[Debian-med-packaging] Bug#831100: conquest-dicom-server: FTBFS with GCC 6: cpp_type_traits.h:212:12: error: redefinition of 'struct std::__is_integer<unsigned int>'
Lucas Nussbaum
lucas at debian.org
Thu Jul 14 06:51:39 UTC 2016
Source: conquest-dicom-server
Version: 1.4.17d-1
Severity: serious
Tags: stretch sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20160713 qa-ftbfs
Justification: FTBFS with GCC 6 on amd64
Hi,
During a rebuild of all packages in sid using the gcc-defaults package
available in experimental to make GCC default to version 6, your package failed
to build on amd64. For more information about GCC 6 and Stretch, see:
- https://wiki.debian.org/GCC6
- https://lists.debian.org/debian-devel-announce/2016/06/msg00007.html
Relevant part (hopefully):
> /usr/bin/g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Ijasper-1.900.1-6ct/src/libjasper/include -Ijpeg-6c -I/usr/include/lua5.1 -DUNIX -DNATIVE_ENDIAN=1 -DHAVE_LIBJASPER -DHAVE_LIBJPEG -DUSESQLITE -Wno-write-strings total.cpp -o dgate-sqlite -lpthread -llua5.1 -lsqlite3 jpeg-6c/libjpeg.a jasper-1.900.1-6ct/src/libjasper/.libs/libjasper.a -Wno-multichar -Wl,-z,relro
> In file included from jasper-1.900.1-6ct/src/libjasper/include/jasper/jasper.h:65:0,
> from nkiqrsop.cpp:255,
> from total.cpp:135:
> jasper-1.900.1-6ct/src/libjasper/include/jasper/jas_config.h:65:0: warning: "HAVE_STDDEF_H" redefined
> #define HAVE_STDDEF_H 1
>
> In file included from jpeg-6c/jpeglib.h:25:0,
> from nkiqrsop.cpp:250,
> from total.cpp:135:
> jpeg-6c/jconfig.h:11:0: note: this is the location of the previous definition
> #define HAVE_STDDEF_H
>
> In file included from jasper-1.900.1-6ct/src/libjasper/include/jasper/jasper.h:65:0,
> from nkiqrsop.cpp:255,
> from total.cpp:135:
> jasper-1.900.1-6ct/src/libjasper/include/jasper/jas_config.h:71:0: warning: "HAVE_STDLIB_H" redefined
> #define HAVE_STDLIB_H 1
>
> In file included from jpeg-6c/jpeglib.h:25:0,
> from nkiqrsop.cpp:250,
> from total.cpp:135:
> jpeg-6c/jconfig.h:12:0: note: this is the location of the previous definition
> #define HAVE_STDLIB_H
>
> In file included from /usr/include/c++/6/cmath:42:0,
> from /usr/include/c++/6/math.h:36,
> from jasper-1.900.1-6ct/src/libjasper/include/jasper/jas_fix.h:79,
> from jasper-1.900.1-6ct/src/libjasper/include/jasper/jasper.h:72,
> from nkiqrsop.cpp:255,
> from total.cpp:135:
> /usr/include/c++/6/bits/cpp_type_traits.h:212:12: error: redefinition of 'struct std::__is_integer<unsigned int>'
> struct __is_integer<unsigned int>
> ^~~~~~~~~~~~~~~~~~~~~~~~~~
> /usr/include/c++/6/bits/cpp_type_traits.h:138:12: error: previous definition of 'struct std::__is_integer<unsigned int>'
> struct __is_integer<bool>
> ^~~~~~~~~~~~~~~~~~
> In file included from total.cpp:104:0:
> filepdu.cxx: In member function 'DICOMDataObject* PDU_Service::LoadDICOMDataObject(char*)':
> filepdu.cxx:126:20: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(s, 1, 4, fp);
> ^
> filepdu.cxx:136:17: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(s,1,6,fp);
> ^
> In file included from total.cpp:114:0:
> rtc.cxx: In member function 'BOOL RTC::AttachRTC(char*)':
> rtc.cxx:213:39: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 1024 - sizeof( INT ), fp );
> ^
> rtc.cxx:225:38: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets( s, 1024 - sizeof(INT), fp);
> ^
> rtc.cxx:238:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:249:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:261:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:272:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:284:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:295:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:307:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:320:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets (s, 1024 - sizeof(INT), fp );
> ^
> rtc.cxx:334:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets(s,1024 - sizeof(INT), fp);
> ^
> rtc.cxx:374:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets(s,1024 - sizeof(INT), fp);
> ^
> rtc.cxx:401:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets(s,1024 - sizeof(INT), fp);
> ^
> rtc.cxx: In member function 'BOOL RTC::AttachBinaryRTC(char*)':
> rtc.cxx:559:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread ((char*)&bRTCHeader, 1, 1024, fp);
> ^
> rtc.cxx:579:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread((char*)TypeCodes->KeyTable, 1, bRTCHeader.AbsKeyTableSize, fp);
> ^
> rtc.cxx:588:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(pBuffer, 1, bRTCHeader.AbsDataTableSize, fp);
> ^
> rtc.cxx:614:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread((char*)StringTable, 1, bRTCHeader.AbsStringTableSize, fp);
> ^
> In file included from total.cpp:115:0:
> flpdu.cxx: In constructor 'CheckedPDU_Service::CheckedPDU_Service(char*)':
> flpdu.cxx:121:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:126:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets( s, 255, fp );
> ^
> flpdu.cxx:139:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:154:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:166:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:180:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:192:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:220:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:291:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:296:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets( s, 255, fp );
> ^
