r35760 - in /packages/slicer/trunk/debian: changelog control copyright get-orig-source libslicer3-dev.install menu patches/50_all_changes.dpatch rules watch

domibel-guest at users.alioth.debian.org domibel-guest at users.alioth.debian.org
Thu Jun 11 14:15:33 UTC 2009


Author: domibel-guest
Date: Thu Jun 11 14:15:30 2009
New Revision: 35760

URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=35760
Log:
using debians tclap now

Modified:
    packages/slicer/trunk/debian/changelog
    packages/slicer/trunk/debian/control
    packages/slicer/trunk/debian/copyright
    packages/slicer/trunk/debian/get-orig-source
    packages/slicer/trunk/debian/libslicer3-dev.install
    packages/slicer/trunk/debian/menu
    packages/slicer/trunk/debian/patches/50_all_changes.dpatch
    packages/slicer/trunk/debian/rules
    packages/slicer/trunk/debian/watch

Modified: packages/slicer/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/changelog?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/changelog (original)
+++ packages/slicer/trunk/debian/changelog Thu Jun 11 14:15:30 2009
@@ -1,4 +1,4 @@
-slicer (3.4.0~svn9629-1) unstable; urgency=low
+slicer (3.4.0~svn9679-1) experimental; urgency=low
 
   * Initial release (Closes: #500841)
 

Modified: packages/slicer/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/control?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/control (original)
+++ packages/slicer/trunk/debian/control Thu Jun 11 14:15:30 2009
@@ -6,7 +6,7 @@
 Build-Depends: debhelper (>= 7), dpatch, cmake, tcl8.4-dev, tk8.4-dev, libpng-dev, libjpeg-dev,
  libtiff-dev, libexpat1-dev, libinsighttoolkit3-dev, libkwwidgets1-dev, libcurl4-openssl-dev,
  libfreetype6-dev, libxext-dev, libvtk5-dev, libteem1-dev, libopenigtlink1-dev, chrpath, 
- uuid-dev, libbz2-dev, libxft-dev, 
+ uuid-dev, libbz2-dev, libxft-dev, libtclap-dev
 Build-Depends-Indep: doxygen, graphviz
 Standards-Version: 3.8.1
 Vcs-Browser: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/?rev=0&sc=0
@@ -17,16 +17,15 @@
 
 Package: slicer
 Architecture: any
-Depends: libslicer3 (= ${binary:Version}), ${shlibs:Depends}, itcl3, iwidgets4, tcllib
+Depends: libslicer3 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends}, itcl3, iwidgets4, tcllib
 Description: software package for visualization and image analysis - main application
- Slicer's capabilities include:
- .
-    * interactive visualization of images,
-    * manual editing,
-    * fusion and co-registering of data,
-    * automatic segmentation,
-    * analysis of diffuse tensor imaging data, and
-    * visualization of tracking information for image-guided procedures.
+ Slicer is an application for computer scientists and clinical researchers. The platform
+ provides functionality for segmentation, registration and three-dimensional
+ visualization of multi-modal image data, as well as advanced image analysis
+ algorithms for diffusion tensor imaging, functional magnetic resonance imaging
+ and image-guided therapy. Standard image file formats are supported, and the
+ application integrates interface capabilities to biomedical research software
+ and image informatics frameworks. 
  .
  Slicer 3D main application.
 
@@ -34,16 +33,16 @@
 Package: libslicer3
 Section: libs
 Architecture: any
-Depends: ${shlibs:Depends}
+Depends: ${shlibs:Depends}, ${misc:Depends} 
 Description: software package for visualization and image analysis - runtime
+ Slicer is an application for computer scientists and clinical researchers. The platform
+ provides functionality for segmentation, registration and three-dimensional
+ visualization of multi-modal image data, as well as advanced image analysis
+ algorithms for diffusion tensor imaging, functional magnetic resonance imaging
+ and image-guided therapy. Standard image file formats are supported, and the
+ application integrates interface capabilities to biomedical research software
+ and image informatics frameworks.
  Slicer's capabilities include:
- .
-    * interactive visualization of images,
-    * manual editing,
-    * fusion and co-registering of data,
-    * automatic segmentation,
-    * analysis of diffuse tensor imaging data, and
-    * visualization of tracking information for image-guided procedures.
  .
  Slicer libraries. Its possible to extend its functionality.
 
@@ -51,16 +50,15 @@
 Package: libslicer3-dev
 Section: libdevel
 Architecture: any
-Depends: libslicer3 (= ${binary:Version}), ${shlibs:Depends}
+Depends: libslicer3 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends} 
 Description: software package for visualization and image analysis - development
- Slicer's capabilities include: 
- .
-    * interactive visualization of images,
-    * manual editing,
-    * fusion and co-registering of data,
-    * automatic segmentation,
-    * analysis of diffuse tensor imaging data, and
-    * visualization of tracking information for image-guided procedures.
+ Slicer is an application for computer scientists and clinical researchers. The platform
+ provides functionality for segmentation, registration and three-dimensional
+ visualization of multi-modal image data, as well as advanced image analysis
+ algorithms for diffusion tensor imaging, functional magnetic resonance imaging
+ and image-guided therapy. Standard image file formats are supported, and the
+ application integrates interface capabilities to biomedical research software
+ and image informatics frameworks.
  .
  Slicer3D development files.
 
@@ -68,16 +66,16 @@
 Package: slicer-share
 Section: doc
 Architecture: all
-Depends: slicer, tk8.4 | wish
+Depends: ${misc:Depends}, slicer, tk8.4 | wish
 Description: software package for visualization and image analysis - share
+ Slicer is an application for computer scientists and clinical researchers. The platform
+ provides functionality for segmentation, registration and three-dimensional
+ visualization of multi-modal image data, as well as advanced image analysis
+ algorithms for diffusion tensor imaging, functional magnetic resonance imaging
+ and image-guided therapy. Standard image file formats are supported, and the
+ application integrates interface capabilities to biomedical research software
+ and image informatics frameworks.
  Slicer's capabilities include:
- .
-    * interactive visualization of images,
-    * manual editing,
-    * fusion and co-registering of data,
-    * automatic segmentation,
-    * analysis of diffuse tensor imaging data, and
-    * visualization of tracking information for image-guided procedures.
  .
  Slicer3D share files.
 

Modified: packages/slicer/trunk/debian/copyright
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/copyright?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/copyright (original)
+++ packages/slicer/trunk/debian/copyright Thu Jun 11 14:15:30 2009
@@ -2,8 +2,9 @@
 Source: http://www.slicer.org/
 
 
+Files: *
 Copyright: 2009, Brigham and Women's Hospital (BWH)
-License: other
+License: other (3D Slicer license)
  The 3D Slicer license below is a BSD style license, with extensions
  to cover contributions and other issues specific to 3D Slicer.
  .
@@ -192,9 +193,9 @@
  8. This Software License does not grant any rights in or to any
     intellectual property owned by Brigham or any Contributor except
     those rights expressly granted hereunder.
- 
+ .
  PART C. MISCELLANEOUS
- 
+ .
  This Agreement shall be governed by and construed in accordance with
  the laws of The Commonwealth of Massachusetts without regard to
  principles of conflicts of law. This Agreement shall supercede and
@@ -202,9 +203,35 @@
  respect to Slicer.
 
