[Debian-med-packaging] Need a (hopefully) last kick for finalising qualimap

[Andreas Tille]

Hi Emmanuel,

On Wed, Dec 02, 2015 at 01:25:24PM +0100, Emmanuel Bourg wrote:
> Le 2/12/2015 13:18, Andreas Tille a écrit :
> > "only dependency with system scope can specify systemPath."
> 
> Just add <scope>system</scope> where you added <systemPath>.
> 
> *kick*

Done (and pushed) and better but seems not to be final. :-(


[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Failed to resolve artifact.
        
Missing:
----------
1) org.bioinfo:bioinfo-ngs:jar:debian
        
  Try downloading the file manually from the project website.

  Then, install it using the command:.
      mvn install:install-file -DgroupId=org.bioinfo -DartifactId=bioinfo-ngs -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file

  Alternatively, if you host your own repository you can deploy the file there:.
      mvn deploy:deploy-file -DgroupId=org.bioinfo -DartifactId=bioinfo-ngs -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]

  Path to dependency:.
  	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
  	2) org.bioinfo:bioinfo-ngs:jar:debian

2) org.bioinfo:bioinfo-commons:jar:debian

  Try downloading the file manually from the project website.

  Then, install it using the command:.
      mvn install:install-file -DgroupId=org.bioinfo -DartifactId=bioinfo-commons -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file

  Alternatively, if you host your own repository you can deploy the file there:.
      mvn deploy:deploy-file -DgroupId=org.bioinfo -DartifactId=bioinfo-commons -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]

  Path to dependency:.
  	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
  	2) org.bioinfo:bioinfo-commons:jar:debian
        
3) org.ejml:ejml:jar:debian
        
  Try downloading the file manually from the project website.

  Then, install it using the command:.
      mvn install:install-file -DgroupId=org.ejml -DartifactId=ejml -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file

  Alternatively, if you host your own repository you can deploy the file there:.
      mvn deploy:deploy-file -DgroupId=org.ejml -DartifactId=ejml -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]

  Path to dependency:.
  	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
  	2) org.ejml:ejml:jar:debian


1)+2) are the "own" java files inside the source tree and 3) should come
from /usr/share/java/EJML.jar (libejml-java package).

Seems I did not git it right yet. :-(

Sorry for my constant bothering here

      Andreas.

-- 
http://fam-tille.de