> flpdu.cxx:309:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:324:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:336:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:350:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:362:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> flpdu.cxx:437:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fgets ( s, 255, fp );
> ^
> In file included from total.cpp:134:0:
> odbci.cpp: In function 'void write_dbheader(dbase_header*)':
> odbci.cpp:526:38: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(th->filehandle,&th->junk1,32); /* write the header */
> ^
> odbci.cpp: In function 'void read_dbheader(dbase_header*)':
> odbci.cpp:533:37: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> read(th->filehandle,&th->junk1,32); /* and read the header */
> ^
> odbci.cpp: In function 'void dbase_close(dbase_header*)':
> odbci.cpp:824:39: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> c=0x1a; write(th->filehandle,&c,1);
> ^
> odbci.cpp: In function 'int dbase_read(dbase_header*, int, char**)':
> odbci.cpp:1886:44: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> read(th->filehandle,p,th->recordlength); /* and read it */
> ^
> odbci.cpp: In function 'int dbase_trunc(dbase_header*, int)':
> odbci.cpp:2125:38: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(th->filehandle,&eof_marker,1); /* write EOF marker */
> ^
> odbci.cpp: In function 'int dbase_pack(dbase_header*)':
> odbci.cpp:2204:64: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> if(wbuffer) write(th->filehandle,buf,th->recordlength*wbuffer);
> ^
> odbci.cpp:2217:68: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> if (wbuffer) write(th->filehandle,buf,th->recordlength*wbuffer);
> ^
> odbci.cpp: In function 'BOOL Fill_Memory_Index(dbase_header*)':
> odbci.cpp:2434:24: warning: ignoring return value of 'ssize_t read(int, void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> read(f, field, len);
> ^
> In file included from total.cpp:135:0:
> nkiqrsop.cpp: In function 'BOOL DecompressNKI(char*, char*)':
> nkiqrsop.cpp:1697:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(buffer, 1, fileLength, f);
> ^
> In file included from total.cpp:135:0:
> nkiqrsop.cpp: In function 'BOOL ExecHidden(const char*, const char*, const char*, const char*, const char*)':
> nkiqrsop.cpp:2426:21: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(line);
> ^
> In file included from total.cpp:135:0:
> nkiqrsop.cpp: In function 'BOOL ToJPG(DICOMDataObject*, char*, int, int, int, int, unsigned int, int)':
> nkiqrsop.cpp:5811:18: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(file2);
> ^
> In file included from total.cpp:137:0:
> dgate.cpp: In function 'BOOL AddImageFile(char*, char*, ExtendedPDU_Service*)':
> dgate.cpp:3120:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(p, 1, len, f);
> ^
> dgate.cpp:3151:15: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(line);
> ^
> dgate.cpp: In function 'BOOL BackgroundExec(char*, char*)':
> dgate.cpp:3835:22: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(theExecName);
> ^
> dgate.cpp: In function 'BOOL CallExportConverterN(char*, int, char*, char*, char*, char*, ExtendedPDU_Service*, char*, char*, char*)':
> dgate.cpp:5617:22: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(cline);
> ^
> dgate.cpp:5728:21: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(line);
> ^
> dgate.cpp:5750:22: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(line1);
> ^
> In file included from total.cpp:137:0:
> dgate.cpp: In function 'BOOL SendServerCommand(const char*, const char*, int, char*, BOOL, BOOL)':
> dgate.cpp:21815:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread((char*)(vr->Data), 1, len, f);
> ^
> dgate.cpp:21852:27: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(con, buf1, len);
> ^
> dgate.cpp:21861:31: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(con, vr->Data, len);
> ^
> dgate.cpp: In function 'int CGI(char*, const char*, const char*)':
> dgate.cpp:22002:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(post_buf, len, 1, stdin);
> ^
> dgate.cpp: In function 'void HTML(const char*, ...)':
> dgate.cpp:21972:31: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(console, s, strlen(s));
> ^
> dgate.cpp:21973:23: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(console, n, 1);
> ^
> dgate.cpp: In function 'int CallImportConverterN(DICOMDataObject*, int, char*, char*, char*, char*, ExtendedPDU_Service*, char*, char*)':
> dgate.cpp:8618:20: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(cline);
> ^
> dgate.cpp:8647:20: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(cline);
> ^
> dgate.cpp: In function 'BOOL prefetchprocess(char*, ExtendedPDU_Service*, char*)':
> dgate.cpp:10363:23: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(data+230);
> ^
> dgate.cpp: In function 'BOOL zipthread()':
> dgate.cpp:11168:13: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result]
> system(b);
> ^
> dgate.cpp: In member function 'virtual BOOL StorageApp::ServerChild(int)':
> dgate.cpp:20564:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread(p2, 1, len, f);
> ^
> dgate.cpp:20791:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
> fread((char*)(vr2->Data)+extra, 1, len, f);
> ^
> dgate.cpp: In function 'void DgateCgi(char*, char*)':
> dgate.cpp:23578:33: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
> write(console, s, strlen(s));
> ^
> make[1]: *** [dgate-sqlite] Error 1
The full build log is available from:
http://people.debian.org/~lucas/logs/2016/07/13/conquest-dicom-server_1.4.17d-1_unstable_gcc6.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
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