[h5py] 01/01: Imported Upstream version 2.4.0
Ghislain Vaillant
ghisvail-guest at moszumanska.debian.org
Wed Apr 1 07:17:39 UTC 2015
This is an automated email from the git hooks/post-receive script.
ghisvail-guest pushed a commit to branch upstream/latest
in repository h5py.
commit 10ba721c6ba78f3975d479ce56c766947a88f300
Author: Ghislain Antony Vaillant <ghisvail at gmail.com>
Date: Tue Mar 31 23:36:06 2015 +0100
Imported Upstream version 2.4.0
---
ANN.rst | 77 +-
MANIFEST.in | 15 +-
PKG-INFO | 9 +-
README.rst | 71 +-
api_gen.py | 271 +-
configure.py | 197 -
PKG-INFO => h5py.egg-info/PKG-INFO | 9 +-
h5py.egg-info/SOURCES.txt | 121 +
h5py.egg-info/dependency_links.txt | 1 +
h5py.egg-info/requires.txt | 2 +
h5py.egg-info/top_level.txt | 1 +
h5py/__init__.py | 17 +-
h5py/_conv.c | 6014 --
h5py/_conv.pyx | 228 +-
h5py/_errors.c | 3254 -
h5py/_errors.pyx | 40 +-
h5py/_hdf5.pxd | 95 +-
h5py/_hl/attrs.py | 104 +-
h5py/_hl/base.py | 93 +-
h5py/_hl/dataset.py | 172 +-
h5py/_hl/datatype.py | 5 +-
h5py/_hl/dims.py | 52 +-
h5py/_hl/files.py | 107 +-
h5py/_hl/filters.py | 7 +-
h5py/_hl/group.py | 264 +-
h5py/_hl/selections2.py | 21 -
h5py/_hl/tests/__init__.py | 8 -
h5py/_locks.pxi | 8 +
h5py/_objects.c | 6678 --
h5py/_objects.pxd | 2 +-
h5py/_objects.pyx | 451 +-
h5py/_proxy.c | 4484 -
h5py/_proxy.pyx | 42 +-
h5py/api_compat.h | 5 +
h5py/api_functions.txt | 544 +-
h5py/config.pxi | 4 -
h5py/defs.c | 81484 -------------------
h5py/defs.pxd | 338 -
h5py/defs.pyx | 2960 -
h5py/h5.c | 5480 --
h5py/h5.pyx | 69 +-
h5py/h5a.c | 7487 --
h5py/h5a.pyx | 54 +-
h5py/h5ac.c | 5137 --
h5py/h5d.c | 6009 --
h5py/h5d.pyx | 71 +-
h5py/h5ds.c | 4142 -
h5py/h5ds.pyx | 14 +-
h5py/h5f.c | 6655 --
h5py/h5f.pyx | 62 +-
h5py/h5fd.c | 1910 -
h5py/h5fd.pxd | 2 +-
h5py/h5fd.pyx | 2 +-
h5py/h5g.c | 7629 --
h5py/h5g.pyx | 144 +-
h5py/h5i.c | 3566 -
h5py/h5i.pyx | 23 +-
h5py/h5l.c | 5584 --
h5py/h5l.pyx | 21 +-
h5py/h5o.c | 7518 --
h5py/h5o.pyx | 26 +-
h5py/h5p.c | 13550 ---
h5py/h5p.pyx | 190 +-
h5py/h5r.c | 4111 -
h5py/h5r.pyx | 13 +-
h5py/h5s.c | 6842 --
h5py/h5s.pyx | 74 +-
h5py/h5t.c | 21701 -----
h5py/h5t.pxd | 1 +
h5py/h5t.pyx | 303 +-
h5py/h5z.c | 2210 -
h5py/h5z.pyx | 6 +-
h5py/ipy_completer.py | 24 +-
h5py/lowtest/__init__.py | 8 -
h5py/tests/__init__.py | 41 +
h5py/{_hl => }/tests/common.py | 102 +-
h5py/tests/hl/__init__.py | 7 +
h5py/tests/hl/test_dataset_getitem.py | 405 +
h5py/tests/hl/test_dims_dimensionproxy.py | 24 +
h5py/tests/hl/test_file.py | 67 +
h5py/tests/old/__init__.py | 31 +
h5py/{_hl/tests => tests/old}/common.py | 0
h5py/{_hl/tests => tests/old}/test_attrs.py | 9 +-
h5py/{_hl/tests => tests/old}/test_attrs_data.py | 0
h5py/{_hl/tests => tests/old}/test_base.py | 0
h5py/{_hl/tests => tests/old}/test_dataset.py | 298 +-
h5py/{_hl/tests => tests/old}/test_datatype.py | 0
.../tests => tests/old}/test_dimension_scales.py | 13 +-
h5py/{_hl/tests => tests/old}/test_file.py | 43 +-
h5py/{_hl/tests => tests/old}/test_group.py | 68 +-
h5py/{lowtest => tests/old}/test_h5.py | 0
h5py/{lowtest => tests/old}/test_h5f.py | 0
h5py/{lowtest => tests/old}/test_h5p.py | 24 +-
h5py/{lowtest => tests/old}/test_h5t.py | 0
h5py/{lowtest => tests/old}/test_objects.py | 0
h5py/{_hl/tests => tests/old}/test_selections.py | 21 -
h5py/{_hl/tests => tests/old}/test_slicing.py | 17 +-
h5py/utils.c | 4252 -
h5py/version.py | 3 +-
lzf/.DS_Store | Bin 0 -> 6148 bytes
lzf/lzf/lzf_c.c | 2 +-
setup.cfg | 5 +
setup.py | 237 +-
setup_build.py | 136 +
setup_configure.py | 229 +
windows/README.txt | 23 +
windows/cacheinit.cmake | 79 +
windows/pavement.py | 86 +
{win_include => windows}/stdint.h | 0
{win_include => windows}/unistd.h | 0
110 files changed, 4023 insertions(+), 221092 deletions(-)
diff --git a/ANN.rst b/ANN.rst
index d968597..a15d730 100644
--- a/ANN.rst
+++ b/ANN.rst
@@ -1,35 +1,64 @@
-Announcing HDF5 for Python (h5py) 2.2.1
-=======================================
+Announcing HDF5 for Python (h5py) 2.4.0
+========================================
-The h5py team is happy to announce the availability of h5py 2.2.1. This
-release fixes a critical bug reported by Jim Parker on December 7th, which
-affects code using HDF5 compound types.
+The h5py team is happy to announce the availability of h5py 2.4.0 (final).
-We recommend that all users of h5py upgrade to avoid crashes or possible
-data corruption.
+What's h5py?
+------------
+The h5py package is a Pythonic interface to the HDF5 binary data format.
-Scope of bug
-------------
+It lets you store huge amounts of numerical data, and easily manipulate
+that data from NumPy. For example, you can slice into multi-terabyte
+datasets stored on disk, as if they were real NumPy arrays. Thousands of
+datasets can be stored in a single file, categorized and tagged however
+you want.
+
+Documentation is at:
+
+http://docs.h5py.org
+
+Changes
+-------
+
+This release incorporates a total re-write of the identifier management
+system in h5py. As part of this refactoring, the entire API is also now
+protected by threading locks. User-visible changes include:
+
+* Files are now automatically closed when all objects within them
+ are unreachable. Previously, if File.close() was not explicitly called,
+ files would remain open and "leaks" were possible if the File object
+ was lost.
+
+* The entire API is now believed to be thread-safe (feedback welcome!).
-The issue may affect code which modifies HDF5 compound types in-place, by
-specifying a field name or names when writing to a dataset:
+* External links now work if the target file is already open. Previously
+ this was not possible because of a mismatch in the file close strengths.
+
+* The options to setup.py have changed; a new top-level "configure"
+ command handles options like --hdf5=/path/to/hdf5 and --mpi. Setup.py
+ now works correctly under Python 3 when these options are used.
+
+* Cython (0.17+) is now required when building from source.
+
+* The minimum NumPy version is now 1.6.1.
->>> dataset['field_name'] = value
+* Various other enhancements and bug fixes
+
+Acknowlegements
+---------------
-Under certain conditions, h5py can supply uninitialized memory to the HDF5
-conversion machinery, leading (in the case reported) to a segmentation fault.
-It is also possible for other fields of the type to be corrupted.
+This release incorporates changes from, among others:
-This issue affects only code which updates a subset of the fields in the
-compound type. Programs reading from a compound type, writing all fields, or
-using other datatypes, are not affected. If you are using code that takes
-advantage of this feature, please double-check your files to ensure your data
-has not been affected.
+* Matthieu Brucher
+* Laurence Hole
+* John Tyree
+* Pierre de Buyl
+* Matthew Brett
+Where to get it
+---------------
-More information
-----------------
+Downloads, documentation, and more are available at the h5py website:
-Github issue: https://github.com/h5py/h5py/issues/372
-Original thread: https://groups.google.com/forum/#!topic/h5py/AbUOZ1MXf3U
+http://www.h5py.org
diff --git a/MANIFEST.in b/MANIFEST.in
index dd2de67..d851840 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -1,11 +1,14 @@
-recursive-include h5py *.c *.h *.pyx *.pxd *.pxi *.py
+recursive-include h5py *.h *.pyx *.pxd *.pxi *.py *.txt
+exclude h5py/defs.pyx
+exclude h5py/defs.pxd
+exclude h5py/config.pxi
recursive-include examples *.py
-recursive-include lzf *.c *.h *.txt
-recursive-include win_include *.c *.h
-recursive-include licenses *.txt
-include h5py/api_functions.txt
+recursive-include lzf *
+recursive-include windows *
+recursive-include licenses *
include MANIFEST.in
-include configure.py
include api_gen.py
+include setup_build.py
+include setup_configure.py
include ANN.rst
include README.rst
diff --git a/PKG-INFO b/PKG-INFO
index b8d44a3..0ed11d1 100644
--- a/PKG-INFO
+++ b/PKG-INFO
@@ -1,12 +1,12 @@
Metadata-Version: 1.1
Name: h5py
-Version: 2.2.1
+Version: 2.4.0
Summary: Read and write HDF5 files from Python
Home-page: http://www.h5py.org
Author: Andrew Collette
Author-email: andrew dot collette at gmail dot com
License: UNKNOWN
-Download-URL: http://code.google.com/p/h5py/downloads/list
+Download-URL: https://pypi.python.org/pypi/h5py
Description:
The h5py package provides both a high- and low-level interface to the HDF5
library from Python. The low-level interface is intended to be a complete
@@ -17,7 +17,7 @@ Description:
data structures and their HDF5 equivalents vastly simplifies the process of
reading and writing data from Python.
- Supports HDF5 versions 1.8.3 and higher. On Windows, HDF5 is included with
+ Supports HDF5 versions 1.8.4 and higher. On Windows, HDF5 is included with
the installer.
Platform: UNKNOWN
@@ -34,4 +34,5 @@ Classifier: Operating System :: Unix
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
-Requires: numpy (>=1.0.1)
+Requires: numpy (>=1.6.1)
+Requires: Cython (>=0.17)
diff --git a/README.rst b/README.rst
index a6e5ee8..7bc1303 100644
--- a/README.rst
+++ b/README.rst
@@ -9,73 +9,44 @@ Websites
* Main website: http://www.h5py.org
* Source code: http://github.com/h5py/h5py
-* Mailing list: h5py at googlegroups
+* Mailing list: https://groups.google.com/d/forum/h5py
+
+For advanced installation options, see http://docs.h5py.org.
Prerequisites
-------------
You need, at a minimum:
-* HDF5 1.8.3 or later on Linux (On Windows, h5py ships with HDF5)
-* Python 2.6, 2.7, 3.2 or 3.3
-* Any modern version of NumPy
+* Python 2.6, 2.7, 3.2, 3.3, or 3.4
+* NumPy 1.6.1 or later
-Optionally:
+To build on UNIX:
-* Cython 0.13 or later, to build from a git checkout
+* HDF5 1.8.4 or later (on Windows, HDF5 comes with h5py)
+* Cython 0.17 or later
* If using Python 2.6, unittest2 is needed to run the tests
-Installing from release tarball
--------------------------------
-
-Run the following commands::
+Installing on Windows
+---------------------
- python setup.py build [--hdf5=/path/to/hdf5]
- python setup.py test # optional
- [sudo] python setup.py install
+Download an installer from http://www.h5py.org and run it.
-Installing via easy_install
----------------------------
+Installing on UNIX
+------------------
-Run the following commands::
+Via pip (recommended)::
- export HDF5_DIR=/path/to/hdf5 # optional
- [sudo] easy_install h5py
+ pip install h5py
-Building from a Git checkout (UNIX)
------------------------------------------
+From a release tarball or Git checkout::
-We have switched development to GitHub. Here's how to build
-h5py from source:
-
-1. Clone the project::
+ python setup.py build
+ python setup.py test # optional
+ [sudo] python setup.py install
- git clone https://github.com/h5py/h5py.git
-
-2. Build the project (this step also auto-compiles the .c files)::
-
- python setup.py build [--hdf5=/path/to/hdf5]
-
-3. Run the unit tests (optional)::
-
- python setup.py test
-
-If you add new functions to api_functions.txt, remember to run the script
-api_gen.py to update the Cython interface. See the developer guide at
-http://www.h5py.org for more information.
-
Reporting bugs
--------------
-* Bug reports are always welcome at the GitHub tracker. Please don't be
- offended if it takes a while to respond to your report... we value user
- input and take all bugs seriously.
-
-* If you're not sure you have a bug, or want to ask any question at all
- about h5py or HDF5, post to the mailing list (h5py at Google Groups).
- This list is read by the main developers of h5py, as well as the user
- community. As a bonus, posting to the list means that other people with
- similar problems can find your question and the responses.
-
-* You're always free to email the author directly at [andrew dot collette
- at gmail dot com].
+Open a bug at http://github.com/h5py/h5py/issues. For general questions, ask
+on the list (https://groups.google.com/d/forum/h5py).
diff --git a/api_gen.py b/api_gen.py
index cec89ed..fbf0d08 100644
--- a/api_gen.py
+++ b/api_gen.py
@@ -1,26 +1,101 @@
-import re
-import warnings
-import os.path as op
-
-class BadLineError(Exception):
- pass
-class UnknownCodeError(Exception):
- pass
+"""
+ Generate the lowest-level Cython bindings to HDF5.
+
+ In order to translate HDF5 errors to exceptions, the raw HDF5 API is
+ wrapped with Cython "error wrappers". These are cdef functions with
+ the same names and signatures as their HDF5 equivalents, but implemented
+ in the h5py.defs extension module.
+
+ The h5py.defs files (defs.pyx and defs.pxd), along with the "real" HDF5
+ function definitions (_hdf5.pxd), are auto-generated by this script from
+ api_functions.txt. This file also contains annotations which indicate
+ whether a function requires a certain minimum version of HDF5, an
+ MPI-aware build of h5py, or special error handling.
+
+ This script is called automatically by the h5py build system when the
+ output files are missing, or api_functions.txt has been updated.
+
+ See the Line class in this module for documentation of the format for
+ api_functions.txt.
+
+ h5py/_hdf5.pxd: Cython "extern" definitions for HDF5 functions
+ h5py/defs.pxd: Cython definitions for error wrappers
+ h5py/defs.pyx: Cython implementations of error wrappers
+"""
+import re
+import os.path as op
-# The following files are used to talk to the HDF5 api:
-#
-# (1) hdf5.pxd: HDF5 function signatures (autogenerated)
-# (2) hdf5_types.pxd: HDF5 type definitions (static)
-# (3) defs.pxd: HDF5 function proxy defs (autogenerated)
-# (4) defs.pyx: HDF5 function proxies (autogenerated)
-function_pattern = r'(?P<mpi>(MPI)[ ]+)?(?P<version>([0-9]\.[0-9]\.[0-9]))?([ ]+)?(?P<code>(unsigned[ ]+)?[a-zA-Z_]+[a-zA-Z0-9_]*\**)[ ]+(?P<fname>[a-zA-Z_]+[a-zA-Z0-9_]*)[ ]*\((?P<sig>[a-zA-Z0-9_,* ]*)\)'
-sig_pattern = r'(unsigned[ ]+)?(?:[a-zA-Z_]+[a-zA-Z0-9_]*\**)[ ]+[ *]*(?P<param>[a-zA-Z_]+[a-zA-Z0-9_]*)'
+class Line(object):
+
+ """
+ Represents one line from the api_functions.txt file.
+
+ Exists to provide the following attributes:
+
+ mpi: Bool indicating if MPI required
+ error: Bool indicating if special error handling required
+ version: None or a minimum-version tuple
+ code: String with function return type
+ fname: String with function name
+ sig: String with raw function signature
+ args: String with sequence of arguments to call function
+
+ Example: MPI ERROR 1.8.12 int foo(char* a, size_t b)
+
+ .mpi: True
+ .error: True
+ .version: (1, 8, 12)
+ .code: "int"
+ .fname: "foo"
+ .sig: "char* a, size_t b"
+ .args: "a, b"
+ """
+
+ PATTERN = re.compile("""(?P<mpi>(MPI)[ ]+)?
+ (?P<error>(ERROR)[ ]+)?
+ (?P<version>([0-9]\.[0-9]\.[0-9]))?
+ ([ ]+)?
+ (?P<code>(unsigned[ ]+)?[a-zA-Z_]+[a-zA-Z0-9_]*\**)[ ]+
+ (?P<fname>[a-zA-Z_]+[a-zA-Z0-9_]*)[ ]*
+ \((?P<sig>[a-zA-Z0-9_,* ]*)\)
+ """, re.VERBOSE)
+
+ SIG_PATTERN = re.compile("""
+ (unsigned[ ]+)?
+ (?:[a-zA-Z_]+[a-zA-Z0-9_]*\**)
+ [ ]+[ *]*
+ (?P<param>[a-zA-Z_]+[a-zA-Z0-9_]*)
+ """, re.VERBOSE)
+
+ def __init__(self, text):
+ """ Break the line into pieces and populate object attributes.
+
+ text: A valid function line, with leading/trailing whitespace stripped.
+ """
+
+ m = self.PATTERN.match(text)
+ if m is None:
+ raise ValueError("Invalid line encountered: {0}".format(text))
+
+ parts = m.groupdict()
+
+ self.mpi = parts['mpi'] is not None
+ self.error = parts['error'] is not None
+ self.version = parts['version']
+ if self.version is not None:
+ self.version = tuple(int(x) for x in self.version.split('.'))
+ self.code = parts['code']
+ self.fname = parts['fname']
+ self.sig = parts['sig']
+
+ self.args = self.SIG_PATTERN.findall(self.sig)
+ if self.args is None:
+ raise ValueError("Invalid function signature: {0}".format(self.sig))
+ self.args = ", ".join(x[1] for x in self.args)
-fp = re.compile(function_pattern)
-sp = re.compile(sig_pattern)
raw_preamble = """\
include "config.pxi"
@@ -45,16 +120,10 @@ from api_types_hdf5 cimport *
cimport _hdf5
from _errors cimport set_exception
-
-include "_locks.pxi"
-
-rlock = FastRLock()
"""
-class FunctionCruncher2(object):
- def __init__(self, stub=False):
- self.stub = stub
+class LineProcessor(object):
def run(self):
@@ -63,136 +132,108 @@ class FunctionCruncher2(object):
# Create output files
self.raw_defs = open(op.join('h5py', '_hdf5.pxd'), 'w')
- self.cython_def = open(op.join('h5py', 'defs.pxd'), 'w')
+ self.cython_defs = open(op.join('h5py', 'defs.pxd'), 'w')
self.cython_imp = open(op.join('h5py', 'defs.pyx'), 'w')
self.raw_defs.write(raw_preamble)
- self.cython_def.write(def_preamble)
+ self.cython_defs.write(def_preamble)
self.cython_imp.write(imp_preamble)
- for line in self.functions:
- if not line or line[0] == '#' or line[0] == '\n':
+ for text in self.functions:
+
+ # Directive specifying a header file
+ if not text.startswith(' ') and not text.startswith('#') and \
+ len(text.strip()) > 0:
+ inc = text.split(':')[0]
+ self.raw_defs.write('cdef extern from "%s.h":\n' % inc)
continue
- try:
- self.handle_line(line)
- except BadLineError:
- raise
- warnings.warn("Skipped <<%s>>" % line)
+
+ text = text.strip()
+ # Whitespace or comment line
+ if len(text) == 0 or text[0] == '#':
+ continue
+
+ # Valid function line
+ self.line = Line(text)
+ self.write_raw_sig()
+ self.write_cython_sig()
+ self.write_cython_imp()
+
self.functions.close()
self.cython_imp.close()
- self.cython_def.close()
+ self.cython_defs.close()
self.raw_defs.close()
- def handle_line(self, line):
- """ Parse a function definition line and output the correct code
- to each of the output files. """
-
- if line.startswith(' '):
- line = line.strip()
- if line.startswith('#'):
- return
-
- m = fp.match(line)
- if m is None:
- raise BadLineError(
- "Signature for line <<%s>> did not match regexp" % line
- )
- function_parts = m.groupdict()
- if function_parts['mpi'] is not None:
- function_parts['mpi'] = True
- if function_parts['version'] is not None:
- function_parts['version'] = tuple(int(x) for x in function_parts['version'].split('.'))
-
- self.raw_defs.write(' '+self.make_raw_sig(function_parts))
- self.cython_def.write(self.make_cython_sig(function_parts))
- self.cython_imp.write(self.make_cython_imp(function_parts))
- else:
- inc = line.split(':')[0]
- self.raw_defs.write('cdef extern from "%s.h":\n' % inc)
-
- def add_cython_if(self, function_parts, block):
+ def add_cython_if(self, block):
""" Wrap a block of code in the required "IF" checks """
+
def wrapif(condition, code):
code = code.replace('\n', '\n ', code.count('\n')-1) # Yes, -1.
- code = "IF %s:\n %s" % (condition, code)
+ code = "IF {0}:\n {1}".format(condition, code)
return code
- if function_parts['mpi']:
+ if self.line.mpi:
block = wrapif('MPI', block)
- if function_parts['version']:
- block = wrapif('HDF5_VERSION >= %s' % (function_parts['version'],), block)
+ if self.line.version is not None:
+ block = wrapif('HDF5_VERSION >= {0.version}'.format(self.line), block)
return block
- def make_raw_sig(self, function_parts):
- """ Build a "cdef extern"-style definition for an HDF5 function """
+ def write_raw_sig(self):
+ """ Write out "cdef extern"-style definition for an HDF5 function """
- raw_sig = "%(code)s %(fname)s(%(sig)s) except *\n" % function_parts
- raw_sig = self.add_cython_if(function_parts, raw_sig)
- return raw_sig
+ raw_sig = "{0.code} {0.fname}({0.sig}) except *\n".format(self.line)
+ raw_sig = self.add_cython_if(raw_sig)
+ raw_sig = "\n".join((" "+x if x.strip() else x) for x in raw_sig.split("\n"))
+ self.raw_defs.write(raw_sig)
- def make_cython_sig(self, function_parts):
- """ Build Cython signature for wrapper function """
+ def write_cython_sig(self):
+ """ Write out Cython signature for wrapper function """
- cython_sig = "cdef %(code)s %(fname)s(%(sig)s) except *\n" % function_parts
- cython_sig = self.add_cython_if(function_parts, cython_sig)
- return cython_sig
+ cython_sig = "cdef {0.code} {0.fname}({0.sig}) except *\n".format(self.line)
+ cython_sig = self.add_cython_if(cython_sig)
+ self.cython_defs.write(cython_sig)
- def make_cython_imp(self, function_parts, stub=False):
- """ Build a Cython wrapper implementation. If stub is True, do
- nothing but call the function and return its value """
+ def write_cython_imp(self):
+ """ Write out Cython wrapper implementation """
- args = sp.findall(function_parts['sig'])
- if args is None:
- raise BadLineError("Can't understand function signature <<%s>>" % function_parts['sig'])
- args = ", ".join(x[1] for x in args)
-
- # Figure out what conditional to use for the error testing
- code = function_parts['code']
- if '*' in code or code in ('H5T_conv_t',):
+ # Figure out what test and return value to use with error reporting
+ if '*' in self.line.code or self.line.code in ('H5T_conv_t',):
condition = "==NULL"
retval = "NULL"
- elif code in ('int', 'herr_t', 'htri_t', 'hid_t','hssize_t','ssize_t') \
- or re.match(r'H5[A-Z]+_[a-zA-Z_]+_t',code):
+ elif self.line.code in ('int', 'herr_t', 'htri_t', 'hid_t','hssize_t','ssize_t') \
+ or re.match(r'H5[A-Z]+_[a-zA-Z_]+_t', self.line.code):
condition = "<0"
retval = "-1"
- elif code in ('unsigned int','haddr_t','hsize_t','size_t'):
+ elif self.line.code in ('unsigned int','haddr_t','hsize_t','size_t'):
condition = "==0"
retval = 0
else:
- raise UnknownCodeError("Return code <<%s>> unknown" % self.code)
-
- parts = function_parts.copy()
- parts.update({'condition': condition, 'retval': retval, 'args': args})
+ raise ValueError("Return code <<%s>> unknown" % self.line.code)
# Have to use except * because Cython can't handle special types here
imp = """\
-cdef %(code)s %(fname)s(%(sig)s) except *:
- cdef %(code)s r
- with rlock:
- r = _hdf5.%(fname)s(%(args)s)
- if r%(condition)s:
- if set_exception():
- return <%(code)s>%(retval)s;
- return r
+cdef {0.code} {0.fname}({0.sig}) except *:
+ cdef {0.code} r
+ r = _hdf5.{0.fname}({0.args})
+ if r{condition}:
+ if set_exception():
+ return <{0.code}>{retval}
+ elif {0.error}:
+ raise RuntimeError("Unspecified error in {0.fname} (return value {condition})")
+ return r
"""
+ imp = imp.format(self.line, condition=condition, retval=retval)
+ imp = self.add_cython_if(imp)
+ self.cython_imp.write(imp)
- stub_imp = """\
-cdef %(code)s %(fname)s(%(sig)s) except *:
- with rlock:
- return hdf5.%(fname)s(%(args)s)
-
-"""
- imp = (stub_imp if self.stub else imp) % parts
- imp = self.add_cython_if(function_parts, imp)
- return imp
+def run():
+ lp = LineProcessor()
+ lp.run()
-def run(stub=False):
- fc = FunctionCruncher2(stub)
- fc.run()
if __name__ == '__main__':
run()
diff --git a/configure.py b/configure.py
deleted file mode 100644
index 16faecb..0000000
--- a/configure.py
+++ /dev/null
@@ -1,197 +0,0 @@
-
-"""
- Implements discovery of environment vars and command-line "superoptions".
-
- Also manages persistence via pickle files.
-
- Currently defined settings (Key: Value):
-
- "hdf5": <path to HDF5>
- "mpi": bool, should we build in mpi mode
- "hdf5_version": 3-tuple (major, minor, release)
-"""
-
-import os, sys
-
-
-def printerr(what):
-
- sys.stderr.write(str(what)+'\n')
- sys.stderr.flush()
-
-
-def loadpickle(name):
- """ Load object from pickle file, or None if it can't be opened """
-
- import pickle
-
- try:
- f = open(name,'r')
- except IOError:
- return None
- try:
- return pickle.load(f)
- except Exception:
- return None
- finally:
- f.close()
-
-
-def savepickle(name, data):
- """ Save to pickle file, ignoring if it can't be written """
- import pickle
- try:
- f = open(name, 'wb')
- except IOError:
- return
- try:
- pickle.dump(data, f)
- finally:
- f.close()
-
-
-def parse_hdf5_version(vers):
- """ Split HDF5 version string X.Y.Z into a tuple. ValueError on failure.
- """
-
- try:
- vers = tuple(int(x) for x in vers.split('.'))
- if len(vers) != 3:
- raise ValueError
- except Exception:
- raise ValueError("Illegal value for HDF5 version")
-
- return vers
-
-
-def scrape_eargs():
- """ Locate settings in environment vars """
-
- settings = {}
-
- hdf5 = os.environ.get("HDF5_DIR", '')
- if hdf5 != '':
- settings['hdf5'] = hdf5
-
- api = os.environ.get("HDF5_API", '')
- if api != '':
- printerr("HDF5_API environment variable ignored (Support for HDF5 1.6 dropped)")
-
- vers = os.environ.get("HDF5_VERSION", '')
- if vers != '':
- try:
- vers = parse_hdf5_version(vers)
- except ValueError:
- printerr("Invalid format for $HDF5_VERSION (must be X.Y.Z)")
- else:
- settings['hdf5_version'] = vers
-
- return settings
-
-def scrape_cargs():
- """ Locate settings in command line or pickle file """
-
- settings = loadpickle('h5py_config.pickle')
- if settings is None: settings = {}
-
- for arg in sys.argv[:]:
-
- if arg.find('--hdf5=') == 0:
- hdf5 = arg.split('=')[-1]
- if hdf5.lower() == 'default':
- settings.pop('hdf5', None)
- else:
- settings['hdf5'] = hdf5
- sys.argv.remove(arg)
-
- if arg.find('--mpi') == 0:
- if arg in ('--mpi','--mpi=yes'):
- settings['mpi'] = True
- elif arg == '--mpi=no':
- settings['mpi'] = False
- else:
- raise ValueError("Invalid option for --mpi (--mpi or --mpi=[yes|no])")
- sys.argv.remove(arg)
-
- if arg.find('--hdf5-version=') == 0:
- vers = arg.split('=')[-1]
- if vers.lower() == 'default':
- settings.pop('hdf5_version', None)
- else:
- try:
- vers = parse_hdf5_version(vers)
- settings['hdf5_version'] = vers
- except ValueError:
- raise ValueError('Illegal option "%s" for --hd5-version (must be "default" or "X.Y.Z")' % vers)
- sys.argv.remove(arg)
-
- if arg.find('--api=') == 0:
- printerr("--api option ignored (Support for HDF5 1.6 dropped)")
- sys.argv.remove(arg)
-
- savepickle('h5py_config.pickle', settings)
- return settings
-
-
-# --- Autodetection of HDF5 library via ctypes --------------------------------
-
-def autodetect(libdirs):
- """
- Detect the current version of HDF5, and return it as a tuple
- (major, minor, release).
-
- If the version can't be determined, prints error information to stderr
- and returns None.
-
- libdirs: list of library paths to search for libhdf5.so. The first one
- which can be successfully loaded will be used.
- """
-
- import os
- import sys
- import os.path as op
- import re
- import ctypes
- from ctypes import byref
-
- if sys.platform.startswith('win'):
- regexp = re.compile('^hdf5.dll$')
- elif sys.platform.startswith('darwin'):
- regexp = re.compile(r'^libhdf5.dylib')
- else:
- regexp = re.compile(r'^libhdf5.so')
-
- try:
- path = None
-
- for d in libdirs:
- try:
- candidates = [x for x in os.listdir(d) if regexp.match(x)]
- if len(candidates) != 0:
- candidates.sort(key=lambda x: len(x)) # Prefer libfoo.so to libfoo.so.X.Y.Z
- path = op.abspath(op.join(d, candidates[0]))
- except Exception:
- pass # We skip invalid entries, because that's what the C compiler does
-
- if path is None:
- path = "libhdf5.so"
-
- lib = ctypes.cdll.LoadLibrary(path)
-
- major = ctypes.c_uint()
- minor = ctypes.c_uint()
- release = ctypes.c_uint()
-
- lib.H5get_libversion(byref(major), byref(minor), byref(release))
-
- vers = (int(major.value), int(minor.value), int(release.value))
-
- printerr("Autodetected HDF5 version %s" % ".".join(str(x) for x in vers))
-
- return vers
-
- except Exception as e:
-
- printerr(e)
- return None
-
diff --git a/PKG-INFO b/h5py.egg-info/PKG-INFO
similarity index 89%
copy from PKG-INFO
copy to h5py.egg-info/PKG-INFO
index b8d44a3..0ed11d1 100644
--- a/PKG-INFO
+++ b/h5py.egg-info/PKG-INFO
@@ -1,12 +1,12 @@
Metadata-Version: 1.1
Name: h5py
-Version: 2.2.1
+Version: 2.4.0
Summary: Read and write HDF5 files from Python
Home-page: http://www.h5py.org
Author: Andrew Collette
Author-email: andrew dot collette at gmail dot com
License: UNKNOWN
-Download-URL: http://code.google.com/p/h5py/downloads/list
+Download-URL: https://pypi.python.org/pypi/h5py
Description:
The h5py package provides both a high- and low-level interface to the HDF5
library from Python. The low-level interface is intended to be a complete
@@ -17,7 +17,7 @@ Description:
data structures and their HDF5 equivalents vastly simplifies the process of
reading and writing data from Python.
- Supports HDF5 versions 1.8.3 and higher. On Windows, HDF5 is included with
+ Supports HDF5 versions 1.8.4 and higher. On Windows, HDF5 is included with
the installer.
Platform: UNKNOWN
@@ -34,4 +34,5 @@ Classifier: Operating System :: Unix
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
-Requires: numpy (>=1.0.1)
+Requires: numpy (>=1.6.1)
+Requires: Cython (>=0.17)
diff --git a/h5py.egg-info/SOURCES.txt b/h5py.egg-info/SOURCES.txt
new file mode 100644
index 0000000..82c1015
--- /dev/null
+++ b/h5py.egg-info/SOURCES.txt
@@ -0,0 +1,121 @@
+ANN.rst
+MANIFEST.in
+README.rst
+api_gen.py
+setup.py
+setup_build.py
+setup_configure.py
+examples/multiprocessing_example.py
+examples/threading_example.py
+h5py/__init__.py
+h5py/_conv.pxd
+h5py/_conv.pyx
+h5py/_errors.pxd
+h5py/_errors.pyx
+h5py/_hdf5.pxd
+h5py/_locks.pxi
+h5py/_objects.pxd
+h5py/_objects.pyx
+h5py/_proxy.pxd
+h5py/_proxy.pyx
+h5py/api_compat.h
+h5py/api_functions.txt
+h5py/api_types_ext.pxd
+h5py/api_types_hdf5.pxd
+h5py/h5.pxd
+h5py/h5.pyx
+h5py/h5a.pxd
+h5py/h5a.pyx
+h5py/h5ac.pxd
+h5py/h5ac.pyx
+h5py/h5d.pxd
+h5py/h5d.pyx
+h5py/h5ds.pxd
+h5py/h5ds.pyx
+h5py/h5f.pxd
+h5py/h5f.pyx
+h5py/h5fd.pxd
+h5py/h5fd.pyx
+h5py/h5g.pxd
+h5py/h5g.pyx
+h5py/h5i.pxd
+h5py/h5i.pyx
+h5py/h5l.pxd
+h5py/h5l.pyx
+h5py/h5o.pxd
+h5py/h5o.pyx
+h5py/h5p.pxd
+h5py/h5p.pyx
+h5py/h5r.pxd
+h5py/h5r.pyx
+h5py/h5s.pxd
+h5py/h5s.pyx
+h5py/h5t.pxd
+h5py/h5t.pyx
+h5py/h5z.pxd
+h5py/h5z.pyx
+h5py/highlevel.py
+h5py/ipy_completer.py
+h5py/numpy.pxd
+h5py/utils.pxd
+h5py/utils.pyx
+h5py/version.py
+h5py.egg-info/PKG-INFO
+h5py.egg-info/SOURCES.txt
+h5py.egg-info/dependency_links.txt
+h5py.egg-info/requires.txt
+h5py.egg-info/top_level.txt
+h5py/_hl/__init__.py
+h5py/_hl/attrs.py
+h5py/_hl/base.py
+h5py/_hl/dataset.py
+h5py/_hl/datatype.py
+h5py/_hl/dims.py
+h5py/_hl/files.py
+h5py/_hl/filters.py
+h5py/_hl/group.py
+h5py/_hl/selections.py
+h5py/_hl/selections2.py
+h5py/tests/__init__.py
+h5py/tests/common.py
+h5py/tests/hl/__init__.py
+h5py/tests/hl/test_dataset_getitem.py
+h5py/tests/hl/test_dims_dimensionproxy.py
+h5py/tests/hl/test_file.py
+h5py/tests/old/__init__.py
+h5py/tests/old/common.py
+h5py/tests/old/test_attrs.py
+h5py/tests/old/test_attrs_data.py
+h5py/tests/old/test_base.py
+h5py/tests/old/test_dataset.py
+h5py/tests/old/test_datatype.py
+h5py/tests/old/test_dimension_scales.py
+h5py/tests/old/test_file.py
+h5py/tests/old/test_group.py
+h5py/tests/old/test_h5.py
+h5py/tests/old/test_h5f.py
+h5py/tests/old/test_h5p.py
+h5py/tests/old/test_h5t.py
+h5py/tests/old/test_objects.py
+h5py/tests/old/test_selections.py
+h5py/tests/old/test_slicing.py
+licenses/hdf5.txt
+licenses/license.txt
+licenses/pytables.txt
+licenses/python.txt
+licenses/stdint.txt
+lzf/.DS_Store
+lzf/LICENSE.txt
+lzf/README.txt
+lzf/example.c
+lzf/lzf_filter.c
+lzf/lzf_filter.h
+lzf/lzf/lzf.h
+lzf/lzf/lzfP.h
+lzf/lzf/lzf_c.c
+lzf/lzf/lzf_d.c
+windows/README.txt
+windows/cacheinit.cmake
+windows/pavement.py
+windows/stdint.h
+windows/unistd.h
\ No newline at end of file
diff --git a/h5py.egg-info/dependency_links.txt b/h5py.egg-info/dependency_links.txt
new file mode 100644
index 0000000..8b13789
--- /dev/null
+++ b/h5py.egg-info/dependency_links.txt
@@ -0,0 +1 @@
+
diff --git a/h5py.egg-info/requires.txt b/h5py.egg-info/requires.txt
new file mode 100644
index 0000000..95d0ae4
--- /dev/null
+++ b/h5py.egg-info/requires.txt
@@ -0,0 +1,2 @@
+numpy>=1.6.1
+Cython>=0.17
diff --git a/h5py.egg-info/top_level.txt b/h5py.egg-info/top_level.txt
new file mode 100644
index 0000000..c5a4eac
--- /dev/null
+++ b/h5py.egg-info/top_level.txt
@@ -0,0 +1 @@
+h5py
diff --git a/h5py/__init__.py b/h5py/__init__.py
index 59bbf47..da1e8d0 100644
--- a/h5py/__init__.py
+++ b/h5py/__init__.py
@@ -32,6 +32,8 @@ from h5py.h5t import py_get_enum as get_enum
from h5py import version
+from .tests import run_tests
+
__version__ = version.version
__doc__ = \
@@ -64,18 +66,3 @@ def enable_ipython_completer():
raise RuntimeError('completer must be enabled in active ipython session')
-def run_tests(verbosity=1):
- import sys
- py_version = sys.version_info[:2]
- if py_version == (2,7) or py_version >= (3,2):
- import unittest
- else:
- try:
- import unittest2 as unittest
- except ImportError:
- raise ImportError(
- "unittest2 is required to run tests with python-%d.%d"
- % py_version
- )
- suite = unittest.TestLoader().discover('h5py')
- result = unittest.TextTestRunner(verbosity=verbosity).run(suite)
diff --git a/h5py/_conv.c b/h5py/_conv.c
deleted file mode 100644
index 2d43d56..0000000
--- a/h5py/_conv.c
+++ /dev/null
@@ -1,6014 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
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- if (PyExceptionInstance_Check(type)) {
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- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_htri_t(htri_t val) {
- const htri_t neg_one = (htri_t)-1, const_zero = (htri_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(htri_t) == sizeof(char)) ||
- (sizeof(htri_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(htri_t) == sizeof(int)) ||
- (sizeof(htri_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(htri_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(htri_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno,
- CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename) {
- PyObject *old_exc, *old_val, *old_tb;
- PyObject *ctx;
- __Pyx_ErrFetch(&old_exc, &old_val, &old_tb);
- #if PY_MAJOR_VERSION < 3
- ctx = PyString_FromString(name);
- #else
- ctx = PyUnicode_FromString(name);
- #endif
- __Pyx_ErrRestore(old_exc, old_val, old_tb);
- if (!ctx) {
- PyErr_WriteUnraisable(Py_None);
- } else {
- PyErr_WriteUnraisable(ctx);
- Py_DECREF(ctx);
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/_conv.pyx b/h5py/_conv.pyx
index 3647d02..264bf73 100644
--- a/h5py/_conv.pyx
+++ b/h5py/_conv.pyx
@@ -14,12 +14,18 @@
"""
from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
+from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
+cimport numpy as np
+from libc.stdlib cimport realloc
+
+# Initialization
+np.import_array()
# Minimal interface for Python objects immune to Cython refcounting
cdef extern from "Python.h":
# From Cython declarations
- ctypedef void PyTypeObject
+ ctypedef int PyTypeObject
ctypedef struct PyObject:
Py_ssize_t ob_refcnt
PyTypeObject *ob_type
@@ -46,16 +52,10 @@ cdef object objectify(PyObject* o):
Py_INCREF(o)
return <object>o
-# Create Python object equivalents
-cdef hid_t H5PY_OBJ = 0
+cdef extern from "numpy/arrayobject.h":
+ PyTypeObject PyArray_Type
+ object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
-cpdef hid_t get_python_obj():
- global H5PY_OBJ
- if H5PY_OBJ <= 0:
- H5PY_OBJ = H5Tcreate(H5T_OPAQUE, sizeof(PyObject*))
- H5Tset_tag(H5PY_OBJ, "PYTHON:OBJECT")
- H5Tlock(H5PY_OBJ)
- return H5PY_OBJ
ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
@@ -332,7 +332,6 @@ cdef int conv_fixed2vlen(void* ipt, void* opt, void* bkg, void* priv) except -1:
cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
cdef Reference ref = Reference()
@@ -345,7 +344,6 @@ cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -
Py_INCREF(ref_ptr) # because Cython discards its reference when the
# function exits
- Py_XDECREF(bkg_obj[0])
buf_obj[0] = ref_ptr
return 0
@@ -442,7 +440,7 @@ cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
void *bkg_i, hid_t dxpl) except -1:
return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_YES)
+ buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
@@ -578,10 +576,198 @@ cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
buf_i, bkg_i, dxpl, 0)
+# =============================================================================
+# ndarray to VLEN routines
+
+cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
+ size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
+ void *bkg_i, hid_t dxpl) except -1:
+
+ cdef int command = cdata[0].command
+ cdef size_t src_size, dst_size
+ cdef TypeID supertype
+ cdef TypeID outtype
+ cdef np.dtype dt
+ cdef int i
+
+ cdef char* buf = <char*>buf_i
+
+ if command == H5T_CONV_INIT:
+
+ cdata[0].need_bkg = H5T_BKG_NO
+ if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
+ return -2
+
+ elif command == H5T_CONV_FREE:
+
+ pass
+
+ elif command == H5T_CONV_CONV:
+
+ # need to pass element dtype to converter
+ supertype = typewrap(H5Tget_super(src_id))
+ dt = supertype.dtype
+ outtype = py_create(dt)
+
+ if buf_stride == 0:
+ # No explicit stride seems to mean that the elements are packed
+ # contiguously in the buffer. In this case we must be careful
+ # not to "stomp on" input elements if the output elements are
+ # of a larger size.
+
+ src_size = H5Tget_size(src_id)
+ dst_size = H5Tget_size(dst_id)
+
+ if src_size >= dst_size:
+ for i from 0<=i<nl:
+ conv_vlen2ndarray(buf + (i*src_size), buf + (i*dst_size),
+ dt, supertype, outtype)
+ else:
+ for i from nl>i>=0:
+ conv_vlen2ndarray(buf + (i*src_size), buf + (i*dst_size),
+ dt, supertype, outtype)
+ else:
+ # With explicit strides, we assume that the library knows the
+ # alignment better than us. Therefore we use the given stride
+ # offsets exclusively.
+ for i from 0<=i<nl:
+ conv_vlen2ndarray(buf + (i*buf_stride), buf + (i*buf_stride),
+ dt, supertype, outtype)
+
+ else:
+ return -2 # Unrecognized command. Note this is NOT an exception.
+
+ return 0
+
+
+cdef struct vlen_t:
+ size_t len
+ void* ptr
+
+cdef int conv_vlen2ndarray(void* ipt, void* opt, np.dtype elem_dtype,
+ TypeID intype, TypeID outtype) except -1:
+
+ cdef PyObject** buf_obj = <PyObject**>opt
+ cdef vlen_t* in_vlen = <vlen_t*>ipt
+ cdef int flags = np.NPY_WRITEABLE | np.NPY_C_CONTIGUOUS
+ cdef np.npy_intp dims[1]
+ cdef void* data
+ cdef np.ndarray ndarray
+
+ dims[0] = in_vlen[0].len
+ data = in_vlen[0].ptr
+ if outtype.get_size() > intype.get_size():
+ data = realloc(data, outtype.get_size() * in_vlen[0].len)
+ H5Tconvert(intype.id, outtype.id, in_vlen[0].len, data, NULL, H5P_DEFAULT)
+
+ Py_INCREF(<PyObject*>elem_dtype)
+ ndarray = PyArray_NewFromDescr(&PyArray_Type, elem_dtype, 1,
+ dims, NULL, data, flags, <object>NULL)
+ ndarray.flags |= np.NPY_OWNDATA
+ Py_INCREF(<PyObject*>ndarray)
+
+ # Write the new object to the buffer in-place
+ in_vlen[0].ptr = NULL
+ buf_obj[0] = <PyObject*>ndarray
+
+ return 0
+
+cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
+ size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
+ void *bkg_i, hid_t dxpl) except -1:
+
+ cdef int command = cdata[0].command
+ cdef size_t src_size, dst_size
+ cdef TypeID supertype
+ cdef TypeID outtype
+ cdef np.dtype dt
+ cdef int i
+ cdef PyObject **pdata = <PyObject **> buf_i
+
+ cdef char* buf = <char*>buf_i
+
+ if command == H5T_CONV_INIT:
+
+ cdata[0].need_bkg = H5T_BKG_NO
+ if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
+ return -2
+ supertype = typewrap(H5Tget_super(dst_id))
+ for i from 0 <= i < nl:
+ if supertype != py_create((<np.ndarray> pdata[i]).dtype, 1):
+ return -2
+ if (<np.ndarray> pdata[i]).ndim != 1:
+ return -2
+
+ elif command == H5T_CONV_FREE:
+
+ pass
+
+ elif command == H5T_CONV_CONV:
+
+ # need to pass element dtype to converter
+ supertype = py_create((<np.ndarray> pdata[0]).dtype)
+ outtype = typewrap(H5Tget_super(dst_id))
+
+ if buf_stride == 0:
+ # No explicit stride seems to mean that the elements are packed
+ # contiguously in the buffer. In this case we must be careful
+ # not to "stomp on" input elements if the output elements are
+ # of a larger size.
+
+ src_size = H5Tget_size(src_id)
+ dst_size = H5Tget_size(dst_id)
+
+ if src_size >= dst_size:
+ for i from 0<=i<nl:
+ conv_ndarray2vlen(buf + (i*src_size), buf + (i*dst_size),
+ supertype, outtype)
+ else:
+ for i from nl>i>=0:
+ conv_ndarray2vlen(buf + (i*src_size), buf + (i*dst_size),
+ supertype, outtype)
+ else:
+ # With explicit strides, we assume that the library knows the
+ # alignment better than us. Therefore we use the given stride
+ # offsets exclusively.
+ for i from 0<=i<nl:
+ conv_ndarray2vlen(buf + (i*buf_stride), buf + (i*buf_stride),
+ supertype, outtype)
+
+ else:
+ return -2 # Unrecognized command. Note this is NOT an exception.
+
+ return 0
+
+
+cdef int conv_ndarray2vlen(void* ipt, void* opt,
+ TypeID intype, TypeID outtype) except -1:
+
+ cdef PyObject** buf_obj = <PyObject**>ipt
+ cdef vlen_t* in_vlen = <vlen_t*>opt
+ cdef int flags = np.NPY_WRITEABLE | np.NPY_C_CONTIGUOUS
+ cdef np.npy_intp dims[1]
+ cdef void* data
+ cdef np.ndarray ndarray = <np.ndarray> buf_obj[0]
+ cdef size_t len = ndarray.shape[0]
+
+ if outtype.get_size() > intype.get_size():
+ data = malloc(outtype.get_size() * len)
+ else:
+ data = malloc(intype.get_size() * len)
+ memcpy(data, ndarray.data, intype.get_size() * len)
+ H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
+
+ in_vlen[0].len = len
+ in_vlen[0].ptr = data
+
+ return 0
+
+# =============================================================================
cpdef int register_converters() except -1:
cdef hid_t vlstring
+ cdef hid_t vlentype
cdef hid_t pyobj
cdef hid_t enum
@@ -590,7 +776,9 @@ cpdef int register_converters() except -1:
enum = H5Tenum_create(H5T_STD_I32LE)
- pyobj = get_python_obj()
+ vlentype = H5Tvlen_create(H5T_STD_I32LE)
+
+ pyobj = H5PY_OBJ
H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
@@ -607,7 +795,11 @@ cpdef int register_converters() except -1:
H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
+ H5Tregister(H5T_PERS_SOFT, "vlen2ndarray", vlentype, pyobj, vlen2ndarray)
+ H5Tregister(H5T_PERS_SOFT, "ndarray2vlen", pyobj, vlentype, ndarray2vlen)
+
H5Tclose(vlstring)
+ H5Tclose(vlentype)
H5Tclose(enum)
return 0
@@ -629,9 +821,7 @@ cpdef int unregister_converters() except -1:
H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- return 0
-
-
-
-
+ H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
+ H5Tunregister(H5T_PERS_SOFT, "ndarray2vlen", -1, -1, ndarray2vlen)
+ return 0
diff --git a/h5py/_errors.c b/h5py/_errors.c
deleted file mode 100644
index f34a64c..0000000
--- a/h5py/_errors.c
+++ /dev/null
@@ -1,3254 +0,0 @@
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-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno,
- CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename) {
- PyObject *old_exc, *old_val, *old_tb;
- PyObject *ctx;
- __Pyx_ErrFetch(&old_exc, &old_val, &old_tb);
- #if PY_MAJOR_VERSION < 3
- ctx = PyString_FromString(name);
- #else
- ctx = PyUnicode_FromString(name);
- #endif
- __Pyx_ErrRestore(old_exc, old_val, old_tb);
- if (!ctx) {
- PyErr_WriteUnraisable(Py_None);
- } else {
- PyErr_WriteUnraisable(ctx);
- Py_DECREF(ctx);
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/_errors.pyx b/h5py/_errors.pyx
index 14fc073..d6ca8c0 100644
--- a/h5py/_errors.pyx
+++ b/h5py/_errors.pyx
@@ -88,9 +88,11 @@ cdef herr_t walk_cb(int n, H5E_error_t *desc, void *e):
cdef int set_exception() except -1:
cdef err_data_t err
- cdef char *mj_desc = NULL
- cdef char *mn_desc = NULL
- cdef char *desc = NULL
+ cdef char *desc = NULL # Note: HDF5 forbids freeing these
+ cdef char *desc_bottom = NULL
+
+ # First, extract the major & minor error codes from the top of the
+ # stack, along with the top-level error description
err.n = -1
@@ -105,21 +107,23 @@ cdef int set_exception() except -1:
desc = err.err.desc
if desc is NULL:
- raise RuntimeError("Failed to extract detailed error description")
-
- try:
- mj_desc = H5Eget_major(err.err.maj_num)
- mn_desc = H5Eget_minor(err.err.min_num)
- if mj_desc == NULL or mn_desc == NULL:
- raise RuntimeError("Failed to obtain error code description")
-
- msg = ("%s (%s: %s)" % (desc.decode('utf-8'),
- mj_desc.decode('utf-8'),
- mn_desc.decode('utf-8')) ).encode('utf-8')
- finally:
- free(mj_desc)
- free(mn_desc)
- # HDF5 forbids freeing "desc"
+ raise RuntimeError("Failed to extract top-level error description")
+
+ # Second, retrieve the bottom-most error description for additional info
+
+ err.n = -1
+
+ if H5Ewalk(H5E_WALK_DOWNWARD, walk_cb, &err) < 0:
+ raise RuntimeError("Failed to walk error stack")
+
+ desc_bottom = err.err.desc
+ if desc_bottom is NULL:
+ raise RuntimeError("Failed to extract bottom-level error description")
+
+ msg = ("%s (%s)" % (desc.decode('utf-8').capitalize(), desc_bottom.decode('utf-8').capitalize())).encode('utf-8')
+
+ # Finally, set the exception. We do this with the Python C function
+ # so that the traceback doesn't point here.
PyErr_SetString(eclass, msg)
diff --git a/h5py/_hdf5.pxd b/h5py/_hdf5.pxd
index aa2cfe0..deeb5ba 100644
--- a/h5py/_hdf5.pxd
+++ b/h5py/_hdf5.pxd
@@ -6,14 +6,43 @@ cdef extern from "hdf5.h":
herr_t H5open() except *
herr_t H5close() except *
herr_t H5get_libversion(unsigned *majnum, unsigned *minnum, unsigned *relnum) except *
+ hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist) except *
+ hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx) except *
+ hid_t H5Aopen_name(hid_t loc_id, char *name) except *
+ herr_t H5Aclose(hid_t attr_id) except *
+ herr_t H5Adelete(hid_t loc_id, char *name) except *
+ herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf) except *
+ herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf ) except *
+ int H5Aget_num_attrs(hid_t loc_id) except *
+ ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf) except *
+ hid_t H5Aget_space(hid_t attr_id) except *
+ hid_t H5Aget_type(hid_t attr_id) except *
+ herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data) except *
+ herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
+ herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *
+ hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id) except *
+ herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id) except *
+ herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id) except *
+ herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id) except *
+ htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
+ htri_t H5Aexists(hid_t obj_id, char *attr_name) except *
+ herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name) except *
+ herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id) except *
+ herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo) except *
+ herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id) except *
+ herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id) except *
+ herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data) except *
+ hsize_t H5Aget_storage_size(hid_t attr_id) except *
hid_t H5Dcreate2(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id) except *
hid_t H5Dcreate_anon(hid_t file_id, hid_t type_id, hid_t space_id, hid_t plist_id, hid_t dapl_id) except *
hid_t H5Dopen(hid_t file_id, char *name) except *
+ hid_t H5Dopen2(hid_t loc_id, char *name, hid_t dapl_id ) except *
herr_t H5Dclose(hid_t dset_id) except *
hid_t H5Dget_space(hid_t dset_id) except *
herr_t H5Dget_space_status(hid_t dset_id, H5D_space_status_t *status) except *
hid_t H5Dget_type(hid_t dset_id) except *
hid_t H5Dget_create_plist(hid_t dataset_id) except *
+ hid_t H5Dget_access_plist(hid_t dataset_id) except *
haddr_t H5Dget_offset(hid_t dset_id) except *
hsize_t H5Dget_storage_size(hid_t dset_id) except *
herr_t H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t plist_id, void *buf) except *
@@ -46,6 +75,12 @@ cdef extern from "hdf5.h":
herr_t H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, size_t *cur_size_ptr, int *cur_num_entries_ptr) except *
herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id) except *
herr_t H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) except *
+ IF HDF5_VERSION >= (1, 8, 9):
+ IF MPI:
+ herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag) except *
+ IF HDF5_VERSION >= (1, 8, 9):
+ IF MPI:
+ herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag) except *
hid_t H5Gcreate(hid_t loc_id, char *name, size_t size_hint) except *
hid_t H5Gopen(hid_t loc_id, char *name) except *
herr_t H5Gclose(hid_t group_id) except *
@@ -72,6 +107,7 @@ cdef extern from "hdf5.h":
int H5Idec_ref(hid_t obj_id) except *
int H5Iget_ref(hid_t obj_id) except *
int H5Iinc_ref(hid_t obj_id) except *
+ htri_t H5Iis_valid( hid_t obj_id ) except *
herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
@@ -107,6 +143,8 @@ cdef extern from "hdf5.h":
herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data) except *
herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id) except *
herr_t H5Oclose(hid_t object_id) except *
+ IF HDF5_VERSION >= (1, 8, 5):
+ htri_t H5Oexists_by_name(hid_t loc_id, char * name, hid_t lapl_id ) except *
hid_t H5Pcreate(hid_t plist_id) except *
hid_t H5Pcopy(hid_t plist_id) except *
int H5Pget_class(hid_t plist_id) except *
@@ -192,6 +230,12 @@ cdef extern from "hdf5.h":
herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags) except *
herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high) except *
herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high) except *
+ herr_t H5Pset_alignment(hid_t plist_id, hsize_t threshold, hsize_t alignment) except *
+ herr_t H5Pget_alignment(hid_t plist_id, hsize_t *threshold, hsize_t *alignment) except *
+ IF MPI:
+ herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info) except *
+ IF MPI:
+ herr_t H5Pget_fapl_mpio(hid_t fapl_id, MPI_Comm *comm, MPI_Info *info) except *
herr_t H5Rcreate(void *ref, hid_t loc_id, char *name, H5R_type_t ref_type, hid_t space_id) except *
hid_t H5Rdereference(hid_t obj_id, H5R_type_t ref_type, void *ref) except *
hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, void *ref) except *
@@ -237,7 +281,13 @@ cdef extern from "hdf5.h":
htri_t H5Tdetect_class(hid_t type_id, H5T_class_t dtype_class) except *
herr_t H5Tclose(hid_t type_id) except *
hid_t H5Tget_native_type(hid_t type_id, H5T_direction_t direction) except *
+ herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id) except *
+ hid_t H5Tdecode(unsigned char *buf) except *
+ herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc) except *
+ H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata) except *
herr_t H5Tconvert(hid_t src_id, hid_t dst_id, size_t nelmts, void *buf, void *background, hid_t plist_id) except *
+ herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
+ herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
herr_t H5Tset_size(hid_t type_id, size_t size) except *
H5T_order_t H5Tget_order(hid_t type_id) except *
herr_t H5Tset_order(hid_t type_id, H5T_order_t order) except *
@@ -281,54 +331,12 @@ cdef extern from "hdf5.h":
int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm) except *
herr_t H5Tset_tag(hid_t type_id, char* tag) except *
char* H5Tget_tag(hid_t type_id) except *
- hid_t H5Tdecode(unsigned char *buf) except *
- herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc) except *
- herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id) except *
- H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata) except *
- herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
- herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
htri_t H5Zfilter_avail(H5Z_filter_t id_) except *
herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags) except *
- hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist) except *
- hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx) except *
- hid_t H5Aopen_name(hid_t loc_id, char *name) except *
- herr_t H5Aclose(hid_t attr_id) except *
- herr_t H5Adelete(hid_t loc_id, char *name) except *
- herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf) except *
- herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf ) except *
- int H5Aget_num_attrs(hid_t loc_id) except *
- ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf) except *
- hid_t H5Aget_space(hid_t attr_id) except *
- hid_t H5Aget_type(hid_t attr_id) except *
- herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data) except *
- herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
- herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *
- hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id) except *
- herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id) except *
- herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id) except *
- herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id) except *
- htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
- htri_t H5Aexists(hid_t obj_id, char *attr_name) except *
- herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name) except *
- herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id) except *
- herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo) except *
- herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id) except *
- herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id) except *
- herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data) except *
- hsize_t H5Aget_storage_size(hid_t attr_id) except *
- IF MPI:
- herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info) except *
- IF MPI:
- herr_t H5Pset_fapl_mpiposix(hid_t fapl_id, MPI_Comm comm, hbool_t hints) except *
- IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag) except *
- IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag) except *
cdef extern from "hdf5_hl.h":
herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) except *
herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) except *
+ htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) except *
herr_t H5DSset_scale(hid_t dsid, char *dimname) except *
int H5DSget_num_scales(hid_t did, unsigned int dim) except *
herr_t H5DSset_label(hid_t did, unsigned int idx, char *label) except *
@@ -336,4 +344,3 @@ cdef extern from "hdf5_hl.h":
ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size) except *
htri_t H5DSis_scale(hid_t did) except *
herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, void *visitor_data) except *
- htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) except *
diff --git a/h5py/_hl/attrs.py b/h5py/_hl/attrs.py
index f6be7fd..37685d8 100644
--- a/h5py/_hl/attrs.py
+++ b/h5py/_hl/attrs.py
@@ -13,6 +13,7 @@ import collections
import h5py
from h5py import h5s, h5t, h5a
from . import base
+from .base import phil, with_phil
from .dataset import readtime_dtype
@@ -42,6 +43,7 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
"""
self._id = parent.id
+ @with_phil
def __getitem__(self, name):
""" Read the value of an attribute.
"""
@@ -61,6 +63,7 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
return arr[()]
return arr
+ @with_phil
def __setitem__(self, name, value):
""" Set a new attribute, overwriting any existing attribute.
@@ -70,6 +73,7 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
"""
self.create(name, data=value, dtype=base.guess_dtype(value))
+ @with_phil
def __delitem__(self, name):
""" Delete an attribute (which must already exist). """
h5a.delete(self._id, self._e(name))
@@ -89,43 +93,44 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
are given.
"""
- if data is not None:
- data = numpy.asarray(data, order='C', dtype=dtype)
- if shape is None:
- shape = data.shape
- elif numpy.product(shape) != numpy.product(data.shape):
- raise ValueError("Shape of new attribute conflicts with shape of data")
-
- if dtype is None:
- dtype = data.dtype
-
- if isinstance(dtype, h5py.Datatype):
- htype = dtype.id
- dtype = htype.dtype
- else:
- if dtype is None:
- dtype = numpy.dtype('f')
- htype = h5t.py_create(dtype, logical=True)
+ with phil:
+ if data is not None:
+ data = numpy.asarray(data, order='C', dtype=dtype)
+ if shape is None:
+ shape = data.shape
+ elif numpy.product(shape) != numpy.product(data.shape):
+ raise ValueError("Shape of new attribute conflicts with shape of data")
+
+ if dtype is None:
+ dtype = data.dtype
+
+ if isinstance(dtype, h5py.Datatype):
+ htype = dtype.id
+ dtype = htype.dtype
+ else:
+ if dtype is None:
+ dtype = numpy.dtype('f')
+ htype = h5t.py_create(dtype, logical=True)
- if shape is None:
- raise ValueError('At least one of "shape" or "data" must be given')
+ if shape is None:
+ raise ValueError('At least one of "shape" or "data" must be given')
- data = data.reshape(shape)
+ data = data.reshape(shape)
- space = h5s.create_simple(shape)
+ space = h5s.create_simple(shape)
- if name in self:
- h5a.delete(self._id, self._e(name))
+ if name in self:
+ h5a.delete(self._id, self._e(name))
- attr = h5a.create(self._id, self._e(name), htype, space)
+ attr = h5a.create(self._id, self._e(name), htype, space)
- if data is not None:
- try:
- attr.write(data)
- except:
- attr._close()
- h5a.delete(self._id, self._e(name))
- raise
+ if data is not None:
+ try:
+ attr.write(data)
+ except:
+ attr._close()
+ h5a.delete(self._id, self._e(name))
+ raise
def modify(self, name, value):
""" Change the value of an attribute while preserving its type.
@@ -136,22 +141,24 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
If the attribute doesn't exist, it will be automatically created.