 
+Files:
+ ./Applications/CLI/DWIDicomLoad.cxx
+ ./Applications/CLI/DicomToNrrdConverter.cxx
+Copyright: General Electric Global Research.
+License: other (3D Slicer license)
+ for license text see above
+
+
+Files:
+ ./Modules/Meshing/Common/vtkMeshQualityClass.cxx
+ ./Modules/Meshing/BuildingBlock/vtkFaceHedgeHog.cxx
+ ./Modules/Meshing/BuildingBlock/vtkFaceHedgeHog.h
+ ./Modules/Meshing/Filter/vtkFaceHedgeHog.cxx
+Copyright: 2007, KnowledgeVis, LLC.
+License: other (3D Slicer license)
+ for license text see above
+
+
+Files:
+ ./Modules/Meshing/Common/mimxMatrixTemplate.h
+Copyright: 2000, S. D. Rajan
+License: other (3D Slicer license)
+ see above
+
+ 
+
 Files: ./Modules/Meshing/*
 Copyright: 2008 MIMX, The University of Iowa
-License: other
+License: other (MIMX license)
  Permission is hereby granted, free of charge, to any 
  person obtaining a copy of this software and 
  associated documentation files (the "Software"), to 
@@ -233,14 +260,6 @@
  .
  See the web site: http://www.ccad.uiowa.edu/mimx for 
  more information.
-
-
-Files:
- ./Modules/Meshing/Adapter/itkImageToVTKImageFilter.h
- ./Modules/Meshing/Adapter/itkImageToVTKImageFilter.txx
-Copyright: ....Insight....
-License: other
- ....
 
 
 Files:
@@ -257,8 +276,6 @@
  ./Modules/EMSegment/Algorithm/EMLocalRegistrationCostFunction.h
  ./Modules/EMSegment/Algorithm/EMLocalRegistrationCostFunction.cxx
  ./Modules/EMSegment/Algorithm/itkEMLocalOptimization.h
- ./Modules/ChangeTracker/Filters/vtkImageKilianDistanceTransform.cxx
- ./Modules/ChangeTracker/Filters/vtkImageKilianDistanceTransform.h
  ./Modules/ChangeTracker/Filters/vtkImageSumOverVoxels.h
 Copyright: 2001, Massachusetts Institute of Technology
 License: other
@@ -361,7 +378,6 @@
  ./Base/CLI/itkPluginFilterWatcher.h
  ./Modules/Meshing/Mesh/itkMimxImageToVtkUnstructuredGridFilter.txx
  ./Modules/Meshing/Filter/vtkMimxRebinMaterialProperty.cxx
- ./Modules/Meshing/Filter/itkMimxAccumulator.h
  ./Modules/Meshing/Filter/vtkMimxRebinMaterialProperty.h
  ./Modules/Meshing/Filter/itkMimxImageToVtkUnstructuredGridFilter.txx
  ./Modules/Meshing/Testing/vtkRebinMaterialPropertyTest.cxx
@@ -382,7 +398,7 @@
  ./Libs/MRMLIDImageIO/itkMRMLIDImageIOFactory.h
  ./Libs/MRMLIDImageIO/itkMRMLIDImageIOFactory.cxx
 Copyright: Insight Software Consortium.
-License: other
+License: other (ITK license)
  Redistribution and use in source and binary forms, with or without
  modification, are permitted provided that the following conditions are met:
  .
@@ -409,58 +425,150 @@
  SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
-Files: ./Modules/ProstateNav/newmat/*
-Copyright: 1990-2006, Robert Davies <robert[a]statsresearch.co.nz>
-Licence:
- I place no restrictions on the use of newmat except that I take
- no liability for any problems that may arise from its use,
- distribution or other dealings with it.
- .
- You can use it in your commercial projects.
- .
- You can make and distribute modified or merged versions. You can
- include parts of it in your own software.
- .
- If you distribute modified or merged versions, please make it
- clear which parts are mine and which parts are modified.
- .
- For a substantially modified version, simply note that it is,
- in part, derived from my software. A comment in the code will
- be sufficient.
- .
- The software is provided "as is", without warranty of any kind.
- .
- Please understand that there may still be bugs and errors.
- .
- Use at your own risk. I (Robert Davies) take no responsibility
- for any errors or omissions in this package or for any misfortune
- that may befall you or others as a result of your use,
- distribution or other dealings with it.
-
-
-Files: ./Libs/tclap/*
-Copyright: 2003, Michael E. Smoot 
-Licence:
- Permission is hereby granted, free of charge, to any person 
- obtaining a copy of this software and associated documentation 
- files (the "Software"), to deal in the Software without restriction, 
- including without limitation the rights to use, copy, modify, merge, 
- publish, distribute, sublicense, and/or sell copies of the Software, 
- and to permit persons to whom the Software is furnished to do so, 
- subject to the following conditions:
- .
- The above copyright notice and this permission notice shall be 
- included in all copies or substantial portions of the Software.
- .
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, 
- EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES 
- OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND 
- NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS 
- BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN 
- AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR 
- IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN 
- THE SOFTWARE.
-
+Files: ./Modules/Meshing/Filter/itkMimxAccumulator.h
+Copyright:
+ 2008 MIMX, The University of Iowa
+ Insight Software Consortium
+Licence: other (ITK license AND MIMX license)
+ for license text see above
+
+
+Files:
+ ./Modules/ChangeTracker/Filters/vtkImageKilianDistanceTransform.cxx
+ ./Modules/ChangeTracker/Filters/vtkImageKilianDistanceTransform.h
+Copyright:
+ 1993-2002 Ken Martin, Will Schroeder, Bill Lorensen 
+ 2001 Massachusetts Institute of Technology
+License: other (ITK and MIT)
+ for license text see above
+
+
+Files: ./Libs/SlicerIO/utilities.c
+Copyright: 2004, Robert Seeger (RHS)
+License: other
+ On Tue, 2009-05-19 at 09:12 -0400, Robert Seeger wrote:
+ > Dominique,
+ > 
+ > You are welcome to use my code however you need to, free of license
+ > restrictions. While I'd prefer you didn't claim you wrote it yourself,
+ > I don't particularly care if you include anything indicating that
+ > I did write it (I don't mind either way).
+ > 
+
+
+Files:
+ ./Applications/CLI/DiffeomorphicDemonsRegistration/DemonsRegistration.cxx
+Copyright: Tom Vercauteren, INRIA & Mauna Kea Technologies
+License: BSD
+ On Debian systems the full text of the BSD License can be
+ found in the `/usr/share/common-licenses/BSD' file.
+
+
+Files:
+ ./Modules/Meshing/Common/vtkPVAxesActor.cxx
+ ./Modules/Meshing/Common/vtkPVAxesActor.h
+Copyright: Kitware, Inc.
+License: other (ParaView License Version 1.2)
+ -----------------------------------------------------------------------------
+ Copyright (c) 2005-2008 Sandia Corporation, Kitware Inc.
+ .
+ Sandia National Laboratories, New Mexico PO Box 5800 Albuquerque, NM 87185
+ .
+ Kitware Inc.
+ 28 Corporate Drive
+ Clifton Park, NY 12065
+ USA
+ .
+ Under the terms of Contract DE-AC04-94AL85000, there is a non-exclusive 
+ license for use of this work by or on behalf of the U.S. Government.
+ .
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are met:
+ .
+ * Redistributions of source code must retain the above copyright notice,
+   this list of conditions and the following disclaimer.
+ .
+ * Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+ .
+ * Neither the name of Kitware nor the names of any contributors may be used
+   to endorse or promote products derived from this software without specific
+   prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS''
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHORS OR CONTRIBUTORS BE LIABLE FOR
+ ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ -----------------------------------------------------------------------------
+
+
+Files:
+ ./Base/GUI/Python/ipTk.py
+Copyright: 2009, Demian Wassermann, EPI Odyssee, INRIA Sophia-Antipolis
+License: BSD
+ On Debian systems the full text of the BSD License can be
+ found in the `/usr/share/common-licenses/BSD' file.
+
+
+Files:
+ ./Base/GUI/Python/_mytkinter.c
+Copyright: 1994 Steen Lumholt
+License: PSF-2
+ PYTHON SOFTWARE FOUNDATION LICENSE VERSION 2
+ --------------------------------------------
+ .
+ 1. This LICENSE AGREEMENT is between the Python Software Foundation
+ ("PSF"), and the Individual or Organization ("Licensee") accessing and
+ otherwise using this software ("Python") in source or binary form and
+ its associated documentation.
+ .
+ 2. Subject to the terms and conditions of this License Agreement, PSF
+ hereby grants Licensee a nonexclusive, royalty-free, world-wide
+ license to reproduce, analyze, test, perform and/or display publicly,
+ prepare derivative works, distribute, and otherwise use Python
+ alone or in any derivative version, provided, however, that PSF's
+ License Agreement and PSF's notice of copyright, i.e., "Copyright (c)
+ 2001, 2002, 2003, 2004, 2005, 2006 Python Software Foundation; All Rights
+ Reserved" are retained in Python alone or in any derivative version 
+ prepared by Licensee.
+ .
+ 3. In the event Licensee prepares a derivative work that is based on
+ or incorporates Python or any part thereof, and wants to make
+ the derivative work available to others as provided herein, then
+ Licensee hereby agrees to include in any such work a brief summary of
+ the changes made to Python.
+ .
+ 4. PSF is making Python available to Licensee on an "AS IS"
+ basis.  PSF MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
+ IMPLIED.  BY WAY OF EXAMPLE, BUT NOT LIMITATION, PSF MAKES NO AND
+ DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
+ FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF PYTHON WILL NOT
+ INFRINGE ANY THIRD PARTY RIGHTS.
+ .
+ 5. PSF SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF PYTHON
+ FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
+ A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON,
+ OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
+ .
+ 6. This License Agreement will automatically terminate upon a material
+ breach of its terms and conditions.
+ .
+ 7. Nothing in this License Agreement shall be deemed to create any
+ relationship of agency, partnership, or joint venture between PSF and
+ Licensee.  This License Agreement does not grant permission to use PSF
+ trademarks or trade name in a trademark sense to endorse or promote
+ products or services of Licensee, or any third party.
+ .
+ 8. By copying, installing or otherwise using Python, Licensee
+ agrees to be bound by the terms and conditions of this License
+ Agreement.
 
