154: plink: New major upstream version of plink

Bob Dybian bob.dybian at gmail.com
Thu Nov 27 07:31:29 UTC 2014


Package: plink
Severity: wishlist

Dear Maintainer,
Plink2 [1] was just presented at the annual meeting of the American Society of
Human Genetics 2014 [2]. Plink2 is a comprehensive update of plink with new
algorithms and new methods, faster and less memory consumer than the first
plink. As it was not totally compatible with first plink [1], I propose to
create a new package to permit the cohabitation of these two versions (like for
bowtie and bowtie2). If you agree, I will submit it [3] on Alioth.

Best regards,
Dylan

[1] https://www.cog-genomics.org/plink2/
[2] https://www.cog-genomics.org/static/pdf/plink2-ashg.pdf
[3] https://bitbucket.org/Dybian/package-debian-plink2



-- System Information:
Debian Release: 7.7
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-4-amd64 (SMP w/2 CPU cores)
Locale: LANG=fr_FR.utf8, LC_CTYPE=fr_FR.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash



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