"""
- if not name in self:
- self[name] = value
- else:
- value = numpy.asarray(value, order='C')
+ with phil:
+ if not name in self:
+ self[name] = value
+ else:
+ value = numpy.asarray(value, order='C')
- attr = h5a.open(self._id, self._e(name))
+ attr = h5a.open(self._id, self._e(name))
- if attr.get_space().get_simple_extent_type() == h5s.NULL:
- raise IOError("Empty attributes can't be modified")
+ if attr.get_space().get_simple_extent_type() == h5s.NULL:
+ raise IOError("Empty attributes can't be modified")
- # Allow the case of () <-> (1,)
- if (value.shape != attr.shape) and not \
- (numpy.product(value.shape) == 1 and numpy.product(attr.shape) == 1):
- raise TypeError("Shape of data is incompatible with existing attribute")
- attr.write(value)
+ # Allow the case of () <-> (1,)
+ if (value.shape != attr.shape) and not \
+ (numpy.product(value.shape) == 1 and numpy.product(attr.shape) == 1):
+ raise TypeError("Shape of data is incompatible with existing attribute")
+ attr.write(value)
+ @with_phil
def __len__(self):
""" Number of attributes attached to the object. """
# I expect we will not have more than 2**32 attributes
@@ -159,19 +166,22 @@ class AttributeManager(base.DictCompat, base.CommonStateObject):
def __iter__(self):
""" Iterate over the names of attributes. """
- attrlist = []
+ with phil:
+ attrlist = []
- def iter_cb(name, *args):
- attrlist.append(self._d(name))
- h5a.iterate(self._id, iter_cb)
+ def iter_cb(name, *args):
+ attrlist.append(self._d(name))
+ h5a.iterate(self._id, iter_cb)
for name in attrlist:
yield name
+ @with_phil
def __contains__(self, name):
""" Determine if an attribute exists, by name. """
return h5a.exists(self._id, self._e(name))
+ @with_phil
def __repr__(self):
if not self._id:
return "<Attributes of closed HDF5 object>"
diff --git a/h5py/_hl/base.py b/h5py/_hl/base.py
index 8cedf86..710934a 100644
--- a/h5py/_hl/base.py
+++ b/h5py/_hl/base.py
@@ -14,20 +14,27 @@ import sys
from h5py import h5d, h5i, h5r, h5p, h5f, h5t
+# The high-level interface is serialized; every public API function & method
+# is wrapped in a lock. We re-use the low-level lock because (1) it's fast,
+# and (2) it eliminates the possibility of deadlocks due to out-of-order
+# lock acquisition.
+from h5py._objects import phil, with_phil
+
py3 = sys.version_info[0] == 3
def is_hdf5(fname):
""" Determine if a file is valid HDF5 (False if it doesn't exist). """
- fname = os.path.abspath(fname)
+ with phil:
+ fname = os.path.abspath(fname)
- if os.path.isfile(fname):
- try:
- fname = fname.encode(sys.getfilesystemencoding())
- except (UnicodeError, LookupError):
- pass
- return h5f.is_hdf5(fname)
- return False
+ if os.path.isfile(fname):
+ try:
+ fname = fname.encode(sys.getfilesystemencoding())
+ except (UnicodeError, LookupError):
+ pass
+ return h5f.is_hdf5(fname)
+ return False
def guess_dtype(data):
@@ -35,16 +42,17 @@ def guess_dtype(data):
if nothing is appropriate (or if it should be left up the the array
constructor to figure out)
"""
- if isinstance(data, h5r.RegionReference):
- return h5t.special_dtype(ref=h5r.RegionReference)
- if isinstance(data, h5r.Reference):
- return h5t.special_dtype(ref=h5r.Reference)
- if type(data) == bytes:
- return h5t.special_dtype(vlen=bytes)
- if type(data) == unicode:
- return h5t.special_dtype(vlen=unicode)
+ with phil:
+ if isinstance(data, h5r.RegionReference):
+ return h5t.special_dtype(ref=h5r.RegionReference)
+ if isinstance(data, h5r.Reference):
+ return h5t.special_dtype(ref=h5r.Reference)
+ if type(data) == bytes:
+ return h5t.special_dtype(vlen=bytes)
+ if type(data) == unicode:
+ return h5t.special_dtype(vlen=unicode)
- return None
+ return None
def default_lapl():
@@ -160,6 +168,7 @@ class _RegionProxy(object):
def __init__(self, obj):
self.id = obj.id
+ @with_phil
def __getitem__(self, args):
if not isinstance(self.id, h5d.DatasetID):
raise TypeError("Region references can only be made to datasets")
@@ -169,15 +178,17 @@ class _RegionProxy(object):
def shape(self, ref):
""" Get the shape of the target dataspace referred to by *ref*. """
- sid = h5r.get_region(ref, self.id)
- return sid.shape
+ with phil:
+ sid = h5r.get_region(ref, self.id)
+ return sid.shape
def selection(self, ref):
""" Get the shape of the target dataspace selection referred to by *ref*
"""
- from . import selections
- sid = h5r.get_region(ref, self.id)
- return selections.guess_shape(sid)
+ with phil:
+ from . import selections
+ sid = h5r.get_region(ref, self.id)
+ return selections.guess_shape(sid)
class HLObject(CommonStateObject):
@@ -187,17 +198,20 @@ class HLObject(CommonStateObject):
"""
@property
+ @with_phil
def file(self):
""" Return a File instance associated with this object """
import files
return files.File(self.id)
@property
+ @with_phil
def name(self):
""" Return the full name of this object. None if anonymous. """
return self._d(h5i.get_name(self.id))
@property
+ @with_phil
def parent(self):
"""Return the parent group of this object.
@@ -209,16 +223,19 @@ class HLObject(CommonStateObject):
return self.file[posixpath.dirname(self.name)]
@property
+ @with_phil
def id(self):
""" Low-level identifier appropriate for this object """
return self._id
@property
+ @with_phil
def ref(self):
""" An (opaque) HDF5 reference to this object """
return h5r.create(self.id, b'.', h5r.OBJECT)
@property
+ @with_phil
def regionref(self):
"""Create a region reference (Datasets only).
@@ -232,28 +249,34 @@ class HLObject(CommonStateObject):
return _RegionProxy(self)
@property
+ @with_phil
def attrs(self):
""" Attributes attached to this object """
import attrs
return attrs.AttributeManager(self)
+ @with_phil
def __init__(self, oid):
""" Setup this object, given its low-level identifier """
self._id = oid
+ @with_phil
def __hash__(self):
return hash(self.id)
+ @with_phil
def __eq__(self, other):
if hasattr(other, 'id'):
return self.id == other.id
return False
+ @with_phil
def __ne__(self, other):
return not self.__eq__(other)
def __nonzero__(self):
- return bool(self.id)
+ with phil:
+ return bool(self.id)
class View(object):
@@ -261,15 +284,18 @@ class View(object):
def __init__(self, obj):
self._obj = obj
+ @with_phil
def __len__(self):
return len(self._obj)
class KeyView(View):
+ @with_phil
def __contains__(self, what):
return what in self._obj
+ @with_phil
def __iter__(self):
for x in self._obj:
yield x
@@ -280,6 +306,7 @@ class ValueView(View):
def __contains__(self, what):
raise TypeError("Containership testing doesn't work for values. :(")
+ @with_phil
def __iter__(self):
for x in self._obj:
yield self._obj.get(x)
@@ -287,11 +314,13 @@ class ValueView(View):
class ItemView(View):
+ @with_phil
def __contains__(self, what):
if what[0] in self._obj:
return what[1] == self._obj.get(what[0])
return False
+ @with_phil
def __iter__(self):
for x in self._obj:
yield (x, self._obj.get(x))
@@ -306,10 +335,11 @@ class DictCompat(object):
def get(self, name, default=None):
""" Retrieve the member, or return default if it doesn't exist """
- try:
- return self[name]
- except KeyError:
- return default
+ with phil:
+ try:
+ return self[name]
+ except KeyError:
+ return default
if py3:
def keys(self):
@@ -327,7 +357,8 @@ class DictCompat(object):
else:
def keys(self):
""" Get a list containing member names """
- return list(self)
+ with phil:
+ return list(self)
def iterkeys(self):
""" Get an iterator over member names """
@@ -335,7 +366,8 @@ class DictCompat(object):
def values(self):
""" Get a list containing member objects """
- return [self.get(x) for x in self]
+ with phil:
+ return [self.get(x) for x in self]
def itervalues(self):
""" Get an iterator over member objects """
@@ -344,7 +376,8 @@ class DictCompat(object):
def items(self):
""" Get a list of tuples containing (name, object) pairs """
- return [(x, self.get(x)) for x in self]
+ with phil:
+ return [(x, self.get(x)) for x in self]
def iteritems(self):
""" Get an iterator over (name, object) pairs """
diff --git a/h5py/_hl/dataset.py b/h5py/_hl/dataset.py
index b530788..3f71da4 100644
--- a/h5py/_hl/dataset.py
+++ b/h5py/_hl/dataset.py
@@ -13,18 +13,16 @@ import numpy
import h5py
from h5py import h5s, h5t, h5r, h5d
-from .base import HLObject, py3
+from .base import HLObject, py3, phil, with_phil
from . import filters
from . import selections as sel
from . import selections2 as sel2
+_LEGACY_GZIP_COMPRESSION_VALS = frozenset(range(10))
+
def readtime_dtype(basetype, names):
""" Make a NumPy dtype appropriate for reading """
- if basetype.kind == 'O':
- # Special-dtype fields break indexing
- basetype = numpy.dtype('O')
-
if len(names) == 0: # Not compound, or we want all fields
return basetype
@@ -61,6 +59,13 @@ def make_new_dset(parent, shape=None, dtype=None, data=None,
if data is not None and (numpy.product(shape) != numpy.product(data.shape)):
raise ValueError("Shape tuple is incompatible with data")
+ tmp_shape = maxshape if maxshape is not None else shape
+ # Validate chunk shape
+ if isinstance(chunks, tuple) and (-numpy.array([ i>=j for i,j in zip(tmp_shape,chunks) if i is not None])).any():
+ errmsg = "Chunk shape must not be greater than data shape in any dimension. "\
+ "{} is not compatible with {}".format(chunks, shape)
+ raise ValueError(errmsg)
+
if isinstance(dtype, h5py.Datatype):
# Named types are used as-is
tid = dtype.id
@@ -86,7 +91,7 @@ def make_new_dset(parent, shape=None, dtype=None, data=None,
compression = 'gzip'
# Legacy
- if compression in range(10):
+ if compression in _LEGACY_GZIP_COMPRESSION_VALS:
if compression_opts is not None:
raise TypeError("Conflict in compression options")
compression_opts = compression
@@ -146,29 +151,35 @@ class Dataset(HLObject):
return AstypeContext(self, dtype)
@property
+ @with_phil
def dims(self):
from . dims import DimensionManager
return DimensionManager(self)
@property
+ @with_phil
def shape(self):
"""Numpy-style shape tuple giving dataset dimensions"""
return self.id.shape
@shape.setter
+ @with_phil
def shape(self, shape):
self.resize(shape)
@property
+ @with_phil
def size(self):
"""Numpy-style attribute giving the total dataset size"""
return numpy.prod(self.shape)
@property
+ @with_phil
def dtype(self):
"""Numpy dtype representing the datatype"""
return self.id.dtype
@property
+ @with_phil
def value(self):
""" Alias for dataset[()] """
DeprecationWarning("dataset.value has been deprecated. "
@@ -176,6 +187,7 @@ class Dataset(HLObject):
return self[()]
@property
+ @with_phil
def chunks(self):
"""Dataset chunks (or None)"""
dcpl = self._dcpl
@@ -184,6 +196,7 @@ class Dataset(HLObject):
return None
@property
+ @with_phil
def compression(self):
"""Compression strategy (or None)"""
for x in ('gzip','lzf','szip'):
@@ -192,21 +205,25 @@ class Dataset(HLObject):
return None
@property
+ @with_phil
def compression_opts(self):
""" Compression setting. Int(0-9) for gzip, 2-tuple for szip. """
return self._filters.get(self.compression, None)
@property
+ @with_phil
def shuffle(self):
"""Shuffle filter present (T/F)"""
return 'shuffle' in self._filters
@property
+ @with_phil
def fletcher32(self):
"""Fletcher32 filter is present (T/F)"""
return 'fletcher32' in self._filters
@property
+ @with_phil
def scaleoffset(self):
"""Scale/offset filter settings. For integer data types, this is
the number of bits stored, or 0 for auto-detected. For floating
@@ -218,6 +235,7 @@ class Dataset(HLObject):
return None
@property
+ @with_phil
def maxshape(self):
"""Shape up to which this dataset can be resized. Axes with value
None have no resize limit. """
@@ -226,12 +244,14 @@ class Dataset(HLObject):
return tuple(x if x != h5s.UNLIMITED else None for x in dims)
@property
+ @with_phil
def fillvalue(self):
"""Fill value for this dataset (0 by default)"""
arr = numpy.ndarray((1,), dtype=self.dtype)
dcpl = self._dcpl.get_fill_value(arr)
return arr[0]
+ @with_phil
def __init__(self, bind):
""" Create a new Dataset object by binding to a low-level DatasetID.
"""
@@ -260,23 +280,25 @@ class Dataset(HLObject):
grown or shrunk independently. The coordinates of existing data are
fixed.
"""
- if self.chunks is None:
- raise TypeError("Only chunked datasets can be resized")
-
- if axis is not None:
- if not (axis >=0 and axis < self.id.rank):
- raise ValueError("Invalid axis (0 to %s allowed)" % (self.id.rank-1))
- try:
- newlen = int(size)
- except TypeError:
- raise TypeError("Argument must be a single int if axis is specified")
- size = list(self.shape)
- size[axis] = newlen
-
- size = tuple(size)
- self.id.set_extent(size)
- #h5f.flush(self.id) # THG recommends
-
+ with phil:
+ if self.chunks is None:
+ raise TypeError("Only chunked datasets can be resized")
+
+ if axis is not None:
+ if not (axis >=0 and axis < self.id.rank):
+ raise ValueError("Invalid axis (0 to %s allowed)" % (self.id.rank-1))
+ try:
+ newlen = int(size)
+ except TypeError:
+ raise TypeError("Argument must be a single int if axis is specified")
+ size = list(self.shape)
+ size[axis] = newlen
+
+ size = tuple(size)
+ self.id.set_extent(size)
+ #h5f.flush(self.id) # THG recommends
+
+ @with_phil
def __len__(self):
""" The size of the first axis. TypeError if scalar.
@@ -293,11 +315,13 @@ class Dataset(HLObject):
Use of this method is preferred to len(dset), as Python's built-in
len() cannot handle values greater then 2**32 on 32-bit systems.
"""
- shape = self.shape
- if len(shape) == 0:
- raise TypeError("Attempt to take len() of scalar dataset")
- return shape[0]
+ with phil:
+ shape = self.shape
+ if len(shape) == 0:
+ raise TypeError("Attempt to take len() of scalar dataset")
+ return shape[0]
+ @with_phil
def __iter__(self):
""" Iterate over the first axis. TypeError if scalar.
@@ -310,6 +334,7 @@ class Dataset(HLObject):
yield self[i]
+ @with_phil
def __getitem__(self, args):
""" Read a slice from the HDF5 dataset.
@@ -324,8 +349,10 @@ class Dataset(HLObject):
args = args if isinstance(args, tuple) else (args,)
# Sort field indices from the rest of the args.
- names = tuple(x for x in args if isinstance(x, str))
- args = tuple(x for x in args if not isinstance(x, str))
+ names = tuple(x for x in args if isinstance(x, basestring))
+ args = tuple(x for x in args if not isinstance(x, basestring))
+ if not py3:
+ names = tuple(x.encode('utf-8') if isinstance(x, unicode) else x for x in names)
def strip_fields(basetype):
""" Strip extra dtype information from special types """
@@ -364,8 +391,9 @@ class Dataset(HLObject):
return numpy.dtype([(name, basetype.fields[name][0]) for name in names])
- if self._local.astype is not None:
- new_dtype = readtime_dtype(self._local.astype, names)
+ new_dtype = getattr(self._local, 'astype', None)
+ if new_dtype is not None:
+ new_dtype = readtime_dtype(new_dtype, names)
else:
# This is necessary because in the case of array types, NumPy
# discards the array information at the top level.
@@ -383,9 +411,9 @@ class Dataset(HLObject):
sid = h5r.get_region(args[0], self.id)
mshape = sel.guess_shape(sid)
if mshape is None:
- return np.array((0,), dtype=new_dtype)
+ return numpy.array((0,), dtype=new_dtype)
if numpy.product(mshape) == 0:
- return np.array(mshape, dtype=new_dtype)
+ return numpy.array(mshape, dtype=new_dtype)
out = numpy.empty(mshape, dtype=new_dtype)
sid_out = h5s.create_simple(mshape)
sid_out.select_all()
@@ -447,6 +475,8 @@ class Dataset(HLObject):
arr = arr[0]
return arr
+
+ @with_phil
def __setitem__(self, args, val):
""" Write to the HDF5 dataset from a Numpy array.
@@ -457,12 +487,33 @@ class Dataset(HLObject):
args = args if isinstance(args, tuple) else (args,)
# Sort field indices from the slicing
- names = tuple(x for x in args if isinstance(x, str))
- args = tuple(x for x in args if not isinstance(x, str))
+ names = tuple(x for x in args if isinstance(x, basestring))
+ args = tuple(x for x in args if not isinstance(x, basestring))
+ if not py3:
+ names = tuple(x.encode('utf-8') if isinstance(x, unicode) else x for x in names)
# Generally we try to avoid converting the arrays on the Python
# side. However, for compound literals this is unavoidable.
- if self.dtype.kind == "O" or \
+ vlen = h5t.check_dtype(vlen=self.dtype)
+ if vlen not in (bytes, unicode, None):
+ try:
+ val = numpy.asarray(val, dtype=vlen)
+ except ValueError:
+ try:
+ val = numpy.array([numpy.array(x, dtype=vlen)
+ for x in val], dtype=self.dtype)
+ except ValueError:
+ pass
+ if vlen == val.dtype:
+ if val.ndim > 1:
+ tmp = numpy.empty(shape=val.shape[:-1], dtype=object)
+ tmp.ravel()[:] = [i for i in val.reshape(
+ (numpy.product(val.shape[:-1]), val.shape[-1]))]
+ else:
+ tmp = numpy.array([None], dtype=object)
+ tmp[0] = val
+ val = tmp
+ elif self.dtype.kind == "O" or \
(self.dtype.kind == 'V' and \
(not isinstance(val, numpy.ndarray) or val.dtype.kind != 'V') and \
(self.dtype.subdtype == None)):
@@ -558,20 +609,20 @@ class Dataset(HLObject):
Broadcasting is supported for simple indexing.
"""
+ with phil:
+ if source_sel is None:
+ source_sel = sel.SimpleSelection(self.shape)
+ else:
+ source_sel = sel.select(self.shape, source_sel, self.id) # for numpy.s_
+ fspace = source_sel._id
- if source_sel is None:
- source_sel = sel.SimpleSelection(self.shape)
- else:
- source_sel = sel.select(self.shape, source_sel, self.id) # for numpy.s_
- fspace = source_sel._id
-
- if dest_sel is None:
- dest_sel = sel.SimpleSelection(dest.shape)
- else:
- dest_sel = sel.select(dest.shape, dest_sel, self.id)
+ if dest_sel is None:
+ dest_sel = sel.SimpleSelection(dest.shape)
+ else:
+ dest_sel = sel.select(dest.shape, dest_sel, self.id)
- for mspace in dest_sel.broadcast(source_sel.mshape):
- self.id.read(mspace, fspace, dest)
+ for mspace in dest_sel.broadcast(source_sel.mshape):
+ self.id.read(mspace, fspace, dest)
def write_direct(self, source, source_sel=None, dest_sel=None):
""" Write data directly to HDF5 from a NumPy array.
@@ -581,20 +632,22 @@ class Dataset(HLObject):
Broadcasting is supported for simple indexing.
"""
- if source_sel is None:
- source_sel = sel.SimpleSelection(source.shape)
- else:
- source_sel = sel.select(source.shape, source_sel, self.id) # for numpy.s_
- mspace = source_sel._id
+ with phil:
+ if source_sel is None:
+ source_sel = sel.SimpleSelection(source.shape)
+ else:
+ source_sel = sel.select(source.shape, source_sel, self.id) # for numpy.s_
+ mspace = source_sel._id
- if dest_sel is None:
- dest_sel = sel.SimpleSelection(self.shape)
- else:
- dest_sel = sel.select(self.shape, dest_sel, self.id)
+ if dest_sel is None:
+ dest_sel = sel.SimpleSelection(self.shape)
+ else:
+ dest_sel = sel.select(self.shape, dest_sel, self.id)
- for fspace in dest_sel.broadcast(source_sel.mshape):
- self.id.write(mspace, fspace, source)
+ for fspace in dest_sel.broadcast(source_sel.mshape):
+ self.id.write(mspace, fspace, source)
+ @with_phil
def __array__(self, dtype=None):
""" Create a Numpy array containing the whole dataset. DON'T THINK
THIS MEANS DATASETS ARE INTERCHANGABLE WITH ARRAYS. For one thing,
@@ -609,6 +662,7 @@ class Dataset(HLObject):
self.read_direct(arr)
return arr
+ @with_phil
def __repr__(self):
if not self:
r = u'<Closed HDF5 dataset>'
diff --git a/h5py/_hl/datatype.py b/h5py/_hl/datatype.py
index 2cc479c..3e1dd01 100644
--- a/h5py/_hl/datatype.py
+++ b/h5py/_hl/datatype.py
@@ -10,7 +10,7 @@
import posixpath as pp
from ..h5t import TypeID
-from .base import HLObject
+from .base import HLObject, phil, with_phil
class Datatype(HLObject):
@@ -25,10 +25,12 @@ class Datatype(HLObject):
"""
@property
+ @with_phil
def dtype(self):
"""Numpy dtype equivalent for this datatype"""
return self.id.dtype
+ @with_phil
def __init__(self, bind):
""" Create a new Datatype object by binding to a low-level TypeID.
"""
@@ -36,6 +38,7 @@ class Datatype(HLObject):
raise ValueError("%s is not a TypeID" % bind)
HLObject.__init__(self, bind)
+ @with_phil
def __repr__(self):
if not self.id:
return "<Closed HDF5 named type>"
diff --git a/h5py/_hl/dims.py b/h5py/_hl/dims.py
index 8bb62ec..af7db6e 100644
--- a/h5py/_hl/dims.py
+++ b/h5py/_hl/dims.py
@@ -11,12 +11,14 @@ import numpy
from h5py import h5ds
from . import base
+from .base import phil, with_phil
from .dataset import Dataset, readtime_dtype
class DimensionProxy(base.CommonStateObject):
@property
+ @with_phil
def label(self):
#return h5ds.get_label(self._id, self._dimension)
# Produces a segfault for a non-existent label (Fixed in hdf5-1.8.8).
@@ -27,26 +29,33 @@ class DimensionProxy(base.CommonStateObject):
except (KeyError, IndexError):
return ''
@label.setter
+ @with_phil
def label(self, val):
h5ds.set_label(self._id, self._dimension, self._e(val))
+ @with_phil
def __init__(self, id, dimension):
self._id = id
self._dimension = dimension
+ @with_phil
def __hash__(self):
return hash((type(self), self._id, self._dimension))
+ @with_phil
def __eq__(self, other):
return hash(self) == hash(other)
+ @with_phil
def __iter__(self):
for k in self.keys():
yield k
+ @with_phil
def __len__(self):
return h5ds.get_num_scales(self._id, self._dimension)
+ @with_phil
def __getitem__(self, item):
if isinstance(item, int):
scales = []
@@ -64,27 +73,38 @@ class DimensionProxy(base.CommonStateObject):
return res
def attach_scale(self, dset):
- h5ds.attach_scale(self._id, dset.id, self._dimension)
+ with phil:
+ h5ds.attach_scale(self._id, dset.id, self._dimension)
def detach_scale(self, dset):
- h5ds.detach_scale(self._id, dset.id, self._dimension)
+ with phil:
+ h5ds.detach_scale(self._id, dset.id, self._dimension)
def items(self):
- scales = []
- def f(dsid):
- scales.append(dsid)
- h5ds.iterate(self._id, self._dimension, f, 0)
- return [
- (self._d(h5ds.get_scale_name(id)), Dataset(id))
- for id in scales
- ]
+ with phil:
+ scales = []
+ def f(dsid):
+ scales.append(dsid)
+
+ # H5DSiterate raises an error if there are no dimension scales,
+ # rather than iterating 0 times. See #483.
+ if len(self) > 0:
+ h5ds.iterate(self._id, self._dimension, f, 0)
+
+ return [
+ (self._d(h5ds.get_scale_name(id)), Dataset(id))
+ for id in scales
+ ]
def keys(self):
- return [key for (key, val) in self.items()]
+ with phil:
+ return [key for (key, val) in self.items()]
def values(self):
- return [val for (key, val) in self.items()]
+ with phil:
+ return [val for (key, val) in self.items()]
+ @with_phil
def __repr__(self):
if not self._id:
return "<Dimension of closed HDF5 dataset>"
@@ -97,11 +117,13 @@ class DimensionManager(base.DictCompat, base.CommonStateObject):
"""
"""
+ @with_phil
def __init__(self, parent):
""" Private constructor.
"""
self._id = parent.id
+ @with_phil
def __getitem__(self, index):
""" Return a Dimension object
"""
@@ -109,19 +131,23 @@ class DimensionManager(base.DictCompat, base.CommonStateObject):
raise IndexError('Index out of range')
return DimensionProxy(self._id, index)
+ @with_phil
def __len__(self):
""" Number of dimensions associated with the dataset. """
return len(Dataset(self._id).shape)
+ @with_phil
def __iter__(self):
""" Iterate over the dimensions. """
for i in range(len(self)):
yield self[i]
+ @with_phil
def __repr__(self):
if not self._id:
return "<Dimensions of closed HDF5 dataset>"
return "<Dimensions of HDF5 object at %s>" % id(self._id)
def create_scale(self, dset, name=''):
- h5ds.set_scale(dset.id, self._e(name))
+ with phil:
+ h5ds.set_scale(dset.id, self._e(name))
diff --git a/h5py/_hl/files.py b/h5py/_hl/files.py
index 8bae42d..7985194 100644
--- a/h5py/_hl/files.py
+++ b/h5py/_hl/files.py
@@ -11,7 +11,7 @@ import weakref
import sys
import os
-from .base import HLObject, py3
+from .base import HLObject, py3, phil, with_phil
from .group import Group
from h5py import h5, h5f, h5p, h5i, h5fd, h5t, _objects
from h5py import version
@@ -29,7 +29,6 @@ libver_dict_r = dict((y, x) for x, y in libver_dict.iteritems())
def make_fapl(driver, libver, **kwds):
""" Set up a file access property list """
plist = h5p.create(h5p.FILE_ACCESS)
- plist.set_fclose_degree(h5f.CLOSE_STRONG)
if libver is not None:
if libver in libver_dict:
@@ -83,22 +82,37 @@ def make_fid(name, mode, userblock_size, fapl, fcpl=None):
fid = h5f.create(name, h5f.ACC_EXCL, fapl=fapl, fcpl=fcpl)
elif mode == 'w':
fid = h5f.create(name, h5f.ACC_TRUNC, fapl=fapl, fcpl=fcpl)
- elif mode == 'a' or mode is None:
+ elif mode == 'a':
+ # Open in append mode (read/write).
+ # If that fails, create a new file only if it won't clobber an
+ # existing one (ACC_EXCL)
try:
fid = h5f.open(name, h5f.ACC_RDWR, fapl=fapl)
- try:
- existing_fcpl = fid.get_create_plist()
- if (userblock_size is not None and
- existing_fcpl.get_userblock() != userblock_size):
- raise ValueError("Requested userblock size (%d) does not match that of existing file (%d)" % (userblock_size, existing_fcpl.get_userblock()))
- except:
- fid.close()
- raise
except IOError:
fid = h5f.create(name, h5f.ACC_EXCL, fapl=fapl, fcpl=fcpl)
+ elif mode is None:
+ # Try to open in append mode (read/write).
+ # If that fails, try readonly, and finally create a new file only
+ # if it won't clobber an existing file (ACC_EXCL).
+ try:
+ fid = h5f.open(name, h5f.ACC_RDWR, fapl=fapl)
+ except IOError:
+ try:
+ fid = h5f.open(name, h5f.ACC_RDONLY, fapl=fapl)
+ except IOError:
+ fid = h5f.create(name, h5f.ACC_EXCL, fapl=fapl, fcpl=fcpl)
else:
raise ValueError("Invalid mode; must be one of r, r+, w, w-, a")
+ try:
+ if userblock_size is not None:
+ existing_fcpl = fid.get_create_plist()
+ if existing_fcpl.get_userblock() != userblock_size:
+ raise ValueError("Requested userblock size (%d) does not match that of existing file (%d)" % (userblock_size, existing_fcpl.get_userblock()))
+ except:
+ fid.close()
+ raise
+
return fid
@@ -109,6 +123,7 @@ class File(Group):
"""
@property
+ @with_phil
def attrs(self):
""" Attributes attached to this object """
# hdf5 complains that a file identifier is an invalid location for an
@@ -117,6 +132,7 @@ class File(Group):
return attrs.AttributeManager(self['/'])
@property
+ @with_phil
def filename(self):
"""File name on disk"""
name = h5f.get_name(self.fid)
@@ -126,6 +142,7 @@ class File(Group):
return name
@property
+ @with_phil
def driver(self):
"""Low-level HDF5 file driver used to open file"""
drivers = {h5fd.SEC2: 'sec2', h5fd.STDIO: 'stdio',
@@ -135,23 +152,27 @@ class File(Group):
return drivers.get(self.fid.get_access_plist().get_driver(), 'unknown')
@property
+ @with_phil
def mode(self):
""" Python mode used to open file """
return {h5f.ACC_RDONLY: 'r',
h5f.ACC_RDWR: 'r+'}.get(self.fid.get_intent())
@property
+ @with_phil
def fid(self):
"""File ID (backwards compatibility) """
return self.id
@property
+ @with_phil
def libver(self):
"""File format version bounds (2-tuple: low, high)"""
bounds = self.id.get_access_plist().get_libver_bounds()
return tuple(libver_dict_r[x] for x in bounds)
@property
+ @with_phil
def userblock_size(self):
""" User block size (in bytes) """
fcpl = self.fid.get_create_plist()
@@ -161,12 +182,14 @@ class File(Group):
if mpi and hdf5_version >= (1, 8, 9):
@property
+ @with_phil
def atomic(self):
""" Set/get MPI-IO atomic mode
"""
return self.id.get_mpi_atomicity()
@atomic.setter
+ @with_phil
def atomic(self, value):
self.id.set_mpi_atomicity(value)
@@ -192,41 +215,63 @@ class File(Group):
Additional keywords
Passed on to the selected file driver.
"""
- if isinstance(name, _objects.ObjectID):
- fid = h5i.get_file_id(name)
- else:
- try:
- # If the byte string doesn't match the default
- # encoding, just pass it on as-is. Note Unicode
- # objects can always be encoded.
- name = name.encode(sys.getfilesystemencoding())
- except (UnicodeError, LookupError):
- pass
-
- fapl = make_fapl(driver, libver, **kwds)
- fid = make_fid(name, mode, userblock_size, fapl)
-
- Group.__init__(self, fid)
+ with phil:
+ if isinstance(name, _objects.ObjectID):
+ fid = h5i.get_file_id(name)
+ else:
+ try:
+ # If the byte string doesn't match the default
+ # encoding, just pass it on as-is. Note Unicode
+ # objects can always be encoded.
+ name = name.encode(sys.getfilesystemencoding())
+ except (UnicodeError, LookupError):
+ pass
+
+ fapl = make_fapl(driver, libver, **kwds)
+ fid = make_fid(name, mode, userblock_size, fapl)
+
+ Group.__init__(self, fid)
def close(self):
""" Close the file. All open objects become invalid """
- # TODO: find a way to square this with having issue 140
- # Not clearing shared state introduces a tiny memory leak, but
- # it goes like the number of files opened in a session.
- self.id.close()
+ with phil:
+ # We have to explicitly murder all open objects related to the file
+
+ # Close file-resident objects first, then the files.
+ # Otherwise we get errors in MPI mode.
+ id_list = h5f.get_obj_ids(self.id, ~h5f.OBJ_FILE)
+ file_list = h5f.get_obj_ids(self.id, h5f.OBJ_FILE)
+
+ id_list = [x for x in id_list if h5i.get_file_id(x).id == self.id.id]
+ file_list = [x for x in file_list if h5i.get_file_id(x).id == self.id.id]
+
+ for id_ in id_list:
+ while id_.valid:
+ h5i.dec_ref(id_)
+
+ for id_ in file_list:
+ while id_.valid:
+ h5i.dec_ref(id_)
+
+ self.id.close()
+ _objects.nonlocal_close()
def flush(self):
""" Tell the HDF5 library to flush its buffers.
"""
- h5f.flush(self.fid)
+ with phil:
+ h5f.flush(self.fid)
+ @with_phil
def __enter__(self):
return self
+ @with_phil
def __exit__(self, *args):
if self.id:
self.close()
+ @with_phil
def __repr__(self):
if not self.id:
r = u'<Closed HDF5 file>'
diff --git a/h5py/_hl/filters.py b/h5py/_hl/filters.py
index f81fa64..32e2719 100644
--- a/h5py/_hl/filters.py
+++ b/h5py/_hl/filters.py
@@ -99,7 +99,7 @@ def generate_dcpl(shape, dtype, chunks, compression, compression_opts,
if compression is not None:
- if compression not in encode:
+ if compression not in encode and not isinstance(compression, int):
raise ValueError('Compression filter "%s" is unavailable' % compression)
if compression == 'gzip':
@@ -194,6 +194,11 @@ def generate_dcpl(shape, dtype, chunks, compression, compression_opts,
elif compression == 'szip':
opts = {'ec': h5z.SZIP_EC_OPTION_MASK, 'nn': h5z.SZIP_NN_OPTION_MASK}
plist.set_szip(opts[szmethod], szpix)
+ elif isinstance(compression, int):
+ if not h5z.filter_avail(compression):
+ raise ValueError("Unknown compression filter number: %s" % compression)
+
+ plist.set_filter(compression, h5z.FLAG_OPTIONAL, compression_opts)
return plist
diff --git a/h5py/_hl/group.py b/h5py/_hl/group.py
index 2843b5e..6033c5f 100644
--- a/h5py/_hl/group.py
+++ b/h5py/_hl/group.py
@@ -14,7 +14,7 @@ import collections
from h5py import h5g, h5i, h5o, h5r, h5t, h5l, h5p
from . import base
-from .base import HLObject, DictCompat, py3
+from .base import HLObject, DictCompat, py3, phil, with_phil
from . import dataset
from . import datatype
@@ -27,9 +27,10 @@ class Group(HLObject, DictCompat):
def __init__(self, bind):
""" Create a new Group object by binding to a low-level GroupID.
"""
- if not isinstance(bind, h5g.GroupID):
- raise ValueError("%s is not a GroupID" % bind)
- HLObject.__init__(self, bind)
+ with phil:
+ if not isinstance(bind, h5g.GroupID):
+ raise ValueError("%s is not a GroupID" % bind)
+ HLObject.__init__(self, bind)
def create_group(self, name):
""" Create and return a new subgroup.
@@ -37,9 +38,10 @@ class Group(HLObject, DictCompat):
Name may be absolute or relative. Fails if the target name already
exists.
"""
- name, lcpl = self._e(name, lcpl=True)
- gid = h5g.create(self.id, name, lcpl=lcpl)
- return Group(gid)
+ with phil:
+ name, lcpl = self._e(name, lcpl=True)
+ gid = h5g.create(self.id, name, lcpl=lcpl)
+ return Group(gid)
def create_dataset(self, name, shape=None, dtype=None, data=None, **kwds):
""" Create a new HDF5 dataset
@@ -66,11 +68,14 @@ class Group(HLObject, DictCompat):
(Tuple) Make the dataset resizable up to this shape. Use None for
axes you want to be unlimited.
compression
- (String) Compression strategy. Legal values are 'gzip', 'szip',
- 'lzf'. Can also use an integer in range(10) indicating gzip.
+ (String or int) Compression strategy. Legal values are 'gzip',
+ 'szip', 'lzf'. If an integer in range(10), this indicates gzip
+ compression level. Otherwise, an integer indicates the number of a
+ dynamically loaded compression filter.
compression_opts
Compression settings. This is an integer for gzip, 2-tuple for
- szip, etc.
+ szip, etc. If specifying a dynamically loaded compression filter
+ number, this must be a tuple of values.
scaleoffset
(Integer) Enable scale/offset filter for (usually) lossy
compression of integer or floating-point data. For integer
@@ -90,12 +95,12 @@ class Group(HLObject, DictCompat):
track_times
(T/F) Enable dataset creation timestamps.
"""
-
- dsid = dataset.make_new_dset(self, shape, dtype, data, **kwds)
- dset = dataset.Dataset(dsid)
- if name is not None:
- self[name] = dset
- return dset
+ with phil:
+ dsid = dataset.make_new_dset(self, shape, dtype, data, **kwds)
+ dset = dataset.Dataset(dsid)
+ if name is not None:
+ self[name] = dset
+ return dset
def require_dataset(self, name, shape, dtype, exact=False, **kwds):
""" Open a dataset, creating it if it doesn't exist.
@@ -110,24 +115,24 @@ class Group(HLObject, DictCompat):
Raises TypeError if an incompatible object already exists, or if the
shape or dtype don't match according to the above rules.
"""
+ with phil:
+ if not name in self:
+ return self.create_dataset(name, *(shape, dtype), **kwds)
- if not name in self:
- return self.create_dataset(name, *(shape, dtype), **kwds)
-
- dset = self[name]
- if not isinstance(dset, dataset.Dataset):
- raise TypeError("Incompatible object (%s) already exists" % dset.__class__.__name__)
+ dset = self[name]
+ if not isinstance(dset, dataset.Dataset):
+ raise TypeError("Incompatible object (%s) already exists" % dset.__class__.__name__)
- if not shape == dset.shape:
- raise TypeError("Shapes do not match (existing %s vs new %s)" % (dset.shape, shape))
+ if not shape == dset.shape:
+ raise TypeError("Shapes do not match (existing %s vs new %s)" % (dset.shape, shape))
- if exact:
- if not dtype == dset.dtype:
- raise TypeError("Datatypes do not exactly match (existing %s vs new %s)" % (dset.dtype, dtype))
- elif not numpy.can_cast(dtype, dset.dtype):
- raise TypeError("Datatypes cannot be safely cast (existing %s vs new %s)" % (dset.dtype, dtype))
+ if exact:
+ if not dtype == dset.dtype:
+ raise TypeError("Datatypes do not exactly match (existing %s vs new %s)" % (dset.dtype, dtype))
+ elif not numpy.can_cast(dtype, dset.dtype):
+ raise TypeError("Datatypes cannot be safely cast (existing %s vs new %s)" % (dset.dtype, dtype))
- return dset
+ return dset
def require_group(self, name):
""" Return a group, creating it if it doesn't exist.
@@ -135,13 +140,15 @@ class Group(HLObject, DictCompat):
TypeError is raised if something with that name already exists that
isn't a group.
"""
- if not name in self:
- return self.create_group(name)
- grp = self[name]
- if not isinstance(grp, Group):
- raise TypeError("Incompatible object (%s) already exists" % grp.__class__.__name__)
- return grp
-
+ with phil:
+ if not name in self:
+ return self.create_group(name)
+ grp = self[name]
+ if not isinstance(grp, Group):
+ raise TypeError("Incompatible object (%s) already exists" % grp.__class__.__name__)
+ return grp
+
+ @with_phil
def __getitem__(self, name):
""" Open an object in the file """
@@ -186,45 +193,47 @@ class Group(HLObject, DictCompat):
>>> if cls == SoftLink:
... print '"foo" is a soft link!'
"""
- if not (getclass or getlink):
- try:
- return self[name]
- except KeyError:
+ with phil:
+ if not (getclass or getlink):
+ try:
+ return self[name]
+ except KeyError:
+ return default
+
+ if not name in self:
return default
- if not name in self:
- return default
-
- elif getclass and not getlink:
- typecode = h5o.get_info(self.id, self._e(name)).type
-
- try:
- return {h5o.TYPE_GROUP: Group,
- h5o.TYPE_DATASET: dataset.Dataset,
- h5o.TYPE_NAMED_DATATYPE: datatype.Datatype}[typecode]
- except KeyError:
- raise TypeError("Unknown object type")
-
- elif getlink:
- typecode = self.id.links.get_info(self._e(name)).type
-
- if typecode == h5l.TYPE_SOFT:
- if getclass:
- return SoftLink
- linkbytes = self.id.links.get_val(self._e(name))
- return SoftLink(self._d(linkbytes))
- elif typecode == h5l.TYPE_EXTERNAL:
- if getclass:
- return ExternalLink
- filebytes, linkbytes = self.id.links.get_val(self._e(name))
- # TODO: I think this is wrong,
- # we should use filesystem decoding on the filename
- return ExternalLink(self._d(filebytes), self._d(linkbytes))
- elif typecode == h5l.TYPE_HARD:
- return HardLink if getclass else HardLink()
- else:
- raise TypeError("Unknown link type")
-
+ elif getclass and not getlink:
+ typecode = h5o.get_info(self.id, self._e(name)).type
+
+ try:
+ return {h5o.TYPE_GROUP: Group,
+ h5o.TYPE_DATASET: dataset.Dataset,
+ h5o.TYPE_NAMED_DATATYPE: datatype.Datatype}[typecode]
+ except KeyError:
+ raise TypeError("Unknown object type")
+
+ elif getlink:
+ typecode = self.id.links.get_info(self._e(name)).type
+
+ if typecode == h5l.TYPE_SOFT:
+ if getclass:
+ return SoftLink
+ linkbytes = self.id.links.get_val(self._e(name))
+ return SoftLink(self._d(linkbytes))
+ elif typecode == h5l.TYPE_EXTERNAL:
+ if getclass:
+ return ExternalLink
+ filebytes, linkbytes = self.id.links.get_val(self._e(name))
+ # TODO: I think this is wrong,
+ # we should use filesystem decoding on the filename
+ return ExternalLink(self._d(filebytes), self._d(linkbytes))
+ elif typecode == h5l.TYPE_HARD:
+ return HardLink if getclass else HardLink()
+ else:
+ raise TypeError("Unknown link type")
+
+ @with_phil
def __setitem__(self, name, obj):
""" Add an object to the group. The name must not already be in use.
@@ -270,19 +279,23 @@ class Group(HLObject, DictCompat):
ds = self.create_dataset(None, data=obj, dtype=base.guess_dtype(obj))
h5o.link(ds.id, self.id, name, lcpl=lcpl)
+ @with_phil
def __delitem__(self, name):
""" Delete (unlink) an item from this group. """
self.id.unlink(self._e(name))
+ @with_phil
def __len__(self):
""" Number of members attached to this group """
return self.id.get_num_objs()
+ @with_phil
def __iter__(self):
""" Iterate over member names """
for x in self.id.__iter__():
yield self._d(x)
+ @with_phil
def __contains__(self, name):
""" Test if a member name exists """
return self._e(name) in self.id
@@ -325,46 +338,47 @@ class Group(HLObject, DictCompat):
['MyGroup', 'MyCopy']
"""
- if isinstance(source, HLObject):
- source_path = '.'
- else:
- # Interpret source as a path relative to this group
- source_path = source
- source = self
-
- if isinstance(dest, Group):
- if name is not None:
- dest_path = name
+ with phil:
+ if isinstance(source, HLObject):
+ source_path = '.'
else:
- # copy source into dest group: dest_name/source_name
- dest_path = pp.basename(h5i.get_name(source[source_path].id))
-
- elif isinstance(dest, HLObject):
- raise TypeError("Destination must be path or Group object")
- else:
- # Interpret destination as a path relative to this group
- dest_path = dest
- dest = self
-
- flags = 0
- if shallow:
- flags |= h5o.COPY_SHALLOW_HIERARCHY_FLAG
- if expand_soft:
- flags |= h5o.COPY_EXPAND_SOFT_LINK_FLAG
- if expand_external:
- flags |= h5o.COPY_EXPAND_EXT_LINK_FLAG
- if expand_refs:
- flags |= h5o.COPY_EXPAND_REFERENCE_FLAG
- if without_attrs:
- flags |= h5o.COPY_WITHOUT_ATTR_FLAG
- if flags:
- copypl = h5p.create(h5p.OBJECT_COPY)
- copypl.set_copy_object(flags)
- else:
- copypl = None
+ # Interpret source as a path relative to this group
+ source_path = source
+ source = self
+
+ if isinstance(dest, Group):
+ if name is not None:
+ dest_path = name
+ else:
+ # copy source into dest group: dest_name/source_name
+ dest_path = pp.basename(h5i.get_name(source[source_path].id))
+
+ elif isinstance(dest, HLObject):
+ raise TypeError("Destination must be path or Group object")
+ else:
+ # Interpret destination as a path relative to this group
+ dest_path = dest
+ dest = self
+
+ flags = 0
+ if shallow:
+ flags |= h5o.COPY_SHALLOW_HIERARCHY_FLAG
+ if expand_soft:
+ flags |= h5o.COPY_EXPAND_SOFT_LINK_FLAG
+ if expand_external:
+ flags |= h5o.COPY_EXPAND_EXT_LINK_FLAG
+ if expand_refs:
+ flags |= h5o.COPY_EXPAND_REFERENCE_FLAG
+ if without_attrs:
+ flags |= h5o.COPY_WITHOUT_ATTR_FLAG
+ if flags:
+ copypl = h5p.create(h5p.OBJECT_COPY)
+ copypl.set_copy_object(flags)
+ else:
+ copypl = None
- h5o.copy(source.id, self._e(source_path), dest.id, self._e(dest_path),
- copypl, base.dlcpl)
+ h5o.copy(source.id, self._e(source_path), dest.id, self._e(dest_path),
+ copypl, base.dlcpl)
def move(self, source, dest):
""" Move a link to a new location in the file.
@@ -373,10 +387,11 @@ class Group(HLObject, DictCompat):
"source" is a soft or external link, the link itself is moved, with its
value unmodified.
"""
- if source == dest:
- return
- self.id.links.move(self._e(source), self.id, self._e(dest),
- lapl=self._lapl, lcpl=self._lcpl)
+ with phil:
+ if source == dest:
+ return
+ self.id.links.move(self._e(source), self.id, self._e(dest),
+ lapl=self._lapl, lcpl=self._lcpl)
def visit(self, func):
""" Recursively visit all names in this group and subgroups (HDF5 1.8).
@@ -398,9 +413,10 @@ class Group(HLObject, DictCompat):
>>> list_of_names = []
>>> f.visit(list_of_names.append)
"""
- def proxy(name):
- return func(self._d(name))
- return h5o.visit(self.id, proxy)
+ with phil:
+ def proxy(name):
+ return func(self._d(name))
+ return h5o.visit(self.id, proxy)
def visititems(self, func):
""" Recursively visit names and objects in this group (HDF5 1.8).
@@ -426,11 +442,13 @@ class Group(HLObject, DictCompat):
>>> f = File('foo.hdf5')
>>> f.visititems(func)
"""
- def proxy(name):
- name = self._d(name)
- return func(name, self[name])
- return h5o.visit(self.id, proxy)
+ with phil:
+ def proxy(name):
+ name = self._d(name)
+ return func(name, self[name])
+ return h5o.visit(self.id, proxy)
+ @with_phil
def __repr__(self):
if not self:
r = u"<Closed HDF5 group>"
diff --git a/h5py/_hl/selections2.py b/h5py/_hl/selections2.py
index b9c945c..c6ce8ac 100644
--- a/h5py/_hl/selections2.py
+++ b/h5py/_hl/selections2.py
@@ -10,23 +10,6 @@
import numpy as np
from h5py import h5s
-def strip_fields(basetype):
- """ Convenience function to recursively strip extra dtype information
- from special types """
-
- if basetype.kind == 'O':
- return np.dtype('O')
-
- if basetype.fields is not None:
- fields = []
- for name in basetype.names:
- subtype, meta = basetype.fields[name]
- subtype = strip_fields(subtype)
- fields.append((name, subtype))
- return np.dtype(fields)
-
- return basetype
-
def read_dtypes(dataset_dtype, names):
""" Returns a 2-tuple containing:
@@ -53,10 +36,6 @@ def read_dtypes(dataset_dtype, names):
else:
output_dtype = format_dtype
- # The field metadata for special types screws up NumPy indexing
- # (issues 181 and 202)
- output_dtype = strip_fields(output_dtype)
-
return output_dtype, format_dtype
diff --git a/h5py/_hl/tests/__init__.py b/h5py/_hl/tests/__init__.py
deleted file mode 100644
index a23327b..0000000
--- a/h5py/_hl/tests/__init__.py
+++ /dev/null
@@ -1,8 +0,0 @@
-# This file is part of h5py, a Python interface to the HDF5 library.
-#
-# http://www.h5py.org
-#
-# Copyright 2008-2013 Andrew Collette and contributors
-#
-# License: Standard 3-clause BSD; see "license.txt" for full license terms
-# and contributor agreement.
diff --git a/h5py/_locks.pxi b/h5py/_locks.pxi
index 8438754..6672b58 100644
--- a/h5py/_locks.pxi
+++ b/h5py/_locks.pxi
@@ -1,3 +1,11 @@
+cdef class BogoLock:
+
+ def __enter__(self):
+ pass
+
+ def __exit__(self, *args):
+ pass
+
## {{{ http://code.activestate.com/recipes/577336/ (r3)
from cpython cimport pythread
from cpython.exc cimport PyErr_NoMemory
diff --git a/h5py/_objects.c b/h5py/_objects.c
deleted file mode 100644
index bf74949..0000000
--- a/h5py/_objects.c
+++ /dev/null
@@ -1,6678 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
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- PyErr_Restore(etype, eval, etb);
- }
- if (p->__weakref__) PyObject_ClearWeakRefs(o);
- Py_CLEAR(p->_hash);
- PyObject_GC_Track(o);
- (*Py_TYPE(o)->tp_free)(o);
-}
-
-static int __pyx_tp_traverse_4h5py_8_objects_ObjectID(PyObject *o, visitproc v, void *a) {
- int e;
- struct __pyx_obj_4h5py_8_objects_ObjectID *p = (struct __pyx_obj_4h5py_8_objects_ObjectID *)o;
- if (p->_hash) {
- e = (*v)(p->_hash, a); if (e) return e;
- }
- return 0;
-}
-
-static int __pyx_tp_clear_4h5py_8_objects_ObjectID(PyObject *o) {
- struct __pyx_obj_4h5py_8_objects_ObjectID *p = (struct __pyx_obj_4h5py_8_objects_ObjectID *)o;
- PyObject* tmp;
- tmp = ((PyObject*)p->_hash);
- p->_hash = Py_None; Py_INCREF(Py_None);
- Py_XDECREF(tmp);
- return 0;
-}
-
-static PyObject *__pyx_getprop_4h5py_8_objects_8ObjectID_fileno(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_8_objects_8ObjectID_6fileno_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_8_objects_8ObjectID_valid(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_8_objects_8ObjectID_5valid_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_8_objects_8ObjectID_id(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_8_objects_8ObjectID_2id_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_8_objects_8ObjectID_locked(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_8_objects_8ObjectID_6locked_1__get__(o);
-}
-
-static int __pyx_setprop_4h5py_8_objects_8ObjectID_locked(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
- if (v) {
- return __pyx_pw_4h5py_8_objects_8ObjectID_6locked_3__set__(o, v);
- }
- else {
- PyErr_SetString(PyExc_NotImplementedError, "__del__");
- return -1;
- }
-}
-
-static PyMethodDef __pyx_methods_4h5py_8_objects_ObjectID[] = {
- {__Pyx_NAMESTR("__copy__"), (PyCFunction)__pyx_pw_4h5py_8_objects_8ObjectID_7__copy__, METH_NOARGS, __Pyx_DOCSTR(0)},
- {__Pyx_NAMESTR("open"), (PyCFunction)__pyx_pw_4h5py_8_objects_8ObjectID_13open, METH_O, __Pyx_DOCSTR(__pyx_doc_4h5py_8_objects_8ObjectID_12open)},
- {0, 0, 0, 0}
-};
-
-static struct PyGetSetDef __pyx_getsets_4h5py_8_objects_ObjectID[] = {
- {(char *)"fileno", __pyx_getprop_4h5py_8_objects_8ObjectID_fileno, 0, 0, 0},
- {(char *)"valid", __pyx_getprop_4h5py_8_objects_8ObjectID_valid, 0, 0, 0},
- {(char *)"id", __pyx_getprop_4h5py_8_objects_8ObjectID_id, 0, 0, 0},
- {(char *)"locked", __pyx_getprop_4h5py_8_objects_8ObjectID_locked, __pyx_setprop_4h5py_8_objects_8ObjectID_locked, 0, 0},
- {0, 0, 0, 0, 0}
-};
-
-static PyNumberMethods __pyx_tp_as_number_ObjectID = {
- 0, /*nb_add*/
- 0, /*nb_subtract*/
- 0, /*nb_multiply*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_divide*/
- #endif
- 0, /*nb_remainder*/
- 0, /*nb_divmod*/
- 0, /*nb_power*/
- 0, /*nb_negative*/
- 0, /*nb_positive*/
- 0, /*nb_absolute*/
- __pyx_pw_4h5py_8_objects_8ObjectID_5__nonzero__, /*nb_nonzero*/
- 0, /*nb_invert*/
- 0, /*nb_lshift*/
- 0, /*nb_rshift*/
- 0, /*nb_and*/
- 0, /*nb_xor*/
- 0, /*nb_or*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_coerce*/
- #endif
- 0, /*nb_int*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_long*/
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- 0, /*reserved*/
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- 0, /*nb_float*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_oct*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_hex*/
- #endif
- 0, /*nb_inplace_add*/
- 0, /*nb_inplace_subtract*/
- 0, /*nb_inplace_multiply*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_inplace_divide*/
- #endif
- 0, /*nb_inplace_remainder*/
- 0, /*nb_inplace_power*/
- 0, /*nb_inplace_lshift*/
- 0, /*nb_inplace_rshift*/
- 0, /*nb_inplace_and*/
- 0, /*nb_inplace_xor*/
- 0, /*nb_inplace_or*/
- 0, /*nb_floor_divide*/
- 0, /*nb_true_divide*/
- 0, /*nb_inplace_floor_divide*/
- 0, /*nb_inplace_true_divide*/
- #if PY_VERSION_HEX >= 0x02050000
- 0, /*nb_index*/
- #endif
-};
-
-static PySequenceMethods __pyx_tp_as_sequence_ObjectID = {
- 0, /*sq_length*/
- 0, /*sq_concat*/
- 0, /*sq_repeat*/
- 0, /*sq_item*/
- 0, /*sq_slice*/
- 0, /*sq_ass_item*/
- 0, /*sq_ass_slice*/
- 0, /*sq_contains*/
- 0, /*sq_inplace_concat*/
- 0, /*sq_inplace_repeat*/
-};
-
-static PyMappingMethods __pyx_tp_as_mapping_ObjectID = {
- 0, /*mp_length*/
- 0, /*mp_subscript*/
- 0, /*mp_ass_subscript*/
-};
-
-static PyBufferProcs __pyx_tp_as_buffer_ObjectID = {
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getreadbuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getwritebuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getsegcount*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getcharbuffer*/
- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_getbuffer*/
- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_releasebuffer*/
- #endif
-};
-
-static PyTypeObject __pyx_type_4h5py_8_objects_ObjectID = {
- PyVarObject_HEAD_INIT(0, 0)
- __Pyx_NAMESTR("h5py._objects.ObjectID"), /*tp_name*/
- sizeof(struct __pyx_obj_4h5py_8_objects_ObjectID), /*tp_basicsize*/
- 0, /*tp_itemsize*/
- __pyx_tp_dealloc_4h5py_8_objects_ObjectID, /*tp_dealloc*/
- 0, /*tp_print*/
- 0, /*tp_getattr*/
- 0, /*tp_setattr*/
- #if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
- #else
- 0, /*reserved*/
- #endif
- 0, /*tp_repr*/
- &__pyx_tp_as_number_ObjectID, /*tp_as_number*/
- &__pyx_tp_as_sequence_ObjectID, /*tp_as_sequence*/
- &__pyx_tp_as_mapping_ObjectID, /*tp_as_mapping*/
- __pyx_pw_4h5py_8_objects_8ObjectID_11__hash__, /*tp_hash*/
- 0, /*tp_call*/
- 0, /*tp_str*/
- 0, /*tp_getattro*/
- 0, /*tp_setattro*/
- &__pyx_tp_as_buffer_ObjectID, /*tp_as_buffer*/
- Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
- __Pyx_DOCSTR("\n Represents an HDF5 identifier.\n\n "), /*tp_doc*/
- __pyx_tp_traverse_4h5py_8_objects_ObjectID, /*tp_traverse*/
- __pyx_tp_clear_4h5py_8_objects_ObjectID, /*tp_clear*/
- __pyx_pw_4h5py_8_objects_8ObjectID_9__richcmp__, /*tp_richcompare*/
- 0, /*tp_weaklistoffset*/
- 0, /*tp_iter*/
- 0, /*tp_iternext*/
- __pyx_methods_4h5py_8_objects_ObjectID, /*tp_methods*/
- 0, /*tp_members*/
- __pyx_getsets_4h5py_8_objects_ObjectID, /*tp_getset*/
- 0, /*tp_base*/
- 0, /*tp_dict*/
- 0, /*tp_descr_get*/
- 0, /*tp_descr_set*/
- 0, /*tp_dictoffset*/
- 0, /*tp_init*/
- 0, /*tp_alloc*/
- __pyx_tp_new_4h5py_8_objects_ObjectID, /*tp_new*/
- 0, /*tp_free*/
- 0, /*tp_is_gc*/
- 0, /*tp_bases*/
- 0, /*tp_mro*/
- 0, /*tp_cache*/
- 0, /*tp_subclasses*/
- 0, /*tp_weaklist*/
- 0, /*tp_del*/
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*tp_version_tag*/
- #endif
-};
-
-static PyObject *__pyx_tp_new_4h5py_8_objects_FastRLock(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
- PyObject *o = (*t->tp_alloc)(t, 0);
- if (!o) return 0;
- if (__pyx_pw_4h5py_8_objects_9FastRLock_1__cinit__(o, __pyx_empty_tuple, NULL) < 0) {
- Py_DECREF(o); o = 0;
- }
- return o;
-}
-
-static void __pyx_tp_dealloc_4h5py_8_objects_FastRLock(PyObject *o) {
- {
- PyObject *etype, *eval, *etb;
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- ++Py_REFCNT(o);
- __pyx_pw_4h5py_8_objects_9FastRLock_3__dealloc__(o);
- if (PyErr_Occurred()) PyErr_WriteUnraisable(o);
- --Py_REFCNT(o);
- PyErr_Restore(etype, eval, etb);
- }
- (*Py_TYPE(o)->tp_free)(o);
-}
-
-static PyMethodDef __pyx_methods_4h5py_8_objects_FastRLock[] = {
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- {__Pyx_NAMESTR("release"), (PyCFunction)__pyx_pw_4h5py_8_objects_9FastRLock_7release, METH_NOARGS, __Pyx_DOCSTR(0)},
- {__Pyx_NAMESTR("__enter__"), (PyCFunction)__pyx_pw_4h5py_8_objects_9FastRLock_9__enter__, METH_NOARGS, __Pyx_DOCSTR(0)},
- {__Pyx_NAMESTR("__exit__"), (PyCFunction)__pyx_pw_4h5py_8_objects_9FastRLock_11__exit__, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)},
- {__Pyx_NAMESTR("_is_owned"), (PyCFunction)__pyx_pw_4h5py_8_objects_9FastRLock_13_is_owned, METH_NOARGS, __Pyx_DOCSTR(0)},
- {0, 0, 0, 0}
-};
-
-static PyNumberMethods __pyx_tp_as_number_FastRLock = {
- 0, /*nb_add*/
- 0, /*nb_subtract*/
- 0, /*nb_multiply*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_divide*/
- #endif
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- 0, /*nb_power*/
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- 0, /*nb_absolute*/
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- #if PY_MAJOR_VERSION < 3
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- #if PY_MAJOR_VERSION < 3
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- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_hex*/
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- #if PY_MAJOR_VERSION < 3
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- 0, /*nb_inplace_xor*/
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-
-static PySequenceMethods __pyx_tp_as_sequence_FastRLock = {
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-
-static PyMappingMethods __pyx_tp_as_mapping_FastRLock = {
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- 0, /*mp_ass_subscript*/
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-
-static PyBufferProcs __pyx_tp_as_buffer_FastRLock = {
- #if PY_MAJOR_VERSION < 3
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- #if PY_MAJOR_VERSION < 3
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- 0, /*bf_releasebuffer*/
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-static PyTypeObject __pyx_type_4h5py_8_objects_FastRLock = {
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- __Pyx_NAMESTR("h5py._objects.FastRLock"), /*tp_name*/
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- 0, /*tp_itemsize*/
- __pyx_tp_dealloc_4h5py_8_objects_FastRLock, /*tp_dealloc*/
- 0, /*tp_print*/
- 0, /*tp_getattr*/
- 0, /*tp_setattr*/
- #if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
- #else
- 0, /*reserved*/
- #endif
- 0, /*tp_repr*/
- &__pyx_tp_as_number_FastRLock, /*tp_as_number*/
- &__pyx_tp_as_sequence_FastRLock, /*tp_as_sequence*/
- &__pyx_tp_as_mapping_FastRLock, /*tp_as_mapping*/
- 0, /*tp_hash*/
- 0, /*tp_call*/
- 0, /*tp_str*/
- 0, /*tp_getattro*/
- 0, /*tp_setattro*/
- &__pyx_tp_as_buffer_FastRLock, /*tp_as_buffer*/
- Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/
- __Pyx_DOCSTR("Fast, re-entrant locking.\n\n Under uncongested conditions, the lock is never acquired but only\n counted. Only when a second thread comes in and notices that the\n lock is needed, it acquires the lock and notifies the first thread\n to release it when it's done. This is all made possible by the\n wonderful GIL.\n "), /*tp_doc*/
- 0, /*tp_traverse*/
- 0, /*tp_clear*/
- 0, /*tp_richcompare*/
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- __pyx_methods_4h5py_8_objects_FastRLock, /*tp_methods*/
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- __pyx_tp_new_4h5py_8_objects_FastRLock, /*tp_new*/
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-static PyObject *__pyx_tp_new_4h5py_8_objects__Registry(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
- struct __pyx_obj_4h5py_8_objects__Registry *p;
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- p->_data = Py_None; Py_INCREF(Py_None);
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- if (__pyx_pw_4h5py_8_objects_9_Registry_1__cinit__(o, __pyx_empty_tuple, NULL) < 0) {
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-
-static void __pyx_tp_dealloc_4h5py_8_objects__Registry(PyObject *o) {
- struct __pyx_obj_4h5py_8_objects__Registry *p = (struct __pyx_obj_4h5py_8_objects__Registry *)o;
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- (*Py_TYPE(o)->tp_free)(o);
-}
-
-static int __pyx_tp_traverse_4h5py_8_objects__Registry(PyObject *o, visitproc v, void *a) {
- int e;
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- }
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- return 0;
-}
-
-static int __pyx_tp_clear_4h5py_8_objects__Registry(PyObject *o) {
- struct __pyx_obj_4h5py_8_objects__Registry *p = (struct __pyx_obj_4h5py_8_objects__Registry *)o;
- PyObject* tmp;
- tmp = ((PyObject*)p->_data);
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-}
-static PyObject *__pyx_sq_item_4h5py_8_objects__Registry(PyObject *o, Py_ssize_t i) {
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-}
-
-static int __pyx_mp_ass_subscript_4h5py_8_objects__Registry(PyObject *o, PyObject *i, PyObject *v) {
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-static PyObject *__pyx_getprop_4h5py_8_objects_9_Registry_lock(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyMethodDef __pyx_methods_4h5py_8_objects__Registry[] = {
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- {0, 0, 0, 0}
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-static struct PyGetSetDef __pyx_getsets_4h5py_8_objects__Registry[] = {
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- {0, 0, 0, 0, 0}
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-
-static PyNumberMethods __pyx_tp_as_number__Registry = {
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- #if PY_MAJOR_VERSION < 3
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- #endif
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- 0, /*nb_power*/
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- #if PY_MAJOR_VERSION < 3
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- #if PY_MAJOR_VERSION < 3
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-
-static PySequenceMethods __pyx_tp_as_sequence__Registry = {
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-static PyMappingMethods __pyx_tp_as_mapping__Registry = {
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-{
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-{
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- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
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-bad:
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-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
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-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
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- }
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- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
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- type = 0;
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- #else
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- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
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- __Pyx_ErrRestore(type, value, tb);
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-raise_error:
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- Py_XDECREF(type);
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-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
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- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
- if (unlikely(!type)) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (likely(PyObject_TypeCheck(obj, type)))
- return 1;
- PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
- Py_TYPE(obj)->tp_name, type->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static PyObject* __Pyx_Method_ClassMethod(PyObject *method) {
-#if CYTHON_COMPILING_IN_PYPY
- if (PyObject_TypeCheck(method, &PyWrapperDescr_Type)) { /* cdef classes */
- return PyClassMethod_New(method);
- }
-#else
- static PyTypeObject *methoddescr_type = NULL;
- if (methoddescr_type == NULL) {
- PyObject *meth = __Pyx_GetAttrString((PyObject*)&PyList_Type, "append");
- if (!meth) return NULL;
- methoddescr_type = Py_TYPE(meth);
- Py_DECREF(meth);
- }
- if (PyObject_TypeCheck(method, methoddescr_type)) { /* cdef classes */
- PyMethodDescrObject *descr = (PyMethodDescrObject *)method;
- #if PY_VERSION_HEX < 0x03020000
- PyTypeObject *d_type = descr->d_type;
- #else
- PyTypeObject *d_type = descr->d_common.d_type;
- #endif
- return PyDescr_NewClassMethod(d_type, descr->d_method);
- }
-#endif
- else if (PyMethod_Check(method)) { /* python classes */
- return PyClassMethod_New(PyMethod_GET_FUNCTION(method));
- }
- else if (PyCFunction_Check(method)) {
- return PyClassMethod_New(method);
- }
-#ifdef __Pyx_CyFunction_USED
- else if (PyObject_TypeCheck(method, __pyx_CyFunctionType)) {
- return PyClassMethod_New(method);
- }
-#endif
- PyErr_Format(PyExc_TypeError,
- "Class-level classmethod() can only be called on "
- "a method_descriptor or instance method.");
- return NULL;
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/_objects.pxd b/h5py/_objects.pxd
index 3e19c84..ed7407e 100644
--- a/h5py/_objects.pxd
+++ b/h5py/_objects.pxd
@@ -13,7 +13,7 @@ cdef class ObjectID:
cdef object __weakref__
cdef readonly hid_t id
- cdef public int locked
+ cdef public int locked # Cannot be closed, explicitly or auto
cdef object _hash
# Convenience functions
diff --git a/h5py/_objects.pyx b/h5py/_objects.pyx
index 6134173..6c42d43 100644
--- a/h5py/_objects.pyx
+++ b/h5py/_objects.pyx
@@ -8,211 +8,139 @@
# and contributor agreement.
"""
- Implements ObjectID base class and global object registry.