 
 Files: debian/*

Modified: packages/slicer/trunk/debian/get-orig-source
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/get-orig-source?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/get-orig-source (original)
+++ packages/slicer/trunk/debian/get-orig-source Thu Jun 11 14:15:30 2009
@@ -30,6 +30,7 @@
 rm -rf ./Utilities/Launcher/Slicer3.vfs/
 rm -f ./Utilities/Launcher/3DSlicerLogoICOimages/Thumbs.db
 rm -rf ./Libs/tclap/msc/
+rm -rf ./Libs/tclap/
 #- find . -type f -name *.vcproj | xargs rm
 rm -f ./Modules/QueryAtlas/Resources/controlledVocabulary.xls
 #rm -f ./Modules/ChangeTracker/Testing/scan2.raw.gz
@@ -49,6 +50,7 @@
 #rm ./Modules/EMSegment/Testing/TestData/TutorialTest/VolumeData/targetT2Normed_small.raw
 rm ./Modules/Editor/ImageData/Thumbs.db
 rm ./Modules/MRAblation/.vtkMRAblationLogic.cxx.swo
+grep -rnl Davies ./Modules/ProstateNav/newmat/ | xargs rm
 cd ..
 
 GZIP=-9 tar czf ${TARFILE} ${FOLDER}

Modified: packages/slicer/trunk/debian/libslicer3-dev.install
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/libslicer3-dev.install?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/libslicer3-dev.install (original)
+++ packages/slicer/trunk/debian/libslicer3-dev.install Thu Jun 11 14:15:30 2009
@@ -4,7 +4,6 @@
 usr/include
 usr/lib/GenerateLM
 usr/lib/GenerateCLP
-usr/lib/tclap
 usr/lib/LoadableModule
 usr/lib/ModuleDescriptionParser
 usr/lib/Slicer3/*cmake

Modified: packages/slicer/trunk/debian/menu
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/menu?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/menu (original)
+++ packages/slicer/trunk/debian/menu Thu Jun 11 14:15:30 2009
@@ -1,2 +1,2 @@
 ?package(slicer):needs="X11" section="Applications/Science/Medicine"\
-  title="3D Slicer" command="/usr/bin/Slicer3-real"
+  title="3D Slicer" command="/usr/bin/slicer3"

Modified: packages/slicer/trunk/debian/patches/50_all_changes.dpatch
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/patches/50_all_changes.dpatch?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/patches/50_all_changes.dpatch (original)
+++ packages/slicer/trunk/debian/patches/50_all_changes.dpatch Thu Jun 11 14:15:30 2009
@@ -5,9 +5,9 @@
 ## DP: This patch adds soname version numbers
 
 @DPATCH@
-diff -urNad slicer-3.4.0~svn9629~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt slicer-3.4.0~svn9629/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt	2008-06-24 18:14:09.000000000 -0400
-+++ slicer-3.4.0~svn9629/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt slicer-3.4.0~svn9679/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -18,8 +18,8 @@
  
  #
@@ -37,9 +37,9 @@
  
  #
  # Move exec and module to where Slicer can find them
-diff -urNad slicer-3.4.0~svn9629~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx slicer-3.4.0~svn9629/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx
---- slicer-3.4.0~svn9629~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx	2009-04-10 13:33:12.000000000 -0400
-+++ slicer-3.4.0~svn9629/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx slicer-3.4.0~svn9679/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx
+--- slicer-3.4.0~svn9679~/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Applications/CLI/MIDASApplications/DownloadSlicerTutorials/DownloadSlicerTutorials.cxx	2009-06-10 23:35:45.000000000 -0400
 @@ -3,7 +3,7 @@
  #endif
  