-
- It used to be that we could store the HDF5 identifier in an ObjectID
- and simply close it when the object was deallocated. However, since
- HDF5 1.8.5 they have started recycling object identifiers, which
- breaks this system.
-
- We now use a global registry of object identifiers. This is implemented
- via a dictionary which maps an integer representation of the identifier
- to a weak reference of an ObjectID. There is only one ObjectID instance
- in the universe for each integer identifier. When the HDF5 reference
- count for a identifier reaches zero, HDF5 closes the object and reclaims
- the identifier. When this occurs, the identifier and weak reference must
- be deleted from the registry. If an ObjectID is deallocated, it is deleted
- from the registry and the HDF5 reference count is decreased, HDF5 closes
- and reclaims the identifier for future use.
-
- All interactions with the registry must be synchronized for thread safety.
- You must acquire "registry.lock" before interacting with the registry. The
- registry is not internally synchronized, in the interest of performance: we
- don't want the same thread attempting to acquire the lock multiple times
- during a single operation, if we can avoid it.
-
- All ObjectIDs and subclasses thereof should be opened with the "open"
- classmethod factory function, such that an existing ObjectID instance can
- be returned from the registry when appropriate.
+ Implements ObjectID base class.
"""
+include "_locks.pxi"
from defs cimport *
-from weakref import KeyedRef, ref
+DEF USE_LOCKING = True
+DEF DEBUG_ID = False
-## {{{ http://code.activestate.com/recipes/577336/ (r3)
-from cpython cimport pythread
-from cpython.exc cimport PyErr_NoMemory
+# --- Locking code ------------------------------------------------------------
+#
+# Most of the functions and methods in h5py spend all their time in the Cython
+# code for h5py, and hold the GIL until they exit. However, in some cases,
+# particularly when calling native-Python functions from the stdlib or
+# elsewhere, the GIL can be released mid-function and another thread can
+# call into the API at the same time.
+#
+# This is bad news, especially for the object identifier registry.
+#
+# We serialize all access to the low-level API with a single recursive lock.
+# Only one thread at a time can call any low-level routine.
+#
+# Note that this doesn't affect other applications like PyTables which are
+# interacting with HDF5. In the case of the identifier registry, this means
+# that it's possible for an identifier to go stale and for PyTables to reuse
+# it before we've had a chance to set obj.id = 0. For this reason, h5py is
+# advertised for EITHER multithreaded use OR use alongside PyTables/NetCDF4,
+# but not both at the same time.
+
+IF USE_LOCKING:
+ cdef FastRLock _phil = FastRLock()
+ELSE:
+ cdef BogoLock _phil = BogoLock()
+
+# Python alias for access from other modules
+phil = _phil
+
+def with_phil(func):
+ """ Locking decorator """
-cdef class FastRLock:
- """Fast, re-entrant locking.
+ import functools
- Under uncongested conditions, the lock is never acquired but only
- counted. Only when a second thread comes in and notices that the
- lock is needed, it acquires the lock and notifies the first thread
- to release it when it's done. This is all made possible by the
- wonderful GIL.
+ def wrapper(*args, **kwds):
+ with _phil:
+ return func(*args, **kwds)
+
+ functools.update_wrapper(wrapper, func, ('__name__', '__doc__'))
+ return wrapper
+
+# --- End locking code --------------------------------------------------------
+
+
+# --- Registry code ----------------------------------------------------------
+#
+# With HDF5 1.8, when an identifier is closed its value may be immediately
+# re-used for a new object. This leads to odd behavior when an ObjectID
+# with an old identifier is left hanging around... for example, a GroupID
+# belonging to a closed file could suddenly "mutate" into one from a
+# different file.
+#
+# There are two ways such "zombie" identifiers can arise. The first is if
+# an identifier is explicitly closed via obj._close(). For this case we
+# set obj.id = 0. The second is that certain actions in HDF5 can *remotely*
+# invalidate identifiers. For example, closing a file opened with
+# H5F_CLOSE_STRONG will also close open groups, etc.
+#
+# When such a "nonlocal" event occurs, we have to examine all live ObjectID
+# instances, and manually set obj.id = 0. That's what the function
+# nonlocal_close() does. We maintain an inventory of all live ObjectID
+# instances in the registry dict. Then, when a nonlocal event occurs,
+# nonlocal_close() walks through the inventory and sets the stale identifiers
+# to 0. It must be explictly called; currently, this happens in FileID.close()
+# as well as the high-level File.close().
+#
+# The entire low-level API is now explicitly locked, so only one thread at at
+# time is taking actions that may create or invalidate identifiers. See the
+# "locking code" section above.
+#
+# See also __cinit__ and __dealloc__ for class ObjectID.
+
+import weakref
+import warnings
+
+# Will map id(obj) -> weakref(obj), where obj is an ObjectID instance.
+# Objects are added only via ObjectID.__cinit__, and removed only by
+# ObjectID.__dealloc__.
+cdef dict registry = {}
+
+ at with_phil
+def print_reg():
+ import h5py
+ refs = registry.values()
+ objs = [r() for r in refs]
+
+ none = len([x for x in objs if x is None])
+ files = len([x for x in objs if isinstance(x, h5py.h5f.FileID)])
+ groups = len([x for x in objs if isinstance(x, h5py.h5g.GroupID)])
+
+ print "REGISTRY: %d | %d None | %d FileID | %d GroupID" % (len(objs), none, files, groups)
+
+
+ at with_phil
+def nonlocal_close():
+ """ Find dead ObjectIDs and set their integer identifiers to 0.
"""
- cdef pythread.PyThread_type_lock _real_lock
- cdef long _owner # ID of thread owning the lock
- cdef int _count # re-entry count
- cdef int _pending_requests # number of pending requests for real lock
- cdef bint _is_locked # whether the real lock is acquired
-
- def __cinit__(self):
- self._owner = -1
- self._count = 0
- self._is_locked = False
- self._pending_requests = 0
- self._real_lock = pythread.PyThread_allocate_lock()
- if self._real_lock is NULL:
- PyErr_NoMemory()
+ cdef ObjectID obj
- def __dealloc__(self):
- if self._real_lock is not NULL:
- pythread.PyThread_free_lock(self._real_lock)
- self._real_lock = NULL
-
- def acquire(self, bint blocking=True):
- return lock_lock(self, pythread.PyThread_get_thread_ident(), blocking)
-
- def release(self):
- if self._owner != pythread.PyThread_get_thread_ident():
- raise RuntimeError("cannot release un-acquired lock")
- unlock_lock(self)
-
- # compatibility with threading.RLock
-
- def __enter__(self):
- # self.acquire()
- return lock_lock(self, pythread.PyThread_get_thread_ident(), True)
-
- def __exit__(self, t, v, tb):
- # self.release()
- if self._owner != pythread.PyThread_get_thread_ident():
- raise RuntimeError("cannot release un-acquired lock")
- unlock_lock(self)
-
- def _is_owned(self):
- return self._owner == pythread.PyThread_get_thread_ident()
-
-
-cdef inline bint lock_lock(FastRLock lock, long current_thread, bint blocking) nogil:
- # Note that this function *must* hold the GIL when being called.
- # We just use 'nogil' in the signature to make sure that no Python
- # code execution slips in that might free the GIL
-
- if lock._count:
- # locked! - by myself?
- if current_thread == lock._owner:
- lock._count += 1
- return 1
- elif not lock._pending_requests:
- # not locked, not requested - go!
- lock._owner = current_thread
- lock._count = 1
- return 1
- # need to get the real lock
- return _acquire_lock(
- lock, current_thread,
- pythread.WAIT_LOCK if blocking else pythread.NOWAIT_LOCK)
-
-cdef bint _acquire_lock(FastRLock lock, long current_thread, int wait) nogil:
- # Note that this function *must* hold the GIL when being called.
- # We just use 'nogil' in the signature to make sure that no Python
- # code execution slips in that might free the GIL
-
- if not lock._is_locked and not lock._pending_requests:
- # someone owns it but didn't acquire the real lock - do that
- # now and tell the owner to release it when done. Note that we
- # do not release the GIL here as we must absolutely be the one
- # who acquires the lock now.
- if not pythread.PyThread_acquire_lock(lock._real_lock, wait):
- return 0
- #assert not lock._is_locked
- lock._is_locked = True
- lock._pending_requests += 1
- with nogil:
- # wait for the lock owning thread to release it
- locked = pythread.PyThread_acquire_lock(lock._real_lock, wait)
- lock._pending_requests -= 1
- #assert not lock._is_locked
- #assert lock._count == 0
- if not locked:
- return 0
- lock._is_locked = True
- lock._owner = current_thread
- lock._count = 1
- return 1
-
-cdef inline void unlock_lock(FastRLock lock) nogil:
- # Note that this function *must* hold the GIL when being called.
- # We just use 'nogil' in the signature to make sure that no Python
- # code execution slips in that might free the GIL
-
- #assert lock._owner == pythread.PyThread_get_thread_ident()
- #assert lock._count > 0
- lock._count -= 1
- if lock._count == 0:
- lock._owner = -1
- if lock._is_locked:
- pythread.PyThread_release_lock(lock._real_lock)
- lock._is_locked = False
-## end of http://code.activestate.com/recipes/577336/ }}}
-
-
-cdef class _Registry:
-
- cdef object _data
- cdef readonly FastRLock lock
-
- def __cinit__(self):
- self._data = {}
- self.lock = FastRLock()
-
- __hash__ = None # Avoid Py3 warning
-
- def cleanup(self):
- "Manage invalid identifiers"
- deadlist = []
- for key in self._data:
- val = self._data[key]
- val = val()
- if val is None:
- deadlist.append(key)
- continue
- if not val.valid:
- deadlist.append(key)
- for key in deadlist:
- del self._data[key]
-
- def __getitem__(self, key):
- o = self._data[key]()
- if o is None:
- # This would occur if we had open objects and closed their
- # file, causing the objects identifiers to be reclaimed.
- # Now we clean up the registry when we close a file (or any
- # other identifier, for that matter), so in practice this
- # condition never obtains.
- del self._data[key]
- # We need to raise a KeyError:
- o = self._data[key]()
- return o
-
- def __setitem__(self, key, val):
- # this method should only be called by ObjectID.open
- self._data[key] = ref(val)
-
- def __delitem__(self, key):
- # we need to synchronize removal of the id from the
- # registry with decreasing the HDF5 reference count:
- self._data.pop(key,None)
-
- if H5Iget_type(key) >= 0: # if not, object was explicitly closed
- H5Idec_ref(key)
-
-
-registry = _Registry()
+ for python_id, ref in registry.items():
+
+ obj = ref()
+
+ # Object somehow died without being removed from the registry.
+ # I think this is impossible, but let's make sure.
+ if obj is None:
+ warnings.warn("Found murdered identifier %d of kind %s HDF5 id %d" %
+ (python_id, type(obj), obj.id), RuntimeWarning)
+ del registry[python_id]
+ continue
+
+ # Locked objects are immortal, as they generally are provided by
+ # the HDF5 library itself (property list classes, etc.).
+ if obj.locked:
+ continue
+
+ # Invalid object; set obj.id = 0 so it doesn't become a zombie
+ if not H5Iis_valid(obj.id):
+ IF DEBUG_ID:
+ print("NONLOCAL - invalidating %d of kind %s HDF5 id %d" %
+ (python_id, type(obj), obj.id) )
+ obj.id = 0
+ continue
+
+# --- End registry code -------------------------------------------------------
cdef class ObjectID:
@@ -225,40 +153,76 @@ cdef class ObjectID:
property fileno:
def __get__(self):
cdef H5G_stat_t stat
- H5Gget_objinfo(self.id, '.', 0, &stat)
- return (stat.fileno[0], stat.fileno[1])
+ with _phil:
+ H5Gget_objinfo(self.id, '.', 0, &stat)
+ return (stat.fileno[0], stat.fileno[1])
+
property valid:
def __get__(self):
- if not self.id:
+
+ # Locked objects are always valid, regardless of obj.id
+ if self.locked:
+ return True
+
+ # Former zombie object
+ if self.id == 0:
return False
- res = H5Iget_type(self.id) > 0
- if not res:
- self.id = 0
- return res
- def __cinit__(self, id):
- self.id = id
- self.locked = 0
- with registry.lock:
- registry[id] = self
+ # Ask HDF5. Note that H5Iis_valid only works for "user"
+ # identifiers, hence the above checks.
+ with _phil:
+ return H5Iis_valid(self.id)
+
+
+ def __cinit__(self, id_):
+ with _phil:
+ self.id = id_
+ self.locked = 0
+ IF DEBUG_ID:
+ print("CINIT - registering %d of kind %s HDF5 id %d" % (id(self), type(self), id_))
+ registry[id(self)] = weakref.ref(self)
+
def __dealloc__(self):
- if not self.locked:
+ with _phil:
+ IF DEBUG_ID:
+ print("DEALLOC - unregistering %d of kind %s HDF5 id %d" % (id(self), type(self), self.id))
+ try:
+ # There's no reason to expect it, but in principle H5Idec_ref
+ # could raise an exception.
+ if self.valid and (not self.locked):
+ H5Idec_ref(self.id)
+ finally:
+ del registry[id(self)]
+
+
+ def _close(self):
+ """ Manually close this object. """
+
+ with _phil:
+ IF DEBUG_ID:
+ print("CLOSE - %d of kind %s HDF5 id %d" % (id(self), type(self), self.id))
try:
- with registry.lock:
- del registry[self.id]
- except AttributeError:
- # library being torn down, registry is None
- pass
+ # There's no reason to expect it, but in principle H5Idec_ref
+ # could raise an exception.
+ if self.valid and (not self.locked):
+ H5Idec_ref(self.id)
+ finally:
+ self.id = 0
+
def __nonzero__(self):
return self.valid
+
def __copy__(self):
cdef ObjectID cpy
- cpy = type(self)(self.id)
- return cpy
+ with _phil:
+ cpy = type(self)(self.id)
+ H5Iinc_ref(cpy.id)
+ return cpy
+
def __richcmp__(self, object other, int how):
""" Default comparison mechanism for HDF5 objects (equal/not-equal)
@@ -270,21 +234,23 @@ cdef class ObjectID:
"""
cdef bint equal = 0
- if how != 2 and how != 3:
- return NotImplemented
+ with _phil:
+ if how != 2 and how != 3:
+ return NotImplemented
- if isinstance(other, ObjectID):
- if self.id == other.id:
- equal = 1
- else:
- try:
- equal = hash(self) == hash(other)
- except TypeError:
- pass
+ if isinstance(other, ObjectID):
+ if self.id == other.id:
+ equal = 1
+ else:
+ try:
+ equal = hash(self) == hash(other)
+ except TypeError:
+ pass
+
+ if how == 2:
+ return equal
+ return not equal
- if how == 2:
- return equal
- return not equal
def __hash__(self):
""" Default hashing mechanism for HDF5 objects
@@ -295,25 +261,16 @@ cdef class ObjectID:
3. If (1) fails, raise TypeError
"""
cdef H5G_stat_t stat
+
+ with _phil:
+ if self._hash is None:
+ try:
+ H5Gget_objinfo(self.id, '.', 0, &stat)
+ self._hash = hash((stat.fileno[0], stat.fileno[1], stat.objno[0], stat.objno[1]))
+ except Exception:
+ raise TypeError("Objects of class %s cannot be hashed" % self.__class__.__name__)
- if self._hash is None:
- try:
- H5Gget_objinfo(self.id, '.', 0, &stat)
- self._hash = hash((stat.fileno[0], stat.fileno[1], stat.objno[0], stat.objno[1]))
- except Exception:
- raise TypeError("Objects of class %s cannot be hashed" % self.__class__.__name__)
-
- return self._hash
-
- @classmethod
- def open(cls, id):
- """ Return a representation of an HDF5 identifier """
- with registry.lock:
- try:
- res = registry[id]
- except KeyError:
- res = cls(id)
- return res
+ return self._hash
cdef hid_t pdefault(ObjectID pid):
diff --git a/h5py/_proxy.c b/h5py/_proxy.c
deleted file mode 100644
index bbb6728..0000000
--- a/h5py/_proxy.c
+++ /dev/null
@@ -1,4484 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
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- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
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- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
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-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
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-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
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-#endif
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- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
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- #define PyString_CheckExact PyUnicode_CheckExact
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- #define PyBytesObject PyStringObject
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- #define PyBytes_CheckExact PyString_CheckExact
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- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
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- htri_t __pyx_v_need_bkg;
- hid_t __pyx_v_dstype;
- hid_t __pyx_v_rawdstype;
- hid_t __pyx_v_dspace;
- hid_t __pyx_v_cspace;
- void *__pyx_v_back_buf;
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- int __pyx_t_2;
- int __pyx_t_3;
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- herr_t __pyx_t_6;
- htri_t __pyx_t_7;
- htri_t __pyx_t_8;
- hssize_t __pyx_t_9;
- size_t __pyx_t_10;
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- * cdef hid_t rawdstype = -1
- * cdef hid_t dspace = -1 # Dataset dataspace
- */
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- /* "h5py/_proxy.pyx":107
- * cdef htri_t need_bkg
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- * cdef hid_t rawdstype = -1 # <<<<<<<<<<<<<<
- * cdef hid_t dspace = -1 # Dataset dataspace
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- */
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-
- /* "h5py/_proxy.pyx":108
- * cdef hid_t dstype = -1 # Dataset datatype
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- * cdef hid_t dspace = -1 # Dataset dataspace # <<<<<<<<<<<<<<
- * cdef hid_t cspace = -1 # Temporary contiguous dataspaces
- *
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- /* "h5py/_proxy.pyx":109
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- * cdef hid_t dspace = -1 # Dataset dataspace
- * cdef hid_t cspace = -1 # Temporary contiguous dataspaces # <<<<<<<<<<<<<<
- *
- * cdef void* back_buf = NULL
- */
- __pyx_v_cspace = -1;
-
- /* "h5py/_proxy.pyx":111
- * cdef hid_t cspace = -1 # Temporary contiguous dataspaces
- *
- * cdef void* back_buf = NULL # <<<<<<<<<<<<<<
- * cdef void* conv_buf = NULL
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- */
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- * cdef hsize_t npoints
- *
- */
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- */
- /*try:*/ {
-
- /* "h5py/_proxy.pyx":121
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- */
- __pyx_t_1 = __pyx_f_4h5py_4defs_H5Tget_class(__pyx_v_mtype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 121; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_2 = (__pyx_t_1 == H5T_COMPOUND);
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- /* "h5py/_proxy.pyx":122
- * # memory type directly because of course that triggers HDFFV-1063.
- * if (H5Tget_class(mtype) == H5T_COMPOUND) and (not read):
- * rawdstype = H5Dget_type(dset) # <<<<<<<<<<<<<<
- * dstype = make_reduced_type(mtype, rawdstype)
- * H5Tclose(rawdstype)
- */
- __pyx_t_5 = __pyx_f_4h5py_4defs_H5Dget_type(__pyx_v_dset); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 122; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_rawdstype = __pyx_t_5;
-
- /* "h5py/_proxy.pyx":123
- * if (H5Tget_class(mtype) == H5T_COMPOUND) and (not read):
- * rawdstype = H5Dget_type(dset)
- * dstype = make_reduced_type(mtype, rawdstype) # <<<<<<<<<<<<<<
- * H5Tclose(rawdstype)
- * else:
- */
- __pyx_v_dstype = __pyx_f_4h5py_6_proxy_make_reduced_type(__pyx_v_mtype, __pyx_v_rawdstype);
-
- /* "h5py/_proxy.pyx":124
- * rawdstype = H5Dget_type(dset)
- * dstype = make_reduced_type(mtype, rawdstype)
- * H5Tclose(rawdstype) # <<<<<<<<<<<<<<
- * else:
- * dstype = H5Dget_type(dset)
- */
- __pyx_t_6 = __pyx_f_4h5py_4defs_H5Tclose(__pyx_v_rawdstype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L4;}
- goto __pyx_L6;
- }
- /*else*/ {
-
- /* "h5py/_proxy.pyx":126
- * H5Tclose(rawdstype)
- * else:
- * dstype = H5Dget_type(dset) # <<<<<<<<<<<<<<
- *
- * if not (needs_proxy(dstype) or needs_proxy(mtype)):
- */
- __pyx_t_5 = __pyx_f_4h5py_4defs_H5Dget_type(__pyx_v_dset); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 126; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_dstype = __pyx_t_5;
- }
- __pyx_L6:;
-
- /* "h5py/_proxy.pyx":128
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- *
- * if not (needs_proxy(dstype) or needs_proxy(mtype)): # <<<<<<<<<<<<<<
- * if read:
- * H5PY_H5Dread(dset, mtype, mspace, fspace, dxpl, progbuf)
- */
- __pyx_t_7 = __pyx_f_4h5py_6_proxy_needs_proxy(__pyx_v_dstype); if (unlikely(__pyx_t_7 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 128; __pyx_clineno = __LINE__; goto __pyx_L4;}
- if (!__pyx_t_7) {
- __pyx_t_8 = __pyx_f_4h5py_6_proxy_needs_proxy(__pyx_v_mtype); if (unlikely(__pyx_t_8 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 128; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_4 = __pyx_t_8;
- } else {
- __pyx_t_4 = __pyx_t_7;
- }
- __pyx_t_2 = (!__pyx_t_4);
- if (__pyx_t_2) {
-
- /* "h5py/_proxy.pyx":129
- *
- * if not (needs_proxy(dstype) or needs_proxy(mtype)):
- * if read: # <<<<<<<<<<<<<<
- * H5PY_H5Dread(dset, mtype, mspace, fspace, dxpl, progbuf)
- * else:
- */
- if (__pyx_v_read) {
-
- /* "h5py/_proxy.pyx":130
- * if not (needs_proxy(dstype) or needs_proxy(mtype)):
- * if read:
- * H5PY_H5Dread(dset, mtype, mspace, fspace, dxpl, progbuf) # <<<<<<<<<<<<<<
- * else:
- * H5PY_H5Dwrite(dset, mtype, mspace, fspace, dxpl, progbuf)
- */
- __pyx_t_6 = __pyx_f_4h5py_6_proxy_H5PY_H5Dread(__pyx_v_dset, __pyx_v_mtype, __pyx_v_mspace, __pyx_v_fspace, __pyx_v_dxpl, __pyx_v_progbuf); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L4;}
- goto __pyx_L8;
- }
- /*else*/ {
-
- /* "h5py/_proxy.pyx":132
- * H5PY_H5Dread(dset, mtype, mspace, fspace, dxpl, progbuf)
- * else:
- * H5PY_H5Dwrite(dset, mtype, mspace, fspace, dxpl, progbuf) # <<<<<<<<<<<<<<
- * else:
- *
- */
- __pyx_t_6 = __pyx_f_4h5py_6_proxy_H5PY_H5Dwrite(__pyx_v_dset, __pyx_v_mtype, __pyx_v_mspace, __pyx_v_fspace, __pyx_v_dxpl, __pyx_v_progbuf); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 132; __pyx_clineno = __LINE__; goto __pyx_L4;}
- }
- __pyx_L8:;
- goto __pyx_L7;
- }
- /*else*/ {
-
- /* "h5py/_proxy.pyx":135
- * else:
- *
- * if mspace == H5S_ALL and fspace != H5S_ALL: # <<<<<<<<<<<<<<
- * mspace = fspace
- * elif mspace != H5S_ALL and fspace == H5S_ALL:
- */
- __pyx_t_2 = (__pyx_v_mspace == H5S_ALL);
- if (__pyx_t_2) {
- __pyx_t_4 = (__pyx_v_fspace != H5S_ALL);
- __pyx_t_3 = __pyx_t_4;
- } else {
- __pyx_t_3 = __pyx_t_2;
- }
- if (__pyx_t_3) {
-
- /* "h5py/_proxy.pyx":136
- *
- * if mspace == H5S_ALL and fspace != H5S_ALL:
- * mspace = fspace # <<<<<<<<<<<<<<
- * elif mspace != H5S_ALL and fspace == H5S_ALL:
- * fspace = mspace
- */
- __pyx_v_mspace = __pyx_v_fspace;
- goto __pyx_L9;
- }
-
- /* "h5py/_proxy.pyx":137
- * if mspace == H5S_ALL and fspace != H5S_ALL:
- * mspace = fspace
- * elif mspace != H5S_ALL and fspace == H5S_ALL: # <<<<<<<<<<<<<<
- * fspace = mspace
- * elif mspace == H5S_ALL and fspace == H5S_ALL:
- */
- __pyx_t_3 = (__pyx_v_mspace != H5S_ALL);
- if (__pyx_t_3) {
- __pyx_t_2 = (__pyx_v_fspace == H5S_ALL);
- __pyx_t_4 = __pyx_t_2;
- } else {
- __pyx_t_4 = __pyx_t_3;
- }
- if (__pyx_t_4) {
-
- /* "h5py/_proxy.pyx":138
- * mspace = fspace
- * elif mspace != H5S_ALL and fspace == H5S_ALL:
- * fspace = mspace # <<<<<<<<<<<<<<
- * elif mspace == H5S_ALL and fspace == H5S_ALL:
- * fspace = mspace = dspace = H5Dget_space(dset)
- */
- __pyx_v_fspace = __pyx_v_mspace;
- goto __pyx_L9;
- }
-
- /* "h5py/_proxy.pyx":139
- * elif mspace != H5S_ALL and fspace == H5S_ALL:
- * fspace = mspace
- * elif mspace == H5S_ALL and fspace == H5S_ALL: # <<<<<<<<<<<<<<
- * fspace = mspace = dspace = H5Dget_space(dset)
- *
- */
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- if (__pyx_t_4) {
- __pyx_t_3 = (__pyx_v_fspace == H5S_ALL);
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- } else {
- __pyx_t_2 = __pyx_t_4;
- }
- if (__pyx_t_2) {
-
- /* "h5py/_proxy.pyx":140
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- *
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- */
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- __pyx_v_fspace = __pyx_t_5;
- __pyx_v_mspace = __pyx_t_5;
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- goto __pyx_L9;
- }
- __pyx_L9:;
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- /* "h5py/_proxy.pyx":142
- * fspace = mspace = dspace = H5Dget_space(dset)
- *
- * npoints = H5Sget_select_npoints(mspace) # <<<<<<<<<<<<<<
- * cspace = H5Screate_simple(1, &npoints, NULL)
- *
- */
- __pyx_t_9 = __pyx_f_4h5py_4defs_H5Sget_select_npoints(__pyx_v_mspace); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_npoints = __pyx_t_9;
-
- /* "h5py/_proxy.pyx":143
- *
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- * cspace = H5Screate_simple(1, &npoints, NULL) # <<<<<<<<<<<<<<
- *
- * conv_buf = create_buffer(H5Tget_size(dstype), H5Tget_size(mtype), npoints)
- */
- __pyx_t_5 = __pyx_f_4h5py_4defs_H5Screate_simple(1, (&__pyx_v_npoints), NULL); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 143; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_cspace = __pyx_t_5;
-
- /* "h5py/_proxy.pyx":145
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- *
- * conv_buf = create_buffer(H5Tget_size(dstype), H5Tget_size(mtype), npoints) # <<<<<<<<<<<<<<
- *
- * # Only create a (contiguous) backing buffer if absolutely
- */
- __pyx_t_10 = __pyx_f_4h5py_4defs_H5Tget_size(__pyx_v_dstype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_11 = __pyx_f_4h5py_4defs_H5Tget_size(__pyx_v_mtype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_12 = __pyx_f_4h5py_6_proxy_create_buffer(__pyx_t_10, __pyx_t_11, __pyx_v_npoints); if (unlikely(__pyx_t_12 == NULL)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_conv_buf = __pyx_t_12;
-
- /* "h5py/_proxy.pyx":149
- * # Only create a (contiguous) backing buffer if absolutely
- * # necessary. Note this buffer always has memory type.
- * if read: # <<<<<<<<<<<<<<
- * need_bkg = needs_bkg_buffer(dstype, mtype)
- * else:
- */
- if (__pyx_v_read) {
-
- /* "h5py/_proxy.pyx":150
- * # necessary. Note this buffer always has memory type.
- * if read:
- * need_bkg = needs_bkg_buffer(dstype, mtype) # <<<<<<<<<<<<<<
- * else:
- * need_bkg = needs_bkg_buffer(mtype, dstype)
- */
- __pyx_t_7 = __pyx_f_4h5py_6_proxy_needs_bkg_buffer(__pyx_v_dstype, __pyx_v_mtype); if (unlikely(__pyx_t_7 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 150; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_need_bkg = __pyx_t_7;
- goto __pyx_L10;
- }
- /*else*/ {
-
- /* "h5py/_proxy.pyx":152
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- * else:
- * need_bkg = needs_bkg_buffer(mtype, dstype) # <<<<<<<<<<<<<<
- * if need_bkg:
- * back_buf = create_buffer(H5Tget_size(dstype), H5Tget_size(mtype), npoints)
- */
- __pyx_t_7 = __pyx_f_4h5py_6_proxy_needs_bkg_buffer(__pyx_v_mtype, __pyx_v_dstype); if (unlikely(__pyx_t_7 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 152; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_need_bkg = __pyx_t_7;
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- __pyx_L10:;
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- /* "h5py/_proxy.pyx":153
- * else:
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- * if need_bkg: # <<<<<<<<<<<<<<
- * back_buf = create_buffer(H5Tget_size(dstype), H5Tget_size(mtype), npoints)
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- */
- if (__pyx_v_need_bkg) {
-
- /* "h5py/_proxy.pyx":154
- * need_bkg = needs_bkg_buffer(mtype, dstype)
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- *
- */
- __pyx_t_11 = __pyx_f_4h5py_4defs_H5Tget_size(__pyx_v_dstype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 154; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_10 = __pyx_f_4h5py_4defs_H5Tget_size(__pyx_v_mtype); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 154; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_t_12 = __pyx_f_4h5py_6_proxy_create_buffer(__pyx_t_11, __pyx_t_10, __pyx_v_npoints); if (unlikely(__pyx_t_12 == NULL)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 154; __pyx_clineno = __LINE__; goto __pyx_L4;}
- __pyx_v_back_buf = __pyx_t_12;
-
- /* "h5py/_proxy.pyx":155
- * if need_bkg:
- * back_buf = create_buffer(H5Tget_size(dstype), H5Tget_size(mtype), npoints)
- * h5py_copy(mtype, mspace, back_buf, progbuf, H5PY_GATHER) # <<<<<<<<<<<<<<
- *
- * if read:
- */
- __pyx_t_6 = __pyx_f_4h5py_6_proxy_h5py_copy(__pyx_v_mtype, __pyx_v_mspace, __pyx_v_back_buf, __pyx_v_progbuf, __pyx_e_4h5py_6_proxy_H5PY_GATHER); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L4;}
- goto __pyx_L11;
- }
- __pyx_L11:;
-
- /* "h5py/_proxy.pyx":157
- * h5py_copy(mtype, mspace, back_buf, progbuf, H5PY_GATHER)
- *
- * if read: # <<<<<<<<<<<<<<
- * H5PY_H5Dread(dset, dstype, cspace, fspace, dxpl, conv_buf)
- * H5Tconvert(dstype, mtype, npoints, conv_buf, back_buf, dxpl)
- */
- if (__pyx_v_read) {
-
- /* "h5py/_proxy.pyx":158
- *
- * if read:
- * H5PY_H5Dread(dset, dstype, cspace, fspace, dxpl, conv_buf) # <<<<<<<<<<<<<<
- * H5Tconvert(dstype, mtype, npoints, conv_buf, back_buf, dxpl)
- * h5py_copy(mtype, mspace, conv_buf, progbuf, H5PY_SCATTER)
- */
- __pyx_t_6 = __pyx_f_4h5py_6_proxy_H5PY_H5Dread(__pyx_v_dset, __pyx_v_dstype, __pyx_v_cspace, __pyx_v_fspace, __pyx_v_dxpl, __pyx_v_conv_buf); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 158; __pyx_clineno = __LINE__; goto __pyx_L4;}
-
- /* "h5py/_proxy.pyx":159
- * if read:
- * H5PY_H5Dread(dset, dstype, cspace, fspace, dxpl, conv_buf)
- * H5Tconvert(dstype, mtype, npoints, conv_buf, back_buf, dxpl) # <<<<<<<<<<<<<<
- * h5py_copy(mtype, mspace, conv_buf, progbuf, H5PY_SCATTER)
- * else:
- */
- __pyx_t_6 = __pyx_f_4h5py_4defs_H5Tconvert(__pyx_v_dstype, __pyx_v_mtype, __pyx_v_npoints, __pyx_v_conv_buf, __pyx_v_back_buf, __pyx_v_dxpl); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 159; __pyx_clineno = __LINE__; goto __pyx_L4;}
-
- /* "h5py/_proxy.pyx":160
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- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION < 3
-static PyObject *__Pyx_GetStdout(void) {
- PyObject *f = PySys_GetObject((char *)"stdout");
- if (!f) {
- PyErr_SetString(PyExc_RuntimeError, "lost sys.stdout");
- }
- return f;
-}
-static int __Pyx_Print(PyObject* f, PyObject *arg_tuple, int newline) {
- int i;
- if (!f) {
- if (!(f = __Pyx_GetStdout()))
- return -1;
- }
- Py_INCREF(f);
- for (i=0; i < PyTuple_GET_SIZE(arg_tuple); i++) {
- PyObject* v;
- if (PyFile_SoftSpace(f, 1)) {
- if (PyFile_WriteString(" ", f) < 0)
- goto error;
- }
- v = PyTuple_GET_ITEM(arg_tuple, i);
- if (PyFile_WriteObject(v, f, Py_PRINT_RAW) < 0)
- goto error;
- if (PyString_Check(v)) {
- char *s = PyString_AsString(v);
- Py_ssize_t len = PyString_Size(v);
- if (len > 0 &&
- isspace(Py_CHARMASK(s[len-1])) &&
- s[len-1] != ' ')
- PyFile_SoftSpace(f, 0);
- }
- }
- if (newline) {
- if (PyFile_WriteString("\n", f) < 0)
- goto error;
- PyFile_SoftSpace(f, 0);
- }
- Py_DECREF(f);
- return 0;
-error:
- Py_DECREF(f);
- return -1;
-}
-#else /* Python 3 has a print function */
-static int __Pyx_Print(PyObject* stream, PyObject *arg_tuple, int newline) {
- PyObject* kwargs = 0;
- PyObject* result = 0;
- PyObject* end_string;
- if (unlikely(!__pyx_print)) {
- __pyx_print = __Pyx_GetAttrString(__pyx_b, "print");
- if (!__pyx_print)
- return -1;
- }
- if (stream) {
- kwargs = PyDict_New();
- if (unlikely(!kwargs))
- return -1;
- if (unlikely(PyDict_SetItemString(kwargs, "file", stream) < 0))
- goto bad;
- if (!newline) {
- end_string = PyUnicode_FromStringAndSize(" ", 1);
- if (unlikely(!end_string))
- goto bad;
- if (PyDict_SetItemString(kwargs, "end", end_string) < 0) {
- Py_DECREF(end_string);
- goto bad;
- }
- Py_DECREF(end_string);
- }
- } else if (!newline) {
- if (unlikely(!__pyx_print_kwargs)) {
- __pyx_print_kwargs = PyDict_New();
- if (unlikely(!__pyx_print_kwargs))
- return -1;
- end_string = PyUnicode_FromStringAndSize(" ", 1);
- if (unlikely(!end_string))
- return -1;
- if (PyDict_SetItemString(__pyx_print_kwargs, "end", end_string) < 0) {
- Py_DECREF(end_string);
- return -1;
- }
- Py_DECREF(end_string);
- }
- kwargs = __pyx_print_kwargs;
- }
- result = PyObject_Call(__pyx_print, arg_tuple, kwargs);
- if (unlikely(kwargs) && (kwargs != __pyx_print_kwargs))
- Py_DECREF(kwargs);
- if (!result)
- return -1;
- Py_DECREF(result);
- return 0;
-bad:
- if (kwargs != __pyx_print_kwargs)
- Py_XDECREF(kwargs);
- return -1;
-}
-#endif
-
-#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION < 3
-static int __Pyx_PrintOne(PyObject* f, PyObject *o) {
- if (!f) {
- if (!(f = __Pyx_GetStdout()))
- return -1;
- }
- Py_INCREF(f);
- if (PyFile_SoftSpace(f, 0)) {
- if (PyFile_WriteString(" ", f) < 0)
- goto error;
- }
- if (PyFile_WriteObject(o, f, Py_PRINT_RAW) < 0)
- goto error;
- if (PyFile_WriteString("\n", f) < 0)
- goto error;
- Py_DECREF(f);
- return 0;
-error:
- Py_DECREF(f);
- return -1;
- /* the line below is just to avoid C compiler
- * warnings about unused functions */
- return __Pyx_Print(f, NULL, 0);
-}
-#else /* Python 3 has a print function */
-static int __Pyx_PrintOne(PyObject* stream, PyObject *o) {
- int res;
- PyObject* arg_tuple = PyTuple_Pack(1, o);
- if (unlikely(!arg_tuple))
- return -1;
- res = __Pyx_Print(stream, arg_tuple, 1);
- Py_DECREF(arg_tuple);
- return res;
-}
-#endif
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno,
- CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename) {
- PyObject *old_exc, *old_val, *old_tb;
- PyObject *ctx;
- __Pyx_ErrFetch(&old_exc, &old_val, &old_tb);
- #if PY_MAJOR_VERSION < 3
- ctx = PyString_FromString(name);
- #else
- ctx = PyUnicode_FromString(name);
- #endif
- __Pyx_ErrRestore(old_exc, old_val, old_tb);
- if (!ctx) {
- PyErr_WriteUnraisable(Py_None);
- } else {
- PyErr_WriteUnraisable(ctx);
- Py_DECREF(ctx);
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/_proxy.pyx b/h5py/_proxy.pyx
index 0576d47..63a9670 100644
--- a/h5py/_proxy.pyx
+++ b/h5py/_proxy.pyx
@@ -184,35 +184,49 @@ cdef hid_t make_reduced_type(hid_t mtype, hid_t dstype):
cdef hid_t newtype, temptype
cdef hsize_t newtype_size, offset
+ cdef char* member_name = NULL
# Make a list of all names in the memory type.
mtype_fields = []
for idx in xrange(H5Tget_nmembers(mtype)):
- mtype_fields.append(H5Tget_member_name(mtype, idx))
+ member_name = H5Tget_member_name(mtype, idx)
+ try:
+ mtype_fields.append(member_name)
+ finally:
+ free(member_name)
+ member_name = NULL
# First pass: add up the sizes of matching fields so we know how large a
# type to make
newtype_size = 0
for idx in xrange(H5Tget_nmembers(dstype)):
- name = H5Tget_member_name(dstype, idx)
- if name not in mtype_fields:
- continue
- temptype = H5Tget_member_type(dstype, idx)
- newtype_size += H5Tget_size(temptype)
- H5Tclose(temptype)
+ member_name = H5Tget_member_name(dstype, idx)
+ try:
+ if member_name not in mtype_fields:
+ continue
+ temptype = H5Tget_member_type(dstype, idx)
+ newtype_size += H5Tget_size(temptype)
+ H5Tclose(temptype)
+ finally:
+ free(member_name)
+ member_name = NULL
newtype = H5Tcreate(H5T_COMPOUND, newtype_size)
# Second pass: pick out the matching fields and pack them in the new type
offset = 0
for idx in xrange(H5Tget_nmembers(dstype)):
- name = H5Tget_member_name(dstype, idx)
- if name not in mtype_fields:
- continue
- temptype = H5Tget_member_type(dstype, idx)
- H5Tinsert(newtype, name, offset, temptype)
- offset += H5Tget_size(temptype)
- H5Tclose(temptype)
+ member_name = H5Tget_member_name(dstype, idx)
+ try:
+ if member_name not in mtype_fields:
+ continue
+ temptype = H5Tget_member_type(dstype, idx)
+ H5Tinsert(newtype, member_name, offset, temptype)
+ offset += H5Tget_size(temptype)
+ H5Tclose(temptype)
+ finally:
+ free(member_name)
+ member_name = NULL
return newtype
diff --git a/h5py/api_compat.h b/h5py/api_compat.h
index 7118f49..96a2da7 100644
--- a/h5py/api_compat.h
+++ b/h5py/api_compat.h
@@ -16,6 +16,11 @@
#ifndef H5PY_COMPAT
#define H5PY_COMPAT
+#if defined(MPI_VERSION) && (MPI_VERSION < 3) && !defined(PyMPI_HAVE_MPI_Message)
+typedef void *PyMPI_MPI_Message;
+#define MPI_Message PyMPI_MPI_Message
+#endif
+
#include <stddef.h>
#include "Python.h"
#include "numpy/arrayobject.h"
diff --git a/h5py/api_functions.txt b/h5py/api_functions.txt
index ed27a7f..ea5e707 100644
--- a/h5py/api_functions.txt
+++ b/h5py/api_functions.txt
@@ -7,28 +7,94 @@
# License: Standard 3-clause BSD; see "license.txt" for full license terms
# and contributor agreement.
+
+# Defines the HDF5 C API functions wrapped by h5py. See also api_gen.py.
+#
+# Format of this file:
+#
+# header_declaration:
+# function_line
+# function_line
+# ...
+#
+# Header declarations are the basenames of the C header files (without the .h);
+# for example, functions from "hdf5.h" are under the "hdf5" declaration.
+#
+# Function lines are C function signatures, optionally preceeded by:
+# MPI If present, function requires an MPI-aware build of h5py
+# ERROR Explicit error checks are needed (HDF5 does not use error stack)
+# X.Y.Z Minimum version of HDF5 required for this function
+#
+# Blank/whitespace-only lines are ignored, as are lines whose first
+# non-whitespace character is "#". Indentation must be via spaces only.
+
+
hdf5:
- herr_t H5open()
- herr_t H5close()
- herr_t H5get_libversion(unsigned *majnum, unsigned *minnum, unsigned *relnum)
+ # === H5 - General library functions ========================================
+
+ herr_t H5open()
+ herr_t H5close()
+ herr_t H5get_libversion(unsigned *majnum, unsigned *minnum, unsigned *relnum)
+
- hid_t H5Dcreate2(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id)
- hid_t H5Dcreate_anon(hid_t file_id, hid_t type_id, hid_t space_id, hid_t plist_id, hid_t dapl_id)
+ # === H5A - Attributes API ==================================================
+
+ hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist)
+ hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx)
+ hid_t H5Aopen_name(hid_t loc_id, char *name)
+ herr_t H5Aclose(hid_t attr_id)
+ herr_t H5Adelete(hid_t loc_id, char *name)
+
+ herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf)
+ herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf )
+
+ int H5Aget_num_attrs(hid_t loc_id)
+ ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf)
+ hid_t H5Aget_space(hid_t attr_id)
+ hid_t H5Aget_type(hid_t attr_id)
+ herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data)
+
+ herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id)
+ herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
+
+ hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id)
+
+ herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id)
+ herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id)
+ herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id)
+ htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id)
+ htri_t H5Aexists(hid_t obj_id, char *attr_name)
+
+ herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name)
+ herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id)
+
+ herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo)
+ herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id)
+ herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id)
+
+ herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data)
+ hsize_t H5Aget_storage_size(hid_t attr_id)
+
+
+ # === H5D - Dataset API =====================================================
+
+ hid_t H5Dcreate2(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id)
+ hid_t H5Dcreate_anon(hid_t file_id, hid_t type_id, hid_t space_id, hid_t plist_id, hid_t dapl_id)
hid_t H5Dopen(hid_t file_id, char *name)
+ hid_t H5Dopen2(hid_t loc_id, char *name, hid_t dapl_id )
herr_t H5Dclose(hid_t dset_id)
hid_t H5Dget_space(hid_t dset_id)
herr_t H5Dget_space_status(hid_t dset_id, H5D_space_status_t *status)
hid_t H5Dget_type(hid_t dset_id)
hid_t H5Dget_create_plist(hid_t dataset_id)
+ hid_t H5Dget_access_plist(hid_t dataset_id)
haddr_t H5Dget_offset(hid_t dset_id)
hsize_t H5Dget_storage_size(hid_t dset_id)
- # These must have their return values checked manually, in order to
- # allow the GIL to be released during reading and writing.
herr_t H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t plist_id, void *buf)
herr_t H5Dwrite(hid_t dset_id, hid_t mem_type, hid_t mem_space, hid_t file_space, hid_t xfer_plist, void* buf)
@@ -42,15 +108,13 @@ hdf5:
herr_t H5Dset_extent(hid_t dset_id, hsize_t* size)
+ # === H5F - File API ========================================================
-# === H5F - File API ==========================================================
-
-
- hid_t H5Fcreate(char *filename, unsigned int flags, hid_t create_plist, hid_t access_plist)
- hid_t H5Fopen(char *name, unsigned flags, hid_t access_id)
- herr_t H5Fclose (hid_t file_id)
- htri_t H5Fis_hdf5(char *name)
- herr_t H5Fflush(hid_t object_id, H5F_scope_t scope)
+ hid_t H5Fcreate(char *filename, unsigned int flags, hid_t create_plist, hid_t access_plist)
+ hid_t H5Fopen(char *name, unsigned flags, hid_t access_id)
+ herr_t H5Fclose (hid_t file_id)
+ htri_t H5Fis_hdf5(char *name)
+ herr_t H5Fflush(hid_t object_id, H5F_scope_t scope)
hid_t H5Freopen(hid_t file_id)
herr_t H5Fmount(hid_t loc_id, char *name, hid_t child_id, hid_t plist_id)
@@ -64,52 +128,47 @@ hdf5:
int H5Fget_obj_ids(hid_t file_id, unsigned int types, int max_objs, hid_t *obj_id_list)
herr_t H5Fget_vfd_handle(hid_t file_id, hid_t fapl_id, void **file_handle)
+ herr_t H5Fget_intent(hid_t file_id, unsigned int *intent)
+ herr_t H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
+ herr_t H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr)
+ herr_t H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, size_t *cur_size_ptr, int *cur_num_entries_ptr)
+ herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id)
+ herr_t H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
- herr_t H5Fget_intent(hid_t file_id, unsigned int *intent)
-
- herr_t H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
- herr_t H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr)
- herr_t H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, size_t *cur_size_ptr, int *cur_num_entries_ptr)
- herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id)
- herr_t H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
-# === H5FD - Low-level file descriptor API ====================================
-
-# === H5G - Groups API ========================================================
-
-
-
- hid_t H5Gcreate(hid_t loc_id, char *name, size_t size_hint)
- hid_t H5Gopen(hid_t loc_id, char *name)
- herr_t H5Gclose(hid_t group_id)
- herr_t H5Glink2( hid_t curr_loc_id, char *current_name, H5G_link_t link_type, hid_t new_loc_id, char *new_name)
-
- herr_t H5Gunlink (hid_t file_id, char *name)
- herr_t H5Gmove2(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name)
- herr_t H5Gget_num_objs(hid_t loc_id, hsize_t* num_obj)
- int H5Gget_objname_by_idx(hid_t loc_id, hsize_t idx, char *name, size_t size)
- int H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx)
+ # MPI functions
+ MPI 1.8.9 herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag)
+ MPI 1.8.9 herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag)
- herr_t H5Giterate(hid_t loc_id, char *name, int *idx, H5G_iterate_t op, void* data)
- herr_t H5Gget_objinfo(hid_t loc_id, char* name, int follow_link, H5G_stat_t *statbuf)
- herr_t H5Gget_linkval(hid_t loc_id, char *name, size_t size, char *value)
- herr_t H5Gset_comment(hid_t loc_id, char *name, char *comment)
- int H5Gget_comment(hid_t loc_id, char *name, size_t bufsize, char *comment)
+ # === H5G - Groups API ======================================================
- # New extensions in 1.8.X
+ hid_t H5Gcreate(hid_t loc_id, char *name, size_t size_hint)
+ hid_t H5Gopen(hid_t loc_id, char *name)
+ herr_t H5Gclose(hid_t group_id)
+ herr_t H5Glink2( hid_t curr_loc_id, char *current_name, H5G_link_t link_type, hid_t new_loc_id, char *new_name)
+ herr_t H5Gunlink (hid_t file_id, char *name)
+ herr_t H5Gmove2(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name)
+ herr_t H5Gget_num_objs(hid_t loc_id, hsize_t* num_obj)
+ int H5Gget_objname_by_idx(hid_t loc_id, hsize_t idx, char *name, size_t size)
+ int H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx)
- hid_t H5Gcreate_anon( hid_t loc_id, hid_t gcpl_id, hid_t gapl_id)
- hid_t H5Gcreate2(hid_t loc_id, char *name, hid_t lcpl_id, hid_t gcpl_id, hid_t gapl_id)
- hid_t H5Gopen2( hid_t loc_id, char * name, hid_t gapl_id)
- herr_t H5Gget_info( hid_t group_id, H5G_info_t *group_info)
- herr_t H5Gget_info_by_name( hid_t loc_id, char *group_name, H5G_info_t *group_info, hid_t lapl_id)
- hid_t H5Gget_create_plist(hid_t group_id)
+ herr_t H5Giterate(hid_t loc_id, char *name, int *idx, H5G_iterate_t op, void* data)
+ herr_t H5Gget_objinfo(hid_t loc_id, char* name, int follow_link, H5G_stat_t *statbuf)
+ herr_t H5Gget_linkval(hid_t loc_id, char *name, size_t size, char *value)
+ herr_t H5Gset_comment(hid_t loc_id, char *name, char *comment)
+ int H5Gget_comment(hid_t loc_id, char *name, size_t bufsize, char *comment)
-# === H5I - Identifier and reflection interface ===============================
+ hid_t H5Gcreate_anon( hid_t loc_id, hid_t gcpl_id, hid_t gapl_id)
+ hid_t H5Gcreate2(hid_t loc_id, char *name, hid_t lcpl_id, hid_t gcpl_id, hid_t gapl_id)
+ hid_t H5Gopen2( hid_t loc_id, char * name, hid_t gapl_id)
+ herr_t H5Gget_info( hid_t group_id, H5G_info_t *group_info)
+ herr_t H5Gget_info_by_name( hid_t loc_id, char *group_name, H5G_info_t *group_info, hid_t lapl_id)
+ hid_t H5Gget_create_plist(hid_t group_id)
+ # === H5I - Identifier and reflection interface =============================
H5I_type_t H5Iget_type(hid_t obj_id)
ssize_t H5Iget_name( hid_t obj_id, char *name, size_t size)
@@ -117,108 +176,81 @@ hdf5:
int H5Idec_ref(hid_t obj_id)
int H5Iget_ref(hid_t obj_id)
int H5Iinc_ref(hid_t obj_id)
+ htri_t H5Iis_valid( hid_t obj_id )
-# === H5L - Links interface (1.8.X only) ======================================
-
-
-
-
-
- # Links API
-
- herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
-
- herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
-
- herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
-
- herr_t H5Lcreate_soft(char *link_target, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id)
-
- herr_t H5Ldelete(hid_t loc_id, char *name, hid_t lapl_id)
-
- herr_t H5Ldelete_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
-
- herr_t H5Lget_val(hid_t loc_id, char *name, void *bufout, size_t size, hid_t lapl_id)
-
- herr_t H5Lget_val_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, void *bufout, size_t size, hid_t lapl_id)
-
- htri_t H5Lexists(hid_t loc_id, char *name, hid_t lapl_id)
-
- herr_t H5Lget_info(hid_t loc_id, char *name, H5L_info_t *linfo, hid_t lapl_id)
-
- herr_t H5Lget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5L_info_t *linfo, hid_t lapl_id)
-
- ssize_t H5Lget_name_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, char *name, size_t size, hid_t lapl_id)
-
- herr_t H5Literate(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data)
-
- herr_t H5Literate_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data, hid_t lapl_id)
-
- herr_t H5Lvisit(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data)
-
- herr_t H5Lvisit_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data, hid_t lapl_id)
-
- herr_t H5Lunpack_elink_val(void *ext_linkval, size_t link_size, unsigned *flags, char **filename, char **obj_path)
-
- herr_t H5Lcreate_external(char *file_name, char *obj_name, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id)
-
-# === H5O - General object operations (1.8.X only) ============================
-
-
-
+ # === H5L - Links interface =================================================
+ herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
+ herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
+ herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id)
+ herr_t H5Lcreate_soft(char *link_target, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id)
+ herr_t H5Ldelete(hid_t loc_id, char *name, hid_t lapl_id)
+ herr_t H5Ldelete_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
+ herr_t H5Lget_val(hid_t loc_id, char *name, void *bufout, size_t size, hid_t lapl_id)
+ herr_t H5Lget_val_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, void *bufout, size_t size, hid_t lapl_id)
+ htri_t H5Lexists(hid_t loc_id, char *name, hid_t lapl_id)
+ herr_t H5Lget_info(hid_t loc_id, char *name, H5L_info_t *linfo, hid_t lapl_id)
+ herr_t H5Lget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5L_info_t *linfo, hid_t lapl_id)
+ ssize_t H5Lget_name_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, char *name, size_t size, hid_t lapl_id)
+ herr_t H5Literate(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data)
+ herr_t H5Literate_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data, hid_t lapl_id)
+ herr_t H5Lvisit(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data)
+ herr_t H5Lvisit_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data, hid_t lapl_id)
+ herr_t H5Lunpack_elink_val(void *ext_linkval, size_t link_size, unsigned *flags, char **filename, char **obj_path)
+ herr_t H5Lcreate_external(char *file_name, char *obj_name, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id)
- # --- H5O API -------------------------------------------------------------
- hid_t H5Oopen(hid_t loc_id, char *name, hid_t lapl_id)
- hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr)
- hid_t H5Oopen_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
+ # === H5O - General object operations =======================================
- herr_t H5Oget_info(hid_t loc_id, H5O_info_t *oinfo)
- herr_t H5Oget_info_by_name(hid_t loc_id, char *name, H5O_info_t *oinfo, hid_t lapl_id)
- herr_t H5Oget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5O_info_t *oinfo, hid_t lapl_id)
+ hid_t H5Oopen(hid_t loc_id, char *name, hid_t lapl_id)
+ hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr)
+ hid_t H5Oopen_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
- herr_t H5Olink(hid_t obj_id, hid_t new_loc_id, char *new_name, hid_t lcpl_id, hid_t lapl_id)
- herr_t H5Ocopy(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name, hid_t ocpypl_id, hid_t lcpl_id)
+ herr_t H5Oget_info(hid_t loc_id, H5O_info_t *oinfo)
+ herr_t H5Oget_info_by_name(hid_t loc_id, char *name, H5O_info_t *oinfo, hid_t lapl_id)
+ herr_t H5Oget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5O_info_t *oinfo, hid_t lapl_id)
- herr_t H5Oincr_refcount(hid_t object_id)
- herr_t H5Odecr_refcount(hid_t object_id)
+ herr_t H5Olink(hid_t obj_id, hid_t new_loc_id, char *new_name, hid_t lcpl_id, hid_t lapl_id)
+ herr_t H5Ocopy(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name, hid_t ocpypl_id, hid_t lcpl_id)
- herr_t H5Oset_comment(hid_t obj_id, char *comment)
- herr_t H5Oset_comment_by_name(hid_t loc_id, char *name, char *comment, hid_t lapl_id)
- ssize_t H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize)
- ssize_t H5Oget_comment_by_name(hid_t loc_id, char *name, char *comment, size_t bufsize, hid_t lapl_id)
+ herr_t H5Oincr_refcount(hid_t object_id)
+ herr_t H5Odecr_refcount(hid_t object_id)
- herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data)
- herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id)
+ herr_t H5Oset_comment(hid_t obj_id, char *comment)
+ herr_t H5Oset_comment_by_name(hid_t loc_id, char *name, char *comment, hid_t lapl_id)
+ ssize_t H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize)
+ ssize_t H5Oget_comment_by_name(hid_t loc_id, char *name, char *comment, size_t bufsize, hid_t lapl_id)
- herr_t H5Oclose(hid_t object_id)
-
-# === H5P - Property list API =================================================
+ herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data)
+ herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id)
+ herr_t H5Oclose(hid_t object_id)
+ # Version-limited functions
+ 1.8.5 htri_t H5Oexists_by_name(hid_t loc_id, char * name, hid_t lapl_id )
+ # === H5P - Property list API ===============================================
# General operations
- hid_t H5Pcreate(hid_t plist_id)
- hid_t H5Pcopy(hid_t plist_id)
- int H5Pget_class(hid_t plist_id)
- herr_t H5Pclose(hid_t plist_id)
- htri_t H5Pequal( hid_t id1, hid_t id2 )
- herr_t H5Pclose_class(hid_t id)
-
- # File creation properties
- herr_t H5Pget_version(hid_t plist, unsigned int *super_, unsigned int* freelist, unsigned int *stab, unsigned int *shhdr)
- herr_t H5Pset_userblock(hid_t plist, hsize_t size)
- herr_t H5Pget_userblock(hid_t plist, hsize_t * size)
- herr_t H5Pset_sizes(hid_t plist, size_t sizeof_addr, size_t sizeof_size)
- herr_t H5Pget_sizes(hid_t plist, size_t *sizeof_addr, size_t *sizeof_size)
- herr_t H5Pset_sym_k(hid_t plist, unsigned int ik, unsigned int lk)
- herr_t H5Pget_sym_k(hid_t plist, unsigned int *ik, unsigned int *lk)
- herr_t H5Pset_istore_k(hid_t plist, unsigned int ik)
- herr_t H5Pget_istore_k(hid_t plist, unsigned int *ik)
+ hid_t H5Pcreate(hid_t plist_id)
+ hid_t H5Pcopy(hid_t plist_id)
+ int H5Pget_class(hid_t plist_id)
+ herr_t H5Pclose(hid_t plist_id)
+ htri_t H5Pequal( hid_t id1, hid_t id2 )
+ herr_t H5Pclose_class(hid_t id)
+
+ # File creation
+ herr_t H5Pget_version(hid_t plist, unsigned int *super_, unsigned int* freelist, unsigned int *stab, unsigned int *shhdr)
+ herr_t H5Pset_userblock(hid_t plist, hsize_t size)
+ herr_t H5Pget_userblock(hid_t plist, hsize_t * size)
+ herr_t H5Pset_sizes(hid_t plist, size_t sizeof_addr, size_t sizeof_size)
+ herr_t H5Pget_sizes(hid_t plist, size_t *sizeof_addr, size_t *sizeof_size)
+ herr_t H5Pset_sym_k(hid_t plist, unsigned int ik, unsigned int lk)
+ herr_t H5Pget_sym_k(hid_t plist, unsigned int *ik, unsigned int *lk)
+ herr_t H5Pset_istore_k(hid_t plist, unsigned int ik)
+ herr_t H5Pget_istore_k(hid_t plist, unsigned int *ik)
# File access
herr_t H5Pset_fclose_degree(hid_t fapl_id, H5F_close_degree_t fc_degree)
@@ -231,18 +263,15 @@ hdf5:
herr_t H5Pget_family_offset ( hid_t fapl_id, hsize_t *offset)
herr_t H5Pset_fapl_log(hid_t fapl_id, char *logfile, unsigned int flags, size_t buf_size)
herr_t H5Pset_fapl_multi(hid_t fapl_id, H5FD_mem_t *memb_map, hid_t *memb_fapl, char **memb_name, haddr_t *memb_addr, hbool_t relax)
- herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, int rdcc_nelmts, size_t rdcc_nbytes, double rdcc_w0)
- herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, int *rdcc_nelmts, size_t *rdcc_nbytes, double *rdcc_w0)
- herr_t H5Pset_fapl_sec2(hid_t fapl_id)
- herr_t H5Pset_fapl_stdio(hid_t fapl_id)
- hid_t H5Pget_driver(hid_t fapl_id)
-
-
- herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr)
- herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr)
-
-
- # Dataset creation properties
+ herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, int rdcc_nelmts, size_t rdcc_nbytes, double rdcc_w0)
+ herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, int *rdcc_nelmts, size_t *rdcc_nbytes, double *rdcc_w0)
+ herr_t H5Pset_fapl_sec2(hid_t fapl_id)
+ herr_t H5Pset_fapl_stdio(hid_t fapl_id)
+ hid_t H5Pget_driver(hid_t fapl_id)
+ herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr)
+ herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr)
+
+ # Dataset creation
herr_t H5Pset_layout(hid_t plist, int layout)
H5D_layout_t H5Pget_layout(hid_t plist)
herr_t H5Pset_chunk(hid_t plist, int ndims, hsize_t * dim)
@@ -267,68 +296,64 @@ hdf5:
herr_t H5Pset_szip(hid_t plist, unsigned int options_mask, unsigned int pixels_per_block)
herr_t H5Pset_scaleoffset(hid_t plist, H5Z_SO_scale_type_t scale_type, int scale_factor)
- # Dataset Acces, Memory, and Tranfer Properties
+ # Dataset access
herr_t H5Pset_edc_check(hid_t plist, H5Z_EDC_t check)
H5Z_EDC_t H5Pget_edc_check(hid_t plist)
herr_t H5Pset_chunk_cache( hid_t dapl_id, size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0 )
herr_t H5Pget_chunk_cache( hid_t dapl_id, size_t *rdcc_nslots, size_t *rdcc_nbytes, double *rdcc_w0 )
# Other properties
- herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size)
- herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size)
-
- # New in 1.8
-
-
- herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks)
- herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks)
- herr_t H5Pset_elink_prefix(hid_t plist_id, char *prefix)
- ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size)
- hid_t H5Pget_elink_fapl(hid_t lapl_id)
- herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id)
-
- herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd)
- herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd)
+ herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size)
+ herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size)
- herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd)
- herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd)
+ herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks)
+ herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks)
+ herr_t H5Pset_elink_prefix(hid_t plist_id, char *prefix)
+ ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size)
+ hid_t H5Pget_elink_fapl(hid_t lapl_id)
+ herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id)
- herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding)
- herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding)
+ herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd)
+ herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd)
- herr_t H5Pset_obj_track_times( hid_t ocpl_id, hbool_t track_times )
- herr_t H5Pget_obj_track_times( hid_t ocpl_id, hbool_t *track_times )
+ herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd)
+ herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd)
- herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint)
- herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint)
- herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense)
- herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact , unsigned *min_dense)
- herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len)
- herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries , unsigned *est_name_len)
- herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags)
- herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags)
+ herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding)
+ herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding)
- herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high)
- herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high)
+ herr_t H5Pset_obj_track_times( hid_t ocpl_id, hbool_t track_times )
+ herr_t H5Pget_obj_track_times( hid_t ocpl_id, hbool_t *track_times )
+ herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint)
+ herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint)
+ herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense)
+ herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact , unsigned *min_dense)
+ herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len)
+ herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries , unsigned *est_name_len)
+ herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags)
+ herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags)
+ herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high)
+ herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high)
+ herr_t H5Pset_alignment(hid_t plist_id, hsize_t threshold, hsize_t alignment)
+ herr_t H5Pget_alignment(hid_t plist_id, hsize_t *threshold, hsize_t *alignment)
-# === H5R - Reference API =====================================================
-
+ # MPI functions
+ MPI herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info)
+ MPI herr_t H5Pget_fapl_mpio(hid_t fapl_id, MPI_Comm *comm, MPI_Info *info)
+ # === H5R - Reference API ===================================================
herr_t H5Rcreate(void *ref, hid_t loc_id, char *name, H5R_type_t ref_type, hid_t space_id)
hid_t H5Rdereference(hid_t obj_id, H5R_type_t ref_type, void *ref)
hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, void *ref)
H5G_obj_t H5Rget_obj_type(hid_t id, H5R_type_t ref_type, void *ref)
+ ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, void *ref, char *name, size_t size)
- ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, void *ref, char *name, size_t size)
-
-# === H5S - Dataspaces ========================================================
-
-
+ # === H5S - Dataspaces ========================================================
# Basic operations
hid_t H5Screate(H5S_class_t type)
@@ -365,22 +390,14 @@ hdf5:
hssize_t H5Sget_select_hyper_nblocks(hid_t space_id )
herr_t H5Sget_select_hyper_blocklist(hid_t space_id, hsize_t startblock, hsize_t numblocks, hsize_t *buf )
- herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, hsize_t *start, hsize_t *_stride, hsize_t *count, hsize_t *_block)
-
-
- herr_t H5Sencode(hid_t obj_id, void *buf, size_t *nalloc)
- hid_t H5Sdecode(void *buf)
-
-
-# === H5T - Datatypes =========================================================
+ herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, hsize_t *start, hsize_t *_stride, hsize_t *count, hsize_t *_block)
+ herr_t H5Sencode(hid_t obj_id, void *buf, size_t *nalloc)
+ hid_t H5Sdecode(void *buf)
- #hid_t H5P_DEFAULT
-
-
- # --- Datatype operations ---------------------------------------------------
+ # === H5T - Datatypes =========================================================
# General operations
hid_t H5Tcreate(H5T_class_t type, size_t size)
@@ -395,11 +412,16 @@ hdf5:
hid_t H5Tget_super(hid_t type)
htri_t H5Tdetect_class(hid_t type_id, H5T_class_t dtype_class)
herr_t H5Tclose(hid_t type_id)
-
hid_t H5Tget_native_type(hid_t type_id, H5T_direction_t direction)
+ herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id)
- # Not for public API
+ hid_t H5Tdecode(unsigned char *buf)
+ herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc)
+
+ H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata)
herr_t H5Tconvert(hid_t src_id, hid_t dst_id, size_t nelmts, void *buf, void *background, hid_t plist_id)
+ herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func)
+ herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func)
# Atomic datatypes
herr_t H5Tset_size(hid_t type_id, size_t size)
@@ -434,8 +456,8 @@ hdf5:
herr_t H5Tset_strpad(hid_t type_id, H5T_str_t strpad)
# VLENs
- hid_t H5Tvlen_create(hid_t base_type_id)
- htri_t H5Tis_variable_str(hid_t dtype_id)
+ hid_t H5Tvlen_create(hid_t base_type_id)
+ htri_t H5Tis_variable_str(hid_t dtype_id)
# Compound data types
int H5Tget_nmembers(hid_t type_id)
@@ -448,111 +470,41 @@ hdf5:
herr_t H5Tpack(hid_t type_id)
# Enumerated types
- hid_t H5Tenum_create(hid_t base_id)
- herr_t H5Tenum_insert(hid_t type, char *name, void *value)
- herr_t H5Tenum_nameof( hid_t type, void *value, char *name, size_t size )
- herr_t H5Tenum_valueof( hid_t type, char *name, void *value )
- herr_t H5Tget_member_value(hid_t type, unsigned int memb_no, void *value )
+ hid_t H5Tenum_create(hid_t base_id)
+ herr_t H5Tenum_insert(hid_t type, char *name, void *value)
+ herr_t H5Tenum_nameof( hid_t type, void *value, char *name, size_t size )
+ herr_t H5Tenum_valueof( hid_t type, char *name, void *value )
+ herr_t H5Tget_member_value(hid_t type, unsigned int memb_no, void *value )
# Array data types
- hid_t H5Tarray_create(hid_t base_id, int ndims, hsize_t *dims, int *perm)
- int H5Tget_array_ndims(hid_t type_id)
- int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm)
+ hid_t H5Tarray_create(hid_t base_id, int ndims, hsize_t *dims, int *perm)
+ int H5Tget_array_ndims(hid_t type_id)
+ int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm)
# Opaque data types
herr_t H5Tset_tag(hid_t type_id, char* tag)
char* H5Tget_tag(hid_t type_id)
- # 1.8-specific functions
-
- hid_t H5Tdecode(unsigned char *buf)
- herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc)
-
- herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id)
-
- H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata)
-
- herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func)
- herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func)
-
+ # === H5Z - Filters =========================================================
-# === H5Z - Filters ===========================================================
+ htri_t H5Zfilter_avail(H5Z_filter_t id_)
+ herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags)
-
-
- htri_t H5Zfilter_avail(H5Z_filter_t id_)
- herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags)
-
-
-# === H5A - Attributes API ====================================================
-
-
-
- hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist)
- hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx)
- hid_t H5Aopen_name(hid_t loc_id, char *name)
- herr_t H5Aclose(hid_t attr_id)
- herr_t H5Adelete(hid_t loc_id, char *name)
-
- herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf)
- herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf )
-
- int H5Aget_num_attrs(hid_t loc_id)
- ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf)
- hid_t H5Aget_space(hid_t attr_id)
- hid_t H5Aget_type(hid_t attr_id)
- herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data)
-
-
-
- herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id)
- herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id)
-
- hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id)
-
- herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id)
- herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id)
- herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id)
- htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id)
- htri_t H5Aexists(hid_t obj_id, char *attr_name)
-
- herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name)
- herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id)
-
- herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo)
- herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id)
- herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id)
-
- herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data)
-
- hsize_t H5Aget_storage_size(hid_t attr_id)
-
- MPI herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info)
- MPI herr_t H5Pset_fapl_mpiposix(hid_t fapl_id, MPI_Comm comm, hbool_t hints)
- MPI 1.8.9 herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag)
- MPI 1.8.9 herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag)
-
hdf5_hl:
-# === H5DS - Dimension Scales API =============================================
-
- herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx)
-
- herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx)
-
- herr_t H5DSset_scale(hid_t dsid, char *dimname)
-
- int H5DSget_num_scales(hid_t did, unsigned int dim)
-
- herr_t H5DSset_label(hid_t did, unsigned int idx, char *label)
-
- ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size)
-
- ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size)
- htri_t H5DSis_scale(hid_t did)
+ # === H5DS - Dimension Scales API =============================================
- herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, void *visitor_data)
+ ERROR herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx)
+ ERROR herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx)
+ ERROR htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx)
+ ERROR herr_t H5DSset_scale(hid_t dsid, char *dimname)
+ ERROR int H5DSget_num_scales(hid_t did, unsigned int dim)
- htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx)
+ ERROR herr_t H5DSset_label(hid_t did, unsigned int idx, char *label)
+ ERROR ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size)
+
+ ERROR ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size)
+ ERROR htri_t H5DSis_scale(hid_t did)
+ ERROR herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, void *visitor_data)
diff --git a/h5py/config.pxi b/h5py/config.pxi
deleted file mode 100644
index 5a9aca3..0000000
--- a/h5py/config.pxi
+++ /dev/null
@@ -1,4 +0,0 @@
-# This file is automatically generated by the h5py setup script. Don't modify.
-
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-DEF HDF5_VERSION = (1, 9, 170)
diff --git a/h5py/defs.c b/h5py/defs.c
deleted file mode 100644
index 109ed85..0000000
--- a/h5py/defs.c
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@@ -1,81484 +0,0 @@
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- * if r<0:
- */
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-
- /* "h5py/defs.pyx":59
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- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Dopen(file_id, name)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_9);
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-
- /* "h5py/defs.pyx":68
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Dclose(dset_id)
- * if r<0:
- */
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-
- /* "h5py/defs.pyx":77
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- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Dget_space(dset_id)
- * if r<0:
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_11));
-
- /* "h5py/defs.pyx":86
- * cdef herr_t H5Dget_space_status(hid_t dset_id, H5D_space_status_t *status) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Dget_space_status(dset_id, status)
- * if r<0:
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_12));
-
- /* "h5py/defs.pyx":95
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- * cdef hid_t r
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- * r = _hdf5.H5Dget_type(dset_id)
- * if r<0:
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- __Pyx_GOTREF(__pyx_k_tuple_13);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_13));
-
- /* "h5py/defs.pyx":104
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- * cdef hid_t r
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- * r = _hdf5.H5Dget_create_plist(dataset_id)
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- __Pyx_GOTREF(__pyx_k_tuple_14);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_14));
-
- /* "h5py/defs.pyx":113
- * cdef haddr_t H5Dget_offset(hid_t dset_id) except *:
- * cdef haddr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Dget_offset(dset_id)
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- __Pyx_GOTREF(__pyx_k_tuple_15);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_15));
-
- /* "h5py/defs.pyx":122
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- * cdef hsize_t r
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- * r = _hdf5.H5Dget_storage_size(dset_id)
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_16));
-
- /* "h5py/defs.pyx":131
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- * cdef herr_t r
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- * r = _hdf5.H5Dread(dset_id, mem_type_id, mem_space_id, file_space_id, plist_id, buf)
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- __Pyx_GOTREF(__pyx_k_tuple_17);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_17));
-
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_18);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_18));
-
- /* "h5py/defs.pyx":149
- * cdef herr_t H5Dextend(hid_t dataset_id, hsize_t *size) except *:
- * cdef herr_t r
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- * r = _hdf5.H5Dextend(dataset_id, size)
- * if r<0:
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- __Pyx_GOTREF(__pyx_k_tuple_19);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_19));
-
- /* "h5py/defs.pyx":158
- * cdef herr_t H5Dfill(void *fill, hid_t fill_type_id, void *buf, hid_t buf_type_id, hid_t space_id ) except *:
- * cdef herr_t r
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- * r = _hdf5.H5Dfill(fill, fill_type_id, buf, buf_type_id, space_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_20);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_20));
-
- /* "h5py/defs.pyx":167
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_21);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_21));
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- * cdef herr_t r
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- * r = _hdf5.H5Dvlen_reclaim(type_id, space_id, plist, buf)
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- * cdef herr_t r
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- * r = _hdf5.H5Diterate(buf, type_id, space_id, op, operator_data)
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- */
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-
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- * cdef herr_t r
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- */
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- * cdef hid_t r
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- * cdef hid_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_29));
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_30));
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_31));
-
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-
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_33));
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_39));
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- /* "h5py/defs.pyx":338
- * cdef herr_t H5Fget_vfd_handle(hid_t file_id, hid_t fapl_id, void **file_handle) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Fget_vfd_handle(file_id, fapl_id, file_handle)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_40);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_40));
-
- /* "h5py/defs.pyx":347
- * cdef herr_t H5Fget_intent(hid_t file_id, unsigned int *intent) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Fget_intent(file_id, intent)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_41));
-
- /* "h5py/defs.pyx":356
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Fget_mdc_config(file_id, config_ptr)
- * if r<0:
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_42));
-
- /* "h5py/defs.pyx":365
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- * cdef herr_t r
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- * r = _hdf5.H5Fget_mdc_hit_rate(file_id, hit_rate_ptr)
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_43));
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- /* "h5py/defs.pyx":374
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- * cdef herr_t r
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- * r = _hdf5.H5Fget_mdc_size(file_id, max_size_ptr, min_clean_size_ptr, cur_size_ptr, cur_num_entries_ptr)
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- /* "h5py/defs.pyx":383
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- * cdef herr_t r
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- * r = _hdf5.H5Freset_mdc_hit_rate_stats(file_id)
- * if r<0:
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- /* "h5py/defs.pyx":392
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Fset_mdc_config(file_id, config_ptr)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_46));
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- /* "h5py/defs.pyx":401
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- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
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-
- /* "h5py/defs.pyx":410
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- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_48);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_48));
-
- /* "h5py/defs.pyx":419
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_49);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_49));
-
- /* "h5py/defs.pyx":428
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_50);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_50));
-
- /* "h5py/defs.pyx":437
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_51));
-
- /* "h5py/defs.pyx":446
- * cdef herr_t H5Gmove2(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_52));
-
- /* "h5py/defs.pyx":455
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Gget_num_objs(loc_id, num_obj)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_53));
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- * cdef int r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_54));
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- * cdef int r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_55));
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- * cdef herr_t r
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- * cdef herr_t r
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- * cdef herr_t r
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-
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- * cdef herr_t r
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- * cdef hid_t r
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- * cdef hid_t r
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- * cdef herr_t r
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- __Pyx_GOTREF(__pyx_k_tuple_69);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_69));
-
- /* "h5py/defs.pyx":608
- * cdef int H5Idec_ref(hid_t obj_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Idec_ref(obj_id)
- * if r<0:
- */
- __pyx_k_tuple_70 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_70)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 608; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_70);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_70));
-
- /* "h5py/defs.pyx":617
- * cdef int H5Iget_ref(hid_t obj_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Iget_ref(obj_id)
- * if r<0:
- */
- __pyx_k_tuple_71 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_71)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 617; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_71);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_71));
-
- /* "h5py/defs.pyx":626
- * cdef int H5Iinc_ref(hid_t obj_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Iinc_ref(obj_id)
- * if r<0:
- */
- __pyx_k_tuple_72 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_72)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 626; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_72);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_72));
-
- /* "h5py/defs.pyx":635
- * cdef herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lmove(src_loc, src_name, dst_loc, dst_name, lcpl_id, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_73 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_73)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 635; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_73);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_73));
-
- /* "h5py/defs.pyx":644
- * cdef herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lcopy(src_loc, src_name, dst_loc, dst_name, lcpl_id, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_74 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_74)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 644; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_74);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_74));
-
- /* "h5py/defs.pyx":653
- * cdef herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lcreate_hard(cur_loc, cur_name, dst_loc, dst_name, lcpl_id, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_75 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_75)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 653; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_75);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_75));
-
- /* "h5py/defs.pyx":662
- * cdef herr_t H5Lcreate_soft(char *link_target, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lcreate_soft(link_target, link_loc_id, link_name, lcpl_id, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_76 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_76)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 662; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_76);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_76));
-
- /* "h5py/defs.pyx":671
- * cdef herr_t H5Ldelete(hid_t loc_id, char *name, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Ldelete(loc_id, name, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_77 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_77)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 671; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_77);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_77));
-
- /* "h5py/defs.pyx":680
- * cdef herr_t H5Ldelete_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Ldelete_by_idx(loc_id, group_name, idx_type, order, n, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_78 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_78)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 680; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_78);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_78));
-
- /* "h5py/defs.pyx":689
- * cdef herr_t H5Lget_val(hid_t loc_id, char *name, void *bufout, size_t size, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lget_val(loc_id, name, bufout, size, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_79 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_79)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 689; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_79);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_79));
-
- /* "h5py/defs.pyx":698
- * cdef herr_t H5Lget_val_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, void *bufout, size_t size, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lget_val_by_idx(loc_id, group_name, idx_type, order, n, bufout, size, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_80 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_80)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 698; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_80);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_80));
-
- /* "h5py/defs.pyx":707
- * cdef htri_t H5Lexists(hid_t loc_id, char *name, hid_t lapl_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lexists(loc_id, name, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_81 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_81)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 707; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_81);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_81));
-
- /* "h5py/defs.pyx":716
- * cdef herr_t H5Lget_info(hid_t loc_id, char *name, H5L_info_t *linfo, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lget_info(loc_id, name, linfo, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_82 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_82)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 716; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_82);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_82));
-
- /* "h5py/defs.pyx":725
- * cdef herr_t H5Lget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5L_info_t *linfo, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lget_info_by_idx(loc_id, group_name, idx_type, order, n, linfo, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_83);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_83));
-
- /* "h5py/defs.pyx":734
- * cdef ssize_t H5Lget_name_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, char *name, size_t size, hid_t lapl_id) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lget_name_by_idx(loc_id, group_name, idx_type, order, n, name, size, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_84);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_84));
-
- /* "h5py/defs.pyx":743
- * cdef herr_t H5Literate(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Literate(grp_id, idx_type, order, idx, op, op_data)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_85);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_85));
-
- /* "h5py/defs.pyx":752
- * cdef herr_t H5Literate_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Literate_by_name(loc_id, group_name, idx_type, order, idx, op, op_data, lapl_id)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_86));
-
- /* "h5py/defs.pyx":761
- * cdef herr_t H5Lvisit(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lvisit(grp_id, idx_type, order, op, op_data)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_87);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_87));
-
- /* "h5py/defs.pyx":770
- * cdef herr_t H5Lvisit_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lvisit_by_name(loc_id, group_name, idx_type, order, op, op_data, lapl_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_88);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_88));
-
- /* "h5py/defs.pyx":779
- * cdef herr_t H5Lunpack_elink_val(void *ext_linkval, size_t link_size, unsigned *flags, char **filename, char **obj_path) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lunpack_elink_val(ext_linkval, link_size, flags, filename, obj_path)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_89);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_89));
-
- /* "h5py/defs.pyx":788
- * cdef herr_t H5Lcreate_external(char *file_name, char *obj_name, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Lcreate_external(file_name, obj_name, link_loc_id, link_name, lcpl_id, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_90);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_90));
-
- /* "h5py/defs.pyx":797
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- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oopen(loc_id, name, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_91 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_91)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 797; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_91);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_91));
-
- /* "h5py/defs.pyx":806
- * cdef hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oopen_by_addr(loc_id, addr)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_92));
-
- /* "h5py/defs.pyx":815
- * cdef hid_t H5Oopen_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_93));
-
- /* "h5py/defs.pyx":824
- * cdef herr_t H5Oget_info(hid_t loc_id, H5O_info_t *oinfo) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_94));
-
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- * cdef herr_t H5Oget_info_by_name(hid_t loc_id, char *name, H5O_info_t *oinfo, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_95));
-
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- * cdef herr_t H5Oget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5O_info_t *oinfo, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_96));
-
- /* "h5py/defs.pyx":851
- * cdef herr_t H5Olink(hid_t obj_id, hid_t new_loc_id, char *new_name, hid_t lcpl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_97));
-
- /* "h5py/defs.pyx":860
- * cdef herr_t H5Ocopy(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name, hid_t ocpypl_id, hid_t lcpl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Ocopy(src_loc_id, src_name, dst_loc_id, dst_name, ocpypl_id, lcpl_id)
- * if r<0:
- */
- __pyx_k_tuple_98 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_98)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_98);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_98));
-
- /* "h5py/defs.pyx":869
- * cdef herr_t H5Oincr_refcount(hid_t object_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oincr_refcount(object_id)
- * if r<0:
- */
- __pyx_k_tuple_99 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_99)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 869; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_99);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_99));
-
- /* "h5py/defs.pyx":878
- * cdef herr_t H5Odecr_refcount(hid_t object_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Odecr_refcount(object_id)
- * if r<0:
- */
- __pyx_k_tuple_100 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_100)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_100);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_100));
-
- /* "h5py/defs.pyx":887
- * cdef herr_t H5Oset_comment(hid_t obj_id, char *comment) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oset_comment(obj_id, comment)
- * if r<0:
- */
- __pyx_k_tuple_101 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_101)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 887; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_101);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_101));
-
- /* "h5py/defs.pyx":896
- * cdef herr_t H5Oset_comment_by_name(hid_t loc_id, char *name, char *comment, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oset_comment_by_name(loc_id, name, comment, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_102 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_102)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 896; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_102);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_102));
-
- /* "h5py/defs.pyx":905
- * cdef ssize_t H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oget_comment(obj_id, comment, bufsize)
- * if r<0:
- */
- __pyx_k_tuple_103 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_103)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 905; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_103);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_103));
-
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- * cdef ssize_t H5Oget_comment_by_name(hid_t loc_id, char *name, char *comment, size_t bufsize, hid_t lapl_id) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oget_comment_by_name(loc_id, name, comment, bufsize, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_104 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_104)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 914; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_104);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_104));
-
- /* "h5py/defs.pyx":923
- * cdef herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Ovisit(obj_id, idx_type, order, op, op_data)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_105);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_105));
-
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- * cdef herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Ovisit_by_name(loc_id, obj_name, idx_type, order, op, op_data, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_106);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_106));
-
- /* "h5py/defs.pyx":941
- * cdef herr_t H5Oclose(hid_t object_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Oclose(object_id)
- * if r<0:
- */
- __pyx_k_tuple_107 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_107)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 941; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_107));
-
- /* "h5py/defs.pyx":950
- * cdef hid_t H5Pcreate(hid_t plist_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pcreate(plist_id)
- * if r<0:
- */
- __pyx_k_tuple_108 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_108)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 950; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_108);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_108));
-
- /* "h5py/defs.pyx":959
- * cdef hid_t H5Pcopy(hid_t plist_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pcopy(plist_id)
- * if r<0:
- */
- __pyx_k_tuple_109 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_109)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 959; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_109);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_109));
-
- /* "h5py/defs.pyx":968
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- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_class(plist_id)
- * if r<0:
- */
- __pyx_k_tuple_110 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_110)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 968; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_110);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_110));
-
- /* "h5py/defs.pyx":977
- * cdef herr_t H5Pclose(hid_t plist_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pclose(plist_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_111);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_111));
-
- /* "h5py/defs.pyx":986
- * cdef htri_t H5Pequal( hid_t id1, hid_t id2 ) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pequal(id1, id2)
- * if r<0:
- */
- __pyx_k_tuple_112 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_112)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 986; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_112);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_112));
-
- /* "h5py/defs.pyx":995
- * cdef herr_t H5Pclose_class(hid_t id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pclose_class(id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_113);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_113));
-
- /* "h5py/defs.pyx":1004
- * cdef herr_t H5Pget_version(hid_t plist, unsigned int *super_, unsigned int* freelist, unsigned int *stab, unsigned int *shhdr) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_version(plist, super_, freelist, stab, shhdr)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_114);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_114));
-
- /* "h5py/defs.pyx":1013
- * cdef herr_t H5Pset_userblock(hid_t plist, hsize_t size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_userblock(plist, size)
- * if r<0:
- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_115));
-
- /* "h5py/defs.pyx":1022
- * cdef herr_t H5Pget_userblock(hid_t plist, hsize_t * size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_userblock(plist, size)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_116);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_116));
-
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- * cdef herr_t H5Pset_sizes(hid_t plist, size_t sizeof_addr, size_t sizeof_size) except *:
- * cdef herr_t r
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- * r = _hdf5.H5Pset_sizes(plist, sizeof_addr, sizeof_size)
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- __Pyx_GOTREF(__pyx_k_tuple_117);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_117));
-
- /* "h5py/defs.pyx":1040
- * cdef herr_t H5Pget_sizes(hid_t plist, size_t *sizeof_addr, size_t *sizeof_size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_sizes(plist, sizeof_addr, sizeof_size)
- * if r<0:
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- __Pyx_GOTREF(__pyx_k_tuple_118);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_118));
-
- /* "h5py/defs.pyx":1049
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_119));
-
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- * cdef herr_t H5Pget_sym_k(hid_t plist, unsigned int *ik, unsigned int *lk) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_120));
-
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- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_121));
-
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- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_122));
-
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- * cdef herr_t H5Pset_fclose_degree(hid_t fapl_id, H5F_close_degree_t fc_degree) except *:
- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_123));
-
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- * cdef herr_t H5Pget_fclose_degree(hid_t fapl_id, H5F_close_degree_t *fc_degree) except *:
- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_124));
-
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- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_125));
-
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- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_126));
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- * cdef herr_t r
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_127));
-
- /* "h5py/defs.pyx":1130
- * cdef herr_t H5Pget_fapl_family( hid_t fapl_id, hsize_t *memb_size, hid_t *memb_fapl_id ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_fapl_family(fapl_id, memb_size, memb_fapl_id)
- * if r<0:
- */
- __pyx_k_tuple_128 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_128)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1130; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_128);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_128));
-
- /* "h5py/defs.pyx":1139
- * cdef herr_t H5Pset_family_offset( hid_t fapl_id, hsize_t offset) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_family_offset(fapl_id, offset)
- * if r<0:
- */
- __pyx_k_tuple_129 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_129)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1139; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_129);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_129));
-
- /* "h5py/defs.pyx":1148
- * cdef herr_t H5Pget_family_offset( hid_t fapl_id, hsize_t *offset) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_family_offset(fapl_id, offset)
- * if r<0:
- */
- __pyx_k_tuple_130 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_130)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1148; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_130);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_130));
-
- /* "h5py/defs.pyx":1157
- * cdef herr_t H5Pset_fapl_log(hid_t fapl_id, char *logfile, unsigned int flags, size_t buf_size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fapl_log(fapl_id, logfile, flags, buf_size)
- * if r<0:
- */
- __pyx_k_tuple_131 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_131)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1157; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_131);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_131));
-
- /* "h5py/defs.pyx":1166
- * cdef herr_t H5Pset_fapl_multi(hid_t fapl_id, H5FD_mem_t *memb_map, hid_t *memb_fapl, char **memb_name, haddr_t *memb_addr, hbool_t relax) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fapl_multi(fapl_id, memb_map, memb_fapl, memb_name, memb_addr, relax)
- * if r<0:
- */
- __pyx_k_tuple_132 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_132)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1166; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_132);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_132));
-
- /* "h5py/defs.pyx":1175
- * cdef herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, int rdcc_nelmts, size_t rdcc_nbytes, double rdcc_w0) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_cache(plist_id, mdc_nelmts, rdcc_nelmts, rdcc_nbytes, rdcc_w0)
- * if r<0:
- */
- __pyx_k_tuple_133 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_133)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1175; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_133);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_133));
-
- /* "h5py/defs.pyx":1184
- * cdef herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, int *rdcc_nelmts, size_t *rdcc_nbytes, double *rdcc_w0) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_cache(plist_id, mdc_nelmts, rdcc_nelmts, rdcc_nbytes, rdcc_w0)
- * if r<0:
- */
- __pyx_k_tuple_134 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_134)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1184; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_134);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_134));
-
- /* "h5py/defs.pyx":1193
- * cdef herr_t H5Pset_fapl_sec2(hid_t fapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fapl_sec2(fapl_id)
- * if r<0:
- */
- __pyx_k_tuple_135 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_135)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1193; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_135);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_135));
-
- /* "h5py/defs.pyx":1202
- * cdef herr_t H5Pset_fapl_stdio(hid_t fapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fapl_stdio(fapl_id)
- * if r<0:
- */
- __pyx_k_tuple_136 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_136)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1202; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_136);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_136));
-
- /* "h5py/defs.pyx":1211
- * cdef hid_t H5Pget_driver(hid_t fapl_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_driver(fapl_id)
- * if r<0:
- */
- __pyx_k_tuple_137 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_137)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1211; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_137);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_137));
-
- /* "h5py/defs.pyx":1220
- * cdef herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_mdc_config(plist_id, config_ptr)
- * if r<0:
- */
- __pyx_k_tuple_138 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_138)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1220; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_138);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_138));
-
- /* "h5py/defs.pyx":1229
- * cdef herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_mdc_config(plist_id, config_ptr)
- * if r<0:
- */
- __pyx_k_tuple_139 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_139)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1229; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_139);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_139));
-
- /* "h5py/defs.pyx":1238
- * cdef herr_t H5Pset_layout(hid_t plist, int layout) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_layout(plist, layout)
- * if r<0:
- */
- __pyx_k_tuple_140 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_140)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_140);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_140));
-
- /* "h5py/defs.pyx":1247
- * cdef H5D_layout_t H5Pget_layout(hid_t plist) except *:
- * cdef H5D_layout_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_layout(plist)
- * if r<0:
- */
- __pyx_k_tuple_141 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_141)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1247; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_141);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_141));
-
- /* "h5py/defs.pyx":1256
- * cdef herr_t H5Pset_chunk(hid_t plist, int ndims, hsize_t * dim) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_chunk(plist, ndims, dim)
- * if r<0:
- */
- __pyx_k_tuple_142 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_142)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1256; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_142);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_142));
-
- /* "h5py/defs.pyx":1265
- * cdef int H5Pget_chunk(hid_t plist, int max_ndims, hsize_t * dims ) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_chunk(plist, max_ndims, dims)
- * if r<0:
- */
- __pyx_k_tuple_143 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_143)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1265; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_143);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_143));
-
- /* "h5py/defs.pyx":1274
- * cdef herr_t H5Pset_deflate( hid_t plist, int level) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_deflate(plist, level)
- * if r<0:
- */
- __pyx_k_tuple_144 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_144)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1274; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_144);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_144));
-
- /* "h5py/defs.pyx":1283
- * cdef herr_t H5Pset_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fill_value(plist_id, type_id, value)
- * if r<0:
- */
- __pyx_k_tuple_145 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_145)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_145);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_145));
-
- /* "h5py/defs.pyx":1292
- * cdef herr_t H5Pget_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_fill_value(plist_id, type_id, value)
- * if r<0:
- */
- __pyx_k_tuple_146 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_146)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1292; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_146);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_146));
-
- /* "h5py/defs.pyx":1301
- * cdef herr_t H5Pfill_value_defined(hid_t plist_id, H5D_fill_value_t *status ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pfill_value_defined(plist_id, status)
- * if r<0:
- */
- __pyx_k_tuple_147 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_147)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1301; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_147);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_147));
-
- /* "h5py/defs.pyx":1310
- * cdef herr_t H5Pset_fill_time(hid_t plist_id, H5D_fill_time_t fill_time ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fill_time(plist_id, fill_time)
- * if r<0:
- */
- __pyx_k_tuple_148 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_148)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1310; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_148);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_148));
-
- /* "h5py/defs.pyx":1319
- * cdef herr_t H5Pget_fill_time(hid_t plist_id, H5D_fill_time_t *fill_time ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_fill_time(plist_id, fill_time)
- * if r<0:
- */
- __pyx_k_tuple_149 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_149)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1319; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_149);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_149));
-
- /* "h5py/defs.pyx":1328
- * cdef herr_t H5Pset_alloc_time(hid_t plist_id, H5D_alloc_time_t alloc_time ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_alloc_time(plist_id, alloc_time)
- * if r<0:
- */
- __pyx_k_tuple_150 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_150)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1328; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_150);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_150));
-
- /* "h5py/defs.pyx":1337
- * cdef herr_t H5Pget_alloc_time(hid_t plist_id, H5D_alloc_time_t *alloc_time ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_alloc_time(plist_id, alloc_time)
- * if r<0:
- */
- __pyx_k_tuple_151 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_151)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1337; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_151);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_151));
-
- /* "h5py/defs.pyx":1346
- * cdef herr_t H5Pset_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int* cd_values ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_filter(plist, filter, flags, cd_nelmts, cd_values)
- * if r<0:
- */
- __pyx_k_tuple_152 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_152)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1346; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_152);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_152));
-
- /* "h5py/defs.pyx":1355
- * cdef htri_t H5Pall_filters_avail(hid_t dcpl_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pall_filters_avail(dcpl_id)
- * if r<0:
- */
- __pyx_k_tuple_153 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_153)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1355; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_153);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_153));
-
- /* "h5py/defs.pyx":1364
- * cdef int H5Pget_nfilters(hid_t plist) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_nfilters(plist)
- * if r<0:
- */
- __pyx_k_tuple_154 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_154)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1364; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_154);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_154));
-
- /* "h5py/defs.pyx":1373
- * cdef H5Z_filter_t H5Pget_filter(hid_t plist, unsigned int filter_number, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name ) except *:
- * cdef H5Z_filter_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_filter(plist, filter_number, flags, cd_nelmts, cd_values, namelen, name)
- * if r<0:
- */
- __pyx_k_tuple_155 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_155)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1373; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_155);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_155));
-
- /* "h5py/defs.pyx":1382
- * cdef herr_t H5Pget_filter_by_id( hid_t plist_id, H5Z_filter_t filter, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_filter_by_id(plist_id, filter, flags, cd_nelmts, cd_values, namelen, name)
- * if r<0:
- */
- __pyx_k_tuple_156 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_156)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1382; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_156);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_156));
-
- /* "h5py/defs.pyx":1391
- * cdef herr_t H5Pmodify_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int *cd_values) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pmodify_filter(plist, filter, flags, cd_nelmts, cd_values)
- * if r<0:
- */
- __pyx_k_tuple_157 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_157)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1391; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_157);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_157));
-
- /* "h5py/defs.pyx":1400
- * cdef herr_t H5Premove_filter(hid_t plist, H5Z_filter_t filter ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Premove_filter(plist, filter)
- * if r<0:
- */
- __pyx_k_tuple_158 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_158)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1400; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_158);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_158));
-
- /* "h5py/defs.pyx":1409
- * cdef herr_t H5Pset_fletcher32(hid_t plist) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_fletcher32(plist)
- * if r<0:
- */
- __pyx_k_tuple_159 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_159)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_159);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_159));
-
- /* "h5py/defs.pyx":1418
- * cdef herr_t H5Pset_shuffle(hid_t plist_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_shuffle(plist_id)
- * if r<0:
- */
- __pyx_k_tuple_160 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_160)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1418; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_160);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_160));
-
- /* "h5py/defs.pyx":1427
- * cdef herr_t H5Pset_szip(hid_t plist, unsigned int options_mask, unsigned int pixels_per_block) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_szip(plist, options_mask, pixels_per_block)
- * if r<0:
- */
- __pyx_k_tuple_161 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_161)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1427; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_161);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_161));
-
- /* "h5py/defs.pyx":1436
- * cdef herr_t H5Pset_scaleoffset(hid_t plist, H5Z_SO_scale_type_t scale_type, int scale_factor) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_scaleoffset(plist, scale_type, scale_factor)
- * if r<0:
- */
- __pyx_k_tuple_162 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_162)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1436; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_162);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_162));
-
- /* "h5py/defs.pyx":1445
- * cdef herr_t H5Pset_edc_check(hid_t plist, H5Z_EDC_t check) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_edc_check(plist, check)
- * if r<0:
- */
- __pyx_k_tuple_163 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_163)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1445; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_163);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_163));
-
- /* "h5py/defs.pyx":1454
- * cdef H5Z_EDC_t H5Pget_edc_check(hid_t plist) except *:
- * cdef H5Z_EDC_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_edc_check(plist)
- * if r<0:
- */
- __pyx_k_tuple_164 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_164)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1454; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_164);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_164));
-
- /* "h5py/defs.pyx":1463
- * cdef herr_t H5Pset_chunk_cache( hid_t dapl_id, size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0 ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0)
- * if r<0:
- */
- __pyx_k_tuple_165 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_165)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1463; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_165);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_165));
-
- /* "h5py/defs.pyx":1472
- * cdef herr_t H5Pget_chunk_cache( hid_t dapl_id, size_t *rdcc_nslots, size_t *rdcc_nbytes, double *rdcc_w0 ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0)
- * if r<0:
- */
- __pyx_k_tuple_166 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_166)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1472; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_166);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_166));
-
- /* "h5py/defs.pyx":1481
- * cdef herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_sieve_buf_size(fapl_id, size)
- * if r<0:
- */
- __pyx_k_tuple_167 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_167)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1481; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_167);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_167));
-
- /* "h5py/defs.pyx":1490
- * cdef herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_sieve_buf_size(fapl_id, size)
- * if r<0:
- */
- __pyx_k_tuple_168 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_168)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1490; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_168);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_168));
-
- /* "h5py/defs.pyx":1499
- * cdef herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_nlinks(plist_id, nlinks)
- * if r<0:
- */
- __pyx_k_tuple_169 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_169)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1499; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_169);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_169));
-
- /* "h5py/defs.pyx":1508
- * cdef herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_nlinks(plist_id, nlinks)
- * if r<0:
- */
- __pyx_k_tuple_170 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_170)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1508; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_170);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_170));
-
- /* "h5py/defs.pyx":1517
- * cdef herr_t H5Pset_elink_prefix(hid_t plist_id, char *prefix) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_elink_prefix(plist_id, prefix)
- * if r<0:
- */
- __pyx_k_tuple_171 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_171)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1517; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_171);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_171));
-
- /* "h5py/defs.pyx":1526
- * cdef ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_elink_prefix(plist_id, prefix, size)
- * if r<0:
- */
- __pyx_k_tuple_172 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_172)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1526; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_172);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_172));
-
- /* "h5py/defs.pyx":1535
- * cdef hid_t H5Pget_elink_fapl(hid_t lapl_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_elink_fapl(lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_173 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_173)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1535; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_173);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_173));
-
- /* "h5py/defs.pyx":1544
- * cdef herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_elink_fapl(lapl_id, fapl_id)
- * if r<0:
- */
- __pyx_k_tuple_174 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_174)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1544; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_174);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_174));
-
- /* "h5py/defs.pyx":1553
- * cdef herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_create_intermediate_group(plist_id, crt_intmd)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_175);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_175));
-
- /* "h5py/defs.pyx":1562
- * cdef herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_create_intermediate_group(plist_id, crt_intmd)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_176);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_176));
-
- /* "h5py/defs.pyx":1571
- * cdef herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_copy_object(plist_id, crt_intmd)
- * if r<0:
- */
- __pyx_k_tuple_177 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_177)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1571; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_177);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_177));
-
- /* "h5py/defs.pyx":1580
- * cdef herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_copy_object(plist_id, crt_intmd)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_178);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_178));
-
- /* "h5py/defs.pyx":1589
- * cdef herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_char_encoding(plist_id, encoding)
- * if r<0:
- */
- __pyx_k_tuple_179 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_179)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1589; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_179);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_179));
-
- /* "h5py/defs.pyx":1598
- * cdef herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_char_encoding(plist_id, encoding)
- * if r<0:
- */
- __pyx_k_tuple_180 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_180)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1598; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_180);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_180));
-
- /* "h5py/defs.pyx":1607
- * cdef herr_t H5Pset_obj_track_times( hid_t ocpl_id, hbool_t track_times ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_obj_track_times(ocpl_id, track_times)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_181);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_181));
-
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- * cdef herr_t H5Pget_obj_track_times( hid_t ocpl_id, hbool_t *track_times ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_obj_track_times(ocpl_id, track_times)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_182);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_182));
-
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- * cdef herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_local_heap_size_hint(plist_id, size_hint)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_183);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_183));
-
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- * cdef herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_local_heap_size_hint(plist_id, size_hint)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_184);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_184));
-
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- * cdef herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_link_phase_change(plist_id, max_compact, min_dense)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_185);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_185));
-
- /* "h5py/defs.pyx":1652
- * cdef herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact , unsigned *min_dense) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_link_phase_change(plist_id, max_compact, min_dense)
- * if r<0:
- */
- __pyx_k_tuple_186 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_186)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1652; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_186);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_186));
-
- /* "h5py/defs.pyx":1661
- * cdef herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_est_link_info(plist_id, est_num_entries, est_name_len)
- * if r<0:
- */
- __pyx_k_tuple_187 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_187)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1661; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_187);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_187));
-
- /* "h5py/defs.pyx":1670
- * cdef herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries , unsigned *est_name_len) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_est_link_info(plist_id, est_num_entries, est_name_len)
- * if r<0:
- */
- __pyx_k_tuple_188 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_188)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1670; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_188);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_188));
-
- /* "h5py/defs.pyx":1679
- * cdef herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_link_creation_order(plist_id, crt_order_flags)
- * if r<0:
- */
- __pyx_k_tuple_189 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_189)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1679; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_189);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_189));
-
- /* "h5py/defs.pyx":1688
- * cdef herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_link_creation_order(plist_id, crt_order_flags)
- * if r<0:
- */
- __pyx_k_tuple_190 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_190)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1688; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_190);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_190));
-
- /* "h5py/defs.pyx":1697
- * cdef herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pset_libver_bounds(fapl_id, libver_low, libver_high)
- * if r<0:
- */
- __pyx_k_tuple_191 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_191)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1697; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_191);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_191));
-
- /* "h5py/defs.pyx":1706
- * cdef herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Pget_libver_bounds(fapl_id, libver_low, libver_high)
- * if r<0:
- */
- __pyx_k_tuple_192 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_192)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1706; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_192);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_192));
-
- /* "h5py/defs.pyx":1715
- * cdef herr_t H5Rcreate(void *ref, hid_t loc_id, char *name, H5R_type_t ref_type, hid_t space_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Rcreate(ref, loc_id, name, ref_type, space_id)
- * if r<0:
- */
- __pyx_k_tuple_193 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_193)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1715; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_193);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_193));
-
- /* "h5py/defs.pyx":1724
- * cdef hid_t H5Rdereference(hid_t obj_id, H5R_type_t ref_type, void *ref) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Rdereference(obj_id, ref_type, ref)
- * if r<0:
- */
- __pyx_k_tuple_194 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_194)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1724; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_194);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_194));
-
- /* "h5py/defs.pyx":1733
- * cdef hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, void *ref) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Rget_region(dataset, ref_type, ref)
- * if r<0:
- */
- __pyx_k_tuple_195 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_195)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1733; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_195);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_195));
-
- /* "h5py/defs.pyx":1742
- * cdef H5G_obj_t H5Rget_obj_type(hid_t id, H5R_type_t ref_type, void *ref) except *:
- * cdef H5G_obj_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Rget_obj_type(id, ref_type, ref)
- * if r<0:
- */
- __pyx_k_tuple_196 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_196)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1742; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_196);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_196));
-
- /* "h5py/defs.pyx":1751
- * cdef ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, void *ref, char *name, size_t size) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Rget_name(loc_id, ref_type, ref, name, size)
- * if r<0:
- */
- __pyx_k_tuple_197 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_197)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1751; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_197);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_197));
-
- /* "h5py/defs.pyx":1760
- * cdef hid_t H5Screate(H5S_class_t type) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Screate(type)
- * if r<0:
- */
- __pyx_k_tuple_198 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_198)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1760; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_198);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_198));
-
- /* "h5py/defs.pyx":1769
- * cdef hid_t H5Scopy(hid_t space_id ) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Scopy(space_id)
- * if r<0:
- */
- __pyx_k_tuple_199 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_199)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1769; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_199);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_199));
-
- /* "h5py/defs.pyx":1778
- * cdef herr_t H5Sclose(hid_t space_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sclose(space_id)
- * if r<0:
- */
- __pyx_k_tuple_200 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_200)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1778; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_200);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_200));
-
- /* "h5py/defs.pyx":1787
- * cdef hid_t H5Screate_simple(int rank, hsize_t *dims, hsize_t *maxdims) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Screate_simple(rank, dims, maxdims)
- * if r<0:
- */
- __pyx_k_tuple_201 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_201)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1787; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_201);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_201));
-
- /* "h5py/defs.pyx":1796
- * cdef htri_t H5Sis_simple(hid_t space_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sis_simple(space_id)
- * if r<0:
- */
- __pyx_k_tuple_202 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_202)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_202);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_202));
-
- /* "h5py/defs.pyx":1805
- * cdef herr_t H5Soffset_simple(hid_t space_id, hssize_t *offset ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Soffset_simple(space_id, offset)
- * if r<0:
- */
- __pyx_k_tuple_203 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_203)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1805; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_203);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_203));
-
- /* "h5py/defs.pyx":1814
- * cdef int H5Sget_simple_extent_ndims(hid_t space_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_simple_extent_ndims(space_id)
- * if r<0:
- */
- __pyx_k_tuple_204 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_204)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1814; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_204);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_204));
-
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- * cdef int H5Sget_simple_extent_dims(hid_t space_id, hsize_t *dims, hsize_t *maxdims) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_simple_extent_dims(space_id, dims, maxdims)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_205);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_205));
-
- /* "h5py/defs.pyx":1832
- * cdef hssize_t H5Sget_simple_extent_npoints(hid_t space_id) except *:
- * cdef hssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_simple_extent_npoints(space_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_206);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_206));
-
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- * cdef H5S_class_t H5Sget_simple_extent_type(hid_t space_id) except *:
- * cdef H5S_class_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_simple_extent_type(space_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_207);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_207));
-
- /* "h5py/defs.pyx":1850
- * cdef herr_t H5Sextent_copy(hid_t dest_space_id, hid_t source_space_id ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sextent_copy(dest_space_id, source_space_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_208);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_208));
-
- /* "h5py/defs.pyx":1859
- * cdef herr_t H5Sset_extent_simple(hid_t space_id, int rank, hsize_t *current_size, hsize_t *maximum_size ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_209);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_209));
-
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- * cdef herr_t H5Sset_extent_none(hid_t space_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_210);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_210));
-
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- * cdef H5S_sel_type r
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- * r = _hdf5.H5Sget_select_type(space_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_211);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_211));
-
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- * cdef hssize_t H5Sget_select_npoints(hid_t space_id) except *:
- * cdef hssize_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_212);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_212));
-
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- * cdef herr_t H5Sget_select_bounds(hid_t space_id, hsize_t *start, hsize_t *end) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_213);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_213));
-
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- * cdef herr_t H5Sselect_all(hid_t space_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_214);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_214));
-
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- * cdef herr_t H5Sselect_none(hid_t space_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sselect_none(space_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_215);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_215));
-
- /* "h5py/defs.pyx":1922
- * cdef htri_t H5Sselect_valid(hid_t space_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sselect_valid(space_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_216);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_216));
-
- /* "h5py/defs.pyx":1931
- * cdef hssize_t H5Sget_select_elem_npoints(hid_t space_id) except *:
- * cdef hssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_select_elem_npoints(space_id)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_217);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_217));
-
- /* "h5py/defs.pyx":1940
- * cdef herr_t H5Sget_select_elem_pointlist(hid_t space_id, hsize_t startpoint, hsize_t numpoints, hsize_t *buf) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_select_elem_pointlist(space_id, startpoint, numpoints, buf)
- * if r<0:
- */
- __pyx_k_tuple_218 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_218)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1940; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_218);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_218));
-
- /* "h5py/defs.pyx":1949
- * cdef herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, size_t num_elements, hsize_t **coord) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sselect_elements(space_id, op, num_elements, coord)
- * if r<0:
- */
- __pyx_k_tuple_219 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_219)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1949; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_219);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_219));
-
- /* "h5py/defs.pyx":1958
- * cdef hssize_t H5Sget_select_hyper_nblocks(hid_t space_id ) except *:
- * cdef hssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_select_hyper_nblocks(space_id)
- * if r<0:
- */
- __pyx_k_tuple_220 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_220)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1958; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_220);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_220));
-
- /* "h5py/defs.pyx":1967
- * cdef herr_t H5Sget_select_hyper_blocklist(hid_t space_id, hsize_t startblock, hsize_t numblocks, hsize_t *buf ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sget_select_hyper_blocklist(space_id, startblock, numblocks, buf)
- * if r<0:
- */
- __pyx_k_tuple_221 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_221)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1967; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_221);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_221));
-
- /* "h5py/defs.pyx":1976
- * cdef herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, hsize_t *start, hsize_t *_stride, hsize_t *count, hsize_t *_block) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sselect_hyperslab(space_id, op, start, _stride, count, _block)
- * if r<0:
- */
- __pyx_k_tuple_222 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_222)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1976; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_222);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_222));
-
- /* "h5py/defs.pyx":1985
- * cdef herr_t H5Sencode(hid_t obj_id, void *buf, size_t *nalloc) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sencode(obj_id, buf, nalloc)
- * if r<0:
- */
- __pyx_k_tuple_223 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_223)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1985; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_223);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_223));
-
- /* "h5py/defs.pyx":1994
- * cdef hid_t H5Sdecode(void *buf) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Sdecode(buf)
- * if r<0:
- */
- __pyx_k_tuple_224 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_224)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1994; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_224);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_224));
-
- /* "h5py/defs.pyx":2003
- * cdef hid_t H5Tcreate(H5T_class_t type, size_t size) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tcreate(type, size)
- * if r<0:
- */
- __pyx_k_tuple_225 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_225)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2003; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_225);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_225));
-
- /* "h5py/defs.pyx":2012
- * cdef hid_t H5Topen(hid_t loc, char* name) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Topen(loc, name)
- * if r<0:
- */
- __pyx_k_tuple_226 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_226)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2012; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_226);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_226));
-
- /* "h5py/defs.pyx":2021
- * cdef herr_t H5Tcommit(hid_t loc_id, char* name, hid_t type) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tcommit(loc_id, name, type)
- * if r<0:
- */
- __pyx_k_tuple_227 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_227)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2021; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_227);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_227));
-
- /* "h5py/defs.pyx":2030
- * cdef htri_t H5Tcommitted(hid_t type) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tcommitted(type)
- * if r<0:
- */
- __pyx_k_tuple_228 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_228)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2030; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_228);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_228));
-
- /* "h5py/defs.pyx":2039
- * cdef hid_t H5Tcopy(hid_t type_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tcopy(type_id)
- * if r<0:
- */
- __pyx_k_tuple_229 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_229)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2039; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_229);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_229));
-
- /* "h5py/defs.pyx":2048
- * cdef htri_t H5Tequal(hid_t type_id1, hid_t type_id2 ) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tequal(type_id1, type_id2)
- * if r<0:
- */
- __pyx_k_tuple_230 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_230)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2048; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_230);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_230));
-
- /* "h5py/defs.pyx":2057
- * cdef herr_t H5Tlock(hid_t type_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tlock(type_id)
- * if r<0:
- */
- __pyx_k_tuple_231 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_231)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2057; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_231);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_231));
-
- /* "h5py/defs.pyx":2066
- * cdef H5T_class_t H5Tget_class(hid_t type_id) except *:
- * cdef H5T_class_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_class(type_id)
- * if r<0:
- */
- __pyx_k_tuple_232 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_232)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2066; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_232);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_232));
-
- /* "h5py/defs.pyx":2075
- * cdef size_t H5Tget_size(hid_t type_id) except *:
- * cdef size_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_size(type_id)
- * if r==0:
- */
- __pyx_k_tuple_233 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_233)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2075; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_233);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_233));
-
- /* "h5py/defs.pyx":2084
- * cdef hid_t H5Tget_super(hid_t type) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_super(type)
- * if r<0:
- */
- __pyx_k_tuple_234 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_234)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2084; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_234);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_234));
-
- /* "h5py/defs.pyx":2093
- * cdef htri_t H5Tdetect_class(hid_t type_id, H5T_class_t dtype_class) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tdetect_class(type_id, dtype_class)
- * if r<0:
- */
- __pyx_k_tuple_235 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_235)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2093; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_235);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_235));
-
- /* "h5py/defs.pyx":2102
- * cdef herr_t H5Tclose(hid_t type_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tclose(type_id)
- * if r<0:
- */
- __pyx_k_tuple_236 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_236)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2102; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_236);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_236));
-
- /* "h5py/defs.pyx":2111
- * cdef hid_t H5Tget_native_type(hid_t type_id, H5T_direction_t direction) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_native_type(type_id, direction)
- * if r<0:
- */
- __pyx_k_tuple_237 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_237)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2111; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_237);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_237));
-
- /* "h5py/defs.pyx":2120
- * cdef herr_t H5Tconvert(hid_t src_id, hid_t dst_id, size_t nelmts, void *buf, void *background, hid_t plist_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tconvert(src_id, dst_id, nelmts, buf, background, plist_id)
- * if r<0:
- */
- __pyx_k_tuple_238 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_238)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2120; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_238);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_238));
-
- /* "h5py/defs.pyx":2129
- * cdef herr_t H5Tset_size(hid_t type_id, size_t size) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_size(type_id, size)
- * if r<0:
- */
- __pyx_k_tuple_239 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_239)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2129; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_239);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_239));
-
- /* "h5py/defs.pyx":2138
- * cdef H5T_order_t H5Tget_order(hid_t type_id) except *:
- * cdef H5T_order_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_order(type_id)
- * if r<0:
- */
- __pyx_k_tuple_240 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_240)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2138; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_240);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_240));
-
- /* "h5py/defs.pyx":2147
- * cdef herr_t H5Tset_order(hid_t type_id, H5T_order_t order) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_order(type_id, order)
- * if r<0:
- */
- __pyx_k_tuple_241 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_241)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2147; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_241);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_241));
-
- /* "h5py/defs.pyx":2156
- * cdef hsize_t H5Tget_precision(hid_t type_id) except *:
- * cdef hsize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_precision(type_id)
- * if r==0:
- */
- __pyx_k_tuple_242 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_242)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2156; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_242);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_242));
-
- /* "h5py/defs.pyx":2165
- * cdef herr_t H5Tset_precision(hid_t type_id, size_t prec) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_precision(type_id, prec)
- * if r<0:
- */
- __pyx_k_tuple_243 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_243)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2165; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_243);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_243));
-
- /* "h5py/defs.pyx":2174
- * cdef int H5Tget_offset(hid_t type_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_offset(type_id)
- * if r<0:
- */
- __pyx_k_tuple_244 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_244)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2174; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_244);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_244));
-
- /* "h5py/defs.pyx":2183
- * cdef herr_t H5Tset_offset(hid_t type_id, size_t offset) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_offset(type_id, offset)
- * if r<0:
- */
- __pyx_k_tuple_245 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_245)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2183; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_245);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_245));
-
- /* "h5py/defs.pyx":2192
- * cdef herr_t H5Tget_pad(hid_t type_id, H5T_pad_t * lsb, H5T_pad_t * msb ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_pad(type_id, lsb, msb)
- * if r<0:
- */
- __pyx_k_tuple_246 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_246)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2192; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_246);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_246));
-
- /* "h5py/defs.pyx":2201
- * cdef herr_t H5Tset_pad(hid_t type_id, H5T_pad_t lsb, H5T_pad_t msb ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_pad(type_id, lsb, msb)
- * if r<0:
- */
- __pyx_k_tuple_247 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_247)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2201; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_247);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_247));
-
- /* "h5py/defs.pyx":2210
- * cdef H5T_sign_t H5Tget_sign(hid_t type_id) except *:
- * cdef H5T_sign_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_sign(type_id)
- * if r<0:
- */
- __pyx_k_tuple_248 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_248)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2210; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_248);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_248));
-
- /* "h5py/defs.pyx":2219
- * cdef herr_t H5Tset_sign(hid_t type_id, H5T_sign_t sign) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_sign(type_id, sign)
- * if r<0:
- */
- __pyx_k_tuple_249 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_249)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_249);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_249));
-
- /* "h5py/defs.pyx":2228
- * cdef herr_t H5Tget_fields(hid_t type_id, size_t *spos, size_t *epos, size_t *esize, size_t *mpos, size_t *msize ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_fields(type_id, spos, epos, esize, mpos, msize)
- * if r<0:
- */
- __pyx_k_tuple_250 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_250)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2228; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_250);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_250));
-
- /* "h5py/defs.pyx":2237
- * cdef herr_t H5Tset_fields(hid_t type_id, size_t spos, size_t epos, size_t esize, size_t mpos, size_t msize ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_fields(type_id, spos, epos, esize, mpos, msize)
- * if r<0:
- */
- __pyx_k_tuple_251 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_251)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2237; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_251);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_251));
-
- /* "h5py/defs.pyx":2246
- * cdef size_t H5Tget_ebias(hid_t type_id) except *:
- * cdef size_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_ebias(type_id)
- * if r==0:
- */
- __pyx_k_tuple_252 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_252)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2246; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_252);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_252));
-
- /* "h5py/defs.pyx":2255
- * cdef herr_t H5Tset_ebias(hid_t type_id, size_t ebias) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_ebias(type_id, ebias)
- * if r<0:
- */
- __pyx_k_tuple_253 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_253)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2255; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_253);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_253));
-
- /* "h5py/defs.pyx":2264
- * cdef H5T_norm_t H5Tget_norm(hid_t type_id) except *:
- * cdef H5T_norm_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_norm(type_id)
- * if r<0:
- */
- __pyx_k_tuple_254 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_254)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2264; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_254);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_254));
-
- /* "h5py/defs.pyx":2273
- * cdef herr_t H5Tset_norm(hid_t type_id, H5T_norm_t norm) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_norm(type_id, norm)
- * if r<0:
- */
- __pyx_k_tuple_255 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_255)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2273; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_255);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_255));
-
- /* "h5py/defs.pyx":2282
- * cdef H5T_pad_t H5Tget_inpad(hid_t type_id) except *:
- * cdef H5T_pad_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_inpad(type_id)
- * if r<0:
- */
- __pyx_k_tuple_256 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_256)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2282; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_256);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_256));
-
- /* "h5py/defs.pyx":2291
- * cdef herr_t H5Tset_inpad(hid_t type_id, H5T_pad_t inpad) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_inpad(type_id, inpad)
- * if r<0:
- */
- __pyx_k_tuple_257 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_257)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2291; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_257);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_257));
-
- /* "h5py/defs.pyx":2300
- * cdef H5T_cset_t H5Tget_cset(hid_t type_id) except *:
- * cdef H5T_cset_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_cset(type_id)
- * if r<0:
- */
- __pyx_k_tuple_258 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_258)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2300; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_258);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_258));
-
- /* "h5py/defs.pyx":2309
- * cdef herr_t H5Tset_cset(hid_t type_id, H5T_cset_t cset) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_cset(type_id, cset)
- * if r<0:
- */
- __pyx_k_tuple_259 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_259)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2309; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_259);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_259));
-
- /* "h5py/defs.pyx":2318
- * cdef H5T_str_t H5Tget_strpad(hid_t type_id) except *:
- * cdef H5T_str_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_strpad(type_id)
- * if r<0:
- */
- __pyx_k_tuple_260 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_260)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2318; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_260);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_260));
-
- /* "h5py/defs.pyx":2327
- * cdef herr_t H5Tset_strpad(hid_t type_id, H5T_str_t strpad) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tset_strpad(type_id, strpad)
- * if r<0:
- */
- __pyx_k_tuple_261 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_261)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2327; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_261);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_261));
-