@@ -49,9 +49,9 @@
  #include <itksys/SystemTools.hxx>
  #include <itksys/Process.h>
  #include <math.h>
-diff -urNad slicer-3.4.0~svn9629~/Applications/GUI/CMakeLists.txt slicer-3.4.0~svn9629/Applications/GUI/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Applications/GUI/CMakeLists.txt	2009-02-11 17:48:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Applications/GUI/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Applications/GUI/CMakeLists.txt slicer-3.4.0~svn9679/Applications/GUI/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Applications/GUI/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Applications/GUI/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -45,7 +45,7 @@
      set(Slicer3_FORWARD_PATH_BUILD 
        "\"${Slicer3_FORWARD_DIR_BUILD}\",\"${VTK_DIR}/bin\",\"${KWWidgets_RUNTIME_DIRS}\",\"${ITK_DIR}/bin\",\"${Teem_DIR}/bin\",\"${TCL_DIR}/bin\",\"${INCR_TCL_LIBRARY_PATH}\",\"${INCR_TK_LIBRARY_PATH}\",\"${OPENGL_gl_LIBRARY_PATH}\"")
@@ -74,9 +74,9 @@
  
  # --------------------------------------------------------------------------
  # Include dirs
-diff -urNad slicer-3.4.0~svn9629~/Applications/GUI/Slicer3.cxx slicer-3.4.0~svn9629/Applications/GUI/Slicer3.cxx
---- slicer-3.4.0~svn9629~/Applications/GUI/Slicer3.cxx	2009-05-12 17:24:53.000000000 -0400
-+++ slicer-3.4.0~svn9629/Applications/GUI/Slicer3.cxx	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Applications/GUI/Slicer3.cxx slicer-3.4.0~svn9679/Applications/GUI/Slicer3.cxx
+--- slicer-3.4.0~svn9679~/Applications/GUI/Slicer3.cxx	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Applications/GUI/Slicer3.cxx	2009-06-10 23:35:45.000000000 -0400
 @@ -411,7 +411,7 @@
      }
  
@@ -86,9 +86,9 @@
    vtkKWApplication::PutEnv(const_cast <char *> (tclEnv.c_str()));
  
    // ITK factories dir
-diff -urNad slicer-3.4.0~svn9629~/Base/CLI/CMakeLists.txt slicer-3.4.0~svn9629/Base/CLI/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Base/CLI/CMakeLists.txt	2008-05-20 03:31:33.000000000 -0400
-+++ slicer-3.4.0~svn9629/Base/CLI/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Base/CLI/CMakeLists.txt slicer-3.4.0~svn9679/Base/CLI/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Base/CLI/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Base/CLI/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -58,6 +58,11 @@
  slicer3_get_persistent_property(Slicer3_Base_LIBRARIES tmp)
  slicer3_set_persistent_property(Slicer3_Base_LIBRARIES ${tmp} SlicerBaseCLI)
@@ -101,9 +101,9 @@
  install(TARGETS SlicerBaseCLI
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/Base/GUI/CMakeLists.txt slicer-3.4.0~svn9629/Base/GUI/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Base/GUI/CMakeLists.txt	2009-03-16 11:34:28.000000000 -0400
-+++ slicer-3.4.0~svn9629/Base/GUI/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Base/GUI/CMakeLists.txt slicer-3.4.0~svn9679/Base/GUI/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Base/GUI/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Base/GUI/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -177,6 +177,11 @@
    RemoteIO
    )
@@ -116,9 +116,9 @@
  slicer3_get_persistent_property(Slicer3_Base_LIBRARIES tmp)
  slicer3_set_persistent_property(Slicer3_Base_LIBRARIES ${tmp} ${lib_name})
  
-diff -urNad slicer-3.4.0~svn9629~/Base/Logic/CMakeLists.txt slicer-3.4.0~svn9629/Base/Logic/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Base/Logic/CMakeLists.txt	2008-11-05 14:25:28.000000000 -0500
-+++ slicer-3.4.0~svn9629/Base/Logic/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Base/Logic/CMakeLists.txt slicer-3.4.0~svn9679/Base/Logic/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Base/Logic/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Base/Logic/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -115,6 +115,11 @@
  slicer3_get_persistent_property(Slicer3_Base_LIBRARIES tmp)
  slicer3_set_persistent_property(Slicer3_Base_LIBRARIES ${tmp} ${lib_name})
@@ -131,9 +131,9 @@
  install(TARGETS ${lib_name}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/CMakeLists.txt slicer-3.4.0~svn9629/CMakeLists.txt
---- slicer-3.4.0~svn9629~/CMakeLists.txt	2009-04-22 19:00:01.000000000 -0400
-+++ slicer-3.4.0~svn9629/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/CMakeLists.txt slicer-3.4.0~svn9679/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -27,6 +27,11 @@
  
  set(Slicer3_HOME "${Slicer3_BINARY_DIR}")
@@ -194,9 +194,20 @@
  
  configure_file(
    ${Slicer3_SOURCE_DIR}/launch.tcl.in
-diff -urNad slicer-3.4.0~svn9629~/Libs/FreeSurfer/CMakeLists.txt slicer-3.4.0~svn9629/Libs/FreeSurfer/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/FreeSurfer/CMakeLists.txt	2008-05-21 19:25:36.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/FreeSurfer/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/CMakeLists.txt slicer-3.4.0~svn9679/Libs/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
+@@ -1,7 +1,6 @@
+ project(SlicerLibs)
+ 
+ set(dirs
+-  tclap
+   ModuleDescriptionParser
+   GenerateCLP
+   LoadableModule
+diff -urNad slicer-3.4.0~svn9679~/Libs/FreeSurfer/CMakeLists.txt slicer-3.4.0~svn9679/Libs/FreeSurfer/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/FreeSurfer/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/FreeSurfer/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -68,9 +68,14 @@
    vtkIOTCL
    )
@@ -213,9 +224,45 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/IGT/CMakeLists.txt slicer-3.4.0~svn9629/Libs/IGT/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/IGT/CMakeLists.txt	2008-05-21 19:25:36.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/IGT/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/GenerateCLP/CMakeLists.txt slicer-3.4.0~svn9679/Libs/GenerateCLP/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/GenerateCLP/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/GenerateCLP/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
+@@ -11,10 +11,10 @@
+   include(${ModuleDescriptionParser_USE_FILE})
+ endif(ModuleDescriptionParser_FOUND)
+ 
+-find_package(TCLAP REQUIRED)
+-if(TCLAP_FOUND)
+-  include(${TCLAP_USE_FILE})
+-endif(TCLAP_FOUND)
++#find_package(TCLAP REQUIRED)
++#if(TCLAP_FOUND)
++#  include(${TCLAP_USE_FILE})
++#endif(TCLAP_FOUND)
+ 
+ find_package(ITK REQUIRED)
+ if(ITK_FOUND)
+diff -urNad slicer-3.4.0~svn9679~/Libs/GenerateCLP/UseGenerateCLP.cmake.in slicer-3.4.0~svn9679/Libs/GenerateCLP/UseGenerateCLP.cmake.in
+--- slicer-3.4.0~svn9679~/Libs/GenerateCLP/UseGenerateCLP.cmake.in	2008-05-26 11:07:36.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/GenerateCLP/UseGenerateCLP.cmake.in	2009-06-10 23:36:05.000000000 -0400
+@@ -5,10 +5,10 @@
+   message(FATAL_ERROR "Cannot build without ITK. Please set ITK_DIR.")
+ endif(ITK_FOUND)
+ 
+-find_package(TCLAP REQUIRED)
+-if(TCLAP_FOUND)
+-  include(${TCLAP_USE_FILE})
+-endif(TCLAP_FOUND)
++#find_package(TCLAP REQUIRED)
++#if(TCLAP_FOUND)
++#  include(${TCLAP_USE_FILE})
++#endif(TCLAP_FOUND)
+ 
+ find_package(ModuleDescriptionParser REQUIRED)
+ if(ModuleDescriptionParser_FOUND)
+diff -urNad slicer-3.4.0~svn9679~/Libs/IGT/CMakeLists.txt slicer-3.4.0~svn9679/Libs/IGT/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/IGT/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/IGT/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -139,9 +139,14 @@
    ${TRACKING_INTERFACE_LIB}
    )
@@ -232,9 +279,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/ITKCommandIO/CMakeLists.txt slicer-3.4.0~svn9629/Libs/ITKCommandIO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/ITKCommandIO/CMakeLists.txt	2008-05-28 00:38:39.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/ITKCommandIO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/ITKCommandIO/CMakeLists.txt slicer-3.4.0~svn9679/Libs/ITKCommandIO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/ITKCommandIO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/ITKCommandIO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -71,9 +71,14 @@
    ITKIO
    )
@@ -251,9 +298,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/LoadableModule/CMakeLists.txt slicer-3.4.0~svn9629/Libs/LoadableModule/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/LoadableModule/CMakeLists.txt	2009-02-11 17:48:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Libs/LoadableModule/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/LoadableModule/CMakeLists.txt slicer-3.4.0~svn9679/Libs/LoadableModule/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/LoadableModule/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/LoadableModule/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -116,9 +116,14 @@
  
  target_link_libraries(${lib_name} ${link_libs})
@@ -270,9 +317,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/MGHImageIO/CMakeLists.txt slicer-3.4.0~svn9629/Libs/MGHImageIO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/MGHImageIO/CMakeLists.txt	2008-05-28 00:38:39.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/MGHImageIO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/MGHImageIO/CMakeLists.txt slicer-3.4.0~svn9679/Libs/MGHImageIO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/MGHImageIO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/MGHImageIO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -59,9 +59,14 @@
    ITKIO 
  )
@@ -289,9 +336,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/MRML/CMakeLists.txt slicer-3.4.0~svn9629/Libs/MRML/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/MRML/CMakeLists.txt	2009-02-27 17:28:47.000000000 -0500
-+++ slicer-3.4.0~svn9629/Libs/MRML/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/MRML/CMakeLists.txt slicer-3.4.0~svn9679/Libs/MRML/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/MRML/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/MRML/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -237,9 +237,14 @@
    endif(MRML_USE_vtkTeem)
  endif(MRML_USE_Teem)
@@ -308,9 +355,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/MRMLIDImageIO/CMakeLists.txt slicer-3.4.0~svn9629/Libs/MRMLIDImageIO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/MRMLIDImageIO/CMakeLists.txt	2008-05-28 00:38:39.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/MRMLIDImageIO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/MRMLIDImageIO/CMakeLists.txt slicer-3.4.0~svn9679/Libs/MRMLIDImageIO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/MRMLIDImageIO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/MRMLIDImageIO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -78,9 +78,14 @@
    vtkImaging
  )
@@ -327,9 +374,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/ModuleDescriptionParser/CMakeLists.txt slicer-3.4.0~svn9629/Libs/ModuleDescriptionParser/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/ModuleDescriptionParser/CMakeLists.txt	2009-02-11 17:48:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Libs/ModuleDescriptionParser/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/ModuleDescriptionParser/CMakeLists.txt slicer-3.4.0~svn9679/Libs/ModuleDescriptionParser/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/ModuleDescriptionParser/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/ModuleDescriptionParser/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -120,9 +120,14 @@
  
  target_link_libraries(${lib_name} ${link_libs})
@@ -346,9 +393,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/Qdec/CMakeLists.txt slicer-3.4.0~svn9629/Libs/Qdec/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/Qdec/CMakeLists.txt	2008-05-31 13:31:15.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/Qdec/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/Qdec/CMakeLists.txt slicer-3.4.0~svn9679/Libs/Qdec/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/Qdec/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/Qdec/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -76,9 +76,14 @@
    #  vtkIOTCL
    )
@@ -365,9 +412,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/Qdec/QdecContrast.cpp slicer-3.4.0~svn9629/Libs/Qdec/QdecContrast.cpp
---- slicer-3.4.0~svn9629~/Libs/Qdec/QdecContrast.cpp	2009-05-19 18:25:04.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/Qdec/QdecContrast.cpp	2009-05-30 14:23:48.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/Qdec/QdecContrast.cpp slicer-3.4.0~svn9679/Libs/Qdec/QdecContrast.cpp
+--- slicer-3.4.0~svn9679~/Libs/Qdec/QdecContrast.cpp	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/Qdec/QdecContrast.cpp	2009-06-10 23:35:45.000000000 -0400
 @@ -16,6 +16,7 @@
  #include <errno.h>
  #include <sys/stat.h>
@@ -376,9 +423,9 @@
  
  #include "QdecContrast.h"
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/RemoteIO/CMakeLists.txt slicer-3.4.0~svn9629/Libs/RemoteIO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/RemoteIO/CMakeLists.txt	2008-10-10 10:41:24.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/RemoteIO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/RemoteIO/CMakeLists.txt slicer-3.4.0~svn9679/Libs/RemoteIO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/RemoteIO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/RemoteIO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -11,8 +11,11 @@
  find_package(ITK REQUIRED)
  include(${ITK_USE_FILE})
@@ -414,9 +461,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/RemoteIO/vtkHTTPHandler.h slicer-3.4.0~svn9629/Libs/RemoteIO/vtkHTTPHandler.h
---- slicer-3.4.0~svn9629~/Libs/RemoteIO/vtkHTTPHandler.h	2008-10-10 10:41:24.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/RemoteIO/vtkHTTPHandler.h	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/RemoteIO/vtkHTTPHandler.h slicer-3.4.0~svn9679/Libs/RemoteIO/vtkHTTPHandler.h
+--- slicer-3.4.0~svn9679~/Libs/RemoteIO/vtkHTTPHandler.h	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/RemoteIO/vtkHTTPHandler.h	2009-06-10 23:35:45.000000000 -0400
 @@ -5,7 +5,7 @@
  #pragma warning ( disable : 4786 )
  #endif
@@ -426,9 +473,9 @@
  