- /* "h5py/defs.pyx":2336
- * cdef hid_t H5Tvlen_create(hid_t base_type_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tvlen_create(base_type_id)
- * if r<0:
- */
- __pyx_k_tuple_262 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_262)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2336; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_262);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_262));
-
- /* "h5py/defs.pyx":2345
- * cdef htri_t H5Tis_variable_str(hid_t dtype_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tis_variable_str(dtype_id)
- * if r<0:
- */
- __pyx_k_tuple_263 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_263)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2345; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_263);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_263));
-
- /* "h5py/defs.pyx":2354
- * cdef int H5Tget_nmembers(hid_t type_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_nmembers(type_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_264);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_264));
-
- /* "h5py/defs.pyx":2363
- * cdef H5T_class_t H5Tget_member_class(hid_t type_id, int member_no) except *:
- * cdef H5T_class_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_member_class(type_id, member_no)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_265);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_265));
-
- /* "h5py/defs.pyx":2372
- * cdef char* H5Tget_member_name(hid_t type_id, unsigned membno) except *:
- * cdef char* r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_member_name(type_id, membno)
- * if r==NULL:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_266);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_266));
-
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- * cdef hid_t H5Tget_member_type(hid_t type_id, unsigned membno) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_member_type(type_id, membno)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_267);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_267));
-
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- * cdef int H5Tget_member_offset(hid_t type_id, int membno) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_member_offset(type_id, membno)
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- __Pyx_GOTREF(__pyx_k_tuple_268);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_268));
-
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- * cdef int H5Tget_member_index(hid_t type_id, char* name) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_269);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_269));
-
- /* "h5py/defs.pyx":2408
- * cdef herr_t H5Tinsert(hid_t parent_id, char *name, size_t offset, hid_t member_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tinsert(parent_id, name, offset, member_id)
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- __Pyx_GOTREF(__pyx_k_tuple_270);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_270));
-
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- * cdef herr_t H5Tpack(hid_t type_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_271);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_271));
-
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- * cdef hid_t H5Tenum_create(hid_t base_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
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- __Pyx_GOTREF(__pyx_k_tuple_272);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_272));
-
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- * cdef herr_t H5Tenum_insert(hid_t type, char *name, void *value) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_273));
-
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- * cdef herr_t H5Tenum_nameof( hid_t type, void *value, char *name, size_t size ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_274);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_274));
-
- /* "h5py/defs.pyx":2453
- * cdef herr_t H5Tenum_valueof( hid_t type, char *name, void *value ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_275));
-
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- * cdef herr_t H5Tget_member_value(hid_t type, unsigned int memb_no, void *value ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- __Pyx_GOTREF(__pyx_k_tuple_276);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_276));
-
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- * cdef hid_t H5Tarray_create(hid_t base_id, int ndims, hsize_t *dims, int *perm) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_277);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_277));
-
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- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
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- */
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- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_278));
-
- /* "h5py/defs.pyx":2489
- * cdef int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_array_dims(type_id, dims, perm)
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- */
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- __Pyx_GOTREF(__pyx_k_tuple_279);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_279));
-
- /* "h5py/defs.pyx":2498
- * cdef herr_t H5Tset_tag(hid_t type_id, char* tag) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
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- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_280);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_280));
-
- /* "h5py/defs.pyx":2507
- * cdef char* H5Tget_tag(hid_t type_id) except *:
- * cdef char* r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tget_tag(type_id)
- * if r==NULL:
- */
- __pyx_k_tuple_281 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_281)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2507; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_281);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_281));
-
- /* "h5py/defs.pyx":2516
- * cdef hid_t H5Tdecode(unsigned char *buf) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tdecode(buf)
- * if r<0:
- */
- __pyx_k_tuple_282 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_282)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2516; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_282);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_282));
-
- /* "h5py/defs.pyx":2525
- * cdef herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tencode(obj_id, buf, nalloc)
- * if r<0:
- */
- __pyx_k_tuple_283 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_283)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2525; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_283);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_283));
-
- /* "h5py/defs.pyx":2534
- * cdef herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tcommit2(loc_id, name, dtype_id, lcpl_id, tcpl_id, tapl_id)
- * if r<0:
- */
- __pyx_k_tuple_284 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_284)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2534; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_284);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_284));
-
- /* "h5py/defs.pyx":2543
- * cdef H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata) except *:
- * cdef H5T_conv_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tfind(src_id, dst_id, pcdata)
- * if r==NULL:
- */
- __pyx_k_tuple_285 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_285)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2543; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_285);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_285));
-
- /* "h5py/defs.pyx":2552
- * cdef herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tregister(pers, name, src_id, dst_id, func)
- * if r<0:
- */
- __pyx_k_tuple_286 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_286)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2552; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_286);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_286));
-
- /* "h5py/defs.pyx":2561
- * cdef herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Tunregister(pers, name, src_id, dst_id, func)
- * if r<0:
- */
- __pyx_k_tuple_287 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_287)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2561; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_287);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_287));
-
- /* "h5py/defs.pyx":2570
- * cdef htri_t H5Zfilter_avail(H5Z_filter_t id_) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Zfilter_avail(id_)
- * if r<0:
- */
- __pyx_k_tuple_288 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_288)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2570; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_288);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_288));
-
- /* "h5py/defs.pyx":2579
- * cdef herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Zget_filter_info(filter_, filter_config_flags)
- * if r<0:
- */
- __pyx_k_tuple_289 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_289)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2579; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_289);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_289));
-
- /* "h5py/defs.pyx":2588
- * cdef hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Acreate(loc_id, name, type_id, space_id, create_plist)
- * if r<0:
- */
- __pyx_k_tuple_290 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_290)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2588; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_290);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_290));
-
- /* "h5py/defs.pyx":2597
- * cdef hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aopen_idx(loc_id, idx)
- * if r<0:
- */
- __pyx_k_tuple_291 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_291)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2597; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_291);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_291));
-
- /* "h5py/defs.pyx":2606
- * cdef hid_t H5Aopen_name(hid_t loc_id, char *name) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aopen_name(loc_id, name)
- * if r<0:
- */
- __pyx_k_tuple_292 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_292)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2606; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_292);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_292));
-
- /* "h5py/defs.pyx":2615
- * cdef herr_t H5Aclose(hid_t attr_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aclose(attr_id)
- * if r<0:
- */
- __pyx_k_tuple_293 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_293)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2615; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_293);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_293));
-
- /* "h5py/defs.pyx":2624
- * cdef herr_t H5Adelete(hid_t loc_id, char *name) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Adelete(loc_id, name)
- * if r<0:
- */
- __pyx_k_tuple_294 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_294)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2624; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_294);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_294));
-
- /* "h5py/defs.pyx":2633
- * cdef herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aread(attr_id, mem_type_id, buf)
- * if r<0:
- */
- __pyx_k_tuple_295 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_295)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2633; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_295);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_295));
-
- /* "h5py/defs.pyx":2642
- * cdef herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf ) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Awrite(attr_id, mem_type_id, buf)
- * if r<0:
- */
- __pyx_k_tuple_296 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_296)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2642; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_296);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_296));
-
- /* "h5py/defs.pyx":2651
- * cdef int H5Aget_num_attrs(hid_t loc_id) except *:
- * cdef int r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aget_num_attrs(loc_id)
- * if r<0:
- */
- __pyx_k_tuple_297 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_297)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2651; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_297);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_297));
-
- /* "h5py/defs.pyx":2660
- * cdef ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf) except *:
- * cdef ssize_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aget_name(attr_id, buf_size, buf)
- * if r<0:
- */
- __pyx_k_tuple_298 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_298)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2660; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_298);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_298));
-
- /* "h5py/defs.pyx":2669
- * cdef hid_t H5Aget_space(hid_t attr_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aget_space(attr_id)
- * if r<0:
- */
- __pyx_k_tuple_299 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_299)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2669; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_299);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_299));
-
- /* "h5py/defs.pyx":2678
- * cdef hid_t H5Aget_type(hid_t attr_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aget_type(attr_id)
- * if r<0:
- */
- __pyx_k_tuple_300 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_300)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2678; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_300);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_300));
-
- /* "h5py/defs.pyx":2687
- * cdef herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aiterate(loc_id, idx, op, op_data)
- * if r<0:
- */
- __pyx_k_tuple_301 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_301)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2687; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_301);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_301));
-
- /* "h5py/defs.pyx":2696
- * cdef herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Adelete_by_name(loc_id, obj_name, attr_name, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_302);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_302));
-
- /* "h5py/defs.pyx":2705
- * cdef herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Adelete_by_idx(loc_id, obj_name, idx_type, order, n, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_303 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_303)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2705; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_303);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_303));
-
- /* "h5py/defs.pyx":2714
- * cdef hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id) except *:
- * cdef hid_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Acreate_by_name(loc_id, obj_name, attr_name, type_id, space_id, acpl_id, aapl_id, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_304 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_304)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2714; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_304);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_304));
-
- /* "h5py/defs.pyx":2723
- * cdef herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aopen(obj_id, attr_name, aapl_id)
- * if r<0:
- */
- __pyx_k_tuple_305 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_305)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2723; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_305);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_305));
-
- /* "h5py/defs.pyx":2732
- * cdef herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aopen_by_name(loc_id, obj_name, attr_name, aapl_id, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_306);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_306));
-
- /* "h5py/defs.pyx":2741
- * cdef herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id)
- * if r<0:
- */
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- __Pyx_GOTREF(__pyx_k_tuple_307);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_307));
-
- /* "h5py/defs.pyx":2750
- * cdef htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aexists_by_name(loc_id, obj_name, attr_name, lapl_id)
- * if r<0:
- */
- __pyx_k_tuple_308 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_308)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2750; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_308);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_308));
-
- /* "h5py/defs.pyx":2759
- * cdef htri_t H5Aexists(hid_t obj_id, char *attr_name) except *:
- * cdef htri_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Aexists(obj_id, attr_name)
- * if r<0:
- */
- __pyx_k_tuple_309 = PyTuple_Pack(3, Py_None, Py_None, Py_None); if (unlikely(!__pyx_k_tuple_309)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 2759; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __Pyx_GOTREF(__pyx_k_tuple_309);
- __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_309));
-
- /* "h5py/defs.pyx":2768
- * cdef herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name) except *:
- * cdef herr_t r
- * with rlock: # <<<<<<<<<<<<<<
- * r = _hdf5.H5Arename(loc_id, old_attr_name, new_attr_name)
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- if (__Pyx_ExportFunction("H5Dextend", (void (*)(void))__pyx_f_4h5py_4defs_H5Dextend, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Dfill", (void (*)(void))__pyx_f_4h5py_4defs_H5Dfill, "herr_t (void *, hid_t, void *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Dvlen_get_buf_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Dvlen_get_buf_size, "herr_t (hid_t, hid_t, hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Dvlen_reclaim", (void (*)(void))__pyx_f_4h5py_4defs_H5Dvlen_reclaim, "herr_t (hid_t, hid_t, hid_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Diterate", (void (*)(void))__pyx_f_4h5py_4defs_H5Diterate, "herr_t (void *, hid_t, hid_t, H5D_operator_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Dset_extent", (void (*)(void))__pyx_f_4h5py_4defs_H5Dset_extent, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fcreate", (void (*)(void))__pyx_f_4h5py_4defs_H5Fcreate, "hid_t (char *, unsigned int, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fopen", (void (*)(void))__pyx_f_4h5py_4defs_H5Fopen, "hid_t (char *, unsigned int, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Fclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fis_hdf5", (void (*)(void))__pyx_f_4h5py_4defs_H5Fis_hdf5, "htri_t (char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fflush", (void (*)(void))__pyx_f_4h5py_4defs_H5Fflush, "herr_t (hid_t, enum H5F_scope_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Freopen", (void (*)(void))__pyx_f_4h5py_4defs_H5Freopen, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fmount", (void (*)(void))__pyx_f_4h5py_4defs_H5Fmount, "herr_t (hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Funmount", (void (*)(void))__pyx_f_4h5py_4defs_H5Funmount, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_filesize", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_filesize, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_create_plist", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_create_plist, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_access_plist", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_access_plist, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_freespace", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_freespace, "hssize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_name, "Py_ssize_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_obj_count", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_obj_count, "int (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_obj_ids", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_obj_ids, "int (hid_t, unsigned int, int, hid_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_vfd_handle", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_vfd_handle, "herr_t (hid_t, hid_t, void **)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_intent", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_intent, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_mdc_config", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_mdc_config, "herr_t (hid_t, H5AC_cache_config_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_mdc_hit_rate", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_mdc_hit_rate, "herr_t (hid_t, double *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fget_mdc_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Fget_mdc_size, "herr_t (hid_t, size_t *, size_t *, size_t *, int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Freset_mdc_hit_rate_stats", (void (*)(void))__pyx_f_4h5py_4defs_H5Freset_mdc_hit_rate_stats, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Fset_mdc_config", (void (*)(void))__pyx_f_4h5py_4defs_H5Fset_mdc_config, "herr_t (hid_t, H5AC_cache_config_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gcreate", (void (*)(void))__pyx_f_4h5py_4defs_H5Gcreate, "hid_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gopen", (void (*)(void))__pyx_f_4h5py_4defs_H5Gopen, "hid_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Gclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Glink2", (void (*)(void))__pyx_f_4h5py_4defs_H5Glink2, "herr_t (hid_t, char *, H5G_link_t, hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gunlink", (void (*)(void))__pyx_f_4h5py_4defs_H5Gunlink, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gmove2", (void (*)(void))__pyx_f_4h5py_4defs_H5Gmove2, "herr_t (hid_t, char *, hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_num_objs", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_num_objs, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_objname_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_objname_by_idx, "int (hid_t, hsize_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_objtype_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_objtype_by_idx, "int (hid_t, hsize_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Giterate", (void (*)(void))__pyx_f_4h5py_4defs_H5Giterate, "herr_t (hid_t, char *, int *, H5G_iterate_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_objinfo", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_objinfo, "herr_t (hid_t, char *, int, H5G_stat_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_linkval", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_linkval, "herr_t (hid_t, char *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gset_comment", (void (*)(void))__pyx_f_4h5py_4defs_H5Gset_comment, "herr_t (hid_t, char *, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_comment", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_comment, "int (hid_t, char *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gcreate_anon", (void (*)(void))__pyx_f_4h5py_4defs_H5Gcreate_anon, "hid_t (hid_t, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gcreate2", (void (*)(void))__pyx_f_4h5py_4defs_H5Gcreate2, "hid_t (hid_t, char *, hid_t, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gopen2", (void (*)(void))__pyx_f_4h5py_4defs_H5Gopen2, "hid_t (hid_t, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_info", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_info, "herr_t (hid_t, H5G_info_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_info_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_info_by_name, "herr_t (hid_t, char *, H5G_info_t *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Gget_create_plist", (void (*)(void))__pyx_f_4h5py_4defs_H5Gget_create_plist, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Iget_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Iget_type, "H5I_type_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Iget_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Iget_name, "Py_ssize_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Iget_file_id", (void (*)(void))__pyx_f_4h5py_4defs_H5Iget_file_id, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Idec_ref", (void (*)(void))__pyx_f_4h5py_4defs_H5Idec_ref, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Iget_ref", (void (*)(void))__pyx_f_4h5py_4defs_H5Iget_ref, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Iinc_ref", (void (*)(void))__pyx_f_4h5py_4defs_H5Iinc_ref, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lmove", (void (*)(void))__pyx_f_4h5py_4defs_H5Lmove, "herr_t (hid_t, char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lcopy", (void (*)(void))__pyx_f_4h5py_4defs_H5Lcopy, "herr_t (hid_t, char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lcreate_hard", (void (*)(void))__pyx_f_4h5py_4defs_H5Lcreate_hard, "herr_t (hid_t, char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lcreate_soft", (void (*)(void))__pyx_f_4h5py_4defs_H5Lcreate_soft, "herr_t (char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Ldelete", (void (*)(void))__pyx_f_4h5py_4defs_H5Ldelete, "herr_t (hid_t, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Ldelete_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Ldelete_by_idx, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lget_val", (void (*)(void))__pyx_f_4h5py_4defs_H5Lget_val, "herr_t (hid_t, char *, void *, size_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lget_val_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Lget_val_by_idx, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, void *, size_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lexists", (void (*)(void))__pyx_f_4h5py_4defs_H5Lexists, "htri_t (hid_t, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lget_info", (void (*)(void))__pyx_f_4h5py_4defs_H5Lget_info, "herr_t (hid_t, char *, H5L_info_t *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lget_info_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Lget_info_by_idx, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, H5L_info_t *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lget_name_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Lget_name_by_idx, "Py_ssize_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, char *, size_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Literate", (void (*)(void))__pyx_f_4h5py_4defs_H5Literate, "herr_t (hid_t, H5_index_t, H5_iter_order_t, hsize_t *, H5L_iterate_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Literate_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Literate_by_name, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t *, H5L_iterate_t, void *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lvisit", (void (*)(void))__pyx_f_4h5py_4defs_H5Lvisit, "herr_t (hid_t, H5_index_t, H5_iter_order_t, H5L_iterate_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lvisit_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Lvisit_by_name, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, H5L_iterate_t, void *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lunpack_elink_val", (void (*)(void))__pyx_f_4h5py_4defs_H5Lunpack_elink_val, "herr_t (void *, size_t, unsigned int *, char **, char **)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Lcreate_external", (void (*)(void))__pyx_f_4h5py_4defs_H5Lcreate_external, "herr_t (char *, char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oopen", (void (*)(void))__pyx_f_4h5py_4defs_H5Oopen, "hid_t (hid_t, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oopen_by_addr", (void (*)(void))__pyx_f_4h5py_4defs_H5Oopen_by_addr, "hid_t (hid_t, haddr_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oopen_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Oopen_by_idx, "hid_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oget_info", (void (*)(void))__pyx_f_4h5py_4defs_H5Oget_info, "herr_t (hid_t, H5O_info_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oget_info_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Oget_info_by_name, "herr_t (hid_t, char *, H5O_info_t *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oget_info_by_idx", (void (*)(void))__pyx_f_4h5py_4defs_H5Oget_info_by_idx, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, hsize_t, H5O_info_t *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Olink", (void (*)(void))__pyx_f_4h5py_4defs_H5Olink, "herr_t (hid_t, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Ocopy", (void (*)(void))__pyx_f_4h5py_4defs_H5Ocopy, "herr_t (hid_t, char *, hid_t, char *, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oincr_refcount", (void (*)(void))__pyx_f_4h5py_4defs_H5Oincr_refcount, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Odecr_refcount", (void (*)(void))__pyx_f_4h5py_4defs_H5Odecr_refcount, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oset_comment", (void (*)(void))__pyx_f_4h5py_4defs_H5Oset_comment, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oset_comment_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Oset_comment_by_name, "herr_t (hid_t, char *, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oget_comment", (void (*)(void))__pyx_f_4h5py_4defs_H5Oget_comment, "Py_ssize_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oget_comment_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Oget_comment_by_name, "Py_ssize_t (hid_t, char *, char *, size_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Ovisit", (void (*)(void))__pyx_f_4h5py_4defs_H5Ovisit, "herr_t (hid_t, H5_index_t, H5_iter_order_t, H5O_iterate_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Ovisit_by_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Ovisit_by_name, "herr_t (hid_t, char *, H5_index_t, H5_iter_order_t, H5O_iterate_t, void *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Oclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Oclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pcreate", (void (*)(void))__pyx_f_4h5py_4defs_H5Pcreate, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pcopy", (void (*)(void))__pyx_f_4h5py_4defs_H5Pcopy, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_class", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_class, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Pclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pequal", (void (*)(void))__pyx_f_4h5py_4defs_H5Pequal, "htri_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pclose_class", (void (*)(void))__pyx_f_4h5py_4defs_H5Pclose_class, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_version", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_version, "herr_t (hid_t, unsigned int *, unsigned int *, unsigned int *, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_userblock", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_userblock, "herr_t (hid_t, hsize_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_userblock", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_userblock, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_sizes", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_sizes, "herr_t (hid_t, size_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_sizes", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_sizes, "herr_t (hid_t, size_t *, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_sym_k", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_sym_k, "herr_t (hid_t, unsigned int, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_sym_k", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_sym_k, "herr_t (hid_t, unsigned int *, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_istore_k", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_istore_k, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_istore_k", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_istore_k, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fclose_degree", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fclose_degree, "herr_t (hid_t, enum H5F_close_degree_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_fclose_degree", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_fclose_degree, "herr_t (hid_t, enum H5F_close_degree_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_core", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_core, "herr_t (hid_t, size_t, hbool_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_fapl_core", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_fapl_core, "herr_t (hid_t, size_t *, hbool_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_family", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_family, "herr_t (hid_t, hsize_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_fapl_family", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_fapl_family, "herr_t (hid_t, hsize_t *, hid_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_family_offset", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_family_offset, "herr_t (hid_t, hsize_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_family_offset", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_family_offset, "herr_t (hid_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_log", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_log, "herr_t (hid_t, char *, unsigned int, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_multi", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_multi, "herr_t (hid_t, H5FD_mem_t *, hid_t *, char **, haddr_t *, hbool_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_cache", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_cache, "herr_t (hid_t, int, int, size_t, double)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_cache", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_cache, "herr_t (hid_t, int *, int *, size_t *, double *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_sec2", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_sec2, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fapl_stdio", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fapl_stdio, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_driver", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_driver, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_mdc_config", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_mdc_config, "herr_t (hid_t, H5AC_cache_config_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_mdc_config", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_mdc_config, "herr_t (hid_t, H5AC_cache_config_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_layout", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_layout, "herr_t (hid_t, int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_layout", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_layout, "H5D_layout_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_chunk", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_chunk, "herr_t (hid_t, int, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_chunk", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_chunk, "int (hid_t, int, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_deflate", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_deflate, "herr_t (hid_t, int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fill_value", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fill_value, "herr_t (hid_t, hid_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_fill_value", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_fill_value, "herr_t (hid_t, hid_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pfill_value_defined", (void (*)(void))__pyx_f_4h5py_4defs_H5Pfill_value_defined, "herr_t (hid_t, H5D_fill_value_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fill_time", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fill_time, "herr_t (hid_t, H5D_fill_time_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_fill_time", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_fill_time, "herr_t (hid_t, H5D_fill_time_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_alloc_time", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_alloc_time, "herr_t (hid_t, H5D_alloc_time_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_alloc_time", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_alloc_time, "herr_t (hid_t, H5D_alloc_time_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_filter", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_filter, "herr_t (hid_t, H5Z_filter_t, unsigned int, size_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pall_filters_avail", (void (*)(void))__pyx_f_4h5py_4defs_H5Pall_filters_avail, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_nfilters", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_nfilters, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_filter", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_filter, "H5Z_filter_t (hid_t, unsigned int, unsigned int *, size_t *, unsigned int *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_filter_by_id", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_filter_by_id, "herr_t (hid_t, H5Z_filter_t, unsigned int *, size_t *, unsigned int *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pmodify_filter", (void (*)(void))__pyx_f_4h5py_4defs_H5Pmodify_filter, "herr_t (hid_t, H5Z_filter_t, unsigned int, size_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Premove_filter", (void (*)(void))__pyx_f_4h5py_4defs_H5Premove_filter, "herr_t (hid_t, H5Z_filter_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_fletcher32", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_fletcher32, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_shuffle", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_shuffle, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_szip", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_szip, "herr_t (hid_t, unsigned int, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_scaleoffset", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_scaleoffset, "herr_t (hid_t, enum H5Z_SO_scale_type_t, int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_edc_check", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_edc_check, "herr_t (hid_t, enum H5Z_EDC_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_edc_check", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_edc_check, "enum H5Z_EDC_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_chunk_cache", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_chunk_cache, "herr_t (hid_t, size_t, size_t, double)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_chunk_cache", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_chunk_cache, "herr_t (hid_t, size_t *, size_t *, double *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_sieve_buf_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_sieve_buf_size, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_sieve_buf_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_sieve_buf_size, "herr_t (hid_t, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_nlinks", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_nlinks, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_nlinks", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_nlinks, "herr_t (hid_t, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_elink_prefix", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_elink_prefix, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_elink_prefix", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_elink_prefix, "Py_ssize_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_elink_fapl", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_elink_fapl, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_elink_fapl", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_elink_fapl, "herr_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_create_intermediate_group", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_create_intermediate_group, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_create_intermediate_group", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_create_intermediate_group, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_copy_object", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_copy_object, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_copy_object", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_copy_object, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_char_encoding", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_char_encoding, "herr_t (hid_t, H5T_cset_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_char_encoding", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_char_encoding, "herr_t (hid_t, H5T_cset_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_obj_track_times", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_obj_track_times, "herr_t (hid_t, hbool_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_obj_track_times", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_obj_track_times, "herr_t (hid_t, hbool_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_local_heap_size_hint", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_local_heap_size_hint, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_local_heap_size_hint", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_local_heap_size_hint, "herr_t (hid_t, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_link_phase_change", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_link_phase_change, "herr_t (hid_t, unsigned int, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_link_phase_change", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_link_phase_change, "herr_t (hid_t, unsigned int *, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_est_link_info", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_est_link_info, "herr_t (hid_t, unsigned int, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_est_link_info", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_est_link_info, "herr_t (hid_t, unsigned int *, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_link_creation_order", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_link_creation_order, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_link_creation_order", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_link_creation_order, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pset_libver_bounds", (void (*)(void))__pyx_f_4h5py_4defs_H5Pset_libver_bounds, "herr_t (hid_t, H5F_libver_t, H5F_libver_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Pget_libver_bounds", (void (*)(void))__pyx_f_4h5py_4defs_H5Pget_libver_bounds, "herr_t (hid_t, H5F_libver_t *, H5F_libver_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Rcreate", (void (*)(void))__pyx_f_4h5py_4defs_H5Rcreate, "herr_t (void *, hid_t, char *, H5R_type_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Rdereference", (void (*)(void))__pyx_f_4h5py_4defs_H5Rdereference, "hid_t (hid_t, H5R_type_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Rget_region", (void (*)(void))__pyx_f_4h5py_4defs_H5Rget_region, "hid_t (hid_t, H5R_type_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Rget_obj_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Rget_obj_type, "enum H5G_obj_t (hid_t, H5R_type_t, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Rget_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Rget_name, "Py_ssize_t (hid_t, H5R_type_t, void *, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Screate", (void (*)(void))__pyx_f_4h5py_4defs_H5Screate, "hid_t (H5S_class_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Scopy", (void (*)(void))__pyx_f_4h5py_4defs_H5Scopy, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Sclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Screate_simple", (void (*)(void))__pyx_f_4h5py_4defs_H5Screate_simple, "hid_t (int, hsize_t *, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sis_simple", (void (*)(void))__pyx_f_4h5py_4defs_H5Sis_simple, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Soffset_simple", (void (*)(void))__pyx_f_4h5py_4defs_H5Soffset_simple, "herr_t (hid_t, hssize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_simple_extent_ndims", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_simple_extent_ndims, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_simple_extent_dims", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_simple_extent_dims, "int (hid_t, hsize_t *, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_simple_extent_npoints", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_simple_extent_npoints, "hssize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_simple_extent_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_simple_extent_type, "H5S_class_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sextent_copy", (void (*)(void))__pyx_f_4h5py_4defs_H5Sextent_copy, "herr_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sset_extent_simple", (void (*)(void))__pyx_f_4h5py_4defs_H5Sset_extent_simple, "herr_t (hid_t, int, hsize_t *, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sset_extent_none", (void (*)(void))__pyx_f_4h5py_4defs_H5Sset_extent_none, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_type, "H5S_sel_type (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_npoints", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_npoints, "hssize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_bounds", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_bounds, "herr_t (hid_t, hsize_t *, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sselect_all", (void (*)(void))__pyx_f_4h5py_4defs_H5Sselect_all, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sselect_none", (void (*)(void))__pyx_f_4h5py_4defs_H5Sselect_none, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sselect_valid", (void (*)(void))__pyx_f_4h5py_4defs_H5Sselect_valid, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_elem_npoints", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_elem_npoints, "hssize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_elem_pointlist", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_elem_pointlist, "herr_t (hid_t, hsize_t, hsize_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sselect_elements", (void (*)(void))__pyx_f_4h5py_4defs_H5Sselect_elements, "herr_t (hid_t, H5S_seloper_t, size_t, hsize_t **)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_hyper_nblocks", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_hyper_nblocks, "hssize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sget_select_hyper_blocklist", (void (*)(void))__pyx_f_4h5py_4defs_H5Sget_select_hyper_blocklist, "herr_t (hid_t, hsize_t, hsize_t, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sselect_hyperslab", (void (*)(void))__pyx_f_4h5py_4defs_H5Sselect_hyperslab, "herr_t (hid_t, H5S_seloper_t, hsize_t *, hsize_t *, hsize_t *, hsize_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sencode", (void (*)(void))__pyx_f_4h5py_4defs_H5Sencode, "herr_t (hid_t, void *, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Sdecode", (void (*)(void))__pyx_f_4h5py_4defs_H5Sdecode, "hid_t (void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tcreate", (void (*)(void))__pyx_f_4h5py_4defs_H5Tcreate, "hid_t (enum H5T_class_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Topen", (void (*)(void))__pyx_f_4h5py_4defs_H5Topen, "hid_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tcommit", (void (*)(void))__pyx_f_4h5py_4defs_H5Tcommit, "herr_t (hid_t, char *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tcommitted", (void (*)(void))__pyx_f_4h5py_4defs_H5Tcommitted, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tcopy", (void (*)(void))__pyx_f_4h5py_4defs_H5Tcopy, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tequal", (void (*)(void))__pyx_f_4h5py_4defs_H5Tequal, "htri_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tlock", (void (*)(void))__pyx_f_4h5py_4defs_H5Tlock, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_class", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_class, "enum H5T_class_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_size, "size_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_super", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_super, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tdetect_class", (void (*)(void))__pyx_f_4h5py_4defs_H5Tdetect_class, "htri_t (hid_t, enum H5T_class_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tclose", (void (*)(void))__pyx_f_4h5py_4defs_H5Tclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_native_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_native_type, "hid_t (hid_t, enum H5T_direction_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tconvert", (void (*)(void))__pyx_f_4h5py_4defs_H5Tconvert, "herr_t (hid_t, hid_t, size_t, void *, void *, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_size", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_size, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_order", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_order, "H5T_order_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_order", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_order, "herr_t (hid_t, H5T_order_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_precision", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_precision, "hsize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_precision", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_precision, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_offset", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_offset, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_offset", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_offset, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_pad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_pad, "herr_t (hid_t, H5T_pad_t *, H5T_pad_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_pad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_pad, "herr_t (hid_t, H5T_pad_t, H5T_pad_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_sign", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_sign, "H5T_sign_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_sign", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_sign, "herr_t (hid_t, H5T_sign_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_fields", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_fields, "herr_t (hid_t, size_t *, size_t *, size_t *, size_t *, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_fields", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_fields, "herr_t (hid_t, size_t, size_t, size_t, size_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_ebias", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_ebias, "size_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_ebias", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_ebias, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_norm", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_norm, "H5T_norm_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_norm", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_norm, "herr_t (hid_t, H5T_norm_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_inpad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_inpad, "H5T_pad_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_inpad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_inpad, "herr_t (hid_t, H5T_pad_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_cset", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_cset, "H5T_cset_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_cset", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_cset, "herr_t (hid_t, H5T_cset_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_strpad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_strpad, "H5T_str_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_strpad", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_strpad, "herr_t (hid_t, H5T_str_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tvlen_create", (void (*)(void))__pyx_f_4h5py_4defs_H5Tvlen_create, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tis_variable_str", (void (*)(void))__pyx_f_4h5py_4defs_H5Tis_variable_str, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_nmembers", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_nmembers, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_class", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_class, "enum H5T_class_t (hid_t, int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_name", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_name, "char *(hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_type", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_type, "hid_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_offset", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_offset, "int (hid_t, int)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_index", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_index, "int (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tinsert", (void (*)(void))__pyx_f_4h5py_4defs_H5Tinsert, "herr_t (hid_t, char *, size_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tpack", (void (*)(void))__pyx_f_4h5py_4defs_H5Tpack, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tenum_create", (void (*)(void))__pyx_f_4h5py_4defs_H5Tenum_create, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tenum_insert", (void (*)(void))__pyx_f_4h5py_4defs_H5Tenum_insert, "herr_t (hid_t, char *, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tenum_nameof", (void (*)(void))__pyx_f_4h5py_4defs_H5Tenum_nameof, "herr_t (hid_t, void *, char *, size_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tenum_valueof", (void (*)(void))__pyx_f_4h5py_4defs_H5Tenum_valueof, "herr_t (hid_t, char *, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_member_value", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_member_value, "herr_t (hid_t, unsigned int, void *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tarray_create", (void (*)(void))__pyx_f_4h5py_4defs_H5Tarray_create, "hid_t (hid_t, int, hsize_t *, int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_array_ndims", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_array_ndims, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_array_dims", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_array_dims, "int (hid_t, hsize_t *, int *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tset_tag", (void (*)(void))__pyx_f_4h5py_4defs_H5Tset_tag, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tget_tag", (void (*)(void))__pyx_f_4h5py_4defs_H5Tget_tag, "char *(hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tdecode", (void (*)(void))__pyx_f_4h5py_4defs_H5Tdecode, "hid_t (unsigned char *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tencode", (void (*)(void))__pyx_f_4h5py_4defs_H5Tencode, "herr_t (hid_t, unsigned char *, size_t *)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tcommit2", (void (*)(void))__pyx_f_4h5py_4defs_H5Tcommit2, "herr_t (hid_t, char *, hid_t, hid_t, hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tfind", (void (*)(void))__pyx_f_4h5py_4defs_H5Tfind, "H5T_conv_t (hid_t, hid_t, H5T_cdata_t **)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tregister", (void (*)(void))__pyx_f_4h5py_4defs_H5Tregister, "herr_t (H5T_pers_t, char *, hid_t, hid_t, H5T_conv_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Tunregister", (void (*)(void))__pyx_f_4h5py_4defs_H5Tunregister, "herr_t (H5T_pers_t, char *, hid_t, hid_t, H5T_conv_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ExportFunction("H5Zfilter_avail", (void (*)(void))__pyx_f_4h5py_4defs_H5Zfilter_avail, "htri_t (H5Z_filter_t)") < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/defs.pxd b/h5py/defs.pxd
deleted file mode 100644
index 92f25bc..0000000
--- a/h5py/defs.pxd
+++ /dev/null
@@ -1,338 +0,0 @@
-include "config.pxi"
-
-from api_types_hdf5 cimport *
-from api_types_ext cimport *
-
-cdef herr_t H5open() except *
-cdef herr_t H5close() except *
-cdef herr_t H5get_libversion(unsigned *majnum, unsigned *minnum, unsigned *relnum) except *
-cdef hid_t H5Dcreate2(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id) except *
-cdef hid_t H5Dcreate_anon(hid_t file_id, hid_t type_id, hid_t space_id, hid_t plist_id, hid_t dapl_id) except *
-cdef hid_t H5Dopen(hid_t file_id, char *name) except *
-cdef herr_t H5Dclose(hid_t dset_id) except *
-cdef hid_t H5Dget_space(hid_t dset_id) except *
-cdef herr_t H5Dget_space_status(hid_t dset_id, H5D_space_status_t *status) except *
-cdef hid_t H5Dget_type(hid_t dset_id) except *
-cdef hid_t H5Dget_create_plist(hid_t dataset_id) except *
-cdef haddr_t H5Dget_offset(hid_t dset_id) except *
-cdef hsize_t H5Dget_storage_size(hid_t dset_id) except *
-cdef herr_t H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t plist_id, void *buf) except *
-cdef herr_t H5Dwrite(hid_t dset_id, hid_t mem_type, hid_t mem_space, hid_t file_space, hid_t xfer_plist, void* buf) except *
-cdef herr_t H5Dextend(hid_t dataset_id, hsize_t *size) except *
-cdef herr_t H5Dfill(void *fill, hid_t fill_type_id, void *buf, hid_t buf_type_id, hid_t space_id ) except *
-cdef herr_t H5Dvlen_get_buf_size(hid_t dset_id, hid_t type_id, hid_t space_id, hsize_t *size) except *
-cdef herr_t H5Dvlen_reclaim(hid_t type_id, hid_t space_id, hid_t plist, void *buf) except *
-cdef herr_t H5Diterate(void *buf, hid_t type_id, hid_t space_id, H5D_operator_t op, void* operator_data) except *
-cdef herr_t H5Dset_extent(hid_t dset_id, hsize_t* size) except *
-cdef hid_t H5Fcreate(char *filename, unsigned int flags, hid_t create_plist, hid_t access_plist) except *
-cdef hid_t H5Fopen(char *name, unsigned flags, hid_t access_id) except *
-cdef herr_t H5Fclose(hid_t file_id) except *
-cdef htri_t H5Fis_hdf5(char *name) except *
-cdef herr_t H5Fflush(hid_t object_id, H5F_scope_t scope) except *
-cdef hid_t H5Freopen(hid_t file_id) except *
-cdef herr_t H5Fmount(hid_t loc_id, char *name, hid_t child_id, hid_t plist_id) except *
-cdef herr_t H5Funmount(hid_t loc_id, char *name) except *
-cdef herr_t H5Fget_filesize(hid_t file_id, hsize_t *size) except *
-cdef hid_t H5Fget_create_plist(hid_t file_id ) except *
-cdef hid_t H5Fget_access_plist(hid_t file_id) except *
-cdef hssize_t H5Fget_freespace(hid_t file_id) except *
-cdef ssize_t H5Fget_name(hid_t obj_id, char *name, size_t size) except *
-cdef int H5Fget_obj_count(hid_t file_id, unsigned int types) except *
-cdef int H5Fget_obj_ids(hid_t file_id, unsigned int types, int max_objs, hid_t *obj_id_list) except *
-cdef herr_t H5Fget_vfd_handle(hid_t file_id, hid_t fapl_id, void **file_handle) except *
-cdef herr_t H5Fget_intent(hid_t file_id, unsigned int *intent) except *
-cdef herr_t H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) except *
-cdef herr_t H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr) except *
-cdef herr_t H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, size_t *cur_size_ptr, int *cur_num_entries_ptr) except *
-cdef herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id) except *
-cdef herr_t H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) except *
-cdef hid_t H5Gcreate(hid_t loc_id, char *name, size_t size_hint) except *
-cdef hid_t H5Gopen(hid_t loc_id, char *name) except *
-cdef herr_t H5Gclose(hid_t group_id) except *
-cdef herr_t H5Glink2( hid_t curr_loc_id, char *current_name, H5G_link_t link_type, hid_t new_loc_id, char *new_name) except *
-cdef herr_t H5Gunlink(hid_t file_id, char *name) except *
-cdef herr_t H5Gmove2(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name) except *
-cdef herr_t H5Gget_num_objs(hid_t loc_id, hsize_t* num_obj) except *
-cdef int H5Gget_objname_by_idx(hid_t loc_id, hsize_t idx, char *name, size_t size) except *
-cdef int H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx) except *
-cdef herr_t H5Giterate(hid_t loc_id, char *name, int *idx, H5G_iterate_t op, void* data) except *
-cdef herr_t H5Gget_objinfo(hid_t loc_id, char* name, int follow_link, H5G_stat_t *statbuf) except *
-cdef herr_t H5Gget_linkval(hid_t loc_id, char *name, size_t size, char *value) except *
-cdef herr_t H5Gset_comment(hid_t loc_id, char *name, char *comment) except *
-cdef int H5Gget_comment(hid_t loc_id, char *name, size_t bufsize, char *comment) except *
-cdef hid_t H5Gcreate_anon( hid_t loc_id, hid_t gcpl_id, hid_t gapl_id) except *
-cdef hid_t H5Gcreate2(hid_t loc_id, char *name, hid_t lcpl_id, hid_t gcpl_id, hid_t gapl_id) except *
-cdef hid_t H5Gopen2( hid_t loc_id, char * name, hid_t gapl_id) except *
-cdef herr_t H5Gget_info( hid_t group_id, H5G_info_t *group_info) except *
-cdef herr_t H5Gget_info_by_name( hid_t loc_id, char *group_name, H5G_info_t *group_info, hid_t lapl_id) except *
-cdef hid_t H5Gget_create_plist(hid_t group_id) except *
-cdef H5I_type_t H5Iget_type(hid_t obj_id) except *
-cdef ssize_t H5Iget_name( hid_t obj_id, char *name, size_t size) except *
-cdef hid_t H5Iget_file_id(hid_t obj_id) except *
-cdef int H5Idec_ref(hid_t obj_id) except *
-cdef int H5Iget_ref(hid_t obj_id) except *
-cdef int H5Iinc_ref(hid_t obj_id) except *
-cdef herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef herr_t H5Lcreate_soft(char *link_target, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef herr_t H5Ldelete(hid_t loc_id, char *name, hid_t lapl_id) except *
-cdef herr_t H5Ldelete_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *
-cdef herr_t H5Lget_val(hid_t loc_id, char *name, void *bufout, size_t size, hid_t lapl_id) except *
-cdef herr_t H5Lget_val_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, void *bufout, size_t size, hid_t lapl_id) except *
-cdef htri_t H5Lexists(hid_t loc_id, char *name, hid_t lapl_id) except *
-cdef herr_t H5Lget_info(hid_t loc_id, char *name, H5L_info_t *linfo, hid_t lapl_id) except *
-cdef herr_t H5Lget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5L_info_t *linfo, hid_t lapl_id) except *
-cdef ssize_t H5Lget_name_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, char *name, size_t size, hid_t lapl_id) except *
-cdef herr_t H5Literate(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data) except *
-cdef herr_t H5Literate_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *
-cdef herr_t H5Lvisit(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data) except *
-cdef herr_t H5Lvisit_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *
-cdef herr_t H5Lunpack_elink_val(void *ext_linkval, size_t link_size, unsigned *flags, char **filename, char **obj_path) except *
-cdef herr_t H5Lcreate_external(char *file_name, char *obj_name, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef hid_t H5Oopen(hid_t loc_id, char *name, hid_t lapl_id) except *
-cdef hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr) except *
-cdef hid_t H5Oopen_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *
-cdef herr_t H5Oget_info(hid_t loc_id, H5O_info_t *oinfo) except *
-cdef herr_t H5Oget_info_by_name(hid_t loc_id, char *name, H5O_info_t *oinfo, hid_t lapl_id) except *
-cdef herr_t H5Oget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5O_info_t *oinfo, hid_t lapl_id) except *
-cdef herr_t H5Olink(hid_t obj_id, hid_t new_loc_id, char *new_name, hid_t lcpl_id, hid_t lapl_id) except *
-cdef herr_t H5Ocopy(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name, hid_t ocpypl_id, hid_t lcpl_id) except *
-cdef herr_t H5Oincr_refcount(hid_t object_id) except *
-cdef herr_t H5Odecr_refcount(hid_t object_id) except *
-cdef herr_t H5Oset_comment(hid_t obj_id, char *comment) except *
-cdef herr_t H5Oset_comment_by_name(hid_t loc_id, char *name, char *comment, hid_t lapl_id) except *
-cdef ssize_t H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize) except *
-cdef ssize_t H5Oget_comment_by_name(hid_t loc_id, char *name, char *comment, size_t bufsize, hid_t lapl_id) except *
-cdef herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data) except *
-cdef herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id) except *
-cdef herr_t H5Oclose(hid_t object_id) except *
-cdef hid_t H5Pcreate(hid_t plist_id) except *
-cdef hid_t H5Pcopy(hid_t plist_id) except *
-cdef int H5Pget_class(hid_t plist_id) except *
-cdef herr_t H5Pclose(hid_t plist_id) except *
-cdef htri_t H5Pequal( hid_t id1, hid_t id2 ) except *
-cdef herr_t H5Pclose_class(hid_t id) except *
-cdef herr_t H5Pget_version(hid_t plist, unsigned int *super_, unsigned int* freelist, unsigned int *stab, unsigned int *shhdr) except *
-cdef herr_t H5Pset_userblock(hid_t plist, hsize_t size) except *
-cdef herr_t H5Pget_userblock(hid_t plist, hsize_t * size) except *
-cdef herr_t H5Pset_sizes(hid_t plist, size_t sizeof_addr, size_t sizeof_size) except *
-cdef herr_t H5Pget_sizes(hid_t plist, size_t *sizeof_addr, size_t *sizeof_size) except *
-cdef herr_t H5Pset_sym_k(hid_t plist, unsigned int ik, unsigned int lk) except *
-cdef herr_t H5Pget_sym_k(hid_t plist, unsigned int *ik, unsigned int *lk) except *
-cdef herr_t H5Pset_istore_k(hid_t plist, unsigned int ik) except *
-cdef herr_t H5Pget_istore_k(hid_t plist, unsigned int *ik) except *
-cdef herr_t H5Pset_fclose_degree(hid_t fapl_id, H5F_close_degree_t fc_degree) except *
-cdef herr_t H5Pget_fclose_degree(hid_t fapl_id, H5F_close_degree_t *fc_degree) except *
-cdef herr_t H5Pset_fapl_core( hid_t fapl_id, size_t increment, hbool_t backing_store) except *
-cdef herr_t H5Pget_fapl_core( hid_t fapl_id, size_t *increment, hbool_t *backing_store) except *
-cdef herr_t H5Pset_fapl_family( hid_t fapl_id, hsize_t memb_size, hid_t memb_fapl_id ) except *
-cdef herr_t H5Pget_fapl_family( hid_t fapl_id, hsize_t *memb_size, hid_t *memb_fapl_id ) except *
-cdef herr_t H5Pset_family_offset( hid_t fapl_id, hsize_t offset) except *
-cdef herr_t H5Pget_family_offset( hid_t fapl_id, hsize_t *offset) except *
-cdef herr_t H5Pset_fapl_log(hid_t fapl_id, char *logfile, unsigned int flags, size_t buf_size) except *
-cdef herr_t H5Pset_fapl_multi(hid_t fapl_id, H5FD_mem_t *memb_map, hid_t *memb_fapl, char **memb_name, haddr_t *memb_addr, hbool_t relax) except *
-cdef herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, int rdcc_nelmts, size_t rdcc_nbytes, double rdcc_w0) except *
-cdef herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, int *rdcc_nelmts, size_t *rdcc_nbytes, double *rdcc_w0) except *
-cdef herr_t H5Pset_fapl_sec2(hid_t fapl_id) except *
-cdef herr_t H5Pset_fapl_stdio(hid_t fapl_id) except *
-cdef hid_t H5Pget_driver(hid_t fapl_id) except *
-cdef herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *
-cdef herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *
-cdef herr_t H5Pset_layout(hid_t plist, int layout) except *
-cdef H5D_layout_t H5Pget_layout(hid_t plist) except *
-cdef herr_t H5Pset_chunk(hid_t plist, int ndims, hsize_t * dim) except *
-cdef int H5Pget_chunk(hid_t plist, int max_ndims, hsize_t * dims ) except *
-cdef herr_t H5Pset_deflate( hid_t plist, int level) except *
-cdef herr_t H5Pset_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *
-cdef herr_t H5Pget_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *
-cdef herr_t H5Pfill_value_defined(hid_t plist_id, H5D_fill_value_t *status ) except *
-cdef herr_t H5Pset_fill_time(hid_t plist_id, H5D_fill_time_t fill_time ) except *
-cdef herr_t H5Pget_fill_time(hid_t plist_id, H5D_fill_time_t *fill_time ) except *
-cdef herr_t H5Pset_alloc_time(hid_t plist_id, H5D_alloc_time_t alloc_time ) except *
-cdef herr_t H5Pget_alloc_time(hid_t plist_id, H5D_alloc_time_t *alloc_time ) except *
-cdef herr_t H5Pset_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int* cd_values ) except *
-cdef htri_t H5Pall_filters_avail(hid_t dcpl_id) except *
-cdef int H5Pget_nfilters(hid_t plist) except *
-cdef H5Z_filter_t H5Pget_filter(hid_t plist, unsigned int filter_number, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name ) except *
-cdef herr_t H5Pget_filter_by_id( hid_t plist_id, H5Z_filter_t filter, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name) except *
-cdef herr_t H5Pmodify_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int *cd_values) except *
-cdef herr_t H5Premove_filter(hid_t plist, H5Z_filter_t filter ) except *
-cdef herr_t H5Pset_fletcher32(hid_t plist) except *
-cdef herr_t H5Pset_shuffle(hid_t plist_id) except *
-cdef herr_t H5Pset_szip(hid_t plist, unsigned int options_mask, unsigned int pixels_per_block) except *
-cdef herr_t H5Pset_scaleoffset(hid_t plist, H5Z_SO_scale_type_t scale_type, int scale_factor) except *
-cdef herr_t H5Pset_edc_check(hid_t plist, H5Z_EDC_t check) except *
-cdef H5Z_EDC_t H5Pget_edc_check(hid_t plist) except *
-cdef herr_t H5Pset_chunk_cache( hid_t dapl_id, size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0 ) except *
-cdef herr_t H5Pget_chunk_cache( hid_t dapl_id, size_t *rdcc_nslots, size_t *rdcc_nbytes, double *rdcc_w0 ) except *
-cdef herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size) except *
-cdef herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size) except *
-cdef herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks) except *
-cdef herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks) except *
-cdef herr_t H5Pset_elink_prefix(hid_t plist_id, char *prefix) except *
-cdef ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size) except *
-cdef hid_t H5Pget_elink_fapl(hid_t lapl_id) except *
-cdef herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id) except *
-cdef herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd) except *
-cdef herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd) except *
-cdef herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd) except *
-cdef herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd) except *
-cdef herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding) except *
-cdef herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding) except *
-cdef herr_t H5Pset_obj_track_times( hid_t ocpl_id, hbool_t track_times ) except *
-cdef herr_t H5Pget_obj_track_times( hid_t ocpl_id, hbool_t *track_times ) except *
-cdef herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint) except *
-cdef herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint) except *
-cdef herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense) except *
-cdef herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact , unsigned *min_dense) except *
-cdef herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len) except *
-cdef herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries , unsigned *est_name_len) except *
-cdef herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags) except *
-cdef herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags) except *
-cdef herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high) except *
-cdef herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high) except *
-cdef herr_t H5Rcreate(void *ref, hid_t loc_id, char *name, H5R_type_t ref_type, hid_t space_id) except *
-cdef hid_t H5Rdereference(hid_t obj_id, H5R_type_t ref_type, void *ref) except *
-cdef hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, void *ref) except *
-cdef H5G_obj_t H5Rget_obj_type(hid_t id, H5R_type_t ref_type, void *ref) except *
-cdef ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, void *ref, char *name, size_t size) except *
-cdef hid_t H5Screate(H5S_class_t type) except *
-cdef hid_t H5Scopy(hid_t space_id ) except *
-cdef herr_t H5Sclose(hid_t space_id) except *
-cdef hid_t H5Screate_simple(int rank, hsize_t *dims, hsize_t *maxdims) except *
-cdef htri_t H5Sis_simple(hid_t space_id) except *
-cdef herr_t H5Soffset_simple(hid_t space_id, hssize_t *offset ) except *
-cdef int H5Sget_simple_extent_ndims(hid_t space_id) except *
-cdef int H5Sget_simple_extent_dims(hid_t space_id, hsize_t *dims, hsize_t *maxdims) except *
-cdef hssize_t H5Sget_simple_extent_npoints(hid_t space_id) except *
-cdef H5S_class_t H5Sget_simple_extent_type(hid_t space_id) except *
-cdef herr_t H5Sextent_copy(hid_t dest_space_id, hid_t source_space_id ) except *
-cdef herr_t H5Sset_extent_simple(hid_t space_id, int rank, hsize_t *current_size, hsize_t *maximum_size ) except *
-cdef herr_t H5Sset_extent_none(hid_t space_id) except *
-cdef H5S_sel_type H5Sget_select_type(hid_t space_id) except *
-cdef hssize_t H5Sget_select_npoints(hid_t space_id) except *
-cdef herr_t H5Sget_select_bounds(hid_t space_id, hsize_t *start, hsize_t *end) except *
-cdef herr_t H5Sselect_all(hid_t space_id) except *
-cdef herr_t H5Sselect_none(hid_t space_id) except *
-cdef htri_t H5Sselect_valid(hid_t space_id) except *
-cdef hssize_t H5Sget_select_elem_npoints(hid_t space_id) except *
-cdef herr_t H5Sget_select_elem_pointlist(hid_t space_id, hsize_t startpoint, hsize_t numpoints, hsize_t *buf) except *
-cdef herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, size_t num_elements, hsize_t **coord) except *
-cdef hssize_t H5Sget_select_hyper_nblocks(hid_t space_id ) except *
-cdef herr_t H5Sget_select_hyper_blocklist(hid_t space_id, hsize_t startblock, hsize_t numblocks, hsize_t *buf ) except *
-cdef herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, hsize_t *start, hsize_t *_stride, hsize_t *count, hsize_t *_block) except *
-cdef herr_t H5Sencode(hid_t obj_id, void *buf, size_t *nalloc) except *
-cdef hid_t H5Sdecode(void *buf) except *
-cdef hid_t H5Tcreate(H5T_class_t type, size_t size) except *
-cdef hid_t H5Topen(hid_t loc, char* name) except *
-cdef herr_t H5Tcommit(hid_t loc_id, char* name, hid_t type) except *
-cdef htri_t H5Tcommitted(hid_t type) except *
-cdef hid_t H5Tcopy(hid_t type_id) except *
-cdef htri_t H5Tequal(hid_t type_id1, hid_t type_id2 ) except *
-cdef herr_t H5Tlock(hid_t type_id) except *
-cdef H5T_class_t H5Tget_class(hid_t type_id) except *
-cdef size_t H5Tget_size(hid_t type_id) except *
-cdef hid_t H5Tget_super(hid_t type) except *
-cdef htri_t H5Tdetect_class(hid_t type_id, H5T_class_t dtype_class) except *
-cdef herr_t H5Tclose(hid_t type_id) except *
-cdef hid_t H5Tget_native_type(hid_t type_id, H5T_direction_t direction) except *
-cdef herr_t H5Tconvert(hid_t src_id, hid_t dst_id, size_t nelmts, void *buf, void *background, hid_t plist_id) except *
-cdef herr_t H5Tset_size(hid_t type_id, size_t size) except *
-cdef H5T_order_t H5Tget_order(hid_t type_id) except *
-cdef herr_t H5Tset_order(hid_t type_id, H5T_order_t order) except *
-cdef hsize_t H5Tget_precision(hid_t type_id) except *
-cdef herr_t H5Tset_precision(hid_t type_id, size_t prec) except *
-cdef int H5Tget_offset(hid_t type_id) except *
-cdef herr_t H5Tset_offset(hid_t type_id, size_t offset) except *
-cdef herr_t H5Tget_pad(hid_t type_id, H5T_pad_t * lsb, H5T_pad_t * msb ) except *
-cdef herr_t H5Tset_pad(hid_t type_id, H5T_pad_t lsb, H5T_pad_t msb ) except *
-cdef H5T_sign_t H5Tget_sign(hid_t type_id) except *
-cdef herr_t H5Tset_sign(hid_t type_id, H5T_sign_t sign) except *
-cdef herr_t H5Tget_fields(hid_t type_id, size_t *spos, size_t *epos, size_t *esize, size_t *mpos, size_t *msize ) except *
-cdef herr_t H5Tset_fields(hid_t type_id, size_t spos, size_t epos, size_t esize, size_t mpos, size_t msize ) except *
-cdef size_t H5Tget_ebias(hid_t type_id) except *
-cdef herr_t H5Tset_ebias(hid_t type_id, size_t ebias) except *
-cdef H5T_norm_t H5Tget_norm(hid_t type_id) except *
-cdef herr_t H5Tset_norm(hid_t type_id, H5T_norm_t norm) except *
-cdef H5T_pad_t H5Tget_inpad(hid_t type_id) except *
-cdef herr_t H5Tset_inpad(hid_t type_id, H5T_pad_t inpad) except *
-cdef H5T_cset_t H5Tget_cset(hid_t type_id) except *
-cdef herr_t H5Tset_cset(hid_t type_id, H5T_cset_t cset) except *
-cdef H5T_str_t H5Tget_strpad(hid_t type_id) except *
-cdef herr_t H5Tset_strpad(hid_t type_id, H5T_str_t strpad) except *
-cdef hid_t H5Tvlen_create(hid_t base_type_id) except *
-cdef htri_t H5Tis_variable_str(hid_t dtype_id) except *
-cdef int H5Tget_nmembers(hid_t type_id) except *
-cdef H5T_class_t H5Tget_member_class(hid_t type_id, int member_no) except *
-cdef char* H5Tget_member_name(hid_t type_id, unsigned membno) except *
-cdef hid_t H5Tget_member_type(hid_t type_id, unsigned membno) except *
-cdef int H5Tget_member_offset(hid_t type_id, int membno) except *
-cdef int H5Tget_member_index(hid_t type_id, char* name) except *
-cdef herr_t H5Tinsert(hid_t parent_id, char *name, size_t offset, hid_t member_id) except *
-cdef herr_t H5Tpack(hid_t type_id) except *
-cdef hid_t H5Tenum_create(hid_t base_id) except *
-cdef herr_t H5Tenum_insert(hid_t type, char *name, void *value) except *
-cdef herr_t H5Tenum_nameof( hid_t type, void *value, char *name, size_t size ) except *
-cdef herr_t H5Tenum_valueof( hid_t type, char *name, void *value ) except *
-cdef herr_t H5Tget_member_value(hid_t type, unsigned int memb_no, void *value ) except *
-cdef hid_t H5Tarray_create(hid_t base_id, int ndims, hsize_t *dims, int *perm) except *
-cdef int H5Tget_array_ndims(hid_t type_id) except *
-cdef int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm) except *
-cdef herr_t H5Tset_tag(hid_t type_id, char* tag) except *
-cdef char* H5Tget_tag(hid_t type_id) except *
-cdef hid_t H5Tdecode(unsigned char *buf) except *
-cdef herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc) except *
-cdef herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id) except *
-cdef H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata) except *
-cdef herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
-cdef herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *
-cdef htri_t H5Zfilter_avail(H5Z_filter_t id_) except *
-cdef herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags) except *
-cdef hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist) except *
-cdef hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx) except *
-cdef hid_t H5Aopen_name(hid_t loc_id, char *name) except *
-cdef herr_t H5Aclose(hid_t attr_id) except *
-cdef herr_t H5Adelete(hid_t loc_id, char *name) except *
-cdef herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf) except *
-cdef herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf ) except *
-cdef int H5Aget_num_attrs(hid_t loc_id) except *
-cdef ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf) except *
-cdef hid_t H5Aget_space(hid_t attr_id) except *
-cdef hid_t H5Aget_type(hid_t attr_id) except *
-cdef herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data) except *
-cdef herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
-cdef herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *
-cdef hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id) except *
-cdef herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id) except *
-cdef herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id) except *
-cdef herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id) except *
-cdef htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *
-cdef htri_t H5Aexists(hid_t obj_id, char *attr_name) except *
-cdef herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name) except *
-cdef herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id) except *
-cdef herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo) except *
-cdef herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id) except *
-cdef herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id) except *
-cdef herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data) except *
-cdef hsize_t H5Aget_storage_size(hid_t attr_id) except *
-IF MPI:
- cdef herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info) except *
-IF MPI:
- cdef herr_t H5Pset_fapl_mpiposix(hid_t fapl_id, MPI_Comm comm, hbool_t hints) except *
-IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- cdef herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag) except *
-IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- cdef herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag) except *
-cdef herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) except *
-cdef herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) except *
-cdef herr_t H5DSset_scale(hid_t dsid, char *dimname) except *
-cdef int H5DSget_num_scales(hid_t did, unsigned int dim) except *
-cdef herr_t H5DSset_label(hid_t did, unsigned int idx, char *label) except *
-cdef ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) except *
-cdef ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size) except *
-cdef htri_t H5DSis_scale(hid_t did) except *
-cdef herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, void *visitor_data) except *
-cdef htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) except *
diff --git a/h5py/defs.pyx b/h5py/defs.pyx
deleted file mode 100644
index d58d1cf..0000000
--- a/h5py/defs.pyx
+++ /dev/null
@@ -1,2960 +0,0 @@
-include "config.pxi"
-from api_types_ext cimport *
-from api_types_hdf5 cimport *
-
-cimport _hdf5
-
-from _errors cimport set_exception
-
-include "_locks.pxi"
-
-rlock = FastRLock()
-cdef herr_t H5open() except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5open()
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5close() except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5close()
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5get_libversion(unsigned *majnum, unsigned *minnum, unsigned *relnum) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5get_libversion(majnum, minnum, relnum)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Dcreate2(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dcreate2(loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Dcreate_anon(hid_t file_id, hid_t type_id, hid_t space_id, hid_t plist_id, hid_t dapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dcreate_anon(file_id, type_id, space_id, plist_id, dapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Dopen(hid_t file_id, char *name) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dopen(file_id, name)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Dclose(hid_t dset_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dclose(dset_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Dget_space(hid_t dset_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dget_space(dset_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Dget_space_status(hid_t dset_id, H5D_space_status_t *status) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dget_space_status(dset_id, status)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Dget_type(hid_t dset_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dget_type(dset_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Dget_create_plist(hid_t dataset_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Dget_create_plist(dataset_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef haddr_t H5Dget_offset(hid_t dset_id) except *:
- cdef haddr_t r
- with rlock:
- r = _hdf5.H5Dget_offset(dset_id)
- if r==0:
- if set_exception():
- return <haddr_t>0;
- return r
-
-cdef hsize_t H5Dget_storage_size(hid_t dset_id) except *:
- cdef hsize_t r
- with rlock:
- r = _hdf5.H5Dget_storage_size(dset_id)
- if r==0:
- if set_exception():
- return <hsize_t>0;
- return r
-