  #include <vtkRemoteIOConfigure.h>
  #include "vtkRemoteIO.h"
-diff -urNad slicer-3.4.0~svn9629~/Libs/SlicerIO/CMakeLists.txt slicer-3.4.0~svn9629/Libs/SlicerIO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/SlicerIO/CMakeLists.txt	2008-05-21 19:25:36.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/SlicerIO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/SlicerIO/CMakeLists.txt slicer-3.4.0~svn9679/Libs/SlicerIO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/SlicerIO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/SlicerIO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -48,7 +48,7 @@
  
  install(TARGETS ${lib_name}
@@ -438,24 +485,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/tclap/CMakeLists.txt slicer-3.4.0~svn9629/Libs/tclap/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/tclap/CMakeLists.txt	2008-06-25 09:17:35.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/tclap/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
-@@ -13,10 +13,9 @@
- 
- 
- file(GLOB __files1 "${TCLAP_SOURCE_DIR}/include/tclap/*.h")
--# Note "COPYING" is a filename containing the license file
-+
- install(FILES 
-   ${__files1} 
--  COPYING
-   DESTINATION include/tclap COMPONENT Development
-   )
- 
-diff -urNad slicer-3.4.0~svn9629~/Libs/vtkITK/CMakeLists.txt slicer-3.4.0~svn9629/Libs/vtkITK/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/vtkITK/CMakeLists.txt	2009-03-25 19:01:37.000000000 -0400
-+++ slicer-3.4.0~svn9629/Libs/vtkITK/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/vtkITK/CMakeLists.txt slicer-3.4.0~svn9679/Libs/vtkITK/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/vtkITK/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/vtkITK/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -111,9 +111,14 @@
    ITKDICOMParser
    )
@@ -472,9 +504,9 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Libs/vtkTeem/CMakeLists.txt slicer-3.4.0~svn9629/Libs/vtkTeem/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Libs/vtkTeem/CMakeLists.txt	2008-11-05 18:39:51.000000000 -0500
-+++ slicer-3.4.0~svn9629/Libs/vtkTeem/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Libs/vtkTeem/CMakeLists.txt slicer-3.4.0~svn9679/Libs/vtkTeem/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Libs/vtkTeem/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Libs/vtkTeem/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -111,9 +111,14 @@
    ${Teem_LIBRARIES}
    )
@@ -491,9 +523,21 @@
    ARCHIVE DESTINATION lib/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/ChangeTracker/CMakeLists.txt slicer-3.4.0~svn9629/Modules/ChangeTracker/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/ChangeTracker/CMakeLists.txt	2009-04-30 13:59:22.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/ChangeTracker/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/CMakeLists.txt slicer-3.4.0~svn9679/Modules/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
+@@ -74,7 +74,7 @@
+   subdirs(
+     OpenIGTLinkIF
+     NeuroNav
+-    ProstateNav
++#    ProstateNav
+     )
+ endif(Slicer3_USE_OPENIGTLINK)
+ 
+diff -urNad slicer-3.4.0~svn9679~/Modules/ChangeTracker/CMakeLists.txt slicer-3.4.0~svn9679/Modules/ChangeTracker/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/ChangeTracker/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/ChangeTracker/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -40,8 +40,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -515,9 +559,9 @@
  target_link_libraries(${lib_name}
    ${Slicer3_Libs_LIBRARIES}
    ${Slicer3_Base_LIBRARIES}
-diff -urNad slicer-3.4.0~svn9629~/Modules/CommandLineModule/CMakeLists.txt slicer-3.4.0~svn9629/Modules/CommandLineModule/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/CommandLineModule/CMakeLists.txt	2009-02-11 17:48:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/CommandLineModule/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/CommandLineModule/CMakeLists.txt slicer-3.4.0~svn9679/Modules/CommandLineModule/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/CommandLineModule/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/CommandLineModule/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -539,9 +583,9 @@
  # Python settings
  
  if(Slicer3_USE_PYTHON)
-diff -urNad slicer-3.4.0~svn9629~/Modules/EMSegment/CMakeLists.txt slicer-3.4.0~svn9629/Modules/EMSegment/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/EMSegment/CMakeLists.txt	2008-05-27 18:44:06.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/EMSegment/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/EMSegment/CMakeLists.txt slicer-3.4.0~svn9679/Modules/EMSegment/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/EMSegment/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/EMSegment/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -44,8 +44,6 @@
    "${CMAKE_CURRENT_SOURCE_DIR}/Registration/*.h"
    )
@@ -563,9 +607,9 @@
  slicer3_install_modules(${lib_name})
  
  # --------------------------------------------------------------------------
-diff -urNad slicer-3.4.0~svn9629~/Modules/FetchMI/CMakeLists.txt slicer-3.4.0~svn9629/Modules/FetchMI/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/FetchMI/CMakeLists.txt	2009-02-26 14:03:13.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/FetchMI/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/FetchMI/CMakeLists.txt slicer-3.4.0~svn9679/Modules/FetchMI/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/FetchMI/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/FetchMI/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -33,8 +33,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -575,9 +619,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt slicer-3.4.0~svn9629/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt	2008-11-21 00:20:51.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt slicer-3.4.0~svn9679/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -587,9 +631,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/Adapter/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/Adapter/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/Adapter/CMakeLists.txt	2008-12-11 12:55:09.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/Adapter/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/Adapter/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/Adapter/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/Adapter/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/Adapter/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -58,6 +58,11 @@
    ITKAlgorithms
    )
@@ -602,9 +646,9 @@
  install(TARGETS ${LIB_NAME}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/BuildingBlock/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/BuildingBlock/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/BuildingBlock/CMakeLists.txt	2008-12-11 12:55:09.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/BuildingBlock/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/BuildingBlock/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/BuildingBlock/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/BuildingBlock/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/BuildingBlock/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -173,6 +173,11 @@
    ITKIO
    ITKAlgorithms
@@ -617,9 +661,9 @@
   
  
  #CONFIGURE_FILE(
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/Common/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/Common/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/Common/CMakeLists.txt	2008-12-24 10:07:19.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/Common/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/Common/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/Common/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/Common/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/Common/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -156,6 +156,12 @@
    MRML
    )
@@ -633,9 +677,9 @@
  install(TARGETS ${LIB_NAME}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/Filter/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/Filter/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/Filter/CMakeLists.txt	2008-12-24 10:07:19.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/Filter/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/Filter/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/Filter/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/Filter/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/Filter/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -102,6 +102,11 @@
    ${KWWidgets_LIBRARIES}
    )
@@ -648,9 +692,9 @@
  install(TARGETS ${LIB_NAME}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/IA_FEMesh/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/IA_FEMesh/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/IA_FEMesh/CMakeLists.txt	2008-12-10 09:36:48.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/IA_FEMesh/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/IA_FEMesh/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/IA_FEMesh/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/IA_FEMesh/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/IA_FEMesh/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -44,8 +44,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -660,9 +704,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
    
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/IO/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/IO/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/IO/CMakeLists.txt	2008-12-11 12:55:09.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/IO/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/IO/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/IO/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/IO/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/IO/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -60,6 +60,11 @@
    vtkRendering
    )
@@ -675,9 +719,9 @@
  install(TARGETS ${LIB_NAME}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
    LIBRARY DESTINATION ${Slicer3_INSTALL_LIB_DIR} COMPONENT RuntimeLibraries
-diff -urNad slicer-3.4.0~svn9629~/Modules/Meshing/Widgets/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Meshing/Widgets/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Meshing/Widgets/CMakeLists.txt	2008-12-11 12:55:09.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Meshing/Widgets/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Meshing/Widgets/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Meshing/Widgets/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Meshing/Widgets/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Meshing/Widgets/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -107,6 +107,11 @@
    mimxFilter
    mimxCommon
@@ -690,9 +734,9 @@
    
  install(TARGETS ${LIB_NAME}
    RUNTIME DESTINATION ${Slicer3_INSTALL_BIN_DIR} COMPONENT RuntimeLibraries 
-diff -urNad slicer-3.4.0~svn9629~/Modules/NeuroNav/CMakeLists.txt slicer-3.4.0~svn9629/Modules/NeuroNav/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/NeuroNav/CMakeLists.txt	2008-09-12 13:39:46.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/NeuroNav/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/NeuroNav/CMakeLists.txt slicer-3.4.0~svn9679/Modules/NeuroNav/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/NeuroNav/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/NeuroNav/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -40,8 +40,6 @@
    "${CMAKE_CURRENT_SOURCE_DIR}/*.h"
    )
@@ -702,9 +746,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/OpenIGTLinkIF/CMakeLists.txt slicer-3.4.0~svn9629/Modules/OpenIGTLinkIF/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/OpenIGTLinkIF/CMakeLists.txt	2008-12-09 16:36:04.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/OpenIGTLinkIF/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/OpenIGTLinkIF/CMakeLists.txt slicer-3.4.0~svn9679/Modules/OpenIGTLinkIF/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/OpenIGTLinkIF/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/OpenIGTLinkIF/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -40,8 +40,6 @@
    )
  
@@ -725,10 +769,10 @@
  
  target_link_libraries(${lib_name}
    ${Slicer3_Libs_LIBRARIES}
-diff -urNad slicer-3.4.0~svn9629~/Modules/ProstateNav/CMakeLists.txt slicer-3.4.0~svn9629/Modules/ProstateNav/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/ProstateNav/CMakeLists.txt	2009-02-05 22:44:59.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/ProstateNav/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
-@@ -17,6 +17,8 @@
+diff -urNad slicer-3.4.0~svn9679~/Modules/ProstateNav/CMakeLists.txt slicer-3.4.0~svn9679/Modules/ProstateNav/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/ProstateNav/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/ProstateNav/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
+@@ -17,12 +17,16 @@
  
  # --------------------------------------------------------------------------
  # Include dirs
@@ -737,9 +781,78 @@
  
  
  #
-diff -urNad slicer-3.4.0~svn9629~/Modules/QdecModule/CMakeLists.txt slicer-3.4.0~svn9629/Modules/QdecModule/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/QdecModule/CMakeLists.txt	2008-11-21 00:20:51.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/QdecModule/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+ # Include dirs
+ #
+ 
++include_directories( /usr/include/newmat )
++
+ 
+ include_directories(
+   ${CMAKE_CURRENT_SOURCE_DIR}
+@@ -82,32 +86,9 @@
+   ${CMAKE_CURRENT_SOURCE_DIR}/igtlHeaderMessage.cxx
+   ${CMAKE_CURRENT_SOURCE_DIR}/igtlMoveToMessage.cxx
+   ${CMAKE_CURRENT_SOURCE_DIR}/igtlSetZFrameMessage.cxx
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat9.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmatrm.cpp
+   ${CMAKE_CURRENT_SOURCE_DIR}/newmat/nm_misc.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/bandmat.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat1.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/solution.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/cholesky.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/hholder.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat2.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmatex.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat3.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/sort.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/evalue.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/jacobi.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat4.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/submat.cpp
+   ${CMAKE_CURRENT_SOURCE_DIR}/newmat/example.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat5.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/svd.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/myexcept.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat6.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmatnl.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/fft.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat7.cpp
+   ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newfft.cpp
+-  ${CMAKE_CURRENT_SOURCE_DIR}/newmat/newmat8.cpp
+   ${CMAKE_CURRENT_SOURCE_DIR}/newmat/ZLinAlg.cxx
+ )
+ 
+diff -urNad slicer-3.4.0~svn9679~/Modules/ProstateNav/Wizard/vtkProstateNavCalibrationStep.h slicer-3.4.0~svn9679/Modules/ProstateNav/Wizard/vtkProstateNavCalibrationStep.h
+--- slicer-3.4.0~svn9679~/Modules/ProstateNav/Wizard/vtkProstateNavCalibrationStep.h	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/ProstateNav/Wizard/vtkProstateNavCalibrationStep.h	2009-06-10 23:35:45.000000000 -0400
+@@ -37,6 +37,13 @@
+ class VTK_PROSTATENAV_EXPORT vtkProstateNavCalibrationStep : public vtkProstateNavStep
+ {
+ public:
++  //BTX
++  typedef NEWMAT::Matrix Matrix;
++  typedef NEWMAT::Real Real;
++  typedef NEWMAT::FFT2 FFT2;
++  typedef NEWMAT::FFT2I FFT2I;
++  //ETX
++
+   static vtkProstateNavCalibrationStep *New();
+   vtkTypeRevisionMacro(vtkProstateNavCalibrationStep,vtkProstateNavStep);
+   void PrintSelf(ostream& os, vtkIndent indent);
+diff -urNad slicer-3.4.0~svn9679~/Modules/ProstateNav/newmat/ZLinAlg.h slicer-3.4.0~svn9679/Modules/ProstateNav/newmat/ZLinAlg.h
+--- slicer-3.4.0~svn9679~/Modules/ProstateNav/newmat/ZLinAlg.h	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/ProstateNav/newmat/ZLinAlg.h	2009-06-10 23:35:45.000000000 -0400
+@@ -17,6 +17,7 @@
+ #define _ZLINALG_H
+ 
+ #include "math.h"
++#include <cstdio>
+ #include <iostream>
+ //#include "ZLogger.h"
+ 
+diff -urNad slicer-3.4.0~svn9679~/Modules/QdecModule/CMakeLists.txt slicer-3.4.0~svn9679/Modules/QdecModule/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/QdecModule/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/QdecModule/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -761,9 +874,9 @@
  slicer3_install_modules(${lib_name})
  