-cdef herr_t H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t plist_id, void *buf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dread(dset_id, mem_type_id, mem_space_id, file_space_id, plist_id, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dwrite(hid_t dset_id, hid_t mem_type, hid_t mem_space, hid_t file_space, hid_t xfer_plist, void* buf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dwrite(dset_id, mem_type, mem_space, file_space, xfer_plist, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dextend(hid_t dataset_id, hsize_t *size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dextend(dataset_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dfill(void *fill, hid_t fill_type_id, void *buf, hid_t buf_type_id, hid_t space_id ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dfill(fill, fill_type_id, buf, buf_type_id, space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dvlen_get_buf_size(hid_t dset_id, hid_t type_id, hid_t space_id, hsize_t *size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dvlen_get_buf_size(dset_id, type_id, space_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dvlen_reclaim(hid_t type_id, hid_t space_id, hid_t plist, void *buf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dvlen_reclaim(type_id, space_id, plist, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Diterate(void *buf, hid_t type_id, hid_t space_id, H5D_operator_t op, void* operator_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Diterate(buf, type_id, space_id, op, operator_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Dset_extent(hid_t dset_id, hsize_t* size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Dset_extent(dset_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Fcreate(char *filename, unsigned int flags, hid_t create_plist, hid_t access_plist) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Fcreate(filename, flags, create_plist, access_plist)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Fopen(char *name, unsigned flags, hid_t access_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Fopen(name, flags, access_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Fclose(hid_t file_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fclose(file_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Fis_hdf5(char *name) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Fis_hdf5(name)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Fflush(hid_t object_id, H5F_scope_t scope) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fflush(object_id, scope)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Freopen(hid_t file_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Freopen(file_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Fmount(hid_t loc_id, char *name, hid_t child_id, hid_t plist_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fmount(loc_id, name, child_id, plist_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Funmount(hid_t loc_id, char *name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Funmount(loc_id, name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fget_filesize(hid_t file_id, hsize_t *size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_filesize(file_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Fget_create_plist(hid_t file_id ) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Fget_create_plist(file_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Fget_access_plist(hid_t file_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Fget_access_plist(file_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hssize_t H5Fget_freespace(hid_t file_id) except *:
- cdef hssize_t r
- with rlock:
- r = _hdf5.H5Fget_freespace(file_id)
- if r<0:
- if set_exception():
- return <hssize_t>-1;
- return r
-
-cdef ssize_t H5Fget_name(hid_t obj_id, char *name, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Fget_name(obj_id, name, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef int H5Fget_obj_count(hid_t file_id, unsigned int types) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Fget_obj_count(file_id, types)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Fget_obj_ids(hid_t file_id, unsigned int types, int max_objs, hid_t *obj_id_list) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Fget_obj_ids(file_id, types, max_objs, obj_id_list)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Fget_vfd_handle(hid_t file_id, hid_t fapl_id, void **file_handle) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_vfd_handle(file_id, fapl_id, file_handle)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fget_intent(hid_t file_id, unsigned int *intent) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_intent(file_id, intent)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_mdc_config(file_id, config_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_mdc_hit_rate(file_id, hit_rate_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, size_t *cur_size_ptr, int *cur_num_entries_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_mdc_size(file_id, max_size_ptr, min_clean_size_ptr, cur_size_ptr, cur_num_entries_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Freset_mdc_hit_rate_stats(file_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fset_mdc_config(file_id, config_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Gcreate(hid_t loc_id, char *name, size_t size_hint) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gcreate(loc_id, name, size_hint)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Gopen(hid_t loc_id, char *name) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gopen(loc_id, name)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Gclose(hid_t group_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gclose(group_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Glink2( hid_t curr_loc_id, char *current_name, H5G_link_t link_type, hid_t new_loc_id, char *new_name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Glink2(curr_loc_id, current_name, link_type, new_loc_id, new_name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gunlink(hid_t file_id, char *name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gunlink(file_id, name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gmove2(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gmove2(src_loc_id, src_name, dst_loc_id, dst_name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gget_num_objs(hid_t loc_id, hsize_t* num_obj) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gget_num_objs(loc_id, num_obj)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Gget_objname_by_idx(hid_t loc_id, hsize_t idx, char *name, size_t size) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Gget_objname_by_idx(loc_id, idx, name, size)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Gget_objtype_by_idx(loc_id, idx)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Giterate(hid_t loc_id, char *name, int *idx, H5G_iterate_t op, void* data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Giterate(loc_id, name, idx, op, data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gget_objinfo(hid_t loc_id, char* name, int follow_link, H5G_stat_t *statbuf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gget_objinfo(loc_id, name, follow_link, statbuf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gget_linkval(hid_t loc_id, char *name, size_t size, char *value) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gget_linkval(loc_id, name, size, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gset_comment(hid_t loc_id, char *name, char *comment) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gset_comment(loc_id, name, comment)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Gget_comment(hid_t loc_id, char *name, size_t bufsize, char *comment) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Gget_comment(loc_id, name, bufsize, comment)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef hid_t H5Gcreate_anon( hid_t loc_id, hid_t gcpl_id, hid_t gapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gcreate_anon(loc_id, gcpl_id, gapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Gcreate2(hid_t loc_id, char *name, hid_t lcpl_id, hid_t gcpl_id, hid_t gapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gcreate2(loc_id, name, lcpl_id, gcpl_id, gapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Gopen2( hid_t loc_id, char * name, hid_t gapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gopen2(loc_id, name, gapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Gget_info( hid_t group_id, H5G_info_t *group_info) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gget_info(group_id, group_info)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Gget_info_by_name( hid_t loc_id, char *group_name, H5G_info_t *group_info, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Gget_info_by_name(loc_id, group_name, group_info, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Gget_create_plist(hid_t group_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Gget_create_plist(group_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef H5I_type_t H5Iget_type(hid_t obj_id) except *:
- cdef H5I_type_t r
- with rlock:
- r = _hdf5.H5Iget_type(obj_id)
- if r<0:
- if set_exception():
- return <H5I_type_t>-1;
- return r
-
-cdef ssize_t H5Iget_name( hid_t obj_id, char *name, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Iget_name(obj_id, name, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef hid_t H5Iget_file_id(hid_t obj_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Iget_file_id(obj_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef int H5Idec_ref(hid_t obj_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Idec_ref(obj_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Iget_ref(hid_t obj_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Iget_ref(obj_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Iinc_ref(hid_t obj_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Iinc_ref(obj_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Lmove(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lmove(src_loc, src_name, dst_loc, dst_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lcopy(hid_t src_loc, char *src_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lcopy(src_loc, src_name, dst_loc, dst_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lcreate_hard(hid_t cur_loc, char *cur_name, hid_t dst_loc, char *dst_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lcreate_hard(cur_loc, cur_name, dst_loc, dst_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lcreate_soft(char *link_target, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lcreate_soft(link_target, link_loc_id, link_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Ldelete(hid_t loc_id, char *name, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Ldelete(loc_id, name, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Ldelete_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Ldelete_by_idx(loc_id, group_name, idx_type, order, n, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lget_val(hid_t loc_id, char *name, void *bufout, size_t size, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lget_val(loc_id, name, bufout, size, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lget_val_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, void *bufout, size_t size, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lget_val_by_idx(loc_id, group_name, idx_type, order, n, bufout, size, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Lexists(hid_t loc_id, char *name, hid_t lapl_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Lexists(loc_id, name, lapl_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Lget_info(hid_t loc_id, char *name, H5L_info_t *linfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lget_info(loc_id, name, linfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5L_info_t *linfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lget_info_by_idx(loc_id, group_name, idx_type, order, n, linfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef ssize_t H5Lget_name_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, char *name, size_t size, hid_t lapl_id) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Lget_name_by_idx(loc_id, group_name, idx_type, order, n, name, size, lapl_id)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef herr_t H5Literate(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Literate(grp_id, idx_type, order, idx, op, op_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Literate_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t *idx, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Literate_by_name(loc_id, group_name, idx_type, order, idx, op, op_data, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lvisit(hid_t grp_id, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lvisit(grp_id, idx_type, order, op, op_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lvisit_by_name(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, H5L_iterate_t op, void *op_data, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lvisit_by_name(loc_id, group_name, idx_type, order, op, op_data, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lunpack_elink_val(void *ext_linkval, size_t link_size, unsigned *flags, char **filename, char **obj_path) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lunpack_elink_val(ext_linkval, link_size, flags, filename, obj_path)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Lcreate_external(char *file_name, char *obj_name, hid_t link_loc_id, char *link_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Lcreate_external(file_name, obj_name, link_loc_id, link_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Oopen(hid_t loc_id, char *name, hid_t lapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Oopen(loc_id, name, lapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Oopen_by_addr(loc_id, addr)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Oopen_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Oopen_by_idx(loc_id, group_name, idx_type, order, n, lapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Oget_info(hid_t loc_id, H5O_info_t *oinfo) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oget_info(loc_id, oinfo)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oget_info_by_name(hid_t loc_id, char *name, H5O_info_t *oinfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oget_info_by_name(loc_id, name, oinfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oget_info_by_idx(hid_t loc_id, char *group_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5O_info_t *oinfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oget_info_by_idx(loc_id, group_name, idx_type, order, n, oinfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Olink(hid_t obj_id, hid_t new_loc_id, char *new_name, hid_t lcpl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Olink(obj_id, new_loc_id, new_name, lcpl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Ocopy(hid_t src_loc_id, char *src_name, hid_t dst_loc_id, char *dst_name, hid_t ocpypl_id, hid_t lcpl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Ocopy(src_loc_id, src_name, dst_loc_id, dst_name, ocpypl_id, lcpl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oincr_refcount(hid_t object_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oincr_refcount(object_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Odecr_refcount(hid_t object_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Odecr_refcount(object_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oset_comment(hid_t obj_id, char *comment) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oset_comment(obj_id, comment)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oset_comment_by_name(hid_t loc_id, char *name, char *comment, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oset_comment_by_name(loc_id, name, comment, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef ssize_t H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Oget_comment(obj_id, comment, bufsize)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef ssize_t H5Oget_comment_by_name(hid_t loc_id, char *name, char *comment, size_t bufsize, hid_t lapl_id) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Oget_comment_by_name(loc_id, name, comment, bufsize, lapl_id)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef herr_t H5Ovisit(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Ovisit(obj_id, idx_type, order, op, op_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Ovisit_by_name(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, H5O_iterate_t op, void *op_data, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Ovisit_by_name(loc_id, obj_name, idx_type, order, op, op_data, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Oclose(hid_t object_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Oclose(object_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Pcreate(hid_t plist_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Pcreate(plist_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Pcopy(hid_t plist_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Pcopy(plist_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef int H5Pget_class(hid_t plist_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Pget_class(plist_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Pclose(hid_t plist_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pclose(plist_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Pequal( hid_t id1, hid_t id2 ) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Pequal(id1, id2)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Pclose_class(hid_t id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pclose_class(id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_version(hid_t plist, unsigned int *super_, unsigned int* freelist, unsigned int *stab, unsigned int *shhdr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_version(plist, super_, freelist, stab, shhdr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_userblock(hid_t plist, hsize_t size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_userblock(plist, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_userblock(hid_t plist, hsize_t * size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_userblock(plist, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_sizes(hid_t plist, size_t sizeof_addr, size_t sizeof_size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_sizes(plist, sizeof_addr, sizeof_size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_sizes(hid_t plist, size_t *sizeof_addr, size_t *sizeof_size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_sizes(plist, sizeof_addr, sizeof_size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_sym_k(hid_t plist, unsigned int ik, unsigned int lk) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_sym_k(plist, ik, lk)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_sym_k(hid_t plist, unsigned int *ik, unsigned int *lk) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_sym_k(plist, ik, lk)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_istore_k(hid_t plist, unsigned int ik) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_istore_k(plist, ik)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_istore_k(hid_t plist, unsigned int *ik) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_istore_k(plist, ik)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fclose_degree(hid_t fapl_id, H5F_close_degree_t fc_degree) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fclose_degree(fapl_id, fc_degree)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_fclose_degree(hid_t fapl_id, H5F_close_degree_t *fc_degree) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_fclose_degree(fapl_id, fc_degree)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_core( hid_t fapl_id, size_t increment, hbool_t backing_store) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_core(fapl_id, increment, backing_store)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_fapl_core( hid_t fapl_id, size_t *increment, hbool_t *backing_store) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_fapl_core(fapl_id, increment, backing_store)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_family( hid_t fapl_id, hsize_t memb_size, hid_t memb_fapl_id ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_family(fapl_id, memb_size, memb_fapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_fapl_family( hid_t fapl_id, hsize_t *memb_size, hid_t *memb_fapl_id ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_fapl_family(fapl_id, memb_size, memb_fapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_family_offset( hid_t fapl_id, hsize_t offset) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_family_offset(fapl_id, offset)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_family_offset( hid_t fapl_id, hsize_t *offset) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_family_offset(fapl_id, offset)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_log(hid_t fapl_id, char *logfile, unsigned int flags, size_t buf_size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_log(fapl_id, logfile, flags, buf_size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_multi(hid_t fapl_id, H5FD_mem_t *memb_map, hid_t *memb_fapl, char **memb_name, haddr_t *memb_addr, hbool_t relax) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_multi(fapl_id, memb_map, memb_fapl, memb_name, memb_addr, relax)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, int rdcc_nelmts, size_t rdcc_nbytes, double rdcc_w0) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_cache(plist_id, mdc_nelmts, rdcc_nelmts, rdcc_nbytes, rdcc_w0)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_cache(hid_t plist_id, int *mdc_nelmts, int *rdcc_nelmts, size_t *rdcc_nbytes, double *rdcc_w0) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_cache(plist_id, mdc_nelmts, rdcc_nelmts, rdcc_nbytes, rdcc_w0)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_sec2(hid_t fapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_sec2(fapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fapl_stdio(hid_t fapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_stdio(fapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Pget_driver(hid_t fapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Pget_driver(fapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Pget_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_mdc_config(plist_id, config_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_mdc_config(hid_t plist_id, H5AC_cache_config_t *config_ptr) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_mdc_config(plist_id, config_ptr)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_layout(hid_t plist, int layout) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_layout(plist, layout)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5D_layout_t H5Pget_layout(hid_t plist) except *:
- cdef H5D_layout_t r
- with rlock:
- r = _hdf5.H5Pget_layout(plist)
- if r<0:
- if set_exception():
- return <H5D_layout_t>-1;
- return r
-
-cdef herr_t H5Pset_chunk(hid_t plist, int ndims, hsize_t * dim) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_chunk(plist, ndims, dim)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Pget_chunk(hid_t plist, int max_ndims, hsize_t * dims ) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Pget_chunk(plist, max_ndims, dims)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Pset_deflate( hid_t plist, int level) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_deflate(plist, level)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fill_value(plist_id, type_id, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_fill_value(hid_t plist_id, hid_t type_id, void *value ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_fill_value(plist_id, type_id, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pfill_value_defined(hid_t plist_id, H5D_fill_value_t *status ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pfill_value_defined(plist_id, status)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fill_time(hid_t plist_id, H5D_fill_time_t fill_time ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fill_time(plist_id, fill_time)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_fill_time(hid_t plist_id, H5D_fill_time_t *fill_time ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_fill_time(plist_id, fill_time)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_alloc_time(hid_t plist_id, H5D_alloc_time_t alloc_time ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_alloc_time(plist_id, alloc_time)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_alloc_time(hid_t plist_id, H5D_alloc_time_t *alloc_time ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_alloc_time(plist_id, alloc_time)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int* cd_values ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_filter(plist, filter, flags, cd_nelmts, cd_values)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Pall_filters_avail(hid_t dcpl_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Pall_filters_avail(dcpl_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef int H5Pget_nfilters(hid_t plist) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Pget_nfilters(plist)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef H5Z_filter_t H5Pget_filter(hid_t plist, unsigned int filter_number, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name ) except *:
- cdef H5Z_filter_t r
- with rlock:
- r = _hdf5.H5Pget_filter(plist, filter_number, flags, cd_nelmts, cd_values, namelen, name)
- if r<0:
- if set_exception():
- return <H5Z_filter_t>-1;
- return r
-
-cdef herr_t H5Pget_filter_by_id( hid_t plist_id, H5Z_filter_t filter, unsigned int *flags, size_t *cd_nelmts, unsigned int* cd_values, size_t namelen, char* name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_filter_by_id(plist_id, filter, flags, cd_nelmts, cd_values, namelen, name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pmodify_filter(hid_t plist, H5Z_filter_t filter, unsigned int flags, size_t cd_nelmts, unsigned int *cd_values) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pmodify_filter(plist, filter, flags, cd_nelmts, cd_values)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Premove_filter(hid_t plist, H5Z_filter_t filter ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Premove_filter(plist, filter)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_fletcher32(hid_t plist) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fletcher32(plist)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_shuffle(hid_t plist_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_shuffle(plist_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_szip(hid_t plist, unsigned int options_mask, unsigned int pixels_per_block) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_szip(plist, options_mask, pixels_per_block)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_scaleoffset(hid_t plist, H5Z_SO_scale_type_t scale_type, int scale_factor) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_scaleoffset(plist, scale_type, scale_factor)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_edc_check(hid_t plist, H5Z_EDC_t check) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_edc_check(plist, check)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5Z_EDC_t H5Pget_edc_check(hid_t plist) except *:
- cdef H5Z_EDC_t r
- with rlock:
- r = _hdf5.H5Pget_edc_check(plist)
- if r<0:
- if set_exception():
- return <H5Z_EDC_t>-1;
- return r
-
-cdef herr_t H5Pset_chunk_cache( hid_t dapl_id, size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0 ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_chunk_cache( hid_t dapl_id, size_t *rdcc_nslots, size_t *rdcc_nbytes, double *rdcc_w0 ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_sieve_buf_size(hid_t fapl_id, size_t size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_sieve_buf_size(fapl_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_sieve_buf_size(hid_t fapl_id, size_t *size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_sieve_buf_size(fapl_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_nlinks(hid_t plist_id, size_t nlinks) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_nlinks(plist_id, nlinks)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_nlinks(hid_t plist_id, size_t *nlinks) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_nlinks(plist_id, nlinks)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_elink_prefix(hid_t plist_id, char *prefix) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_elink_prefix(plist_id, prefix)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef ssize_t H5Pget_elink_prefix(hid_t plist_id, char *prefix, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Pget_elink_prefix(plist_id, prefix, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef hid_t H5Pget_elink_fapl(hid_t lapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Pget_elink_fapl(lapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Pset_elink_fapl(hid_t lapl_id, hid_t fapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_elink_fapl(lapl_id, fapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_create_intermediate_group(hid_t plist_id, unsigned crt_intmd) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_create_intermediate_group(plist_id, crt_intmd)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_create_intermediate_group(hid_t plist_id, unsigned *crt_intmd) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_create_intermediate_group(plist_id, crt_intmd)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_copy_object(hid_t plist_id, unsigned crt_intmd) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_copy_object(plist_id, crt_intmd)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_copy_object(hid_t plist_id, unsigned *crt_intmd) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_copy_object(plist_id, crt_intmd)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_char_encoding(hid_t plist_id, H5T_cset_t encoding) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_char_encoding(plist_id, encoding)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_char_encoding(hid_t plist_id, H5T_cset_t *encoding) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_char_encoding(plist_id, encoding)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_obj_track_times( hid_t ocpl_id, hbool_t track_times ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_obj_track_times(ocpl_id, track_times)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_obj_track_times( hid_t ocpl_id, hbool_t *track_times ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_obj_track_times(ocpl_id, track_times)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_local_heap_size_hint(hid_t plist_id, size_t size_hint) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_local_heap_size_hint(plist_id, size_hint)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_local_heap_size_hint(hid_t plist_id, size_t *size_hint) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_local_heap_size_hint(plist_id, size_hint)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_link_phase_change(hid_t plist_id, unsigned max_compact, unsigned min_dense) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_link_phase_change(plist_id, max_compact, min_dense)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_link_phase_change(hid_t plist_id, unsigned *max_compact , unsigned *min_dense) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_link_phase_change(plist_id, max_compact, min_dense)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_est_link_info(hid_t plist_id, unsigned est_num_entries, unsigned est_name_len) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_est_link_info(plist_id, est_num_entries, est_name_len)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_est_link_info(hid_t plist_id, unsigned *est_num_entries , unsigned *est_name_len) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_est_link_info(plist_id, est_num_entries, est_name_len)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_link_creation_order(hid_t plist_id, unsigned crt_order_flags) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_link_creation_order(plist_id, crt_order_flags)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_link_creation_order(hid_t plist_id, unsigned *crt_order_flags) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_link_creation_order(plist_id, crt_order_flags)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pset_libver_bounds(hid_t fapl_id, H5F_libver_t libver_low, H5F_libver_t libver_high) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_libver_bounds(fapl_id, libver_low, libver_high)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Pget_libver_bounds(hid_t fapl_id, H5F_libver_t *libver_low, H5F_libver_t *libver_high) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pget_libver_bounds(fapl_id, libver_low, libver_high)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Rcreate(void *ref, hid_t loc_id, char *name, H5R_type_t ref_type, hid_t space_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Rcreate(ref, loc_id, name, ref_type, space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Rdereference(hid_t obj_id, H5R_type_t ref_type, void *ref) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Rdereference(obj_id, ref_type, ref)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Rget_region(hid_t dataset, H5R_type_t ref_type, void *ref) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Rget_region(dataset, ref_type, ref)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef H5G_obj_t H5Rget_obj_type(hid_t id, H5R_type_t ref_type, void *ref) except *:
- cdef H5G_obj_t r
- with rlock:
- r = _hdf5.H5Rget_obj_type(id, ref_type, ref)
- if r<0:
- if set_exception():
- return <H5G_obj_t>-1;
- return r
-
-cdef ssize_t H5Rget_name(hid_t loc_id, H5R_type_t ref_type, void *ref, char *name, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Rget_name(loc_id, ref_type, ref, name, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef hid_t H5Screate(H5S_class_t type) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Screate(type)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Scopy(hid_t space_id ) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Scopy(space_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Sclose(hid_t space_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sclose(space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Screate_simple(int rank, hsize_t *dims, hsize_t *maxdims) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Screate_simple(rank, dims, maxdims)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef htri_t H5Sis_simple(hid_t space_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Sis_simple(space_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Soffset_simple(hid_t space_id, hssize_t *offset ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Soffset_simple(space_id, offset)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Sget_simple_extent_ndims(hid_t space_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Sget_simple_extent_ndims(space_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Sget_simple_extent_dims(hid_t space_id, hsize_t *dims, hsize_t *maxdims) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Sget_simple_extent_dims(space_id, dims, maxdims)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef hssize_t H5Sget_simple_extent_npoints(hid_t space_id) except *:
- cdef hssize_t r
- with rlock:
- r = _hdf5.H5Sget_simple_extent_npoints(space_id)
- if r<0:
- if set_exception():
- return <hssize_t>-1;
- return r
-
-cdef H5S_class_t H5Sget_simple_extent_type(hid_t space_id) except *:
- cdef H5S_class_t r
- with rlock:
- r = _hdf5.H5Sget_simple_extent_type(space_id)
- if r<0:
- if set_exception():
- return <H5S_class_t>-1;
- return r
-
-cdef herr_t H5Sextent_copy(hid_t dest_space_id, hid_t source_space_id ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sextent_copy(dest_space_id, source_space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sset_extent_simple(hid_t space_id, int rank, hsize_t *current_size, hsize_t *maximum_size ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sset_extent_simple(space_id, rank, current_size, maximum_size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sset_extent_none(hid_t space_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sset_extent_none(space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5S_sel_type H5Sget_select_type(hid_t space_id) except *:
- cdef H5S_sel_type r
- with rlock:
- r = _hdf5.H5Sget_select_type(space_id)
- if r<0:
- if set_exception():
- return <H5S_sel_type>-1;
- return r
-
-cdef hssize_t H5Sget_select_npoints(hid_t space_id) except *:
- cdef hssize_t r
- with rlock:
- r = _hdf5.H5Sget_select_npoints(space_id)
- if r<0:
- if set_exception():
- return <hssize_t>-1;
- return r
-
-cdef herr_t H5Sget_select_bounds(hid_t space_id, hsize_t *start, hsize_t *end) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sget_select_bounds(space_id, start, end)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sselect_all(hid_t space_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sselect_all(space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sselect_none(hid_t space_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sselect_none(space_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Sselect_valid(hid_t space_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Sselect_valid(space_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef hssize_t H5Sget_select_elem_npoints(hid_t space_id) except *:
- cdef hssize_t r
- with rlock:
- r = _hdf5.H5Sget_select_elem_npoints(space_id)
- if r<0:
- if set_exception():
- return <hssize_t>-1;
- return r
-
-cdef herr_t H5Sget_select_elem_pointlist(hid_t space_id, hsize_t startpoint, hsize_t numpoints, hsize_t *buf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sget_select_elem_pointlist(space_id, startpoint, numpoints, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, size_t num_elements, hsize_t **coord) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sselect_elements(space_id, op, num_elements, coord)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hssize_t H5Sget_select_hyper_nblocks(hid_t space_id ) except *:
- cdef hssize_t r
- with rlock:
- r = _hdf5.H5Sget_select_hyper_nblocks(space_id)
- if r<0:
- if set_exception():
- return <hssize_t>-1;
- return r
-
-cdef herr_t H5Sget_select_hyper_blocklist(hid_t space_id, hsize_t startblock, hsize_t numblocks, hsize_t *buf ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sget_select_hyper_blocklist(space_id, startblock, numblocks, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, hsize_t *start, hsize_t *_stride, hsize_t *count, hsize_t *_block) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sselect_hyperslab(space_id, op, start, _stride, count, _block)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Sencode(hid_t obj_id, void *buf, size_t *nalloc) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Sencode(obj_id, buf, nalloc)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Sdecode(void *buf) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Sdecode(buf)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Tcreate(H5T_class_t type, size_t size) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tcreate(type, size)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Topen(hid_t loc, char* name) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Topen(loc, name)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Tcommit(hid_t loc_id, char* name, hid_t type) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tcommit(loc_id, name, type)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Tcommitted(hid_t type) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Tcommitted(type)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef hid_t H5Tcopy(hid_t type_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tcopy(type_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef htri_t H5Tequal(hid_t type_id1, hid_t type_id2 ) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Tequal(type_id1, type_id2)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Tlock(hid_t type_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tlock(type_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_class_t H5Tget_class(hid_t type_id) except *:
- cdef H5T_class_t r
- with rlock:
- r = _hdf5.H5Tget_class(type_id)
- if r<0:
- if set_exception():
- return <H5T_class_t>-1;
- return r
-
-cdef size_t H5Tget_size(hid_t type_id) except *:
- cdef size_t r
- with rlock:
- r = _hdf5.H5Tget_size(type_id)
- if r==0:
- if set_exception():
- return <size_t>0;
- return r
-
-cdef hid_t H5Tget_super(hid_t type) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tget_super(type)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef htri_t H5Tdetect_class(hid_t type_id, H5T_class_t dtype_class) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Tdetect_class(type_id, dtype_class)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Tclose(hid_t type_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tclose(type_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Tget_native_type(hid_t type_id, H5T_direction_t direction) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tget_native_type(type_id, direction)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Tconvert(hid_t src_id, hid_t dst_id, size_t nelmts, void *buf, void *background, hid_t plist_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tconvert(src_id, dst_id, nelmts, buf, background, plist_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tset_size(hid_t type_id, size_t size) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_size(type_id, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_order_t H5Tget_order(hid_t type_id) except *:
- cdef H5T_order_t r
- with rlock:
- r = _hdf5.H5Tget_order(type_id)
- if r<0:
- if set_exception():
- return <H5T_order_t>-1;
- return r
-
-cdef herr_t H5Tset_order(hid_t type_id, H5T_order_t order) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_order(type_id, order)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hsize_t H5Tget_precision(hid_t type_id) except *:
- cdef hsize_t r
- with rlock:
- r = _hdf5.H5Tget_precision(type_id)
- if r==0:
- if set_exception():
- return <hsize_t>0;
- return r
-
-cdef herr_t H5Tset_precision(hid_t type_id, size_t prec) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_precision(type_id, prec)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Tget_offset(hid_t type_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_offset(type_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Tset_offset(hid_t type_id, size_t offset) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_offset(type_id, offset)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tget_pad(hid_t type_id, H5T_pad_t * lsb, H5T_pad_t * msb ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tget_pad(type_id, lsb, msb)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tset_pad(hid_t type_id, H5T_pad_t lsb, H5T_pad_t msb ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_pad(type_id, lsb, msb)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_sign_t H5Tget_sign(hid_t type_id) except *:
- cdef H5T_sign_t r
- with rlock:
- r = _hdf5.H5Tget_sign(type_id)
- if r<0:
- if set_exception():
- return <H5T_sign_t>-1;
- return r
-
-cdef herr_t H5Tset_sign(hid_t type_id, H5T_sign_t sign) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_sign(type_id, sign)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tget_fields(hid_t type_id, size_t *spos, size_t *epos, size_t *esize, size_t *mpos, size_t *msize ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tget_fields(type_id, spos, epos, esize, mpos, msize)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tset_fields(hid_t type_id, size_t spos, size_t epos, size_t esize, size_t mpos, size_t msize ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_fields(type_id, spos, epos, esize, mpos, msize)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef size_t H5Tget_ebias(hid_t type_id) except *:
- cdef size_t r
- with rlock:
- r = _hdf5.H5Tget_ebias(type_id)
- if r==0:
- if set_exception():
- return <size_t>0;
- return r
-
-cdef herr_t H5Tset_ebias(hid_t type_id, size_t ebias) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_ebias(type_id, ebias)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_norm_t H5Tget_norm(hid_t type_id) except *:
- cdef H5T_norm_t r
- with rlock:
- r = _hdf5.H5Tget_norm(type_id)
- if r<0:
- if set_exception():
- return <H5T_norm_t>-1;
- return r
-
-cdef herr_t H5Tset_norm(hid_t type_id, H5T_norm_t norm) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_norm(type_id, norm)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_pad_t H5Tget_inpad(hid_t type_id) except *:
- cdef H5T_pad_t r
- with rlock:
- r = _hdf5.H5Tget_inpad(type_id)
- if r<0:
- if set_exception():
- return <H5T_pad_t>-1;
- return r
-
-cdef herr_t H5Tset_inpad(hid_t type_id, H5T_pad_t inpad) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_inpad(type_id, inpad)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_cset_t H5Tget_cset(hid_t type_id) except *:
- cdef H5T_cset_t r
- with rlock:
- r = _hdf5.H5Tget_cset(type_id)
- if r<0:
- if set_exception():
- return <H5T_cset_t>-1;
- return r
-
-cdef herr_t H5Tset_cset(hid_t type_id, H5T_cset_t cset) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_cset(type_id, cset)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_str_t H5Tget_strpad(hid_t type_id) except *:
- cdef H5T_str_t r
- with rlock:
- r = _hdf5.H5Tget_strpad(type_id)
- if r<0:
- if set_exception():
- return <H5T_str_t>-1;
- return r
-
-cdef herr_t H5Tset_strpad(hid_t type_id, H5T_str_t strpad) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_strpad(type_id, strpad)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Tvlen_create(hid_t base_type_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tvlen_create(base_type_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef htri_t H5Tis_variable_str(hid_t dtype_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Tis_variable_str(dtype_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef int H5Tget_nmembers(hid_t type_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_nmembers(type_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef H5T_class_t H5Tget_member_class(hid_t type_id, int member_no) except *:
- cdef H5T_class_t r
- with rlock:
- r = _hdf5.H5Tget_member_class(type_id, member_no)
- if r<0:
- if set_exception():
- return <H5T_class_t>-1;
- return r
-
-cdef char* H5Tget_member_name(hid_t type_id, unsigned membno) except *:
- cdef char* r
- with rlock:
- r = _hdf5.H5Tget_member_name(type_id, membno)
- if r==NULL:
- if set_exception():
- return <char*>NULL;
- return r
-
-cdef hid_t H5Tget_member_type(hid_t type_id, unsigned membno) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tget_member_type(type_id, membno)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef int H5Tget_member_offset(hid_t type_id, int membno) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_member_offset(type_id, membno)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Tget_member_index(hid_t type_id, char* name) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_member_index(type_id, name)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Tinsert(hid_t parent_id, char *name, size_t offset, hid_t member_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tinsert(parent_id, name, offset, member_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tpack(hid_t type_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tpack(type_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Tenum_create(hid_t base_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tenum_create(base_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Tenum_insert(hid_t type, char *name, void *value) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tenum_insert(type, name, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tenum_nameof( hid_t type, void *value, char *name, size_t size ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tenum_nameof(type, value, name, size)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tenum_valueof( hid_t type, char *name, void *value ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tenum_valueof(type, name, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tget_member_value(hid_t type, unsigned int memb_no, void *value ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tget_member_value(type, memb_no, value)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Tarray_create(hid_t base_id, int ndims, hsize_t *dims, int *perm) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tarray_create(base_id, ndims, dims, perm)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef int H5Tget_array_ndims(hid_t type_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_array_ndims(type_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef int H5Tget_array_dims(hid_t type_id, hsize_t *dims, int *perm) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Tget_array_dims(type_id, dims, perm)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5Tset_tag(hid_t type_id, char* tag) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tset_tag(type_id, tag)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef char* H5Tget_tag(hid_t type_id) except *:
- cdef char* r
- with rlock:
- r = _hdf5.H5Tget_tag(type_id)
- if r==NULL:
- if set_exception():
- return <char*>NULL;
- return r
-
-cdef hid_t H5Tdecode(unsigned char *buf) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Tdecode(buf)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Tencode(hid_t obj_id, unsigned char *buf, size_t *nalloc) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tencode(obj_id, buf, nalloc)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tcommit2(hid_t loc_id, char *name, hid_t dtype_id, hid_t lcpl_id, hid_t tcpl_id, hid_t tapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tcommit2(loc_id, name, dtype_id, lcpl_id, tcpl_id, tapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef H5T_conv_t H5Tfind(hid_t src_id, hid_t dst_id, H5T_cdata_t **pcdata) except *:
- cdef H5T_conv_t r
- with rlock:
- r = _hdf5.H5Tfind(src_id, dst_id, pcdata)
- if r==NULL:
- if set_exception():
- return <H5T_conv_t>NULL;
- return r
-
-cdef herr_t H5Tregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tregister(pers, name, src_id, dst_id, func)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Tunregister(H5T_pers_t pers, char *name, hid_t src_id, hid_t dst_id, H5T_conv_t func) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Tunregister(pers, name, src_id, dst_id, func)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Zfilter_avail(H5Z_filter_t id_) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Zfilter_avail(id_)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Zget_filter_info(H5Z_filter_t filter_, unsigned int *filter_config_flags) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Zget_filter_info(filter_, filter_config_flags)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Acreate(hid_t loc_id, char *name, hid_t type_id, hid_t space_id, hid_t create_plist) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Acreate(loc_id, name, type_id, space_id, create_plist)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Aopen_idx(hid_t loc_id, unsigned int idx) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Aopen_idx(loc_id, idx)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Aopen_name(hid_t loc_id, char *name) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Aopen_name(loc_id, name)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Aclose(hid_t attr_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aclose(attr_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Adelete(hid_t loc_id, char *name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Adelete(loc_id, name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aread(hid_t attr_id, hid_t mem_type_id, void *buf) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aread(attr_id, mem_type_id, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Awrite(hid_t attr_id, hid_t mem_type_id, void *buf ) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Awrite(attr_id, mem_type_id, buf)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5Aget_num_attrs(hid_t loc_id) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5Aget_num_attrs(loc_id)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef ssize_t H5Aget_name(hid_t attr_id, size_t buf_size, char *buf) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5Aget_name(attr_id, buf_size, buf)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef hid_t H5Aget_space(hid_t attr_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Aget_space(attr_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef hid_t H5Aget_type(hid_t attr_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Aget_type(attr_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Aiterate(hid_t loc_id, unsigned * idx, H5A_operator_t op, void* op_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aiterate(loc_id, idx, op, op_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Adelete_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Adelete_by_name(loc_id, obj_name, attr_name, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Adelete_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Adelete_by_idx(loc_id, obj_name, idx_type, order, n, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hid_t H5Acreate_by_name(hid_t loc_id, char *obj_name, char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id, hid_t lapl_id) except *:
- cdef hid_t r
- with rlock:
- r = _hdf5.H5Acreate_by_name(loc_id, obj_name, attr_name, type_id, space_id, acpl_id, aapl_id, lapl_id)
- if r<0:
- if set_exception():
- return <hid_t>-1;
- return r
-
-cdef herr_t H5Aopen(hid_t obj_id, char *attr_name, hid_t aapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aopen(obj_id, attr_name, aapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aopen_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t aapl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aopen_by_name(loc_id, obj_name, attr_name, aapl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aopen_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, hid_t aapl_id, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5Aexists_by_name( hid_t loc_id, char *obj_name, char *attr_name, hid_t lapl_id) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Aexists_by_name(loc_id, obj_name, attr_name, lapl_id)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef htri_t H5Aexists(hid_t obj_id, char *attr_name) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5Aexists(obj_id, attr_name)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5Arename(hid_t loc_id, char *old_attr_name, char *new_attr_name) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Arename(loc_id, old_attr_name, new_attr_name)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Arename_by_name(hid_t loc_id, char *obj_name, char *old_attr_name, char *new_attr_name, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Arename_by_name(loc_id, obj_name, old_attr_name, new_attr_name, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aget_info( hid_t attr_id, H5A_info_t *ainfo) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aget_info(attr_id, ainfo)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aget_info_by_name(hid_t loc_id, char *obj_name, char *attr_name, H5A_info_t *ainfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aget_info_by_name(loc_id, obj_name, attr_name, ainfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aget_info_by_idx(hid_t loc_id, char *obj_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t n, H5A_info_t *ainfo, hid_t lapl_id) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aget_info_by_idx(loc_id, obj_name, idx_type, order, n, ainfo, lapl_id)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5Aiterate2(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order, hsize_t *n, H5A_operator2_t op, void *op_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Aiterate2(obj_id, idx_type, order, n, op, op_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef hsize_t H5Aget_storage_size(hid_t attr_id) except *:
- cdef hsize_t r
- with rlock:
- r = _hdf5.H5Aget_storage_size(attr_id)
- if r==0:
- if set_exception():
- return <hsize_t>0;
- return r
-
-IF MPI:
- cdef herr_t H5Pset_fapl_mpio(hid_t fapl_id, MPI_Comm comm, MPI_Info info) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_mpio(fapl_id, comm, info)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-IF MPI:
- cdef herr_t H5Pset_fapl_mpiposix(hid_t fapl_id, MPI_Comm comm, hbool_t hints) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Pset_fapl_mpiposix(fapl_id, comm, hints)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- cdef herr_t H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fset_mpi_atomicity(file_id, flag)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-IF HDF5_VERSION >= (1, 8, 9):
- IF MPI:
- cdef herr_t H5Fget_mpi_atomicity(hid_t file_id, hbool_t *flag) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5Fget_mpi_atomicity(file_id, flag)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5DSattach_scale(did, dsid, idx)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5DSdetach_scale(did, dsid, idx)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef herr_t H5DSset_scale(hid_t dsid, char *dimname) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5DSset_scale(dsid, dimname)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef int H5DSget_num_scales(hid_t did, unsigned int dim) except *:
- cdef int r
- with rlock:
- r = _hdf5.H5DSget_num_scales(did, dim)
- if r<0:
- if set_exception():
- return <int>-1;
- return r
-
-cdef herr_t H5DSset_label(hid_t did, unsigned int idx, char *label) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5DSset_label(did, idx, label)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5DSget_label(did, idx, label, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef ssize_t H5DSget_scale_name(hid_t did, char *name, size_t size) except *:
- cdef ssize_t r
- with rlock:
- r = _hdf5.H5DSget_scale_name(did, name, size)
- if r<0:
- if set_exception():
- return <ssize_t>-1;
- return r
-
-cdef htri_t H5DSis_scale(hid_t did) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5DSis_scale(did)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
-cdef herr_t H5DSiterate_scales(hid_t did, unsigned int dim, int *idx, H5DS_iterate_t visitor, void *visitor_data) except *:
- cdef herr_t r
- with rlock:
- r = _hdf5.H5DSiterate_scales(did, dim, idx, visitor, visitor_data)
- if r<0:
- if set_exception():
- return <herr_t>-1;
- return r
-
-cdef htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) except *:
- cdef htri_t r
- with rlock:
- r = _hdf5.H5DSis_attached(did, dsid, idx)
- if r<0:
- if set_exception():
- return <htri_t>-1;
- return r
-
diff --git a/h5py/h5.c b/h5py/h5.c
deleted file mode 100644
index 19491d3..0000000
--- a/h5py/h5.c
+++ /dev/null
@@ -1,5480 +0,0 @@
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- /* "h5py/h5.pyx":1
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- __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0;
- goto __pyx_L0;
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- if (__pyx_m) {
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-{
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- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
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- PyString_AsString(kw_name));
- #endif
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-
-static int __Pyx_ParseOptionalKeywords(
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-{
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- while (PyDict_Next(kwds, &pos, &key, &value)) {
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- #if PY_MAJOR_VERSION < 3
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- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
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- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
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- name++;
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- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
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-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
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- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static void __Pyx_RaiseArgtupleInvalid(
- const char* func_name,
- int exact,
- Py_ssize_t num_min,
- Py_ssize_t num_max,
- Py_ssize_t num_found)
-{
- Py_ssize_t num_expected;
- const char *more_or_less;
- if (num_found < num_min) {
- num_expected = num_min;
- more_or_less = "at least";
- } else {
- num_expected = num_max;
- more_or_less = "at most";
- }
- if (exact) {
- more_or_less = "exactly";
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- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
- (num_expected == 1) ? "" : "s", num_found);
-}
-
-static CYTHON_INLINE int __Pyx_CheckKeywordStrings(
- PyObject *kwdict,
- const char* function_name,
- int kw_allowed)
-{
- PyObject* key = 0;
- Py_ssize_t pos = 0;
-#if CPYTHON_COMPILING_IN_PYPY
- if (!kw_allowed && PyDict_Next(kwdict, &pos, &key, 0))
- goto invalid_keyword;
- return 1;
-#else
- while (PyDict_Next(kwdict, &pos, &key, 0)) {
- #if PY_MAJOR_VERSION < 3
- if (unlikely(!PyString_CheckExact(key)) && unlikely(!PyString_Check(key)))
- #endif
- if (unlikely(!PyUnicode_Check(key)))
- goto invalid_keyword_type;
- }
- if ((!kw_allowed) && unlikely(key))
- goto invalid_keyword;
- return 1;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- return 0;
-#endif
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
- return 0;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseClosureNameError(const char *varname) {
- PyErr_Format(PyExc_NameError, "free variable '%s' referenced before assignment in enclosing scope", varname);
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
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- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
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- else {
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- "exception causes must derive from "
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- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
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-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
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-#else
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-#endif
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-#if CYTHON_COMPILING_IN_CPYTHON
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- goto bad;
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- #endif
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- Py_INCREF(local_tb);
- *type = local_type;
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-#if CYTHON_COMPILING_IN_CPYTHON
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- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
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- /* Make sure tstate is in a consistent state when we XDECREF
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- Py_XDECREF(local_tb);
- return -1;
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-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
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-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
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- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
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-
-static PyObject *__Pyx_FindPy2Metaclass(PyObject *bases) {
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-#if PY_MAJOR_VERSION < 3
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-
-static PyObject *__Pyx_CreateClass(PyObject *bases, PyObject *dict, PyObject *name,
- PyObject *qualname, PyObject *modname) {
- PyObject *result;
- PyObject *metaclass;
- if (PyDict_SetItemString(dict, "__module__", modname) < 0)
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-static PyObject *
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-#else
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-{
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-}
-static PyObject *
-__Pyx_CyFunction_get_name(__pyx_CyFunctionObject *op)
-{
- if (unlikely(op->func_name == NULL)) {
-#if PY_MAJOR_VERSION >= 3
- op->func_name = PyUnicode_InternFromString(op->func.m_ml->ml_name);
-#else
- op->func_name = PyString_InternFromString(op->func.m_ml->ml_name);
-#endif
- if (unlikely(op->func_name == NULL))
- return NULL;
- }
- Py_INCREF(op->func_name);
- return op->func_name;
-}
-static int
-__Pyx_CyFunction_set_name(__pyx_CyFunctionObject *op, PyObject *value)
-{
- PyObject *tmp;
-#if PY_MAJOR_VERSION >= 3
- if (unlikely(value == NULL || !PyUnicode_Check(value))) {
-#else
- if (unlikely(value == NULL || !PyString_Check(value))) {
-#endif
- PyErr_SetString(PyExc_TypeError,
- "__name__ must be set to a string object");
- return -1;
- }
- tmp = op->func_name;
- Py_INCREF(value);
- op->func_name = value;
- Py_XDECREF(tmp);
- return 0;
-}
-static PyObject *
-__Pyx_CyFunction_get_qualname(__pyx_CyFunctionObject *op)
-{
- Py_INCREF(op->func_qualname);
- return op->func_qualname;
-}
-static int
-__Pyx_CyFunction_set_qualname(__pyx_CyFunctionObject *op, PyObject *value)
-{
- PyObject *tmp;
-#if PY_MAJOR_VERSION >= 3
- if (unlikely(value == NULL || !PyUnicode_Check(value))) {
-#else
- if (unlikely(value == NULL || !PyString_Check(value))) {
-#endif
- PyErr_SetString(PyExc_TypeError,
- "__qualname__ must be set to a string object");
- return -1;
- }
- tmp = op->func_qualname;
- Py_INCREF(value);
- op->func_qualname = value;
- Py_XDECREF(tmp);
- return 0;
-}
-static PyObject *
-__Pyx_CyFunction_get_self(__pyx_CyFunctionObject *m, CYTHON_UNUSED void *closure)
-{
- PyObject *self;
- self = m->func_closure;
- if (self == NULL)
- self = Py_None;
- Py_INCREF(self);
- return self;
-}
-static PyObject *
-__Pyx_CyFunction_get_dict(__pyx_CyFunctionObject *op)
-{
- if (unlikely(op->func_dict == NULL)) {
- op->func_dict = PyDict_New();
- if (unlikely(op->func_dict == NULL))
- return NULL;
- }
- Py_INCREF(op->func_dict);
- return op->func_dict;
-}
-static int
-__Pyx_CyFunction_set_dict(__pyx_CyFunctionObject *op, PyObject *value)
-{
- PyObject *tmp;
- if (unlikely(value == NULL)) {
- PyErr_SetString(PyExc_TypeError,
- "function's dictionary may not be deleted");
- return -1;
- }
- if (unlikely(!PyDict_Check(value))) {
- PyErr_SetString(PyExc_TypeError,
- "setting function's dictionary to a non-dict");
- return -1;
- }
- tmp = op->func_dict;
- Py_INCREF(value);
- op->func_dict = value;
- Py_XDECREF(tmp);
- return 0;
-}
-static PyObject *
-__Pyx_CyFunction_get_globals(CYTHON_UNUSED __pyx_CyFunctionObject *op)
-{
- PyObject* dict = PyModule_GetDict(__pyx_m);
- Py_XINCREF(dict);
- return dict;
-}
-static PyObject *
-__Pyx_CyFunction_get_closure(CYTHON_UNUSED __pyx_CyFunctionObject *op)
-{
- Py_INCREF(Py_None);
- return Py_None;
-}
-static PyObject *
-__Pyx_CyFunction_get_code(__pyx_CyFunctionObject *op)
-{
- PyObject* result = (op->func_code) ? op->func_code : Py_None;
- Py_INCREF(result);
- return result;
-}
-static PyObject *
-__Pyx_CyFunction_get_defaults(__pyx_CyFunctionObject *op)
-{
- if (op->defaults_tuple) {
- Py_INCREF(op->defaults_tuple);
- return op->defaults_tuple;
- }
- if (op->defaults_getter) {
- PyObject *res = op->defaults_getter((PyObject *) op);
- if (likely(res)) {
- Py_INCREF(res);
- op->defaults_tuple = res;
- }
- return res;
- }
- Py_INCREF(Py_None);
- return Py_None;
-}
-static PyGetSetDef __pyx_CyFunction_getsets[] = {
- {(char *) "func_doc", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0},
- {(char *) "__doc__", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0},
- {(char *) "func_name", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0},
- {(char *) "__name__", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0},
- {(char *) "__qualname__", (getter)__Pyx_CyFunction_get_qualname, (setter)__Pyx_CyFunction_set_qualname, 0, 0},
- {(char *) "__self__", (getter)__Pyx_CyFunction_get_self, 0, 0, 0},
- {(char *) "func_dict", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0},
- {(char *) "__dict__", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0},
- {(char *) "func_globals", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0},
- {(char *) "__globals__", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0},
- {(char *) "func_closure", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0},
- {(char *) "__closure__", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0},
- {(char *) "func_code", (getter)__Pyx_CyFunction_get_code, 0, 0, 0},
- {(char *) "__code__", (getter)__Pyx_CyFunction_get_code, 0, 0, 0},
- {(char *) "func_defaults", (getter)__Pyx_CyFunction_get_defaults, 0, 0, 0},
- {(char *) "__defaults__", (getter)__Pyx_CyFunction_get_defaults, 0, 0, 0},
- {0, 0, 0, 0, 0}
-};
-#ifndef PY_WRITE_RESTRICTED /* < Py2.5 */
-#define PY_WRITE_RESTRICTED WRITE_RESTRICTED
-#endif
-static PyMemberDef __pyx_CyFunction_members[] = {
- {(char *) "__module__", T_OBJECT, offsetof(__pyx_CyFunctionObject, func.m_module), PY_WRITE_RESTRICTED, 0},
- {0, 0, 0, 0, 0}
-};
-static PyObject *
-__Pyx_CyFunction_reduce(__pyx_CyFunctionObject *m, CYTHON_UNUSED PyObject *args)
-{
-#if PY_MAJOR_VERSION >= 3
- return PyUnicode_FromString(m->func.m_ml->ml_name);
-#else
- return PyString_FromString(m->func.m_ml->ml_name);
-#endif
-}
-static PyMethodDef __pyx_CyFunction_methods[] = {
- {__Pyx_NAMESTR("__reduce__"), (PyCFunction)__Pyx_CyFunction_reduce, METH_VARARGS, 0},
- {0, 0, 0, 0}
-};
-static PyObject *__Pyx_CyFunction_New(PyTypeObject *type, PyMethodDef *ml, int flags, PyObject* qualname,
- PyObject *closure, PyObject *module, PyObject* code) {
- __pyx_CyFunctionObject *op = PyObject_GC_New(__pyx_CyFunctionObject, type);
- if (op == NULL)
- return NULL;
- op->flags = flags;
- op->func_weakreflist = NULL;
- op->func.m_ml = ml;
- op->func.m_self = (PyObject *) op;
- Py_XINCREF(closure);
- op->func_closure = closure;
- Py_XINCREF(module);
- op->func.m_module = module;
- op->func_dict = NULL;
- op->func_name = NULL;
- Py_INCREF(qualname);
- op->func_qualname = qualname;
- op->func_doc = NULL;
- op->func_classobj = NULL;
- Py_XINCREF(code);
- op->func_code = code;
- op->defaults_pyobjects = 0;
- op->defaults = NULL;
- op->defaults_tuple = NULL;
- op->defaults_getter = NULL;
- PyObject_GC_Track(op);
- return (PyObject *) op;
-}
-static int
-__Pyx_CyFunction_clear(__pyx_CyFunctionObject *m)
-{
- Py_CLEAR(m->func_closure);
- Py_CLEAR(m->func.m_module);
- Py_CLEAR(m->func_dict);
- Py_CLEAR(m->func_name);
- Py_CLEAR(m->func_qualname);
- Py_CLEAR(m->func_doc);
- Py_CLEAR(m->func_code);
- Py_CLEAR(m->func_classobj);
- Py_CLEAR(m->defaults_tuple);
- if (m->defaults) {
- PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m);
- int i;
- for (i = 0; i < m->defaults_pyobjects; i++)
- Py_XDECREF(pydefaults[i]);
- PyMem_Free(m->defaults);
- m->defaults = NULL;
- }
- return 0;
-}
-static void __Pyx_CyFunction_dealloc(__pyx_CyFunctionObject *m)
-{
- PyObject_GC_UnTrack(m);
- if (m->func_weakreflist != NULL)
- PyObject_ClearWeakRefs((PyObject *) m);
- __Pyx_CyFunction_clear(m);
- PyObject_GC_Del(m);
-}
-static int __Pyx_CyFunction_traverse(__pyx_CyFunctionObject *m, visitproc visit, void *arg)
-{
- Py_VISIT(m->func_closure);
- Py_VISIT(m->func.m_module);
- Py_VISIT(m->func_dict);
- Py_VISIT(m->func_name);
- Py_VISIT(m->func_qualname);
- Py_VISIT(m->func_doc);
- Py_VISIT(m->func_code);
- Py_VISIT(m->func_classobj);
- Py_VISIT(m->defaults_tuple);
- if (m->defaults) {
- PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m);
- int i;
- for (i = 0; i < m->defaults_pyobjects; i++)
- Py_VISIT(pydefaults[i]);
- }
- return 0;
-}
-static PyObject *__Pyx_CyFunction_descr_get(PyObject *func, PyObject *obj, PyObject *type)
-{
- __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
- if (m->flags & __Pyx_CYFUNCTION_STATICMETHOD) {
- Py_INCREF(func);
- return func;
- }
- if (m->flags & __Pyx_CYFUNCTION_CLASSMETHOD) {
- if (type == NULL)
- type = (PyObject *)(Py_TYPE(obj));
- return PyMethod_New(func,
- type, (PyObject *)(Py_TYPE(type)));
- }
- if (obj == Py_None)
- obj = NULL;
- return PyMethod_New(func, obj, type);
-}
-static PyObject*
-__Pyx_CyFunction_repr(__pyx_CyFunctionObject *op)
-{
-#if PY_MAJOR_VERSION >= 3
- return PyUnicode_FromFormat("<cyfunction %U at %p>",
- op->func_qualname, (void *)op);
-#else
- return PyString_FromFormat("<cyfunction %s at %p>",
- PyString_AsString(op->func_qualname), (void *)op);
-#endif
-}
-#if CYTHON_COMPILING_IN_PYPY
-static PyObject * __Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) {
- PyCFunctionObject* f = (PyCFunctionObject*)func;
- PyCFunction meth = PyCFunction_GET_FUNCTION(func);
- PyObject *self = PyCFunction_GET_SELF(func);
- Py_ssize_t size;
- switch (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST)) {
- case METH_VARARGS:
- if (likely(kw == NULL) || PyDict_Size(kw) == 0)
- return (*meth)(self, arg);
- break;
- case METH_VARARGS | METH_KEYWORDS:
- return (*(PyCFunctionWithKeywords)meth)(self, arg, kw);
- case METH_NOARGS:
- if (likely(kw == NULL) || PyDict_Size(kw) == 0) {
- size = PyTuple_GET_SIZE(arg);
- if (size == 0)
- return (*meth)(self, NULL);
- PyErr_Format(PyExc_TypeError,
- "%.200s() takes no arguments (%zd given)",
- f->m_ml->ml_name, size);
- return NULL;
- }
- break;
- case METH_O:
- if (likely(kw == NULL) || PyDict_Size(kw) == 0) {
- size = PyTuple_GET_SIZE(arg);
- if (size == 1)
- return (*meth)(self, PyTuple_GET_ITEM(arg, 0));
- PyErr_Format(PyExc_TypeError,
- "%.200s() takes exactly one argument (%zd given)",
- f->m_ml->ml_name, size);
- return NULL;
- }
- break;
- default:
- PyErr_SetString(PyExc_SystemError, "Bad call flags in "
- "__Pyx_CyFunction_Call. METH_OLDARGS is no "
- "longer supported!");
- return NULL;
- }
- PyErr_Format(PyExc_TypeError, "%.200s() takes no keyword arguments",
- f->m_ml->ml_name);
- return NULL;
-}
-#else
-static PyObject * __Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) {
- return PyCFunction_Call(func, arg, kw);
-}
-#endif
-static PyTypeObject __pyx_CyFunctionType_type = {
- PyVarObject_HEAD_INIT(0, 0)
- __Pyx_NAMESTR("cython_function_or_method"), /*tp_name*/
- sizeof(__pyx_CyFunctionObject), /*tp_basicsize*/
- 0, /*tp_itemsize*/
- (destructor) __Pyx_CyFunction_dealloc, /*tp_dealloc*/
- 0, /*tp_print*/
- 0, /*tp_getattr*/
- 0, /*tp_setattr*/
-#if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
-#else
- 0, /*reserved*/
-#endif
- (reprfunc) __Pyx_CyFunction_repr, /*tp_repr*/
- 0, /*tp_as_number*/
- 0, /*tp_as_sequence*/
- 0, /*tp_as_mapping*/
- 0, /*tp_hash*/
- __Pyx_CyFunction_Call, /*tp_call*/
- 0, /*tp_str*/
- 0, /*tp_getattro*/
- 0, /*tp_setattro*/
- 0, /*tp_as_buffer*/
- Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, /* tp_flags*/
- 0, /*tp_doc*/
- (traverseproc) __Pyx_CyFunction_traverse, /*tp_traverse*/
- (inquiry) __Pyx_CyFunction_clear, /*tp_clear*/
- 0, /*tp_richcompare*/
- offsetof(__pyx_CyFunctionObject, func_weakreflist), /* tp_weaklistoffse */
- 0, /*tp_iter*/
- 0, /*tp_iternext*/
- __pyx_CyFunction_methods, /*tp_methods*/
- __pyx_CyFunction_members, /*tp_members*/
- __pyx_CyFunction_getsets, /*tp_getset*/
- 0, /*tp_base*/
- 0, /*tp_dict*/
- __Pyx_CyFunction_descr_get, /*tp_descr_get*/
- 0, /*tp_descr_set*/
- offsetof(__pyx_CyFunctionObject, func_dict),/*tp_dictoffset*/
- 0, /*tp_init*/
- 0, /*tp_alloc*/
- 0, /*tp_new*/
- 0, /*tp_free*/
- 0, /*tp_is_gc*/
- 0, /*tp_bases*/
- 0, /*tp_mro*/
- 0, /*tp_cache*/
- 0, /*tp_subclasses*/
- 0, /*tp_weaklist*/
- 0, /*tp_del*/
-#if PY_VERSION_HEX >= 0x02060000
- 0, /*tp_version_tag*/
-#endif
-};
-static int __Pyx_CyFunction_init(void) {
-#if !CYTHON_COMPILING_IN_PYPY
- __pyx_CyFunctionType_type.tp_call = PyCFunction_Call;
-#endif
- if (PyType_Ready(&__pyx_CyFunctionType_type) < 0)
- return -1;
- __pyx_CyFunctionType = &__pyx_CyFunctionType_type;
- return 0;
-}
-static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) {
- __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
- m->defaults = PyMem_Malloc(size);
- if (!m->defaults)
- return PyErr_NoMemory();
- memset(m->defaults, 0, sizeof(size));
- m->defaults_pyobjects = pyobjects;
- return m->defaults;
-}
-static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) {
- __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
- m->defaults_tuple = tuple;
- Py_INCREF(tuple);
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5.pyx b/h5py/h5.pyx
index 56a7c66..295bdf4 100644
--- a/h5py/h5.pyx
+++ b/h5py/h5.pyx
@@ -10,6 +10,7 @@
include "config.pxi"
from defs cimport *
+from ._objects import phil, with_phil
ITER_INC = H5_ITER_INC # Increasing order
ITER_DEC = H5_ITER_DEC # Decreasing order
@@ -64,29 +65,31 @@ cdef class H5PYConfig:
"""
def __get__(self):
- import sys
- def handle_val(val):
- if sys.version[0] == '3':
- return val.decode('utf8')
- return val
- return (handle_val(self._r_name), handle_val(self._i_name))
+ with phil:
+ import sys
+ def handle_val(val):
+ if sys.version[0] == '3':
+ return val.decode('utf8')
+ return val
+ return (handle_val(self._r_name), handle_val(self._i_name))
def __set__(self, val):
- def handle_val(val):
- if isinstance(val, unicode):
- return val.encode('utf8')
- elif isinstance(val, bytes):
- return val
- else:
- return bytes(val)
- try:
- if len(val) != 2: raise TypeError()
- r = handle_val(val[0])
- i = handle_val(val[1])
- except Exception:
- raise TypeError("complex_names must be a length-2 sequence of strings (real, img)")
- self._r_name = r
- self._i_name = i
+ with phil:
+ def handle_val(val):
+ if isinstance(val, unicode):
+ return val.encode('utf8')
+ elif isinstance(val, bytes):
+ return val
+ else:
+ return bytes(val)
+ try:
+ if len(val) != 2: raise TypeError()
+ r = handle_val(val[0])
+ i = handle_val(val[1])
+ except Exception:
+ raise TypeError("complex_names must be a length-2 sequence of strings (real, img)")
+ self._r_name = r
+ self._i_name = i
property bool_names:
""" Settable 2-tuple controlling HDF5 ENUM names for boolean types.
@@ -94,24 +97,27 @@ cdef class H5PYConfig:
Format is (false_name, real_name), defaulting to ('FALSE', 'TRUE').
"""
def __get__(self):
- return (self._f_name, self._t_name)
+ with phil:
+ return (self._f_name, self._t_name)
def __set__(self, val):
- try:
- if len(val) != 2: raise TypeError()
- f = str(val[0])
- t = str(val[1])
- except Exception:
- raise TypeError("bool_names must be a length-2 sequence of of names (false, true)")
- self._f_name = f
- self._t_name = t
+ with phil:
+ try:
+ if len(val) != 2: raise TypeError()
+ f = str(val[0])
+ t = str(val[1])
+ except Exception:
+ raise TypeError("bool_names must be a length-2 sequence of of names (false, true)")
+ self._f_name = f
+ self._t_name = t
property read_byte_strings:
""" Returns a context manager which forces all strings to be returned
as byte strings. """
def __get__(self):
- return self._bytestrings
+ with phil:
+ return self._bytestrings
property mpi:
""" Boolean indicating if Parallel HDF5 is available """
@@ -130,6 +136,7 @@ cpdef H5PYConfig get_config():
"""
return cfg
+ at with_phil
def get_libversion():
""" () => TUPLE (major, minor, release)
diff --git a/h5py/h5a.c b/h5py/h5a.c
deleted file mode 100644
index 44136e4..0000000
--- a/h5py/h5a.c
+++ /dev/null
@@ -1,7487 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
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-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
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- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
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- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
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- #define PyBUF_SIMPLE 0
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- #define PyBUF_FORMAT 0x0004
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- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
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-#if PY_MAJOR_VERSION < 3
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- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
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- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
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- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
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- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
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- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
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- #define PyIntObject PyLongObject
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- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
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- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
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-struct __pyx_obj_4h5py_3h5p_PropLAID;
-struct __pyx_obj_4h5py_3h5a_AttrID;
-struct __pyx_opt_args_4h5py_3h5t_py_create;
-
-/* "h5t.pxd":69
- *
- * cpdef TypeID typewrap(hid_t id_)
- * cpdef TypeID py_create(object dtype, bint logical=*) # <<<<<<<<<<<<<<
- *
- *
- */
-struct __pyx_opt_args_4h5py_3h5t_py_create {
- int __pyx_n;
- int logical;
-};
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write;
-
-/* "utils.pxd":17
- * cdef void efree(void* ptr)
- *
- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
- * cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1
- *
- */
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read {
- int __pyx_n;
- hid_t space_id;
-};
-
-/* "utils.pxd":18
- *
- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1
- * cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
- *
- * cdef int convert_tuple(object tuple, hsize_t *dims, hsize_t rank) except -1
- */
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write {
- int __pyx_n;
- hid_t space_id;
-};
-
-/* "h5py/h5a.pyx":214
- * # === Iteration routines ======================================================
- *
- * cdef class _AttrVisitor: # <<<<<<<<<<<<<<
- * cdef object func
- * cdef object retval
- */
-struct __pyx_obj_4h5py_3h5a__AttrVisitor {
- PyObject_HEAD
- PyObject *func;
- PyObject *retval;
-};
-
-
-/* "_objects.pxd":12
- * from defs cimport *
- *
- * cdef class ObjectID: # <<<<<<<<<<<<<<
- *
- * cdef object __weakref__
- */
-struct __pyx_obj_4h5py_8_objects_ObjectID {
- PyObject_HEAD
- PyObject *__weakref__;
- hid_t id;
- int locked;
- PyObject *_hash;
-};
-
-
-/* "h5p.pxd":16
- * # --- Base classes ---
- *
- * cdef class PropID(ObjectID): # <<<<<<<<<<<<<<
- * """ Base class for all property lists """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
-};
-
-
-/* "h5p.pxd":26
- * pass
- *
- * cdef class PropInstanceID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an instance of a property list class (i.e. an actual list
- * which can be passed on to other API functions).
- */
-struct __pyx_obj_4h5py_3h5p_PropInstanceID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5p.pxd":59
- * # --- Object access ---
- *
- * cdef class PropFAID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ File access property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef object py_dtype(self)
- */
-struct __pyx_obj_4h5py_3h5t_TypeID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtab;
-};
-
-
-/* "h5t.pxd":37
- * pass
- *
- * cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":32
- * pass
- *
- * cdef class PropCreateID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Base class for all object creation lists.
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCreateID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5p.pxd":52
- * pass
- *
- * cdef class PropFCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ File creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":20
- * pass
- *
- * cdef class PropClassID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an HDF5 property list class. These can be either (locked)
- * library-defined classes or user-created classes.
- */
-struct __pyx_obj_4h5py_3h5p_PropClassID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
- * cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompoundID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5t.pxd":30
- * pass
- *
- * cdef class TypeVlenID(TypeID): # <<<<<<<<<<<<<<
- * # Non-string vlens
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeVlenID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":44
- * # --- Object creation ---
- *
- * cdef class PropOCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Object creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropOCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":70
- * # --- New in 1.8 ---
- *
- * cdef class PropLCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Link creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropLCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":78
- * cdef char* _buf
- *
- * cdef class PropGCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Group creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropGCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5p.pxd":48
- * pass
- *
- * cdef class PropDCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Dataset creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5t.pxd":34
- * pass
- *
- * cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeTimeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeArrayID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeAtomicID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":51
- * pass
- *
- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeFloatID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":26
- * pass
- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
- * # Both vlen and fixed-len strings
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeStringID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeOpaqueID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":59
- * pass
- *
- * cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
- *
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- */
-struct __pyx_obj_4h5py_3h5t_TypeEnumID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5p.pxd":39
- * pass
- *
- * cdef class PropCopyID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Property list for copying objects (as in h5o.copy) """
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCopyID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeIntegerID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeReferenceID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":63
- * pass
- *
- * cdef class PropDXID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Dataset transfer property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDXID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5s.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class SpaceID(ObjectID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5s_SpaceID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
-};
-
-
-/* "h5py/h5a.pyx":150
- *
- *
- * cdef class AttrInfo: # <<<<<<<<<<<<<<
- *
- * cdef H5A_info_t info
- */
-struct __pyx_obj_4h5py_3h5a_AttrInfo {
- PyObject_HEAD
- H5A_info_t info;
-};
-
-
-/* "h5p.pxd":74
- * pass
- *
- * cdef class PropLAID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Link access property list """
- * cdef char* _buf
- */
-struct __pyx_obj_4h5py_3h5p_PropLAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
- char *_buf;
-};
-
-
-/* "h5py/h5a.pxd":14
- * from _objects cimport ObjectID
- *
- * cdef class AttrID(ObjectID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5a_AttrID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
-};
-
-
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeID {
- PyObject *(*py_dtype)(struct __pyx_obj_4h5py_3h5t_TypeID *);
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtabptr_4h5py_3h5t_TypeID;
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID *__pyx_vtabptr_4h5py_3h5t_TypeCompositeID;
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
- * cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID *__pyx_vtabptr_4h5py_3h5t_TypeCompoundID;
-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID *__pyx_vtabptr_4h5py_3h5t_TypeOpaqueID;
-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID *__pyx_vtabptr_4h5py_3h5t_TypeArrayID;
-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID *__pyx_vtabptr_4h5py_3h5t_TypeAtomicID;
-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID *__pyx_vtabptr_4h5py_3h5t_TypeIntegerID;
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID *__pyx_vtabptr_4h5py_3h5t_TypeReferenceID;
-
-
-/* "h5t.pxd":26
- * pass
- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
- * # Both vlen and fixed-len strings
- * pass
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
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-
-
-/* "h5t.pxd":51
- * pass
- *
- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID __pyx_base;
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-
-
-/* "h5t.pxd":34
- * pass
- *
- * cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
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- *
- * cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
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-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeEnumID {
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-static PyObject *__pyx_pf_4h5py_3h5a_6AttrID_4write(struct __pyx_obj_4h5py_3h5a_AttrID *__pyx_v_self, PyArrayObject *__pyx_v_arr); /* proto */
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-static PyObject *__pyx_pf_4h5py_3h5a_6AttrID_12get_storage_size(struct __pyx_obj_4h5py_3h5a_AttrID *__pyx_v_self); /* proto */
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- /* "h5py/h5a.pyx":1
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- goto __pyx_L0;
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- Py_DECREF(__pyx_m); __pyx_m = 0;
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-/* Runtime support code */
-#if CYTHON_REFNANNY
-static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
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- if (dict != __pyx_b) {
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- if (!result) {
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-
-static void __Pyx_RaiseArgtupleInvalid(
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-{
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- num_expected = num_max;
- more_or_less = "at most";
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- if (exact) {
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- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
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-
-static void __Pyx_RaiseDoubleKeywordsError(
- const char* func_name,
- PyObject* kw_name)
-{
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION >= 3
- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
- #else
- "%s() got multiple values for keyword argument '%s'", func_name,
- PyString_AsString(kw_name));
- #endif
-}
-
-static int __Pyx_ParseOptionalKeywords(
- PyObject *kwds,
- PyObject **argnames[],
- PyObject *kwds2,
- PyObject *values[],
- Py_ssize_t num_pos_args,
- const char* function_name)
-{
- PyObject *key = 0, *value = 0;
- Py_ssize_t pos = 0;
- PyObject*** name;
- PyObject*** first_kw_arg = argnames + num_pos_args;
- while (PyDict_Next(kwds, &pos, &key, &value)) {
- name = first_kw_arg;
- while (*name && (**name != key)) name++;
- if (*name) {
- values[name-argnames] = value;
- continue;
- }
- name = first_kw_arg;
- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
- if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
- break;
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- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
- goto arg_passed_twice;
- }
- argname++;
- }
- }
- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
- if (unlikely(!type)) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (likely(PyObject_TypeCheck(obj, type)))
- return 1;
- PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
- Py_TYPE(obj)->tp_name, type->tp_name);
- return 0;
-}
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
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- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_herr_t(herr_t val) {
- const herr_t neg_one = (herr_t)-1, const_zero = (herr_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(herr_t) == sizeof(char)) ||
- (sizeof(herr_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(herr_t) == sizeof(int)) ||
- (sizeof(herr_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(herr_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(herr_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-static void* __Pyx_GetVtable(PyObject *dict) {
- void* ptr;
- PyObject *ob = PyMapping_GetItemString(dict, (char *)"__pyx_vtable__");
- if (!ob)
- goto bad;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- ptr = PyCapsule_GetPointer(ob, 0);
-#else
- ptr = PyCObject_AsVoidPtr(ob);
-#endif
- if (!ptr && !PyErr_Occurred())
- PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type");
- Py_DECREF(ob);
- return ptr;
-bad:
- Py_XDECREF(ob);
- return NULL;
-}
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5a.pyx b/h5py/h5a.pyx
index 13c0b10..b891a4c 100644
--- a/h5py/h5a.pyx
+++ b/h5py/h5a.pyx
@@ -21,6 +21,7 @@ from utils cimport check_numpy_read, check_numpy_write, emalloc, efree
from _proxy cimport attr_rw
from h5py import _objects
+from ._objects import phil, with_phil
# Initialization
import_array()
@@ -29,6 +30,7 @@ import_array()
# --- create, create_by_name ---
+ at with_phil
def create(ObjectID loc not None, char* name, TypeID tid not None,
SpaceID space not None, *, char* obj_name='.', PropID lapl=None):
"""(ObjectID loc, STRING name, TypeID tid, SpaceID space, **kwds) => AttrID
@@ -42,12 +44,13 @@ def create(ObjectID loc not None, char* name, TypeID tid not None,
Link access property list for obj_name
"""
- return AttrID.open(H5Acreate_by_name(loc.id, obj_name, name, tid.id,
+ return AttrID(H5Acreate_by_name(loc.id, obj_name, name, tid.id,
space.id, H5P_DEFAULT, H5P_DEFAULT, pdefault(lapl)))
# --- open, open_by_name, open_by_idx ---
+ at with_phil
def open(ObjectID loc not None, char* name=NULL, int index=-1, *,
char* obj_name='.', int index_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
PropID lapl=None):
@@ -71,16 +74,17 @@ def open(ObjectID loc not None, char* name=NULL, int index=-1, *,
raise TypeError("Exactly one of name or idx must be specified")
if name != NULL:
- return AttrID.open(H5Aopen_by_name(loc.id, obj_name, name,
+ return AttrID(H5Aopen_by_name(loc.id, obj_name, name,
H5P_DEFAULT, pdefault(lapl)))
else:
- return AttrID.open(H5Aopen_by_idx(loc.id, obj_name,
+ return AttrID(H5Aopen_by_idx(loc.id, obj_name,
<H5_index_t>index_type, <H5_iter_order_t>order, index,
H5P_DEFAULT, pdefault(lapl)))
# --- exists, exists_by_name ---
+ at with_phil
def exists(ObjectID loc not None, char* name, *,
char* obj_name=".", PropID lapl=None):
"""(ObjectID loc, STRING name, **kwds) => BOOL
@@ -98,6 +102,7 @@ def exists(ObjectID loc not None, char* name, *,
# --- rename, rename_by_name ---
+ at with_phil
def rename(ObjectID loc not None, char* name, char* new_name, *,
char* obj_name='.', PropID lapl=None):
"""(ObjectID loc, STRING name, STRING new_name, **kwds)
@@ -113,6 +118,7 @@ def rename(ObjectID loc not None, char* name, char* new_name, *,
H5Arename_by_name(loc.id, obj_name, name, new_name, pdefault(lapl))
+ at with_phil
def delete(ObjectID loc not None, char* name=NULL, int index=-1, *,
char* obj_name='.', int index_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
PropID lapl=None):
@@ -139,6 +145,8 @@ def delete(ObjectID loc not None, char* name=NULL, int index=-1, *,
else:
raise TypeError("Exactly one of index or name must be specified.")
+
+ at with_phil
def get_num_attrs(ObjectID loc not None):
"""(ObjectID loc) => INT
@@ -172,6 +180,7 @@ cdef class AttrInfo:
return hash((self.corder_valid, self.corder, self.cset, self.data_size))
+ at with_phil
def get_info(ObjectID loc not None, char* name=NULL, int index=-1, *,
char* obj_name='.', PropID lapl=None,
int index_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE):
@@ -235,6 +244,7 @@ cdef herr_t cb_attr_simple(hid_t loc_id, char* attr_name, H5A_info_t *ainfo, voi
return 0
+ at with_phil
def iterate(ObjectID loc not None, object func, int index=0, *,
int index_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE, bint info=0):
"""(ObjectID loc, CALLABLE func, INT index=0, **kwds) => <Return value from func>
@@ -299,38 +309,27 @@ cdef class AttrID(ObjectID):
property name:
"""The attribute's name"""
def __get__(self):
- return self.get_name()
+ with phil:
+ return self.get_name()
property shape:
"""A Numpy-style shape tuple representing the attribute's dataspace"""
def __get__(self):
-
cdef SpaceID space
- space = self.get_space()
- return space.get_simple_extent_dims()
+ with phil:
+ space = self.get_space()
+ return space.get_simple_extent_dims()
property dtype:
"""A Numpy-stype dtype object representing the attribute's datatype"""
def __get__(self):
-
cdef TypeID tid
- tid = self.get_type()
- return tid.py_dtype()
-
-
- def _close(self):
- """()
-
- Close this attribute and release resources. You don't need to
- call this manually; attributes are automatically destroyed when
- their Python wrappers are freed.
- """
- with _objects.registry.lock:
- H5Aclose(self.id)
- if not self.valid:
- del _objects.registry[self.id]
-
+ with phil:
+ tid = self.get_type()
+ return tid.py_dtype()
+
+ @with_phil
def read(self, ndarray arr not None):
"""(NDARRAY arr)
@@ -358,6 +357,7 @@ cdef class AttrID(ObjectID):
H5Sclose(space_id)
+ @with_phil
def write(self, ndarray arr not None):
"""(NDARRAY arr)
@@ -384,6 +384,7 @@ cdef class AttrID(ObjectID):
H5Sclose(space_id)
+ @with_phil
def get_name(self):
"""() => STRING name
@@ -405,14 +406,16 @@ cdef class AttrID(ObjectID):
return strout
+ @with_phil
def get_space(self):
"""() => SpaceID
Create and return a copy of the attribute's dataspace.
"""
- return SpaceID.open(H5Aget_space(self.id))
+ return SpaceID(H5Aget_space(self.id))
+ @with_phil
def get_type(self):
"""() => TypeID
@@ -421,6 +424,7 @@ cdef class AttrID(ObjectID):
return typewrap(H5Aget_type(self.id))
+ @with_phil
def get_storage_size(self):
"""() => INT
diff --git a/h5py/h5ac.c b/h5py/h5ac.c
deleted file mode 100644
index 8a328d4..0000000
--- a/h5py/h5ac.c
+++ /dev/null
@@ -1,5137 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
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- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5d.c b/h5py/h5d.c
deleted file mode 100644
index d65295d..0000000
--- a/h5py/h5d.c
+++ /dev/null
@@ -1,6009 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
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-struct __pyx_obj_4h5py_3h5p_PropCreateID;
-struct __pyx_obj_4h5py_3h5p_PropFCID;
-struct __pyx_obj_4h5py_3h5p_PropClassID;
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID;
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-struct __pyx_obj_4h5py_3h5t_TypeFloatID;
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-struct __pyx_obj_4h5py_3h5d_DatasetID;
-struct __pyx_obj_4h5py_3h5s_SpaceID;
-struct __pyx_obj_4h5py_3h5p_PropLAID;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write;
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-/* "utils.pxd":17
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- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
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- */
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- int __pyx_n;
- int logical;
-};
-
-/* "_objects.pxd":12
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- PyObject_HEAD
- PyObject *__weakref__;
- hid_t id;
- int locked;
- PyObject *_hash;
-};
-
-
-/* "h5p.pxd":16
- * # --- Base classes ---
- *
- * cdef class PropID(ObjectID): # <<<<<<<<<<<<<<
- * """ Base class for all property lists """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
-};
-
-
-/* "h5p.pxd":26
- * pass
- *
- * cdef class PropInstanceID(PropID): # <<<<<<<<<<<<<<
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- */
-struct __pyx_obj_4h5py_3h5p_PropInstanceID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5p.pxd":59
- * # --- Object access ---
- *
- * cdef class PropFAID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ File access property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef object py_dtype(self)
- */
-struct __pyx_obj_4h5py_3h5t_TypeID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtab;
-};
-
-
-/* "h5t.pxd":37
- * pass
- *
- * cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":32
- * pass
- *
- * cdef class PropCreateID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Base class for all object creation lists.
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCreateID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5p.pxd":52
- * pass
- *
- * cdef class PropFCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ File creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":20
- * pass
- *
- * cdef class PropClassID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an HDF5 property list class. These can be either (locked)
- * library-defined classes or user-created classes.
- */
-struct __pyx_obj_4h5py_3h5p_PropClassID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
- * cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompoundID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
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- * pass
- *
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- * pass
- */
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":44
- * # --- Object creation ---
- *
- * cdef class PropOCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Object creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropOCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":70
- * # --- New in 1.8 ---
- *
- * cdef class PropLCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Link creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropLCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":78
- * cdef char* _buf
- *
- * cdef class PropGCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Group creation property list """
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-struct __pyx_obj_4h5py_3h5p_PropGCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5p.pxd":48
- * pass
- *
- * cdef class PropDCID(PropOCID): # <<<<<<<<<<<<<<
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- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5t.pxd":34
- * pass
- *
- * cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
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- *
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":51
- * pass
- *
- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
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- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":26
- * pass
- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
- * # Both vlen and fixed-len strings
- * pass
- */
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":59
- * pass
- *
- * cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
- *
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
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-struct __pyx_obj_4h5py_3h5t_TypeEnumID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5p.pxd":39
- * pass
- *
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-struct __pyx_obj_4h5py_3h5p_PropCopyID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
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- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
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- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":63
- * pass
- *
- * cdef class PropDXID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Dataset transfer property list """
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- */
-struct __pyx_obj_4h5py_3h5p_PropDXID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
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-
-
-/* "h5py/h5d.pxd":14
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-
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-
-
-/* "h5p.pxd":74
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- char *_buf;
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-
-
-
-/* "h5t.pxd":14
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-
-
-/* "h5t.pxd":56
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-
-
-/* "h5t.pxd":63
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-
-
-/* "h5t.pxd":23
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-
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-
-
-/* "h5t.pxd":48
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID {
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-
-
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-{
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-{
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- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
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-
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-{
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-
-static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
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- Py_TYPE(obj)->tp_name, type->tp_name);
- return 0;
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-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
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- tstate->exc_type = local_type;
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- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
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-#else
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- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
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-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
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- tmp_tb = tstate->curexc_traceback;
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- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
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-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
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- tstate->curexc_traceback = 0;
-#else
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-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
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- value = NULL;
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- Py_INCREF(value);
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- tb = NULL;
- else {
- Py_INCREF(tb);
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- type = 0;
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- "raise: exception class must be a subclass of BaseException");
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- #endif
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- __Pyx_ErrRestore(type, value, tb);
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-raise_error:
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- goto bad;
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-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
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- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_haddr_t(haddr_t val) {
- const haddr_t neg_one = (haddr_t)-1, const_zero = (haddr_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(haddr_t) == sizeof(char)) ||
- (sizeof(haddr_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(haddr_t) == sizeof(int)) ||
- (sizeof(haddr_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(haddr_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(haddr_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-static void* __Pyx_GetVtable(PyObject *dict) {
- void* ptr;
- PyObject *ob = PyMapping_GetItemString(dict, (char *)"__pyx_vtable__");
- if (!ob)
- goto bad;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- ptr = PyCapsule_GetPointer(ob, 0);
-#else
- ptr = PyCObject_AsVoidPtr(ob);
-#endif
- if (!ptr && !PyErr_Occurred())
- PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type");
- Py_DECREF(ob);
- return ptr;
-bad:
- Py_XDECREF(ob);
- return NULL;
-}
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5d.pyx b/h5py/h5d.pyx
index 79a7e99..b15013b 100644
--- a/h5py/h5d.pyx
+++ b/h5py/h5d.pyx
@@ -21,6 +21,7 @@ from h5p cimport PropID, propwrap
from _proxy cimport dset_rw
from h5py import _objects
+from ._objects import phil, with_phil
# Initialization
import_array()
@@ -51,6 +52,7 @@ FILL_VALUE_USER_DEFINED = H5D_FILL_VALUE_USER_DEFINED
# === Dataset operations ======================================================
+ at with_phil
def create(ObjectID loc not None, object name, TypeID tid not None,
SpaceID space not None, PropID dcpl=None, PropID lcpl=None, PropID dapl = None):
""" (objectID loc, STRING name or None, TypeID tid, SpaceID space,
@@ -70,14 +72,17 @@ def create(ObjectID loc not None, object name, TypeID tid not None,
else:
dsid = H5Dcreate_anon(loc.id, tid.id, space.id,
pdefault(dcpl), pdefault(dapl))
- return DatasetID.open(dsid)
+ return DatasetID(dsid)
-def open(ObjectID loc not None, char* name):
- """ (ObjectID loc, STRING name) => DatasetID
+ at with_phil
+def open(ObjectID loc not None, char* name, PropID dapl=None):
+ """ (ObjectID loc, STRING name, PropID dapl=None) => DatasetID
- Open an existing dataset attached to a group or file object, by name.
+ Open an existing dataset attached to a group or file object, by name.
+
+ If specified, dapl may be a dataset access property list.
"""
- return DatasetID.open(H5Dopen(loc.id, name))
+ return DatasetID(H5Dopen2(loc.id, name, pdefault(dapl)))
# --- Proxy functions for safe(r) threading -----------------------------------
@@ -106,40 +111,31 @@ cdef class DatasetID(ObjectID):
def __get__(self):
# Dataset type can't change
cdef TypeID tid
- if self._dtype is None:
- tid = self.get_type()
- self._dtype = tid.dtype
- return self._dtype
+ with phil:
+ if self._dtype is None:
+ tid = self.get_type()
+ self._dtype = tid.dtype
+ return self._dtype
property shape:
""" Numpy-style shape tuple representing the dataspace """
def __get__(self):
# Shape can change (DatasetID.extend), so don't cache it
cdef SpaceID sid
- sid = self.get_space()
- return sid.get_simple_extent_dims()
+ with phil:
+ sid = self.get_space()
+ return sid.get_simple_extent_dims()
property rank:
""" Integer giving the dataset rank (0 = scalar) """
def __get__(self):
cdef SpaceID sid
- sid = self.get_space()
- return sid.get_simple_extent_ndims()
-
-
- def _close(self):
- """ ()
-
- Terminate access through this identifier. You shouldn't have to
- call this manually; Dataset objects are automatically destroyed
- when their Python wrappers are freed.
- """
- with _objects.registry.lock:
- H5Dclose(self.id)
- if not self.valid:
- del _objects.registry[self.id]
+ with phil:
+ sid = self.get_space()
+ return sid.get_simple_extent_ndims()
+ @with_phil
def read(self, SpaceID mspace not None, SpaceID fspace not None,
ndarray arr_obj not None, TypeID mtype=None,
PropID dxpl=None):
@@ -178,6 +174,8 @@ cdef class DatasetID(ObjectID):
dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 1)
+
+ @with_phil
def write(self, SpaceID mspace not None, SpaceID fspace not None,
ndarray arr_obj not None, TypeID mtype=None,
PropID dxpl=None):
@@ -216,6 +214,8 @@ cdef class DatasetID(ObjectID):
dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 0)
+
+ @with_phil
def extend(self, tuple shape):
""" (TUPLE shape)
@@ -244,6 +244,7 @@ cdef class DatasetID(ObjectID):
H5Sclose(space_id)
+ @with_phil
def set_extent(self, tuple shape):
""" (TUPLE shape)
@@ -272,15 +273,16 @@ cdef class DatasetID(ObjectID):
H5Sclose(space_id)
-
+ @with_phil
def get_space(self):
""" () => SpaceID
Create and return a new copy of the dataspace for this dataset.
"""
- return SpaceID.open(H5Dget_space(self.id))
+ return SpaceID(H5Dget_space(self.id))
+ @with_phil
def get_space_status(self):
""" () => INT space_status_code
@@ -296,6 +298,7 @@ cdef class DatasetID(ObjectID):
return <int>status
+ @with_phil
def get_type(self):
""" () => TypeID
@@ -304,6 +307,7 @@ cdef class DatasetID(ObjectID):
return typewrap(H5Dget_type(self.id))
+ @with_phil
def get_create_plist(self):
""" () => PropDCID
@@ -313,6 +317,16 @@ cdef class DatasetID(ObjectID):
return propwrap(H5Dget_create_plist(self.id))
+ @with_phil
+ def get_access_plist(self):
+ """ () => PropDAID
+
+ Create an return a new copy of the dataset access property list.
+ """
+ return propwrap(H5Dget_access_plist(self.id))
+
+
+ @with_phil
def get_offset(self):
""" () => LONG offset or None
@@ -328,6 +342,7 @@ cdef class DatasetID(ObjectID):
return offset
+ @with_phil
def get_storage_size(self):
""" () => LONG storage_size
diff --git a/h5py/h5ds.c b/h5py/h5ds.c
deleted file mode 100644
index 08cc3c1..0000000
--- a/h5py/h5ds.c
+++ /dev/null
@@ -1,4142 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
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- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5ds.pyx b/h5py/h5ds.pyx
index e94881b..1f612c4 100644
--- a/h5py/h5ds.pyx
+++ b/h5py/h5ds.pyx
@@ -15,7 +15,9 @@
from h5d cimport DatasetID
from utils cimport emalloc, efree
+from ._objects import phil, with_phil
+ at with_phil
def set_scale(DatasetID dset not None, char* dimname=''):
"""(DatasetID dset, STRING dimname)
@@ -23,6 +25,7 @@ def set_scale(DatasetID dset not None, char* dimname=''):
"""
H5DSset_scale(dset.id, dimname)
+ at with_phil
def is_scale(DatasetID dset not None):
"""(DatasetID dset)
@@ -30,24 +33,30 @@ def is_scale(DatasetID dset not None):
"""
return <bint>(H5DSis_scale(dset.id))
+ at with_phil
def attach_scale(DatasetID dset not None, DatasetID dscale not None, unsigned
int idx):
H5DSattach_scale(dset.id, dscale.id, idx)
+ at with_phil
def is_attached(DatasetID dset not None, DatasetID dscale not None,
unsigned int idx):
return <bint>(H5DSis_attached(dset.id, dscale.id, idx))
+ at with_phil
def detach_scale(DatasetID dset not None, DatasetID dscale not None,
unsigned int idx):
H5DSdetach_scale(dset.id, dscale.id, idx)
+ at with_phil
def get_num_scales(DatasetID dset not None, unsigned int dim):
return H5DSget_num_scales(dset.id, dim)
+ at with_phil
def set_label(DatasetID dset not None, unsigned int idx, char* label):
H5DSset_label(dset.id, idx, label)
+ at with_phil
def get_label(DatasetID dset not None, unsigned int idx):
cdef ssize_t size
cdef char* label
@@ -64,6 +73,7 @@ def get_label(DatasetID dset not None, unsigned int idx):
finally:
efree(label)
+ at with_phil
def get_scale_name(DatasetID dscale not None):
cdef ssize_t namelen
cdef char* name = NULL
@@ -97,13 +107,13 @@ cdef herr_t cb_ds_iter(hid_t dset, unsigned int dim, hid_t scale, void* vis_in)
# we did not retrieve the scale identifier using the normal machinery,
# so we need to inc_ref it before using it to create a DatasetID.
H5Iinc_ref(scale)
- vis.retval = vis.func(DatasetID.open(scale))
+ vis.retval = vis.func(DatasetID(scale))
if vis.retval is not None:
return 1
return 0
-
+ at with_phil
def iterate(DatasetID dset not None, unsigned int dim, object func,
int startidx=0):
""" (DatasetID loc, UINT dim, CALLABLE func, UINT startidx=0)
diff --git a/h5py/h5f.c b/h5py/h5f.c
deleted file mode 100644
index 55311eb..0000000
--- a/h5py/h5f.c
+++ /dev/null
@@ -1,6655 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
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-#define __Pyx_PyBytes_FromUString(s) PyBytes_FromString((char*)s)
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-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x);
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-
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-
-static const char *__pyx_f[] = {
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- "_objects.pxd",
- "h5p.pxd",
- "h5t.pxd",
- "h5ac.pxd",
- "numpy.pxd",
-};
-
-/*--- Type declarations ---*/
-struct __pyx_obj_4h5py_8_objects_ObjectID;
-struct __pyx_obj_4h5py_3h5p_PropID;
-struct __pyx_obj_4h5py_3h5p_PropInstanceID;
-struct __pyx_obj_4h5py_3h5p_PropFAID;
-struct __pyx_obj_4h5py_4h5ac_CacheConfig;
-struct __pyx_obj_4h5py_3h5t_TypeID;
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID;
-struct __pyx_obj_4h5py_3h5p_PropCreateID;
-struct __pyx_obj_4h5py_3h5p_PropFCID;
-struct __pyx_obj_4h5py_3h5p_PropClassID;
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID;
-struct __pyx_obj_4h5py_3h5t_TypeCompoundID;
-struct __pyx_obj_4h5py_3h5t_TypeVlenID;
-struct __pyx_obj_4h5py_3h5p_PropOCID;
-struct __pyx_obj_4h5py_3h5p_PropLCID;
-struct __pyx_obj_4h5py_3h5g_GroupID;
-struct __pyx_obj_4h5py_3h5p_PropGCID;
-struct __pyx_obj_4h5py_3h5p_PropDCID;
-struct __pyx_obj_4h5py_3h5t_TypeTimeID;
-struct __pyx_obj_4h5py_3h5t_TypeArrayID;
-struct __pyx_obj_4h5py_3h5t_TypeAtomicID;
-struct __pyx_obj_4h5py_3h5f_FileID;
-struct __pyx_obj_4h5py_3h5t_TypeFloatID;
-struct __pyx_obj_4h5py_3h5t_TypeStringID;
-struct __pyx_obj_4h5py_3h5t_TypeOpaqueID;
-struct __pyx_obj_4h5py_3h5t_TypeEnumID;
-struct __pyx_obj_4h5py_3h5p_PropCopyID;
-struct __pyx_obj_4h5py_3h5t_TypeIntegerID;
-struct __pyx_obj_4h5py_3h5t_TypeReferenceID;
-struct __pyx_obj_4h5py_3h5p_PropDXID;
-struct __pyx_obj_4h5py_3h5p_PropLAID;
-struct __pyx_opt_args_4h5py_3h5t_py_create;
-
-/* "h5t.pxd":69
- *
- * cpdef TypeID typewrap(hid_t id_)
- * cpdef TypeID py_create(object dtype, bint logical=*) # <<<<<<<<<<<<<<
- *
- *
- */
-struct __pyx_opt_args_4h5py_3h5t_py_create {
- int __pyx_n;
- int logical;
-};
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write;
-
-/* "utils.pxd":17
- * cdef void efree(void* ptr)
- *
- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
- * cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1
- *
- */
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read {
- int __pyx_n;
- hid_t space_id;
-};
-
-/* "utils.pxd":18
- *
- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1
- * cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
- *
- * cdef int convert_tuple(object tuple, hsize_t *dims, hsize_t rank) except -1
- */
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write {
- int __pyx_n;
- hid_t space_id;
-};
-
-/* "_objects.pxd":12
- * from defs cimport *
- *
- * cdef class ObjectID: # <<<<<<<<<<<<<<
- *
- * cdef object __weakref__
- */
-struct __pyx_obj_4h5py_8_objects_ObjectID {
- PyObject_HEAD
- PyObject *__weakref__;
- hid_t id;
- int locked;
- PyObject *_hash;
-};
-
-
-/* "h5p.pxd":16
- * # --- Base classes ---
- *
- * cdef class PropID(ObjectID): # <<<<<<<<<<<<<<
- * """ Base class for all property lists """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
-};
-
-
-/* "h5p.pxd":26
- * pass
- *
- * cdef class PropInstanceID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an instance of a property list class (i.e. an actual list
- * which can be passed on to other API functions).
- */
-struct __pyx_obj_4h5py_3h5p_PropInstanceID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5p.pxd":59
- * # --- Object access ---
- *
- * cdef class PropFAID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ File access property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5ac.pxd":12
- * from defs cimport *
- *
- * cdef class CacheConfig: # <<<<<<<<<<<<<<
- * cdef H5AC_cache_config_t cache_config
- */
-struct __pyx_obj_4h5py_4h5ac_CacheConfig {
- PyObject_HEAD
- H5AC_cache_config_t cache_config;
-};
-
-
-/* "h5t.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef object py_dtype(self)
- */
-struct __pyx_obj_4h5py_3h5t_TypeID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtab;
-};
-
-
-/* "h5t.pxd":37
- * pass
- *
- * cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":32
- * pass
- *
- * cdef class PropCreateID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Base class for all object creation lists.
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCreateID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5p.pxd":52
- * pass
- *
- * cdef class PropFCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ File creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":20
- * pass
- *
- * cdef class PropClassID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an HDF5 property list class. These can be either (locked)
- * library-defined classes or user-created classes.
- */
-struct __pyx_obj_4h5py_3h5p_PropClassID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
- * cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompoundID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5t.pxd":30
- * pass
- *
- * cdef class TypeVlenID(TypeID): # <<<<<<<<<<<<<<
- * # Non-string vlens
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeVlenID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5p.pxd":44
- * # --- Object creation ---
- *
- * cdef class PropOCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Object creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropOCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5p.pxd":70
- * # --- New in 1.8 ---
- *
- * cdef class PropLCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Link creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropLCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5g.pxd":14
- * from _objects cimport ObjectID
- *
- * cdef class GroupID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef readonly object links
- */
-struct __pyx_obj_4h5py_3h5g_GroupID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
- PyObject *links;
-};
-
-
-/* "h5p.pxd":78
- * cdef char* _buf
- *
- * cdef class PropGCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Group creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropGCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5p.pxd":48
- * pass
- *
- * cdef class PropDCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Dataset creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5t.pxd":34
- * pass
- *
- * cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeTimeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeArrayID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeAtomicID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5py/h5f.pxd":15
- * from h5g cimport GroupID
- *
- * cdef class FileID(GroupID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5f_FileID {
- struct __pyx_obj_4h5py_3h5g_GroupID __pyx_base;
-};
-
-
-/* "h5t.pxd":51
- * pass
- *
- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeFloatID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":26
- * pass
- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
- * # Both vlen and fixed-len strings
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeStringID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeOpaqueID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":59
- * pass
- *
- * cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
- *
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- */
-struct __pyx_obj_4h5py_3h5t_TypeEnumID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5p.pxd":39
- * pass
- *
- * cdef class PropCopyID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Property list for copying objects (as in h5o.copy) """
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCopyID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeIntegerID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
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-
-
-/* "h5p.pxd":63
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- *
- * cdef class PropDXID(PropInstanceID): # <<<<<<<<<<<<<<
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-
-
-/* "h5p.pxd":74
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-
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-
-/* "h5t.pxd":56
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-
-
-/* "h5t.pxd":63
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-
-
-/* "h5t.pxd":23
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-
-
-/* "h5t.pxd":20
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- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
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-
-
-/* "h5t.pxd":45
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID {
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-
-
-/* "h5t.pxd":48
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-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID {
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-
-
-/* "h5t.pxd":40
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID {
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-
-/* "h5t.pxd":26
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID {
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-
-
-/* "h5t.pxd":51
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- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
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-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID {
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-
-/* "h5t.pxd":34
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeTimeID {
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-
-/* "h5t.pxd":37
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeBitfieldID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
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-static struct __pyx_vtabstruct_4h5py_3h5t_TypeBitfieldID *__pyx_vtabptr_4h5py_3h5t_TypeBitfieldID;
-
-
-/* "h5t.pxd":30
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeVlenID {
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-/* "h5t.pxd":59
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeEnumID {
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- #endif
-}
-
-/* Runtime support code */
-#if CYTHON_REFNANNY
-static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
- PyObject *m = NULL, *p = NULL;
- void *r = NULL;
- m = PyImport_ImportModule((char *)modname);
- if (!m) goto end;
- p = PyObject_GetAttrString(m, (char *)"RefNannyAPI");
- if (!p) goto end;
- r = PyLong_AsVoidPtr(p);
-end:
- Py_XDECREF(p);
- Py_XDECREF(m);
- return (__Pyx_RefNannyAPIStruct *)r;
-}
-#endif /* CYTHON_REFNANNY */
-
-static PyObject *__Pyx_GetName(PyObject *dict, PyObject *name) {
- PyObject *result;
- result = PyObject_GetAttr(dict, name);
- if (!result) {
- if (dict != __pyx_b) {
- PyErr_Clear();
- result = PyObject_GetAttr(__pyx_b, name);
- }
- if (!result) {
- PyErr_SetObject(PyExc_NameError, name);
- }
- }
- return result;
-}
-
-static void __Pyx_RaiseDoubleKeywordsError(
- const char* func_name,
- PyObject* kw_name)
-{
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION >= 3
- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
- #else
- "%s() got multiple values for keyword argument '%s'", func_name,
- PyString_AsString(kw_name));
- #endif
-}
-
-static int __Pyx_ParseOptionalKeywords(
- PyObject *kwds,
- PyObject **argnames[],
- PyObject *kwds2,
- PyObject *values[],
- Py_ssize_t num_pos_args,
- const char* function_name)
-{
- PyObject *key = 0, *value = 0;
- Py_ssize_t pos = 0;
- PyObject*** name;
- PyObject*** first_kw_arg = argnames + num_pos_args;
- while (PyDict_Next(kwds, &pos, &key, &value)) {
- name = first_kw_arg;
- while (*name && (**name != key)) name++;
- if (*name) {
- values[name-argnames] = value;
- continue;
- }
- name = first_kw_arg;
- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
- if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
- goto arg_passed_twice;
- }
- argname++;
- }
- }
- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static void __Pyx_RaiseArgtupleInvalid(
- const char* func_name,
- int exact,
- Py_ssize_t num_min,
- Py_ssize_t num_max,
- Py_ssize_t num_found)
-{
- Py_ssize_t num_expected;
- const char *more_or_less;
- if (num_found < num_min) {
- num_expected = num_min;
- more_or_less = "at least";
- } else {
- num_expected = num_max;
- more_or_less = "at most";
- }
- if (exact) {
- more_or_less = "exactly";
- }
- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
- (num_expected == 1) ? "" : "s", num_found);
-}
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hssize_t(hssize_t val) {
- const hssize_t neg_one = (hssize_t)-1, const_zero = (hssize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hssize_t) == sizeof(char)) ||
- (sizeof(hssize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hssize_t) == sizeof(int)) ||
- (sizeof(hssize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hssize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hssize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-static void* __Pyx_GetVtable(PyObject *dict) {
- void* ptr;
- PyObject *ob = PyMapping_GetItemString(dict, (char *)"__pyx_vtable__");
- if (!ob)
- goto bad;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- ptr = PyCapsule_GetPointer(ob, 0);
-#else
- ptr = PyCObject_AsVoidPtr(ob);
-#endif
- if (!ptr && !PyErr_Occurred())
- PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type");
- Py_DECREF(ob);
- return ptr;
-bad:
- Py_XDECREF(ob);
- return NULL;
-}
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5f.pyx b/h5py/h5f.pyx
index 5d23b64..0e3dad6 100644
--- a/h5py/h5f.pyx
+++ b/h5py/h5f.pyx
@@ -22,6 +22,7 @@ from h5ac cimport CacheConfig
from utils cimport emalloc, efree
from h5py import _objects
+from ._objects import phil, with_phil
import h5fd
# Initialization
@@ -54,7 +55,7 @@ LIBVER_LATEST = H5F_LIBVER_LATEST
# === File operations =========================================================
-
+ at with_phil
def open(char* name, unsigned int flags=H5F_ACC_RDWR, PropFAID fapl=None):
"""(STRING name, UINT flags=ACC_RDWR, PropFAID fapl=None) => FileID
@@ -68,9 +69,10 @@ def open(char* name, unsigned int flags=H5F_ACC_RDWR, PropFAID fapl=None):
Keyword fapl may be a file access property list.
"""
- return FileID.open(H5Fopen(name, flags, pdefault(fapl)))
+ return FileID(H5Fopen(name, flags, pdefault(fapl)))
+ at with_phil
def create(char* name, int flags=H5F_ACC_TRUNC, PropFCID fcpl=None,
PropFAID fapl=None):
"""(STRING name, INT flags=ACC_TRUNC, PropFCID fcpl=None,
@@ -87,9 +89,10 @@ def create(char* name, int flags=H5F_ACC_TRUNC, PropFCID fcpl=None,
To keep the behavior in line with that of Python's built-in functions,
the default is ACC_TRUNC. Be careful!
"""
- return FileID.open(H5Fcreate(name, flags, pdefault(fcpl), pdefault(fapl)))
+ return FileID(H5Fcreate(name, flags, pdefault(fcpl), pdefault(fapl)))
+ at with_phil
def flush(ObjectID obj not None, int scope=H5F_SCOPE_LOCAL):
"""(ObjectID obj, INT scope=SCOPE_LOCAL)
@@ -106,6 +109,7 @@ def flush(ObjectID obj not None, int scope=H5F_SCOPE_LOCAL):
H5Fflush(obj.id, <H5F_scope_t>scope)
+ at with_phil
def is_hdf5(char* name):
"""(STRING name) => BOOL
@@ -115,6 +119,7 @@ def is_hdf5(char* name):
return <bint>(H5Fis_hdf5(name))
+ at with_phil
def mount(ObjectID loc not None, char* name, FileID fid not None):
"""(ObjectID loc, STRING name, FileID fid)
@@ -124,6 +129,7 @@ def mount(ObjectID loc not None, char* name, FileID fid not None):
H5Fmount(loc.id, name, fid.id, H5P_DEFAULT)
+ at with_phil
def unmount(ObjectID loc not None, char* name):
"""(ObjectID loc, STRING name)
@@ -132,6 +138,7 @@ def unmount(ObjectID loc not None, char* name):
H5Funmount(loc.id, name)
+ at with_phil
def get_name(ObjectID obj not None):
"""(ObjectID obj) => STRING
@@ -152,6 +159,7 @@ def get_name(ObjectID obj not None):
efree(name)
+ at with_phil
def get_obj_count(object where=OBJ_ALL, int types=H5F_OBJ_ALL):
"""(OBJECT where=OBJ_ALL, types=OBJ_ALL) => INT
@@ -180,6 +188,7 @@ def get_obj_count(object where=OBJ_ALL, int types=H5F_OBJ_ALL):
return H5Fget_obj_count(where_id, types)
+ at with_phil
def get_obj_ids(object where=OBJ_ALL, int types=H5F_OBJ_ALL):
"""(OBJECT where=OBJ_ALL, types=OBJ_ALL) => LIST
@@ -215,11 +224,13 @@ def get_obj_ids(object where=OBJ_ALL, int types=H5F_OBJ_ALL):
count = H5Fget_obj_count(where_id, types)
obj_list = <hid_t*>emalloc(sizeof(hid_t)*count)
- H5Fget_obj_ids(where_id, types, count, obj_list)
- for i from 0<=i<count:
- py_obj_list.append(wrap_identifier(obj_list[i]))
- # The HDF5 function returns a borrowed reference for each hid_t.
- #H5Iinc_ref(obj_list[i])
+ if count > 0: # HDF5 complains that obj_list is NULL, even if count==0
+ H5Fget_obj_ids(where_id, types, count, obj_list)
+ for i from 0<=i<count:
+ py_obj_list.append(wrap_identifier(obj_list[i]))
+ # The HDF5 function returns a borrowed reference for each hid_t.
+ H5Iinc_ref(obj_list[i])
+
return py_obj_list
finally:
@@ -250,14 +261,11 @@ cdef class FileID(GroupID):
property name:
""" File name on disk (according to h5f.get_name()) """
def __get__(self):
- return get_name(self)
-
-
- def __cinit__(self, id):
- # lock the id proxy for as long as the the identifier is open
- self.locked = True
+ with phil:
+ return get_name(self)
+ @with_phil
def close(self):
"""()
@@ -266,12 +274,11 @@ cdef class FileID(GroupID):
physical file might not be closed until all remaining open
identifiers are freed.
"""
- with _objects.registry.lock:
- self.locked = False
- H5Fclose(self.id)
- _objects.registry.cleanup()
+ self._close()
+ _objects.nonlocal_close()
+ @with_phil
def reopen(self):
"""() => FileID
@@ -279,9 +286,10 @@ cdef class FileID(GroupID):
The new identifier is guaranteed to neither be mounted nor contain
a mounted file.
"""
- return FileID.open(H5Freopen(self.id))
+ return FileID(H5Freopen(self.id))
+ @with_phil
def get_filesize(self):
"""() => LONG size
@@ -293,6 +301,7 @@ cdef class FileID(GroupID):
return size
+ @with_phil
def get_create_plist(self):
"""() => PropFCID
@@ -302,6 +311,7 @@ cdef class FileID(GroupID):
return propwrap(H5Fget_create_plist(self.id))
+ @with_phil
def get_access_plist(self):
"""() => PropFAID
@@ -311,6 +321,7 @@ cdef class FileID(GroupID):
return propwrap(H5Fget_access_plist(self.id))
+ @with_phil
def get_freespace(self):
"""() => LONG freespace
@@ -320,6 +331,7 @@ cdef class FileID(GroupID):
return H5Fget_freespace(self.id)
+ @with_phil
def get_intent(self):
""" () => INT
@@ -332,6 +344,7 @@ cdef class FileID(GroupID):
return mode
+ @with_phil
def get_vfd_handle(self):
""" () => INT
@@ -348,6 +361,7 @@ cdef class FileID(GroupID):
IF MPI and HDF5_VERSION >= (1, 8, 9):
+ @with_phil
def set_mpi_atomicity(self, bint atomicity):
""" (BOOL atomicity)
@@ -361,6 +375,7 @@ cdef class FileID(GroupID):
H5Fset_mpi_atomicity(self.id, <hbool_t>atomicity)
+ @with_phil
def get_mpi_atomicity(self):
""" () => BOOL
@@ -373,6 +388,8 @@ cdef class FileID(GroupID):
H5Fget_mpi_atomicity(self.id, &atom)
return <bint>atom
+
+ @with_phil
def get_mdc_hit_rate(self):
"""() => DOUBLE
@@ -383,6 +400,8 @@ cdef class FileID(GroupID):
H5Fget_mdc_hit_rate(self.id, &hit_rate)
return hit_rate
+
+ @with_phil
def get_mdc_size(self):
"""() => (max_size, min_clean_size, cur_size, cur_num_entries) [SIZE_T, SIZE_T, SIZE_T, INT]
@@ -399,6 +418,8 @@ cdef class FileID(GroupID):
return (max_size, min_clean_size, cur_size, cur_num_entries)
+
+ @with_phil
def reset_mdc_hit_rate_stats(self):
"""no return
@@ -407,6 +428,8 @@ cdef class FileID(GroupID):
"""
H5Freset_mdc_hit_rate_stats(self.id)
+
+ @with_phil
def get_mdc_config(self):
"""() => CacheConfig
Returns an object that stores all the information about the meta-data cache
@@ -419,6 +442,7 @@ cdef class FileID(GroupID):
return config
+ @with_phil
def set_mdc_config(self, CacheConfig config not None):
"""(CacheConfig) => None
Returns an object that stores all the information about the meta-data cache
diff --git a/h5py/h5fd.c b/h5py/h5fd.c
deleted file mode 100644
index f0a1ff3..0000000
--- a/h5py/h5fd.c
+++ /dev/null
@@ -1,1910 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
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- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5fd.pxd b/h5py/h5fd.pxd
index 75a1668..37d64ba 100644
--- a/h5py/h5fd.pxd
+++ b/h5py/h5fd.pxd
@@ -33,7 +33,7 @@ cdef extern from "hdf5.h":
# hid_t H5FD_GASS not in 1.8.X
hid_t H5FD_LOG
hid_t H5FD_MPIO
- hid_t H5FD_MPIPOSIX
+# hid_t H5FD_MPIPOSIX removed in 1.8.13
hid_t H5FD_MULTI
hid_t H5FD_SEC2
hid_t H5FD_STDIO
diff --git a/h5py/h5fd.pyx b/h5py/h5fd.pyx
index 8e69af8..735dc27 100644
--- a/h5py/h5fd.pyx
+++ b/h5py/h5fd.pyx
@@ -31,7 +31,7 @@ CORE = H5FD_CORE
FAMILY = H5FD_FAMILY
LOG = H5FD_LOG
MPIO = H5FD_MPIO
-MPIPOSIX = H5FD_MPIPOSIX
+MPIPOSIX = -1
MULTI = H5FD_MULTI
SEC2 = H5FD_SEC2
STDIO = H5FD_STDIO
diff --git a/h5py/h5g.c b/h5py/h5g.c
deleted file mode 100644
index 03d5fcc..0000000
--- a/h5py/h5g.c
+++ /dev/null
@@ -1,7629 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
- #define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
-#endif
-#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
- #define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
- #define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
-#else
- #define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
- #define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_DelSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice deletion", (obj)->ob_type->tp_name), -1)))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
-#else
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_NAMESTR(n) ((char *)(n))
- #define __Pyx_DOCSTR(n) ((char *)(n))
-#else
- #define __Pyx_NAMESTR(n) (n)
- #define __Pyx_DOCSTR(n) (n)
-#endif
-
-
-#if PY_MAJOR_VERSION >= 3
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
-#else
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
-#endif
-
-#ifndef __PYX_EXTERN_C
- #ifdef __cplusplus
- #define __PYX_EXTERN_C extern "C"
- #else
- #define __PYX_EXTERN_C extern
- #endif
-#endif
-
-#if defined(WIN32) || defined(MS_WINDOWS)
-#define _USE_MATH_DEFINES
-#endif
-#include <math.h>
-#define __PYX_HAVE__h5py__h5g
-#define __PYX_HAVE_API__h5py__h5g
-#include "stdlib.h"
-#include "string.h"
-#include "time.h"
-#include "unistd.h"
-#include "stdint.h"
-#include "api_compat.h"
-#include "lzf_filter.h"
-#include "hdf5.h"
-#include "H5Cpublic.h"
-#include "hdf5_hl.h"
-#include "numpy/arrayobject.h"
-#ifdef _OPENMP
-#include <omp.h>
-#endif /* _OPENMP */
-
-#ifdef PYREX_WITHOUT_ASSERTIONS
-#define CYTHON_WITHOUT_ASSERTIONS
-#endif
-
-#ifndef CYTHON_INLINE
- #if defined(__GNUC__)
- #define CYTHON_INLINE __inline__
- #elif defined(_MSC_VER)
- #define CYTHON_INLINE __inline
- #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
- #define CYTHON_INLINE inline
- #else
- #define CYTHON_INLINE
- #endif
-#endif
-#ifndef CYTHON_UNUSED
-# if defined(__GNUC__)
-# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
-# define CYTHON_UNUSED __attribute__ ((__unused__))
-# else
-# define CYTHON_UNUSED
-# endif
-# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER))
-# define CYTHON_UNUSED __attribute__ ((__unused__))
-# else
-# define CYTHON_UNUSED
-# endif
-#endif
-typedef struct {PyObject **p; char *s; const long n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; /*proto*/
-
-#define __Pyx_PyBytes_FromUString(s) PyBytes_FromString((char*)s)
-#define __Pyx_PyBytes_AsUString(s) ((unsigned char*) PyBytes_AsString(s))
-#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None)
-#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False))
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*);
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x);
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- 0, /*tp_del*/
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*tp_version_tag*/
- #endif
-};
-
-static PyObject *__pyx_tp_new_4h5py_3h5g_GroupStat(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
- PyObject *o = (*t->tp_alloc)(t, 0);
- if (!o) return 0;
- return o;
-}
-
-static void __pyx_tp_dealloc_4h5py_3h5g_GroupStat(PyObject *o) {
- (*Py_TYPE(o)->tp_free)(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_fileno(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_6fileno_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_objno(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_5objno_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_nlink(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_5nlink_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_type(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_4type_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_mtime(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_5mtime_1__get__(o);
-}
-
-static PyObject *__pyx_getprop_4h5py_3h5g_9GroupStat_linklen(PyObject *o, CYTHON_UNUSED void *x) {
- return __pyx_pw_4h5py_3h5g_9GroupStat_7linklen_1__get__(o);
-}
-
-static PyMethodDef __pyx_methods_4h5py_3h5g_GroupStat[] = {
- {__Pyx_NAMESTR("_hash"), (PyCFunction)__pyx_pw_4h5py_3h5g_9GroupStat_1_hash, METH_NOARGS, __Pyx_DOCSTR(0)},
- {0, 0, 0, 0}
-};
-
-static struct PyGetSetDef __pyx_getsets_4h5py_3h5g_GroupStat[] = {
- {(char *)"fileno", __pyx_getprop_4h5py_3h5g_9GroupStat_fileno, 0, 0, 0},
- {(char *)"objno", __pyx_getprop_4h5py_3h5g_9GroupStat_objno, 0, 0, 0},
- {(char *)"nlink", __pyx_getprop_4h5py_3h5g_9GroupStat_nlink, 0, 0, 0},
- {(char *)"type", __pyx_getprop_4h5py_3h5g_9GroupStat_type, 0, 0, 0},
- {(char *)"mtime", __pyx_getprop_4h5py_3h5g_9GroupStat_mtime, 0, 0, 0},
- {(char *)"linklen", __pyx_getprop_4h5py_3h5g_9GroupStat_linklen, 0, 0, 0},
- {0, 0, 0, 0, 0}
-};
-
-static PyNumberMethods __pyx_tp_as_number_GroupStat = {
- 0, /*nb_add*/
- 0, /*nb_subtract*/
- 0, /*nb_multiply*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_divide*/
- #endif
- 0, /*nb_remainder*/
- 0, /*nb_divmod*/
- 0, /*nb_power*/
- 0, /*nb_negative*/
- 0, /*nb_positive*/
- 0, /*nb_absolute*/
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- 0, /*nb_xor*/
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- #if PY_MAJOR_VERSION < 3
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- 0, /*nb_int*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_long*/
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- 0, /*reserved*/
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- 0, /*nb_float*/
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_oct*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*nb_hex*/
- #endif
- 0, /*nb_inplace_add*/
- 0, /*nb_inplace_subtract*/
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- #if PY_MAJOR_VERSION < 3
- 0, /*nb_inplace_divide*/
- #endif
- 0, /*nb_inplace_remainder*/
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- 0, /*nb_inplace_lshift*/
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- 0, /*nb_inplace_and*/
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- 0, /*nb_inplace_or*/
- 0, /*nb_floor_divide*/
- 0, /*nb_true_divide*/
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- 0, /*nb_inplace_true_divide*/
- #if PY_VERSION_HEX >= 0x02050000
- 0, /*nb_index*/
- #endif
-};
-
-static PySequenceMethods __pyx_tp_as_sequence_GroupStat = {
- 0, /*sq_length*/
- 0, /*sq_concat*/
- 0, /*sq_repeat*/
- 0, /*sq_item*/
- 0, /*sq_slice*/
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- 0, /*sq_inplace_concat*/
- 0, /*sq_inplace_repeat*/
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-
-static PyMappingMethods __pyx_tp_as_mapping_GroupStat = {
- 0, /*mp_length*/
- 0, /*mp_subscript*/
- 0, /*mp_ass_subscript*/
-};
-
-static PyBufferProcs __pyx_tp_as_buffer_GroupStat = {
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getreadbuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getwritebuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getsegcount*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getcharbuffer*/
- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_getbuffer*/
- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_releasebuffer*/
- #endif
-};
-
-static PyTypeObject __pyx_type_4h5py_3h5g_GroupStat = {
- PyVarObject_HEAD_INIT(0, 0)
- __Pyx_NAMESTR("h5py.h5g.GroupStat"), /*tp_name*/
- sizeof(struct __pyx_obj_4h5py_3h5g_GroupStat), /*tp_basicsize*/
- 0, /*tp_itemsize*/
- __pyx_tp_dealloc_4h5py_3h5g_GroupStat, /*tp_dealloc*/
- 0, /*tp_print*/
- 0, /*tp_getattr*/
- 0, /*tp_setattr*/
- #if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
- #else
- 0, /*reserved*/
- #endif
- 0, /*tp_repr*/
- &__pyx_tp_as_number_GroupStat, /*tp_as_number*/
- &__pyx_tp_as_sequence_GroupStat, /*tp_as_sequence*/
- &__pyx_tp_as_mapping_GroupStat, /*tp_as_mapping*/
- 0, /*tp_hash*/
- 0, /*tp_call*/
- 0, /*tp_str*/
- 0, /*tp_getattro*/
- 0, /*tp_setattro*/
- &__pyx_tp_as_buffer_GroupStat, /*tp_as_buffer*/
- Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/
- __Pyx_DOCSTR("Represents the H5G_stat_t structure containing group member info.\n\n Fields (read-only):\n\n * fileno: 2-tuple uniquely identifying the current file\n * objno: 2-tuple uniquely identifying this object\n * nlink: Number of hard links to this object\n * mtime: Modification time of this object\n * linklen: Length of the symbolic link name, or 0 if not a link.\n\n \"Uniquely identifying\" means unique among currently open files,\n not univ [...]
- 0, /*tp_traverse*/
- 0, /*tp_clear*/
- 0, /*tp_richcompare*/
- 0, /*tp_weaklistoffset*/
- 0, /*tp_iter*/
- 0, /*tp_iternext*/
- __pyx_methods_4h5py_3h5g_GroupStat, /*tp_methods*/
- 0, /*tp_members*/
- __pyx_getsets_4h5py_3h5g_GroupStat, /*tp_getset*/
- 0, /*tp_base*/
- 0, /*tp_dict*/
- 0, /*tp_descr_get*/
- 0, /*tp_descr_set*/
- 0, /*tp_dictoffset*/
- 0, /*tp_init*/
- 0, /*tp_alloc*/
- __pyx_tp_new_4h5py_3h5g_GroupStat, /*tp_new*/
- 0, /*tp_free*/
- 0, /*tp_is_gc*/
- 0, /*tp_bases*/
- 0, /*tp_mro*/
- 0, /*tp_cache*/
- 0, /*tp_subclasses*/
- 0, /*tp_weaklist*/
- 0, /*tp_del*/
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*tp_version_tag*/
- #endif
-};
-
-static PyObject *__pyx_tp_new_4h5py_3h5g_GroupIter(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
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- PyObject *o = (*t->tp_alloc)(t, 0);
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- return o;
-}
-
-static void __pyx_tp_dealloc_4h5py_3h5g_GroupIter(PyObject *o) {
- struct __pyx_obj_4h5py_3h5g_GroupIter *p = (struct __pyx_obj_4h5py_3h5g_GroupIter *)o;
- PyObject_GC_UnTrack(o);
- Py_CLEAR(p->grp);
- Py_CLEAR(p->names);
- PyObject_GC_Track(o);
- (*Py_TYPE(o)->tp_free)(o);
-}
-
-static int __pyx_tp_traverse_4h5py_3h5g_GroupIter(PyObject *o, visitproc v, void *a) {
- int e;
- struct __pyx_obj_4h5py_3h5g_GroupIter *p = (struct __pyx_obj_4h5py_3h5g_GroupIter *)o;
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- }
- return 0;
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-static int __pyx_tp_clear_4h5py_3h5g_GroupIter(PyObject *o) {
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- PyObject* tmp;
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-}
-
-static PyMethodDef __pyx_methods_4h5py_3h5g_GroupIter[] = {
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-static PyNumberMethods __pyx_tp_as_number_GroupIter = {
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- #if PY_MAJOR_VERSION < 3
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- #endif
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- #if PY_VERSION_HEX >= 0x02050000
- 0, /*nb_index*/
- #endif
-};
-
-static PySequenceMethods __pyx_tp_as_sequence_GroupIter = {
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- 0, /*sq_slice*/
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-
-static PyMappingMethods __pyx_tp_as_mapping_GroupIter = {
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- 0, /*mp_ass_subscript*/
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-
-static PyBufferProcs __pyx_tp_as_buffer_GroupIter = {
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getreadbuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
- 0, /*bf_getwritebuffer*/
- #endif
- #if PY_MAJOR_VERSION < 3
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- #endif
- #if PY_MAJOR_VERSION < 3
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- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_getbuffer*/
- #endif
- #if PY_VERSION_HEX >= 0x02060000
- 0, /*bf_releasebuffer*/
- #endif
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-static PyTypeObject __pyx_type_4h5py_3h5g_GroupIter = {
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- 0, /*tp_itemsize*/
- __pyx_tp_dealloc_4h5py_3h5g_GroupIter, /*tp_dealloc*/
- 0, /*tp_print*/
- 0, /*tp_getattr*/
- 0, /*tp_setattr*/
- #if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
- #else
- 0, /*reserved*/
- #endif
- 0, /*tp_repr*/
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- &__pyx_tp_as_sequence_GroupIter, /*tp_as_sequence*/
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- 0, /*tp_str*/
- 0, /*tp_getattro*/
- 0, /*tp_setattro*/
- &__pyx_tp_as_buffer_GroupIter, /*tp_as_buffer*/
- Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
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- __pyx_tp_traverse_4h5py_3h5g_GroupIter, /*tp_traverse*/
- __pyx_tp_clear_4h5py_3h5g_GroupIter, /*tp_clear*/
- 0, /*tp_richcompare*/
- 0, /*tp_weaklistoffset*/
- __pyx_pw_4h5py_3h5g_9GroupIter_3__iter__, /*tp_iter*/
- __pyx_pw_4h5py_3h5g_9GroupIter_5__next__, /*tp_iternext*/
- __pyx_methods_4h5py_3h5g_GroupIter, /*tp_methods*/
- 0, /*tp_members*/
- 0, /*tp_getset*/
- 0, /*tp_base*/
- 0, /*tp_dict*/
- 0, /*tp_descr_get*/
- 0, /*tp_descr_set*/
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- __pyx_pw_4h5py_3h5g_9GroupIter_1__init__, /*tp_init*/
- 0, /*tp_alloc*/
- __pyx_tp_new_4h5py_3h5g_GroupIter, /*tp_new*/
- 0, /*tp_free*/
- 0, /*tp_is_gc*/
- 0, /*tp_bases*/
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- 0, /*tp_subclasses*/
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- #if PY_VERSION_HEX >= 0x02060000
- 0, /*tp_version_tag*/
- #endif
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- if (!o) return 0;
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- p->func = Py_None; Py_INCREF(Py_None);
- p->retval = Py_None; Py_INCREF(Py_None);
- return o;
-}
-
-static void __pyx_tp_dealloc_4h5py_3h5g__GroupVisitor(PyObject *o) {
- struct __pyx_obj_4h5py_3h5g__GroupVisitor *p = (struct __pyx_obj_4h5py_3h5g__GroupVisitor *)o;
- PyObject_GC_UnTrack(o);
- Py_CLEAR(p->func);
- Py_CLEAR(p->retval);
- PyObject_GC_Track(o);
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-}
-
-static int __pyx_tp_traverse_4h5py_3h5g__GroupVisitor(PyObject *o, visitproc v, void *a) {
- int e;
- struct __pyx_obj_4h5py_3h5g__GroupVisitor *p = (struct __pyx_obj_4h5py_3h5g__GroupVisitor *)o;
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- }
- return 0;
-}
-
-static int __pyx_tp_clear_4h5py_3h5g__GroupVisitor(PyObject *o) {
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- PyObject* tmp;
- tmp = ((PyObject*)p->func);
- p->func = Py_None; Py_INCREF(Py_None);
- Py_XDECREF(tmp);
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- Py_XDECREF(tmp);
- return 0;
-}
-
-static PyMethodDef __pyx_methods_4h5py_3h5g__GroupVisitor[] = {
- {0, 0, 0, 0}
-};
-
-static PyNumberMethods __pyx_tp_as_number__GroupVisitor = {
- 0, /*nb_add*/
- 0, /*nb_subtract*/
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- #if PY_MAJOR_VERSION < 3
- 0, /*nb_divide*/
- #endif
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- #if PY_MAJOR_VERSION < 3
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- 0, /*nb_index*/
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-
-static PySequenceMethods __pyx_tp_as_sequence__GroupVisitor = {
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- 0, /*bf_releasebuffer*/
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-static PyTypeObject __pyx_type_4h5py_3h5g__GroupVisitor = {
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- __pyx_tp_dealloc_4h5py_3h5g__GroupVisitor, /*tp_dealloc*/
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- #if PY_MAJOR_VERSION < 3
- 0, /*tp_compare*/
- #else
- 0, /*reserved*/
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- 0, /*tp_repr*/
- &__pyx_tp_as_number__GroupVisitor, /*tp_as_number*/
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- &__pyx_tp_as_mapping__GroupVisitor, /*tp_as_mapping*/
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-{
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- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static CYTHON_INLINE hsize_t __Pyx_PyInt_from_py_hsize_t(PyObject* x) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hsize_t) == sizeof(char)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hsize_t) == sizeof(short)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hsize_t) == sizeof(int)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hsize_t) == sizeof(long)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hsize_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hsize_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_time_t(time_t val) {
- const time_t neg_one = (time_t)-1, const_zero = (time_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(time_t) == sizeof(char)) ||
- (sizeof(time_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(time_t) == sizeof(int)) ||
- (sizeof(time_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(time_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(time_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5g.pyx b/h5py/h5g.pyx
index 293dfe8..9a7880c 100644
--- a/h5py/h5g.pyx
+++ b/h5py/h5g.pyx
@@ -11,6 +11,8 @@
Low-level HDF5 "H5G" group interface.
"""
+include "config.pxi"
+
# Compile-time imports
from _objects cimport pdefault
from utils cimport emalloc, efree
@@ -19,6 +21,7 @@ cimport _hdf5 # to implement container testing for 1.6
from _errors cimport set_error_handler, err_cookie
from h5py import _objects
+from ._objects import phil, with_phil
# === Public constants and data structures ====================================
@@ -117,16 +120,19 @@ cdef class GroupIter:
return retval
-# === Basic group management ==================================================
+# === Basic group management ==================================================
+ at with_phil
def open(ObjectID loc not None, char* name):
"""(ObjectID loc, STRING name) => GroupID
Open an existing HDF5 group, attached to some other group.
"""
- return GroupID.open(H5Gopen(loc.id, name))
+ return GroupID(H5Gopen(loc.id, name))
+
+ at with_phil
def create(ObjectID loc not None, object name, PropID lcpl=None,
PropID gcpl=None):
"""(ObjectID loc, STRING name or None, PropLCID lcpl=None,
@@ -146,7 +152,7 @@ def create(ObjectID loc not None, object name, PropID lcpl=None,
else:
gid = H5Gcreate_anon(loc.id, pdefault(gcpl), H5P_DEFAULT)
- return GroupID.open(gid)
+ return GroupID(gid)
cdef class _GroupVisitor:
@@ -169,6 +175,7 @@ cdef herr_t cb_group_iter(hid_t gid, char *name, void* vis_in) except 2:
return 0
+ at with_phil
def iterate(GroupID loc not None, object func, int startidx=0, *,
char* obj_name='.'):
""" (GroupID loc, CALLABLE func, UINT startidx=0, **kwds)
@@ -196,6 +203,7 @@ def iterate(GroupID loc not None, object func, int startidx=0, *,
return vis.retval
+ at with_phil
def get_objinfo(ObjectID obj not None, object name=b'.', int follow_link=1):
"""(ObjectID obj, STRING name='.', BOOL follow_link=True) => GroupStat object
@@ -217,6 +225,7 @@ def get_objinfo(ObjectID obj not None, object name=b'.', int follow_link=1):
return statobj
+
# === Group member management =================================================
cdef class GroupID(ObjectID):
@@ -244,23 +253,12 @@ cdef class GroupID(ObjectID):
"""
def __init__(self, hid_t id_):
- import h5l
- self.links = h5l.LinkProxy(id_)
-
-
- def _close(self):
- """()
-
- Terminate access through this identifier. You shouldn't have to
- call this manually; group identifiers are automatically released
- when their Python wrappers are freed.