  # --------------------------------------------------------------------------
-diff -urNad slicer-3.4.0~svn9629~/Modules/QueryAtlas/CMakeLists.txt slicer-3.4.0~svn9629/Modules/QueryAtlas/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/QueryAtlas/CMakeLists.txt	2008-11-21 00:20:51.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/QueryAtlas/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/QueryAtlas/CMakeLists.txt slicer-3.4.0~svn9679/Modules/QueryAtlas/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/QueryAtlas/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/QueryAtlas/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -42,14 +42,11 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -805,9 +918,9 @@
 +#    DESTINATION ${Slicer3_INSTALL_MODULES_LIB_DIR}/${PROJECT_NAME}/${path} COMPONENT Development
 +#    ) 
 +#endforeach(file)
-diff -urNad slicer-3.4.0~svn9629~/Modules/RealTimeImaging/CMakeLists.txt slicer-3.4.0~svn9629/Modules/RealTimeImaging/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/RealTimeImaging/CMakeLists.txt	2008-05-27 18:44:06.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/RealTimeImaging/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/RealTimeImaging/CMakeLists.txt slicer-3.4.0~svn9679/Modules/RealTimeImaging/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/RealTimeImaging/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/RealTimeImaging/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -32,7 +32,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -816,9 +929,9 @@
    "${CMAKE_CURRENT_BINARY_DIR}/vtkRealTimeImagingConfigure.h"
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
-diff -urNad slicer-3.4.0~svn9629~/Modules/ScriptedModule/CMakeLists.txt slicer-3.4.0~svn9629/Modules/ScriptedModule/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/ScriptedModule/CMakeLists.txt	2009-02-11 17:48:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/ScriptedModule/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/ScriptedModule/CMakeLists.txt slicer-3.4.0~svn9679/Modules/ScriptedModule/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/ScriptedModule/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/ScriptedModule/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -840,9 +953,9 @@
  # Python settings
  
  if(Slicer3_USE_PYTHON)
-diff -urNad slicer-3.4.0~svn9629~/Modules/SlicerDaemon/CMakeLists.txt slicer-3.4.0~svn9629/Modules/SlicerDaemon/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/SlicerDaemon/CMakeLists.txt	2008-12-08 04:31:27.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/SlicerDaemon/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/SlicerDaemon/CMakeLists.txt slicer-3.4.0~svn9679/Modules/SlicerDaemon/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/SlicerDaemon/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/SlicerDaemon/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -864,9 +977,9 @@
  slicer3_install_modules(${lib_name})
  
  # --------------------------------------------------------------------------
-diff -urNad slicer-3.4.0~svn9629~/Modules/SlicerWelcome/CMakeLists.txt slicer-3.4.0~svn9629/Modules/SlicerWelcome/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/SlicerWelcome/CMakeLists.txt	2009-03-27 15:12:39.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/SlicerWelcome/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/SlicerWelcome/CMakeLists.txt slicer-3.4.0~svn9679/Modules/SlicerWelcome/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/SlicerWelcome/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/SlicerWelcome/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -37,8 +37,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -876,9 +989,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/Statistics/LabelStatistics/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Statistics/LabelStatistics/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Statistics/LabelStatistics/CMakeLists.txt	2008-05-27 18:44:06.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/Statistics/LabelStatistics/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Statistics/LabelStatistics/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Statistics/LabelStatistics/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Statistics/LabelStatistics/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Statistics/LabelStatistics/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -888,9 +1001,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/Tractography/Display/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Tractography/Display/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Tractography/Display/CMakeLists.txt	2008-07-10 22:39:00.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/Tractography/Display/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Tractography/Display/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Tractography/Display/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Tractography/Display/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Tractography/Display/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,14 +31,11 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -906,9 +1019,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME}/Resources COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/Tractography/FiducialSeeding/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Tractography/FiducialSeeding/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Tractography/FiducialSeeding/CMakeLists.txt	2008-07-30 19:34:00.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/Tractography/FiducialSeeding/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Tractography/FiducialSeeding/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Tractography/FiducialSeeding/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Tractography/FiducialSeeding/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Tractography/FiducialSeeding/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -930,9 +1043,9 @@
  slicer3_install_modules(${lib_name})
  
  # --------------------------------------------------------------------------
-diff -urNad slicer-3.4.0~svn9629~/Modules/Tractography/Seeding/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Tractography/Seeding/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Tractography/Seeding/CMakeLists.txt	2008-05-27 18:44:06.000000000 -0400
-+++ slicer-3.4.0~svn9629/Modules/Tractography/Seeding/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Tractography/Seeding/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Tractography/Seeding/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Tractography/Seeding/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Tractography/Seeding/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -942,9 +1055,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/VolumeRendering/CMakeLists.txt slicer-3.4.0~svn9629/Modules/VolumeRendering/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/VolumeRendering/CMakeLists.txt	2009-01-20 16:30:19.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/VolumeRendering/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/VolumeRendering/CMakeLists.txt slicer-3.4.0~svn9679/Modules/VolumeRendering/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/VolumeRendering/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/VolumeRendering/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -33,8 +33,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -954,9 +1067,9 @@
    DESTINATION ${Slicer3_INSTALL_MODULES_INCLUDE_DIR}/${PROJECT_NAME} COMPONENT Development
    )
  
-diff -urNad slicer-3.4.0~svn9629~/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt slicer-3.4.0~svn9629/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt	2009-01-07 14:02:39.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt slicer-3.4.0~svn9679/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/VolumeRendering/VolumeRenderingReplacements/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -31,8 +31,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
@@ -976,9 +1089,9 @@
 +)
 +
  slicer3_install_modules(${lib_name})
-diff -urNad slicer-3.4.0~svn9629~/Modules/Volumes/CMakeLists.txt slicer-3.4.0~svn9629/Modules/Volumes/CMakeLists.txt
---- slicer-3.4.0~svn9629~/Modules/Volumes/CMakeLists.txt	2009-01-20 17:30:16.000000000 -0500
-+++ slicer-3.4.0~svn9629/Modules/Volumes/CMakeLists.txt	2009-05-30 14:23:06.000000000 -0400
+diff -urNad slicer-3.4.0~svn9679~/Modules/Volumes/CMakeLists.txt slicer-3.4.0~svn9679/Modules/Volumes/CMakeLists.txt
+--- slicer-3.4.0~svn9679~/Modules/Volumes/CMakeLists.txt	2009-06-10 23:35:32.000000000 -0400
++++ slicer-3.4.0~svn9679/Modules/Volumes/CMakeLists.txt	2009-06-10 23:35:45.000000000 -0400
 @@ -37,8 +37,6 @@
  
  file(GLOB headers "${CMAKE_CURRENT_SOURCE_DIR}/*.h")

Modified: packages/slicer/trunk/debian/rules
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/rules?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/rules (original)
+++ packages/slicer/trunk/debian/rules Thu Jun 11 14:15:30 2009
@@ -149,6 +149,7 @@
 	dh_installexamples -a
 	dh_lintian -a
 	dh_installman -a
+	dh_installmenu -a
 	dh_link -a
 	dh_strip -a
 	dh_compress -a

Modified: packages/slicer/trunk/debian/watch
URL: http://svn.debian.org/wsvn/debian-science/packages/slicer/trunk/debian/watch?rev=35760&op=diff
==============================================================================
--- packages/slicer/trunk/debian/watch (original)
+++ packages/slicer/trunk/debian/watch Thu Jun 11 14:15:30 2009
@@ -1,4 +1,4 @@
 version=3
-opts=uversionmangle=s/^/3.3.0~svn/,filenamemangle=s/.*rev=(\d+)&.*/slicer_3.3.0~svn$1.orig.tar.gz/ \
+opts=uversionmangle=s/^/3.4.0~svn/,filenamemangle=s/.*rev=(\d+)&.*/slicer_3.4.0~svn$1.orig.tar.gz/ \
 http://viewvc.slicer.org/viewcvs.cgi/branches/Slicer-3-4/ ^/viewcvs.cgi\?rev=(\d+)&view=rev$ \
         debian /bin/sh debian/get-orig-source




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