- """
- with _objects.registry.lock:
- H5Gclose(self.id)
- if not self.valid:
- del _objects.registry[self.id]
+ with phil:
+ import h5l
+ self.links = h5l.LinkProxy(id_)
+ @with_phil
def link(self, char* current_name, char* new_name,
int link_type=H5G_LINK_HARD, GroupID remote=None):
"""(STRING current_name, STRING new_name, INT link_type=LINK_HARD,
@@ -287,6 +285,7 @@ cdef class GroupID(ObjectID):
H5Glink2(self.id, current_name, <H5G_link_t>link_type, remote_id, new_name)
+ @with_phil
def unlink(self, char* name):
"""(STRING name)
@@ -295,6 +294,7 @@ cdef class GroupID(ObjectID):
H5Gunlink(self.id, name)
+ @with_phil
def move(self, char* current_name, char* new_name, GroupID remote=None):
"""(STRING current_name, STRING new_name, GroupID remote=None)
@@ -311,6 +311,7 @@ cdef class GroupID(ObjectID):
H5Gmove2(self.id, current_name, remote_id, new_name)
+ @with_phil
def get_num_objs(self):
"""() => INT number_of_objects
@@ -321,6 +322,7 @@ cdef class GroupID(ObjectID):
return size
+ @with_phil
def get_objname_by_idx(self, hsize_t idx):
"""(INT idx) => STRING
@@ -341,6 +343,7 @@ cdef class GroupID(ObjectID):
efree(buf)
+ @with_phil
def get_objtype_by_idx(self, hsize_t idx):
"""(INT idx) => INT object_type_code
@@ -355,6 +358,7 @@ cdef class GroupID(ObjectID):
return <int>H5Gget_objtype_by_idx(self.id, idx)
+ @with_phil
def get_linkval(self, char* name):
"""(STRING name) => STRING link_value
@@ -384,6 +388,7 @@ cdef class GroupID(ObjectID):
efree(value)
+ @with_phil
def set_comment(self, char* name, char* comment):
"""(STRING name, STRING comment)
@@ -392,6 +397,7 @@ cdef class GroupID(ObjectID):
H5Gset_comment(self.id, name, comment)
+ @with_phil
def get_comment(self, char* name):
"""(STRING name) => STRING comment
@@ -412,10 +418,10 @@ cdef class GroupID(ObjectID):
finally:
efree(cmnt)
- # === Special methods =====================================================
+ # === Special methods =====================================================
- def __contains__(self, char* name):
+ def __contains__(self, name):
"""(STRING name)
Determine if a group member of the given name is present
@@ -427,20 +433,102 @@ cdef class GroupID(ObjectID):
new_handler.func = NULL
new_handler.data = NULL
- old_handler = set_error_handler(new_handler)
- retval = _hdf5.H5Gget_objinfo(self.id, name, 0, NULL)
- set_error_handler(old_handler)
-
- return bool(retval >= 0)
+ if not self:
+ return False
+ IF HDF5_VERSION >= (1, 8, 5):
+ # New system is more robust but requires H5Oexists_by_name
+ with phil:
+ return _path_valid(self, name)
+ ELSE:
+ with phil:
+ old_handler = set_error_handler(new_handler)
+ retval = _hdf5.H5Gget_objinfo(self.id, name, 0, NULL)
+ set_error_handler(old_handler)
+ return bool(retval >= 0)
def __iter__(self):
""" Return an iterator over the names of group members. """
- return GroupIter(self)
+ with phil:
+ return GroupIter(self)
def __len__(self):
""" Number of group members """
cdef hsize_t size
- H5Gget_num_objs(self.id, &size)
- return size
+ with phil:
+ H5Gget_num_objs(self.id, &size)
+ return size
+
+
+IF HDF5_VERSION >= (1, 8, 5):
+ @with_phil
+ def _path_valid(GroupID grp not None, object path not None, PropID lapl=None):
+ """ Determine if *path* points to an object in the file.
+
+ If *path* represents an external or soft link, the link's validity is not
+ checked.
+ """
+ import h5o
+
+ if isinstance(path, bytes):
+ path = path.decode('utf-8')
+ else:
+ path = unicode(path)
+
+ # Empty names are not allowed by HDF5
+ if len(path) == 0:
+ return False
+
+ # Note: we cannot use pp.normpath as it resolves ".." components,
+ # which don't exist in HDF5
+
+ path_parts = path.split('/')
+
+ # Absolute path (started with slash)
+ if path_parts[0] == '':
+ current_loc = h5o.open(grp, b'/', lapl=lapl)
+ else:
+ current_loc = grp
+
+ # HDF5 ignores duplicate or trailing slashes
+ path_parts = [x for x in path_parts if x != '']
+
+ # Special case: path was entirely composed of slashes!
+ if len(path_parts) == 0:
+ path_parts = ['.'] # i.e. the root group
+
+ path_parts = [x.encode('utf-8') for x in path_parts]
+ nparts = len(path_parts)
+
+ for idx, p in enumerate(path_parts):
+
+ # Special case; '.' always refers to the present group
+ if p == b'.':
+ continue
+
+ # Is there any kind of link by that name in this group?
+ if not current_loc.links.exists(p, lapl=lapl):
+ return False
+
+ # If we're at the last link in the chain, we're done.
+ # We don't check to see if the last part points to a valid object;
+ # it's enough that it exists.
+ if idx == nparts - 1:
+ return True
+
+ # Otherwise, does the link point to a real object?
+ if not h5o.exists_by_name(current_loc, p, lapl=lapl):
+ return False
+
+ # Is that object a group?
+ next_loc = h5o.open(current_loc, p, lapl=lapl)
+ info = h5o.get_info(next_loc)
+ if info.type != H5O_TYPE_GROUP:
+ return False
+
+ # Go into that group
+ current_loc = next_loc
+
+ return True
+
diff --git a/h5py/h5i.c b/h5py/h5i.c
deleted file mode 100644
index f1d9fad..0000000
--- a/h5py/h5i.c
+++ /dev/null
@@ -1,3566 +0,0 @@
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- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5i.pyx b/h5py/h5i.pyx
index 528a86c..8ad0e2c 100644
--- a/h5py/h5i.pyx
+++ b/h5py/h5i.pyx
@@ -11,6 +11,9 @@
Identifier interface for object inspection.
"""
+from ._objects import phil, with_phil
+
+
# === Public constants and data structures ====================================
BADID = H5I_BADID
@@ -32,16 +35,16 @@ cpdef ObjectID wrap_identifier(hid_t ident):
typecode = H5Iget_type(ident)
if typecode == H5I_FILE:
import h5f
- obj = h5f.FileID.open(ident)
+ obj = h5f.FileID(ident)
elif typecode == H5I_DATASET:
import h5d
- obj = h5d.DatasetID.open(ident)
+ obj = h5d.DatasetID(ident)
elif typecode == H5I_GROUP:
import h5g
- obj = h5g.GroupID.open(ident)
+ obj = h5g.GroupID(ident)
elif typecode == H5I_ATTR:
import h5a
- obj = h5a.AttrID.open(ident)
+ obj = h5a.AttrID(ident)
elif typecode == H5I_DATATYPE:
import h5t
obj = h5t.typewrap(ident)
@@ -53,9 +56,10 @@ cpdef ObjectID wrap_identifier(hid_t ident):
return obj
-# === Identifier API ==========================================================
+# === Identifier API ==========================================================
+ at with_phil
def get_type(ObjectID obj not None):
""" (ObjectID obj) => INT type_code
@@ -66,6 +70,7 @@ def get_type(ObjectID obj not None):
return <int>H5Iget_type(obj.id)
+ at with_phil
def get_name(ObjectID obj not None):
""" (ObjectID obj) => STRING name, or None
@@ -98,6 +103,7 @@ def get_name(ObjectID obj not None):
free(name)
+ at with_phil
def get_file_id(ObjectID obj not None):
""" (ObjectID obj) => FileID
@@ -106,11 +112,10 @@ def get_file_id(ObjectID obj not None):
import h5f
cdef hid_t fid
fid = H5Iget_file_id(obj.id)
- if H5Iget_ref(fid) > 1:
- H5Idec_ref(fid)
- return h5f.FileID.open(fid)
+ return h5f.FileID(fid)
+ at with_phil
def inc_ref(ObjectID obj not None):
""" (ObjectID obj)
@@ -123,6 +128,7 @@ def inc_ref(ObjectID obj not None):
H5Iinc_ref(obj.id)
+ at with_phil
def get_ref(ObjectID obj not None):
""" (ObjectID obj) => INT
@@ -131,6 +137,7 @@ def get_ref(ObjectID obj not None):
return H5Iget_ref(obj.id)
+ at with_phil
def dec_ref(ObjectID obj not None):
""" (ObjectID obj)
diff --git a/h5py/h5l.c b/h5py/h5l.c
deleted file mode 100644
index 0962b0e..0000000
--- a/h5py/h5l.c
+++ /dev/null
@@ -1,5584 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
- #define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
-#endif
-#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
- #define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
- #define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
-#else
- #define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
- #define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_DelSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice deletion", (obj)->ob_type->tp_name), -1)))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
-#endif
-#if PY_VERSION_HEX < 0x02050000
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- goto __pyx_L0;
- __pyx_L1_error:;
- __Pyx_XDECREF(__pyx_t_1);
- __Pyx_XDECREF(__pyx_t_2);
- __Pyx_XDECREF(__pyx_t_3);
- __Pyx_XDECREF(__pyx_t_4);
- if (__pyx_m) {
- __Pyx_AddTraceback("init h5py.h5l", __pyx_clineno, __pyx_lineno, __pyx_filename);
- Py_DECREF(__pyx_m); __pyx_m = 0;
- } else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_ImportError, "init h5py.h5l");
- }
- __pyx_L0:;
- __Pyx_RefNannyFinishContext();
- #if PY_MAJOR_VERSION < 3
- return;
- #else
- return __pyx_m;
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-}
-
-/* Runtime support code */
-#if CYTHON_REFNANNY
-static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
- PyObject *m = NULL, *p = NULL;
- void *r = NULL;
- m = PyImport_ImportModule((char *)modname);
- if (!m) goto end;
- p = PyObject_GetAttrString(m, (char *)"RefNannyAPI");
- if (!p) goto end;
- r = PyLong_AsVoidPtr(p);
-end:
- Py_XDECREF(p);
- Py_XDECREF(m);
- return (__Pyx_RefNannyAPIStruct *)r;
-}
-#endif /* CYTHON_REFNANNY */
-
-static PyObject *__Pyx_GetName(PyObject *dict, PyObject *name) {
- PyObject *result;
- result = PyObject_GetAttr(dict, name);
- if (!result) {
- if (dict != __pyx_b) {
- PyErr_Clear();
- result = PyObject_GetAttr(__pyx_b, name);
- }
- if (!result) {
- PyErr_SetObject(PyExc_NameError, name);
- }
- }
- return result;
-}
-
-static void __Pyx_RaiseDoubleKeywordsError(
- const char* func_name,
- PyObject* kw_name)
-{
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION >= 3
- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
- #else
- "%s() got multiple values for keyword argument '%s'", func_name,
- PyString_AsString(kw_name));
- #endif
-}
-
-static int __Pyx_ParseOptionalKeywords(
- PyObject *kwds,
- PyObject **argnames[],
- PyObject *kwds2,
- PyObject *values[],
- Py_ssize_t num_pos_args,
- const char* function_name)
-{
- PyObject *key = 0, *value = 0;
- Py_ssize_t pos = 0;
- PyObject*** name;
- PyObject*** first_kw_arg = argnames + num_pos_args;
- while (PyDict_Next(kwds, &pos, &key, &value)) {
- name = first_kw_arg;
- while (*name && (**name != key)) name++;
- if (*name) {
- values[name-argnames] = value;
- continue;
- }
- name = first_kw_arg;
- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
- if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
- goto arg_passed_twice;
- }
- argname++;
- }
- }
- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static void __Pyx_RaiseArgtupleInvalid(
- const char* func_name,
- int exact,
- Py_ssize_t num_min,
- Py_ssize_t num_max,
- Py_ssize_t num_found)
-{
- Py_ssize_t num_expected;
- const char *more_or_less;
- if (num_found < num_min) {
- num_expected = num_min;
- more_or_less = "at least";
- } else {
- num_expected = num_max;
- more_or_less = "at most";
- }
- if (exact) {
- more_or_less = "exactly";
- }
- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
- (num_expected == 1) ? "" : "s", num_found);
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static CYTHON_INLINE hsize_t __Pyx_PyInt_from_py_hsize_t(PyObject* x) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hsize_t) == sizeof(char)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hsize_t) == sizeof(short)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hsize_t) == sizeof(int)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hsize_t) == sizeof(long)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hsize_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hsize_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_int64_t(int64_t val) {
- const int64_t neg_one = (int64_t)-1, const_zero = (int64_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(int64_t) == sizeof(char)) ||
- (sizeof(int64_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(int64_t) == sizeof(int)) ||
- (sizeof(int64_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(int64_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(int64_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_haddr_t(haddr_t val) {
- const haddr_t neg_one = (haddr_t)-1, const_zero = (haddr_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(haddr_t) == sizeof(char)) ||
- (sizeof(haddr_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(haddr_t) == sizeof(int)) ||
- (sizeof(haddr_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(haddr_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(haddr_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5l.pyx b/h5py/h5l.pyx
index bbef23f..d8ab7a8 100644
--- a/h5py/h5l.pyx
+++ b/h5py/h5l.pyx
@@ -17,6 +17,9 @@ from h5p cimport PropID
from h5g cimport GroupID
from utils cimport emalloc, efree
+from ._objects import phil, with_phil
+
+
# === Public constants ========================================================
TYPE_HARD = H5L_TYPE_HARD
@@ -101,6 +104,8 @@ cdef class LinkProxy:
* Hashable: No
* Equality: Undefined
+
+ You will note that this class does *not* inherit from ObjectID.
"""
def __init__(self, hid_t id_):
@@ -116,6 +121,7 @@ cdef class LinkProxy:
raise TypeError("Link proxies are unhashable; use the parent group instead.")
+ @with_phil
def create_hard(self, char* new_name, GroupID cur_loc not None,
char* cur_name, PropID lcpl=None, PropID lapl=None):
""" (STRING new_name, GroupID cur_loc, STRING cur_name,
@@ -128,6 +134,7 @@ cdef class LinkProxy:
pdefault(lcpl), pdefault(lapl))
+ @with_phil
def create_soft(self, char* new_name, char* target,
PropID lcpl=None, PropID lapl=None):
"""(STRING new_name, STRING target, PropID lcpl=None, PropID lapl=None)
@@ -139,6 +146,7 @@ cdef class LinkProxy:
pdefault(lcpl), pdefault(lapl))
+ @with_phil
def create_external(self, char* link_name, char* file_name, char* obj_name,
PropID lcpl=None, PropID lapl=None):
"""(STRING link_name, STRING file_name, STRING obj_name,
@@ -150,6 +158,7 @@ cdef class LinkProxy:
pdefault(lcpl), pdefault(lapl))
+ @with_phil
def get_val(self, char* name, PropID lapl=None):
"""(STRING name, PropLAID lapl=None) => STRING or TUPLE(file, obj)
@@ -183,6 +192,7 @@ cdef class LinkProxy:
return py_retval
+ @with_phil
def move(self, char* src_name, GroupID dst_loc not None, char* dst_name,
PropID lcpl=None, PropID lapl=None):
""" (STRING src_name, GroupID dst_loc, STRING dst_name)
@@ -193,14 +203,16 @@ cdef class LinkProxy:
pdefault(lapl))
- def exists(self, char* name):
- """ (STRING name) => BOOL
+ @with_phil
+ def exists(self, char* name, PropID lapl=None):
+ """ (STRING name, PropID lapl=None) => BOOL
Check if a link of the specified name exists in this group.
"""
- return <bint>(H5Lexists(self.id, name, H5P_DEFAULT))
+ return <bint>(H5Lexists(self.id, name, pdefault(lapl)))
+ @with_phil
def get_info(self, char* name, int index=-1, *, PropID lapl=None):
"""(STRING name=, INT index=, **kwds) => LinkInfo instance
@@ -213,6 +225,7 @@ cdef class LinkProxy:
return info
+ @with_phil
def visit(self, object func, *,
int idx_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
char* obj_name='.', PropID lapl=None, bint info=0):
@@ -256,6 +269,8 @@ cdef class LinkProxy:
return it.retval
+
+ @with_phil
def iterate(self, object func, *,
int idx_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
char* obj_name='.', PropID lapl=None, bint info=0,
diff --git a/h5py/h5o.c b/h5py/h5o.c
deleted file mode 100644
index f827cdf..0000000
--- a/h5py/h5o.c
+++ /dev/null
@@ -1,7518 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
- #define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
-#endif
-#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
- #define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
- #define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
-#else
- #define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
- #define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_DelSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice deletion", (obj)->ob_type->tp_name), -1)))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
-#else
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_NAMESTR(n) ((char *)(n))
- #define __Pyx_DOCSTR(n) ((char *)(n))
-#else
- #define __Pyx_NAMESTR(n) (n)
- #define __Pyx_DOCSTR(n) (n)
-#endif
-
-
-#if PY_MAJOR_VERSION >= 3
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
-#else
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
-#endif
-
-#ifndef __PYX_EXTERN_C
- #ifdef __cplusplus
- #define __PYX_EXTERN_C extern "C"
- #else
- #define __PYX_EXTERN_C extern
- #endif
-#endif
-
-#if defined(WIN32) || defined(MS_WINDOWS)
-#define _USE_MATH_DEFINES
-#endif
-#include <math.h>
-#define __PYX_HAVE__h5py__h5o
-#define __PYX_HAVE_API__h5py__h5o
-#include "stdlib.h"
-#include "string.h"
-#include "time.h"
-#include "unistd.h"
-#include "stdint.h"
-#include "api_compat.h"
-#include "lzf_filter.h"
-#include "hdf5.h"
-#include "H5Cpublic.h"
-#include "hdf5_hl.h"
-#include "numpy/arrayobject.h"
-#ifdef _OPENMP
-#include <omp.h>
-#endif /* _OPENMP */
-
-#ifdef PYREX_WITHOUT_ASSERTIONS
-#define CYTHON_WITHOUT_ASSERTIONS
-#endif
-
-#ifndef CYTHON_INLINE
- #if defined(__GNUC__)
- #define CYTHON_INLINE __inline__
- #elif defined(_MSC_VER)
- #define CYTHON_INLINE __inline
- #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
- #define CYTHON_INLINE inline
- #else
- #define CYTHON_INLINE
- #endif
-#endif
-#ifndef CYTHON_UNUSED
-# if defined(__GNUC__)
-# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
-# define CYTHON_UNUSED __attribute__ ((__unused__))
-# else
-# define CYTHON_UNUSED
-# endif
-# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER))
-# define CYTHON_UNUSED __attribute__ ((__unused__))
-# else
-# define CYTHON_UNUSED
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- #if PY_MAJOR_VERSION < 3
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- #if PY_MAJOR_VERSION < 3
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-
-static PySequenceMethods __pyx_tp_as_sequence__OHdrMesg = {
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-
-static PyMappingMethods __pyx_tp_as_mapping__OHdrMesg = {
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- 0, /*mp_subscript*/
- 0, /*mp_ass_subscript*/
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-
-static PyBufferProcs __pyx_tp_as_buffer__OHdrMesg = {
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-static PyTypeObject __pyx_type_4h5py_3h5o__OHdrMesg = {
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- __pyx_tp_dealloc_4h5py_3h5o__ObjInfoBase, /*tp_dealloc*/
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-static PyObject *__pyx_getprop_4h5py_3h5o_10_OHdrSpace_total(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyObject *__pyx_getprop_4h5py_3h5o_10_OHdrSpace_meta(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyObject *__pyx_getprop_4h5py_3h5o_10_OHdrSpace_mesg(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyObject *__pyx_getprop_4h5py_3h5o_10_OHdrSpace_free(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyBufferProcs __pyx_tp_as_buffer__OHdrSpace = {
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-static PyTypeObject __pyx_type_4h5py_3h5o__OHdrSpace = {
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-static PyObject *__pyx_tp_new_4h5py_3h5o__OHdr(PyTypeObject *t, PyObject *a, PyObject *k) {
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-static void __pyx_tp_dealloc_4h5py_3h5o__OHdr(PyObject *o) {
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-static int __pyx_tp_traverse_4h5py_3h5o__OHdr(PyObject *o, visitproc v, void *a) {
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-static int __pyx_tp_clear_4h5py_3h5o__OHdr(PyObject *o) {
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-static PyObject *__pyx_getprop_4h5py_3h5o_5_OHdr_nmesgs(PyObject *o, CYTHON_UNUSED void *x) {
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-static PyObject *__pyx_getprop_4h5py_3h5o_5_OHdr_space(PyObject *o, CYTHON_UNUSED void *x) {
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- while (*name && (**name != key)) name++;
- if (*name) {
- values[name-argnames] = value;
- continue;
- }
- name = first_kw_arg;
- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
- if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
- goto arg_passed_twice;
- }
- argname++;
- }
- }
- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_haddr_t(haddr_t val) {
- const haddr_t neg_one = (haddr_t)-1, const_zero = (haddr_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(haddr_t) == sizeof(char)) ||
- (sizeof(haddr_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(haddr_t) == sizeof(int)) ||
- (sizeof(haddr_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(haddr_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(haddr_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5o.pyx b/h5py/h5o.pyx
index 95aa2fe..f0e5289 100644
--- a/h5py/h5o.pyx
+++ b/h5py/h5o.pyx
@@ -11,6 +11,8 @@
Module for HDF5 "H5O" functions.
"""
+include 'config.pxi'
+
# Pyrex compile-time imports
from _objects cimport ObjectID, pdefault
from h5g cimport GroupID
@@ -18,6 +20,9 @@ from h5i cimport wrap_identifier
from h5p cimport PropID
from utils cimport emalloc, efree
+from ._objects import phil, with_phil
+
+
# === Public constants ========================================================
TYPE_GROUP = H5O_TYPE_GROUP
@@ -128,6 +133,7 @@ cdef class ObjInfo(_ObjInfo):
return newcopy
+ at with_phil
def get_info(ObjectID loc not None, char* name=NULL, int index=-1, *,
char* obj_name='.', int index_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
PropID lapl=None):
@@ -162,9 +168,20 @@ def get_info(ObjectID loc not None, char* name=NULL, int index=-1, *,
return info
-# === General object operations ===============================================
+IF HDF5_VERSION >= (1, 8, 5):
+ @with_phil
+ def exists_by_name(ObjectID loc not None, char *name, PropID lapl=None):
+ """ (ObjectID loc, STRING name, PropID lapl=None) => BOOL exists
+
+ Determines whether a link resolves to an actual object.
+ """
+ return <bint>H5Oexists_by_name(loc.id, name, pdefault(lapl))
+
+# === General object operations ===============================================
+
+ at with_phil
def open(ObjectID loc not None, char* name, PropID lapl=None):
"""(ObjectID loc, STRING name, PropID lapl=None) => ObjectID
@@ -173,6 +190,7 @@ def open(ObjectID loc not None, char* name, PropID lapl=None):
return wrap_identifier(H5Oopen(loc.id, name, pdefault(lapl)))
+ at with_phil
def link(ObjectID obj not None, GroupID loc not None, char* name,
PropID lcpl=None, PropID lapl=None):
"""(ObjectID obj, GroupID loc, STRING name, PropID lcpl=None,
@@ -184,6 +202,7 @@ def link(ObjectID obj not None, GroupID loc not None, char* name,
H5Olink(obj.id, loc.id, name, pdefault(lcpl), pdefault(lapl))
+ at with_phil
def copy(ObjectID src_loc not None, char* src_name, GroupID dst_loc not None,
char* dst_name, PropID copypl=None, PropID lcpl=None):
"""(ObjectID src_loc, STRING src_name, GroupID dst_loc, STRING dst_name,
@@ -199,6 +218,7 @@ def copy(ObjectID src_loc not None, char* src_name, GroupID dst_loc not None,
pdefault(lcpl))
+ at with_phil
def set_comment(ObjectID loc not None, char* comment, *, char* obj_name=".",
PropID lapl=None):
"""(ObjectID loc, STRING comment, **kwds)
@@ -214,7 +234,7 @@ def set_comment(ObjectID loc not None, char* comment, *, char* obj_name=".",
H5Oset_comment_by_name(loc.id, obj_name, comment, pdefault(lapl))
-
+ at with_phil
def get_comment(ObjectID loc not None, char* comment, *, char* obj_name=".",
PropID lapl=None):
"""(ObjectID loc, STRING comment, **kwds)
@@ -240,6 +260,7 @@ def get_comment(ObjectID loc not None, char* comment, *, char* obj_name=".",
return pstring
+
# === Visit routines ==========================================================
cdef class _ObjectVisitor:
@@ -285,6 +306,7 @@ cdef herr_t cb_obj_simple(hid_t obj, char* name, H5O_info_t *info, void* data) e
return 0
+ at with_phil
def visit(ObjectID loc not None, object func, *,
int idx_type=H5_INDEX_NAME, int order=H5_ITER_NATIVE,
char* obj_name=".", PropID lapl=None, bint info=0):
diff --git a/h5py/h5p.c b/h5py/h5p.c
deleted file mode 100644
index 1f31a3a..0000000
--- a/h5py/h5p.c
+++ /dev/null
@@ -1,13550 +0,0 @@
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-
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-/*--- Type declarations ---*/
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-struct __pyx_obj_4h5py_3h5p_PropInstanceID;
-struct __pyx_obj_4h5py_3h5p_PropFAID;
-struct __pyx_obj_4h5py_4h5ac_CacheConfig;
-struct __pyx_obj_4h5py_3h5t_TypeID;
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID;
-struct __pyx_obj_4h5py_3h5p_PropCreateID;
-struct __pyx_obj_4h5py_3h5p_PropFCID;
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-struct __pyx_obj_4h5py_3h5p_PropOCID;
-struct __pyx_obj_4h5py_3h5p_PropLCID;
-struct __pyx_obj_4h5py_3h5p_PropGCID;
-struct __pyx_obj_4h5py_3h5p_PropDCID;
-struct __pyx_obj_4h5py_3h5t_TypeTimeID;
-struct __pyx_obj_4h5py_3h5t_TypeArrayID;
-struct __pyx_obj_4h5py_3h5t_TypeAtomicID;
-struct __pyx_obj_4h5py_3h5t_TypeFloatID;
-struct __pyx_obj_4h5py_3h5p_PropDAID;
-struct __pyx_obj_4h5py_3h5t_TypeStringID;
-struct __pyx_obj_4h5py_3h5t_TypeOpaqueID;
-struct __pyx_obj_4h5py_3h5t_TypeEnumID;
-struct __pyx_obj_4h5py_3h5p_PropCopyID;
-struct __pyx_obj_4h5py_3h5t_TypeIntegerID;
-struct __pyx_obj_4h5py_3h5t_TypeReferenceID;
-struct __pyx_obj_4h5py_3h5p_PropDXID;
-struct __pyx_obj_4h5py_3h5p_PropLAID;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_read;
-struct __pyx_opt_args_4h5py_5utils_check_numpy_write;
-
-/* "utils.pxd":17
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- * cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
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- int __pyx_n;
- int logical;
-};
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- * cdef object __weakref__
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- PyObject *__weakref__;
- hid_t id;
- int locked;
- PyObject *_hash;
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-
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- */
-struct __pyx_obj_4h5py_3h5p_PropID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
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-
-
-/* "h5py/h5p.pxd":26
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- *
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- * """ Represents an instance of a property list class (i.e. an actual list
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- */
-struct __pyx_obj_4h5py_3h5p_PropInstanceID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
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-
-
-/* "h5py/h5p.pxd":59
- * # --- Object access ---
- *
- * cdef class PropFAID(PropInstanceID): # <<<<<<<<<<<<<<
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- */
-struct __pyx_obj_4h5py_3h5p_PropFAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5ac.pxd":12
- * from defs cimport *
- *
- * cdef class CacheConfig: # <<<<<<<<<<<<<<
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- */
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- H5AC_cache_config_t cache_config;
-};
-
-
-/* "h5t.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef object py_dtype(self)
- */
-struct __pyx_obj_4h5py_3h5t_TypeID {
- struct __pyx_obj_4h5py_8_objects_ObjectID __pyx_base;
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtab;
-};
-
-
-/* "h5t.pxd":37
- * pass
- *
- * cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeBitfieldID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":32
- * pass
- *
- * cdef class PropCreateID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Base class for all object creation lists.
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCreateID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":52
- * pass
- *
- * cdef class PropFCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ File creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropFCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":20
- * pass
- *
- * cdef class PropClassID(PropID): # <<<<<<<<<<<<<<
- * """ Represents an HDF5 property list class. These can be either (locked)
- * library-defined classes or user-created classes.
- */
-struct __pyx_obj_4h5py_3h5p_PropClassID {
- struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
-};
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompositeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
- * cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeCompoundID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5t.pxd":30
- * pass
- *
- * cdef class TypeVlenID(TypeID): # <<<<<<<<<<<<<<
- * # Non-string vlens
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeVlenID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":44
- * # --- Object creation ---
- *
- * cdef class PropOCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Object creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropOCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":70
- * # --- New in 1.8 ---
- *
- * cdef class PropLCID(PropCreateID): # <<<<<<<<<<<<<<
- * """ Link creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropLCID {
- struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":78
- * cdef char* _buf
- *
- * cdef class PropGCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Group creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropGCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":48
- * pass
- *
- * cdef class PropDCID(PropOCID): # <<<<<<<<<<<<<<
- * """ Dataset creation property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDCID {
- struct __pyx_obj_4h5py_3h5p_PropOCID __pyx_base;
-};
-
-
-/* "h5t.pxd":34
- * pass
- *
- * cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeTimeID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeArrayID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeAtomicID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":51
- * pass
- *
- * cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeFloatID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5py/h5p.pyx":1165
- *
- * # Dataset access
- * cdef class PropDAID(PropInstanceID): # <<<<<<<<<<<<<<
- *
- * """ Dataset access property list """
- */
-struct __pyx_obj_4h5py_3h5p_PropDAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":26
- * pass
- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
- * # Both vlen and fixed-len strings
- * pass
- */
-struct __pyx_obj_4h5py_3h5t_TypeStringID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeOpaqueID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5t.pxd":59
- * pass
- *
- * cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
- *
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- */
-struct __pyx_obj_4h5py_3h5t_TypeEnumID {
- struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":39
- * pass
- *
- * cdef class PropCopyID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Property list for copying objects (as in h5o.copy) """
- *
- */
-struct __pyx_obj_4h5py_3h5p_PropCopyID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeIntegerID {
- struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-struct __pyx_obj_4h5py_3h5t_TypeReferenceID {
- struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":63
- * pass
- *
- * cdef class PropDXID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Dataset transfer property list """
- * pass
- */
-struct __pyx_obj_4h5py_3h5p_PropDXID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
-};
-
-
-/* "h5py/h5p.pxd":74
- * pass
- *
- * cdef class PropLAID(PropInstanceID): # <<<<<<<<<<<<<<
- * """ Link access property list """
- * cdef char* _buf
- */
-struct __pyx_obj_4h5py_3h5p_PropLAID {
- struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
- char *_buf;
-};
-
-
-
-/* "h5t.pxd":14
- * from _objects cimport class ObjectID
- *
- * cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
- *
- * cdef object py_dtype(self)
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeID {
- PyObject *(*py_dtype)(struct __pyx_obj_4h5py_3h5t_TypeID *);
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtabptr_4h5py_3h5t_TypeID;
-
-
-/* "h5t.pxd":56
- * # --- Enums & compound types ---
- *
- * cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID *__pyx_vtabptr_4h5py_3h5t_TypeCompositeID;
-
-
-/* "h5t.pxd":63
- * cdef int enum_convert(self, long long *buf, int reverse) except -1
- *
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-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID __pyx_base;
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-
-
-/* "h5t.pxd":23
- * pass
- *
- * cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
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-
-
-/* "h5t.pxd":20
- * # --- Top-level classes ---
- *
- * cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
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-
-
-/* "h5t.pxd":45
- * # --- Numeric atomic types ---
- *
- * cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
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- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
-};
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-
-
-/* "h5t.pxd":48
- * pass
- *
- * cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID __pyx_base;
-};
-static struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID *__pyx_vtabptr_4h5py_3h5t_TypeIntegerID;
-
-
-/* "h5t.pxd":40
- * pass
- *
- * cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
- * pass
- *
- */
-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
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-
-
-/* "h5t.pxd":26
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- *
- * cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
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- * pass
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-
-struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID {
- struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
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-
-/* "h5t.pxd":51
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-struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID {
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-static CYTHON_INLINE int __Pyx_CheckKeywordStrings(PyObject *kwdict, const char* function_name, int kw_allowed); /*proto*/
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-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse);
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-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); /*proto*/
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-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name);
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-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t);
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-static CYTHON_INLINE hsize_t __Pyx_PyInt_from_py_hsize_t(PyObject *);
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-static CYTHON_INLINE hbool_t __Pyx_PyInt_from_py_hbool_t(PyObject *);
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-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t);
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-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hbool_t(hbool_t);
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-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject *);
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject *);
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject *);
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject *);
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject *);
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject *);
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject *);
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject *);
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject *);
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject *);
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject *);
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject *);
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject *);
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject *);
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject *);
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject *);
-
-static int __Pyx_check_binary_version(void);
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig); /*proto*/
-
-#if !defined(__Pyx_PyIdentifier_FromString)
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s)
-#else
- #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s)
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-static PyObject *__Pyx_ImportModule(const char *name); /*proto*/
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-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); /*proto*/
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-static void* __Pyx_GetVtable(PyObject *dict); /*proto*/
-
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig); /*proto*/
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-typedef struct {
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-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object);
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-static void __Pyx_AddTraceback(const char *funcname, int c_line,
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-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); /*proto*/
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-
-/* Module declarations from 'h5py.api_types_ext' */
-
-/* Module declarations from 'h5py.api_types_hdf5' */
-
-/* Module declarations from 'h5py.defs' */
-static herr_t (*__pyx_f_4h5py_4defs_H5Fget_mdc_config)(hid_t, H5AC_cache_config_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Fset_mdc_config)(hid_t, H5AC_cache_config_t *); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Idec_ref)(hid_t); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Iget_ref)(hid_t); /*proto*/
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-static hid_t (*__pyx_f_4h5py_4defs_H5Pcopy)(hid_t); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Pget_class)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pclose)(hid_t); /*proto*/
-static htri_t (*__pyx_f_4h5py_4defs_H5Pequal)(hid_t, hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pclose_class)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_version)(hid_t, unsigned int *, unsigned int *, unsigned int *, unsigned int *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_userblock)(hid_t, hsize_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_userblock)(hid_t, hsize_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_sizes)(hid_t, size_t, size_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_sizes)(hid_t, size_t *, size_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fclose_degree)(hid_t, enum H5F_close_degree_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_fclose_degree)(hid_t, enum H5F_close_degree_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fapl_core)(hid_t, size_t, hbool_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_fapl_core)(hid_t, size_t *, hbool_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fapl_family)(hid_t, hsize_t, hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_fapl_family)(hid_t, hsize_t *, hid_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fapl_log)(hid_t, char *, unsigned int, size_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_cache)(hid_t, int, int, size_t, double); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_cache)(hid_t, int *, int *, size_t *, double *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fapl_sec2)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fapl_stdio)(hid_t); /*proto*/
-static hid_t (*__pyx_f_4h5py_4defs_H5Pget_driver)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_layout)(hid_t, int); /*proto*/
-static H5D_layout_t (*__pyx_f_4h5py_4defs_H5Pget_layout)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_chunk)(hid_t, int, hsize_t *); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Pget_chunk)(hid_t, int, hsize_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_deflate)(hid_t, int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fill_value)(hid_t, hid_t, void *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_fill_value)(hid_t, hid_t, void *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pfill_value_defined)(hid_t, H5D_fill_value_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fill_time)(hid_t, H5D_fill_time_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_fill_time)(hid_t, H5D_fill_time_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_alloc_time)(hid_t, H5D_alloc_time_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_alloc_time)(hid_t, H5D_alloc_time_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_filter)(hid_t, H5Z_filter_t, unsigned int, size_t, unsigned int *); /*proto*/
-static htri_t (*__pyx_f_4h5py_4defs_H5Pall_filters_avail)(hid_t); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Pget_nfilters)(hid_t); /*proto*/
-static H5Z_filter_t (*__pyx_f_4h5py_4defs_H5Pget_filter)(hid_t, unsigned int, unsigned int *, size_t *, unsigned int *, size_t, char *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_filter_by_id)(hid_t, H5Z_filter_t, unsigned int *, size_t *, unsigned int *, size_t, char *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Premove_filter)(hid_t, H5Z_filter_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_fletcher32)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_shuffle)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_szip)(hid_t, unsigned int, unsigned int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_scaleoffset)(hid_t, enum H5Z_SO_scale_type_t, int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_chunk_cache)(hid_t, size_t, size_t, double); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_chunk_cache)(hid_t, size_t *, size_t *, double *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_sieve_buf_size)(hid_t, size_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_sieve_buf_size)(hid_t, size_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_nlinks)(hid_t, size_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_nlinks)(hid_t, size_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_elink_prefix)(hid_t, char *); /*proto*/
-static Py_ssize_t (*__pyx_f_4h5py_4defs_H5Pget_elink_prefix)(hid_t, char *, size_t); /*proto*/
-static hid_t (*__pyx_f_4h5py_4defs_H5Pget_elink_fapl)(hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_elink_fapl)(hid_t, hid_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_create_intermediate_group)(hid_t, unsigned int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_create_intermediate_group)(hid_t, unsigned int *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_copy_object)(hid_t, unsigned int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_copy_object)(hid_t, unsigned int *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_char_encoding)(hid_t, H5T_cset_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_char_encoding)(hid_t, H5T_cset_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_obj_track_times)(hid_t, hbool_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_obj_track_times)(hid_t, hbool_t *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_link_creation_order)(hid_t, unsigned int); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_link_creation_order)(hid_t, unsigned int *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pset_libver_bounds)(hid_t, H5F_libver_t, H5F_libver_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Pget_libver_bounds)(hid_t, H5F_libver_t *, H5F_libver_t *); /*proto*/
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-/* Module declarations from 'h5py._objects' */
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-/* Module declarations from 'numpy' */
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-/* Module declarations from 'h5py.numpy' */
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-/* Module declarations from 'h5py.utils' */
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-static void (*__pyx_f_4h5py_5utils_efree)(void *); /*proto*/
-static int (*__pyx_f_4h5py_5utils_check_numpy_read)(PyArrayObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_5utils_check_numpy_read *__pyx_optional_args); /*proto*/
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-static int (*__pyx_f_4h5py_5utils_convert_tuple)(PyObject *, hsize_t *, hsize_t); /*proto*/
-static PyObject *(*__pyx_f_4h5py_5utils_convert_dims)(hsize_t *, hsize_t); /*proto*/
-static int (*__pyx_f_4h5py_5utils_require_tuple)(PyObject *, int, int, char *); /*proto*/
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-/* Module declarations from 'h5py.h5t' */
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-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeArrayID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeOpaqueID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeStringID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeVlenID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeTimeID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeBitfieldID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeReferenceID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeAtomicID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeIntegerID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeFloatID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeCompositeID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeEnumID = 0;
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-/* Module declarations from 'h5py.h5ac' */
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-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropClassID = 0;
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-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropCreateID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropCopyID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropOCID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropDCID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropFCID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropFAID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropDXID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropLCID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropLAID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropGCID = 0;
-static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropDAID = 0;
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-static PyObject *__pyx_f_4h5py_3h5p_propwrap(hid_t); /*proto*/
-static PyObject *__pyx_f_4h5py_3h5p_lockcls(hid_t); /*proto*/
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-/* Implementation of 'h5py.h5p' */
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-static PyObject *__pyx_builtin_TypeError;
-static PyObject *__pyx_builtin_RuntimeError;
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-static PyObject *__pyx_pf_4h5py_3h5p_6PropID_equal(struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_self, struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_plist); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_6PropID_2__richcmp__(PyObject *__pyx_v_self, PyObject *__pyx_v_other, int __pyx_v_how); /* proto */
-static Py_hash_t __pyx_pf_4h5py_3h5p_6PropID_4__hash__(CYTHON_UNUSED struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_11PropClassID___richcmp__(PyObject *__pyx_v_self, PyObject *__pyx_v_other, int __pyx_v_how); /* proto */
-static Py_hash_t __pyx_pf_4h5py_3h5p_11PropClassID_2__hash__(struct __pyx_obj_4h5py_3h5p_PropClassID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_14PropInstanceID_copy(struct __pyx_obj_4h5py_3h5p_PropInstanceID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_14PropInstanceID_2_close(struct __pyx_obj_4h5py_3h5p_PropInstanceID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_14PropInstanceID_4get_class(struct __pyx_obj_4h5py_3h5p_PropInstanceID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_10PropCopyID_set_copy_object(struct __pyx_obj_4h5py_3h5p_PropCopyID *__pyx_v_self, unsigned int __pyx_v_flags); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_10PropCopyID_2get_copy_object(struct __pyx_obj_4h5py_3h5p_PropCopyID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_get_version(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_2set_userblock(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self, hsize_t __pyx_v_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_4get_userblock(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_6set_sizes(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self, size_t __pyx_v_addr, size_t __pyx_v_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_8get_sizes(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_10set_link_creation_order(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self, unsigned int __pyx_v_flags); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFCID_12get_link_creation_order(struct __pyx_obj_4h5py_3h5p_PropFCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_set_layout(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_layout_code); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_2get_layout(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_4set_chunk(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, PyObject *__pyx_v_chunksize); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_6get_chunk(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_8set_fill_value(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, PyArrayObject *__pyx_v_value); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_10get_fill_value(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, PyArrayObject *__pyx_v_value); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_12fill_value_defined(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_14set_fill_time(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_fill_time); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_16get_fill_time(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_18set_alloc_time(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_alloc_time); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_20get_alloc_time(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_22set_filter(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_filter_code, unsigned int __pyx_v_flags, PyObject *__pyx_v_values); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_24all_filters_avail(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_26get_nfilters(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_28get_filter(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_filter_idx); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_30_has_filter(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_filter_code); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_32get_filter_by_id(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_filter_code); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_34remove_filter(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, int __pyx_v_filter_class); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_36set_deflate(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, unsigned int __pyx_v_level); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_38set_fletcher32(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_40set_shuffle(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_42set_szip(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, unsigned int __pyx_v_options, unsigned int __pyx_v_pixels_per_block); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDCID_44set_scaleoffset(struct __pyx_obj_4h5py_3h5p_PropDCID *__pyx_v_self, enum H5Z_SO_scale_type_t __pyx_v_scale_type, int __pyx_v_scale_factor); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_set_fclose_degree(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, int __pyx_v_close_degree); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_2get_fclose_degree(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_4set_fapl_core(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, size_t __pyx_v_block_size, hbool_t __pyx_v_backing_store); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_6get_fapl_core(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_8set_fapl_family(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, hsize_t __pyx_v_memb_size, struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_memb_fapl); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_10get_fapl_family(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_12set_fapl_log(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, char *__pyx_v_logfile, unsigned int __pyx_v_flags, size_t __pyx_v_buf_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_14set_fapl_sec2(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_16set_fapl_stdio(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_18get_driver(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_20set_cache(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, int __pyx_v_mdc, int __pyx_v_rdcc, size_t __pyx_v_rdcc_nbytes, double __pyx_v_rdcc_w0); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_22get_cache(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_24set_sieve_buf_size(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, size_t __pyx_v_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_26get_sieve_buf_size(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_28set_libver_bounds(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, int __pyx_v_low, int __pyx_v_high); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_30get_libver_bounds(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_32get_mdc_config(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropFAID_34set_mdc_config(struct __pyx_obj_4h5py_3h5p_PropFAID *__pyx_v_self, struct __pyx_obj_4h5py_4h5ac_CacheConfig *__pyx_v_config); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLCID_set_char_encoding(struct __pyx_obj_4h5py_3h5p_PropLCID *__pyx_v_self, int __pyx_v_encoding); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLCID_2get_char_encoding(struct __pyx_obj_4h5py_3h5p_PropLCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLCID_4set_create_intermediate_group(struct __pyx_obj_4h5py_3h5p_PropLCID *__pyx_v_self, int __pyx_v_create); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLCID_6get_create_intermediate_group(struct __pyx_obj_4h5py_3h5p_PropLCID *__pyx_v_self); /* proto */
-static int __pyx_pf_4h5py_3h5p_8PropLAID___cinit__(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_args); /* proto */
-static void __pyx_pf_4h5py_3h5p_8PropLAID_2__dealloc__(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_4set_nlinks(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self, size_t __pyx_v_nlinks); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_6get_nlinks(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_8set_elink_prefix(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self, char *__pyx_v_prefix); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_10get_elink_prefix(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_12set_elink_fapl(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self, struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_fapl); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropLAID_14get_elink_fapl(struct __pyx_obj_4h5py_3h5p_PropLAID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropGCID_set_link_creation_order(struct __pyx_obj_4h5py_3h5p_PropGCID *__pyx_v_self, unsigned int __pyx_v_flags); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropGCID_2get_link_creation_order(struct __pyx_obj_4h5py_3h5p_PropGCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropOCID_set_obj_track_times(struct __pyx_obj_4h5py_3h5p_PropOCID *__pyx_v_self, PyObject *__pyx_v_track_times); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropOCID_2get_obj_track_times(struct __pyx_obj_4h5py_3h5p_PropOCID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDAID_set_chunk_cache(struct __pyx_obj_4h5py_3h5p_PropDAID *__pyx_v_self, size_t __pyx_v_rdcc_nslots, size_t __pyx_v_rdcc_nbytes, double __pyx_v_rdcc_w0); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5p_8PropDAID_2get_chunk_cache(struct __pyx_obj_4h5py_3h5p_PropDAID *__pyx_v_self); /* proto */
-static char __pyx_k_1[] = "No class found for ID %d";
-static char __pyx_k_2[] = "Property lists are unhashable";
-static char __pyx_k_5[] = "Filter index must be a non-negative integer";
-static char __pyx_k_7[] = "Failed to get hit rate";
-static char __pyx_k_10[] = "\n HDF5 property list interface.\n";
-static char __pyx_k_13[] = "/home/computer/h5py/h5py/h5p.pyx";
-static char __pyx_k_14[] = "h5py.h5p";
-static char __pyx_k__cls[] = "cls";
-static char __pyx_k__low[] = "low";
-static char __pyx_k__mdc[] = "mdc";
-static char __pyx_k__addr[] = "addr";
-static char __pyx_k__h5py[] = "h5py";
-static char __pyx_k__high[] = "high";
-static char __pyx_k__lock[] = "lock";
-static char __pyx_k__open[] = "open";
-static char __pyx_k__rdcc[] = "rdcc";
-static char __pyx_k__size[] = "size";
-static char __pyx_k__dtype[] = "dtype";
-static char __pyx_k__equal[] = "equal";
-static char __pyx_k__flags[] = "flags";
-static char __pyx_k__level[] = "level";
-static char __pyx_k__newid[] = "newid";
-static char __pyx_k__valid[] = "valid";
-static char __pyx_k__create[] = "create";
-static char __pyx_k__values[] = "values";
-static char __pyx_k__DEFAULT[] = "DEFAULT";
-static char __pyx_k__logfile[] = "logfile";
-static char __pyx_k__options[] = "options";
-static char __pyx_k__rdcc_w0[] = "rdcc_w0";
-static char __pyx_k__NO_CLASS[] = "NO_CLASS";
-static char __pyx_k____exit__[] = "__exit__";
-static char __pyx_k____main__[] = "__main__";
-static char __pyx_k____test__[] = "__test__";
-static char __pyx_k___objects[] = "_objects";
-static char __pyx_k__buf_size[] = "buf_size";
-static char __pyx_k__registry[] = "registry";
-static char __pyx_k__TypeError[] = "TypeError";
-static char __pyx_k____enter__[] = "__enter__";
-static char __pyx_k__chunksize[] = "chunksize";
-static char __pyx_k__memb_fapl[] = "memb_fapl";
-static char __pyx_k__memb_size[] = "memb_size";
-static char __pyx_k__ValueError[] = "ValueError";
-static char __pyx_k__block_size[] = "block_size";
-static char __pyx_k__get_filter[] = "get_filter";
-static char __pyx_k__scale_type[] = "scale_type";
-static char __pyx_k__FILE_ACCESS[] = "FILE_ACCESS";
-static char __pyx_k__FILE_CREATE[] = "FILE_CREATE";
-static char __pyx_k__LINK_ACCESS[] = "LINK_ACCESS";
-static char __pyx_k__LINK_CREATE[] = "LINK_CREATE";
-static char __pyx_k__OBJECT_COPY[] = "OBJECT_COPY";
-static char __pyx_k____richcmp__[] = "__richcmp__";
-static char __pyx_k___has_filter[] = "_has_filter";
-static char __pyx_k__filter_code[] = "filter_code";
-static char __pyx_k__rdcc_nbytes[] = "rdcc_nbytes";
-static char __pyx_k__rdcc_nslots[] = "rdcc_nslots";
-static char __pyx_k__DATASET_XFER[] = "DATASET_XFER";
-static char __pyx_k__GROUP_CREATE[] = "GROUP_CREATE";
-static char __pyx_k__RuntimeError[] = "RuntimeError";
-static char __pyx_k__get_nfilters[] = "get_nfilters";
-static char __pyx_k__scale_factor[] = "scale_factor";
-static char __pyx_k__OBJECT_CREATE[] = "OBJECT_CREATE";
-static char __pyx_k__backing_store[] = "backing_store";
-static char __pyx_k__DATASET_ACCESS[] = "DATASET_ACCESS";
-static char __pyx_k__DATASET_CREATE[] = "DATASET_CREATE";
-static char __pyx_k__NotImplemented[] = "NotImplemented";
-static char __pyx_k__pixels_per_block[] = "pixels_per_block";
-static char __pyx_k__CRT_ORDER_INDEXED[] = "CRT_ORDER_INDEXED";
-static char __pyx_k__CRT_ORDER_TRACKED[] = "CRT_ORDER_TRACKED";
-static PyObject *__pyx_kp_s_1;
-static PyObject *__pyx_kp_s_13;
-static PyObject *__pyx_n_s_14;
-static PyObject *__pyx_kp_s_2;
-static PyObject *__pyx_kp_s_5;
-static PyObject *__pyx_kp_s_7;
-static PyObject *__pyx_n_s__CRT_ORDER_INDEXED;
-static PyObject *__pyx_n_s__CRT_ORDER_TRACKED;
-static PyObject *__pyx_n_s__DATASET_ACCESS;
-static PyObject *__pyx_n_s__DATASET_CREATE;
-static PyObject *__pyx_n_s__DATASET_XFER;
-static PyObject *__pyx_n_s__DEFAULT;
-static PyObject *__pyx_n_s__FILE_ACCESS;
-static PyObject *__pyx_n_s__FILE_CREATE;
-static PyObject *__pyx_n_s__GROUP_CREATE;
-static PyObject *__pyx_n_s__LINK_ACCESS;
-static PyObject *__pyx_n_s__LINK_CREATE;
-static PyObject *__pyx_n_s__NO_CLASS;
-static PyObject *__pyx_n_s__NotImplemented;
-static PyObject *__pyx_n_s__OBJECT_COPY;
-static PyObject *__pyx_n_s__OBJECT_CREATE;
-static PyObject *__pyx_n_s__RuntimeError;
-static PyObject *__pyx_n_s__TypeError;
-static PyObject *__pyx_n_s__ValueError;
-static PyObject *__pyx_n_s____enter__;
-static PyObject *__pyx_n_s____exit__;
-static PyObject *__pyx_n_s____main__;
-static PyObject *__pyx_n_s____richcmp__;
-static PyObject *__pyx_n_s____test__;
-static PyObject *__pyx_n_s___has_filter;
-static PyObject *__pyx_n_s___objects;
-static PyObject *__pyx_n_s__addr;
-static PyObject *__pyx_n_s__backing_store;
-static PyObject *__pyx_n_s__block_size;
-static PyObject *__pyx_n_s__buf_size;
-static PyObject *__pyx_n_s__cls;
-static PyObject *__pyx_n_s__create;
-static PyObject *__pyx_n_s__dtype;
-static PyObject *__pyx_n_s__equal;
-static PyObject *__pyx_n_s__filter_code;
-static PyObject *__pyx_n_s__flags;
-static PyObject *__pyx_n_s__get_filter;
-static PyObject *__pyx_n_s__get_nfilters;
-static PyObject *__pyx_n_s__h5py;
-static PyObject *__pyx_n_s__high;
-static PyObject *__pyx_n_s__level;
-static PyObject *__pyx_n_s__lock;
-static PyObject *__pyx_n_s__logfile;
-static PyObject *__pyx_n_s__low;
-static PyObject *__pyx_n_s__mdc;
-static PyObject *__pyx_n_s__memb_fapl;
-static PyObject *__pyx_n_s__memb_size;
-static PyObject *__pyx_n_s__newid;
-static PyObject *__pyx_n_s__open;
-static PyObject *__pyx_n_s__options;
-static PyObject *__pyx_n_s__pixels_per_block;
-static PyObject *__pyx_n_s__rdcc;
-static PyObject *__pyx_n_s__rdcc_nbytes;
-static PyObject *__pyx_n_s__rdcc_nslots;
-static PyObject *__pyx_n_s__rdcc_w0;
-static PyObject *__pyx_n_s__registry;
-static PyObject *__pyx_n_s__scale_factor;
-static PyObject *__pyx_n_s__scale_type;
-static PyObject *__pyx_n_s__size;
-static PyObject *__pyx_n_s__valid;
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- if (__Pyx_SetAttrString(__pyx_m, "PropDCID", (PyObject *)&__pyx_type_4h5py_3h5p_PropDCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 356; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- __pyx_ptype_4h5py_3h5p_PropDCID = &__pyx_type_4h5py_3h5p_PropDCID;
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- if (__Pyx_SetAttrString(__pyx_m, "PropFCID", (PyObject *)&__pyx_type_4h5py_3h5p_PropFCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 265; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropFCID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropFCID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropFCID, __pyx_base.__pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropFCID = &__pyx_type_4h5py_3h5p_PropFCID;
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- if (__Pyx_SetAttrString(__pyx_m, "PropFAID", (PyObject *)&__pyx_type_4h5py_3h5p_PropFAID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 720; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropFAID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropFAID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropFAID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropFAID = &__pyx_type_4h5py_3h5p_PropFAID;
- __pyx_type_4h5py_3h5p_PropDXID.tp_base = __pyx_ptype_4h5py_3h5p_PropInstanceID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5p_PropDXID) < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "PropDXID", (PyObject *)&__pyx_type_4h5py_3h5p_PropDXID) < 0) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropDXID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropDXID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropDXID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropDXID = &__pyx_type_4h5py_3h5p_PropDXID;
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- if (PyType_Ready(&__pyx_type_4h5py_3h5p_PropLCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 991; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "PropLCID", (PyObject *)&__pyx_type_4h5py_3h5p_PropLCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 991; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropLCID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropLCID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropLCID, __pyx_base.__pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropLCID = &__pyx_type_4h5py_3h5p_PropLCID;
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- if (PyType_Ready(&__pyx_type_4h5py_3h5p_PropLAID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1035; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "PropLAID", (PyObject *)&__pyx_type_4h5py_3h5p_PropLAID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1035; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropLAID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropLAID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropLAID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropLAID = &__pyx_type_4h5py_3h5p_PropLAID;
- __pyx_type_4h5py_3h5p_PropGCID.tp_base = __pyx_ptype_4h5py_3h5p_PropOCID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5p_PropGCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1117; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "PropGCID", (PyObject *)&__pyx_type_4h5py_3h5p_PropGCID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1117; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropGCID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropGCID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropGCID, __pyx_base.__pyx_base.__pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropGCID = &__pyx_type_4h5py_3h5p_PropGCID;
- __pyx_type_4h5py_3h5p_PropDAID.tp_base = __pyx_ptype_4h5py_3h5p_PropInstanceID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5p_PropDAID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1165; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "PropDAID", (PyObject *)&__pyx_type_4h5py_3h5p_PropDAID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1165; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5p_PropDAID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5p_PropDAID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5p_PropDAID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5p_PropDAID = &__pyx_type_4h5py_3h5p_PropDAID;
- /*--- Type import code ---*/
- __pyx_ptype_4h5py_5numpy_dtype = __Pyx_ImportType("numpy", "dtype", sizeof(PyArray_Descr), 0); if (unlikely(!__pyx_ptype_4h5py_5numpy_dtype)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_5numpy_ndarray = __Pyx_ImportType("numpy", "ndarray", sizeof(PyArrayObject), 0); if (unlikely(!__pyx_ptype_4h5py_5numpy_ndarray)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 71; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeID = __Pyx_ImportType("h5py.h5t", "TypeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 14; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 14; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeArrayID = __Pyx_ImportType("h5py.h5t", "TypeArrayID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeArrayID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeArrayID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeArrayID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeArrayID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeArrayID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 20; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeOpaqueID = __Pyx_ImportType("h5py.h5t", "TypeOpaqueID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeOpaqueID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeOpaqueID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeOpaqueID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeOpaqueID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeOpaqueID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeStringID = __Pyx_ImportType("h5py.h5t", "TypeStringID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeStringID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeStringID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeStringID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeStringID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeStringID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeVlenID = __Pyx_ImportType("h5py.h5t", "TypeVlenID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeVlenID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeVlenID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeVlenID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeVlenID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeVlenID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeVlenID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeTimeID = __Pyx_ImportType("h5py.h5t", "TypeTimeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeTimeID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeTimeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 34; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeTimeID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeTimeID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeTimeID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeTimeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 34; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeBitfieldID = __Pyx_ImportType("h5py.h5t", "TypeBitfieldID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeBitfieldID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeBitfieldID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeBitfieldID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeBitfieldID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeBitfieldID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeBitfieldID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeReferenceID = __Pyx_ImportType("h5py.h5t", "TypeReferenceID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeReferenceID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeReferenceID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- __pyx_ptype_4h5py_3h5t_TypeAtomicID = __Pyx_ImportType("h5py.h5t", "TypeAtomicID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeAtomicID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeAtomicID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- __pyx_vtabptr_4h5py_3h5t_TypeIntegerID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeIntegerID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeIntegerID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeFloatID = __Pyx_ImportType("h5py.h5t", "TypeFloatID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeFloatID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeFloatID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeFloatID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeFloatID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeFloatID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeCompositeID = __Pyx_ImportType("h5py.h5t", "TypeCompositeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeCompositeID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeCompositeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 56; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- __pyx_ptype_4h5py_3h5t_TypeEnumID = __Pyx_ImportType("h5py.h5t", "TypeEnumID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeEnumID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeEnumID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeEnumID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeEnumID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeEnumID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeEnumID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5t_TypeCompoundID = __Pyx_ImportType("h5py.h5t", "TypeCompoundID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeCompoundID), 1); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeCompoundID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_vtabptr_4h5py_3h5t_TypeCompoundID = (struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID*)__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeCompoundID->tp_dict); if (unlikely(!__pyx_vtabptr_4h5py_3h5t_TypeCompoundID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_4h5ac_CacheConfig = __Pyx_ImportType("h5py.h5ac", "CacheConfig", sizeof(struct __pyx_obj_4h5py_4h5ac_CacheConfig), 1); if (unlikely(!__pyx_ptype_4h5py_4h5ac_CacheConfig)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 12; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- /*--- Variable import code ---*/
- /*--- Function import code ---*/
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- if (__Pyx_ImportFunction(__pyx_t_1, "H5Fset_mdc_config", (void (**)(void))&__pyx_f_4h5py_4defs_H5Fset_mdc_config, "herr_t (hid_t, H5AC_cache_config_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_fapl_family", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_fapl_family, "herr_t (hid_t, hsize_t *, hid_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fapl_log", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fapl_log, "herr_t (hid_t, char *, unsigned int, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_cache", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_cache, "herr_t (hid_t, int, int, size_t, double)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_cache", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_cache, "herr_t (hid_t, int *, int *, size_t *, double *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fapl_sec2", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fapl_sec2, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fapl_stdio", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fapl_stdio, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_driver", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_driver, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_layout", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_layout, "herr_t (hid_t, int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_layout", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_layout, "H5D_layout_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_chunk", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_chunk, "herr_t (hid_t, int, hsize_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_chunk", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_chunk, "int (hid_t, int, hsize_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_deflate", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_deflate, "herr_t (hid_t, int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fill_value", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fill_value, "herr_t (hid_t, hid_t, void *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_fill_value", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_fill_value, "herr_t (hid_t, hid_t, void *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pfill_value_defined", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pfill_value_defined, "herr_t (hid_t, H5D_fill_value_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fill_time", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fill_time, "herr_t (hid_t, H5D_fill_time_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_fill_time", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_fill_time, "herr_t (hid_t, H5D_fill_time_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_alloc_time", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_alloc_time, "herr_t (hid_t, H5D_alloc_time_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_alloc_time", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_alloc_time, "herr_t (hid_t, H5D_alloc_time_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_filter", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_filter, "herr_t (hid_t, H5Z_filter_t, unsigned int, size_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pall_filters_avail", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pall_filters_avail, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_nfilters", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_nfilters, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_filter", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_filter, "H5Z_filter_t (hid_t, unsigned int, unsigned int *, size_t *, unsigned int *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_filter_by_id", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_filter_by_id, "herr_t (hid_t, H5Z_filter_t, unsigned int *, size_t *, unsigned int *, size_t, char *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Premove_filter", (void (**)(void))&__pyx_f_4h5py_4defs_H5Premove_filter, "herr_t (hid_t, H5Z_filter_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_fletcher32", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_fletcher32, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_shuffle", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_shuffle, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_szip", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_szip, "herr_t (hid_t, unsigned int, unsigned int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_scaleoffset", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_scaleoffset, "herr_t (hid_t, enum H5Z_SO_scale_type_t, int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_chunk_cache", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_chunk_cache, "herr_t (hid_t, size_t, size_t, double)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_chunk_cache", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_chunk_cache, "herr_t (hid_t, size_t *, size_t *, double *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_sieve_buf_size", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_sieve_buf_size, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_sieve_buf_size", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_sieve_buf_size, "herr_t (hid_t, size_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_nlinks", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_nlinks, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_nlinks", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_nlinks, "herr_t (hid_t, size_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_elink_prefix", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_elink_prefix, "herr_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_elink_prefix", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_elink_prefix, "Py_ssize_t (hid_t, char *, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_elink_fapl", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_elink_fapl, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_elink_fapl", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_elink_fapl, "herr_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_create_intermediate_group", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_create_intermediate_group, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pget_create_intermediate_group", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pget_create_intermediate_group, "herr_t (hid_t, unsigned int *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Pset_copy_object", (void (**)(void))&__pyx_f_4h5py_4defs_H5Pset_copy_object, "herr_t (hid_t, unsigned int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- /* "h5py/h5p.pyx":1
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- goto __pyx_L0;
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- Py_DECREF(__pyx_m); __pyx_m = 0;
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-static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
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-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
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-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
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- PyErr_Fetch(type, value, tb);
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-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
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- __Pyx_ErrRestore(type, value, tb);
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-raise_error:
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- return;
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-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
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- value = 0;
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- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
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- Py_INCREF(value);
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- goto bad;
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- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
- if (unlikely(!type)) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (likely(PyObject_TypeCheck(obj, type)))
- return 1;
- PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
- Py_TYPE(obj)->tp_name, type->tp_name);
- return 0;
-}
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static void __Pyx_RaiseArgtupleInvalid(
- const char* func_name,
- int exact,
- Py_ssize_t num_min,
- Py_ssize_t num_max,
- Py_ssize_t num_found)
-{
- Py_ssize_t num_expected;
- const char *more_or_less;
- if (num_found < num_min) {
- num_expected = num_min;
- more_or_less = "at least";
- } else {
- num_expected = num_max;
- more_or_less = "at most";
- }
- if (exact) {
- more_or_less = "exactly";
- }
- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
- (num_expected == 1) ? "" : "s", num_found);
-}
-
-static void __Pyx_RaiseDoubleKeywordsError(
- const char* func_name,
- PyObject* kw_name)
-{
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION >= 3
- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
- #else
- "%s() got multiple values for keyword argument '%s'", func_name,
- PyString_AsString(kw_name));
- #endif
-}
-
-static int __Pyx_ParseOptionalKeywords(
- PyObject *kwds,
- PyObject **argnames[],
- PyObject *kwds2,
- PyObject *values[],
- Py_ssize_t num_pos_args,
- const char* function_name)
-{
- PyObject *key = 0, *value = 0;
- Py_ssize_t pos = 0;
- PyObject*** name;
- PyObject*** first_kw_arg = argnames + num_pos_args;
- while (PyDict_Next(kwds, &pos, &key, &value)) {
- name = first_kw_arg;
- while (*name && (**name != key)) name++;
- if (*name) {
- values[name-argnames] = value;
- continue;
- }
- name = first_kw_arg;
- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
- if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- if ((**argname == key) || (
- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
- && _PyString_Eq(**argname, key))) {
- goto arg_passed_twice;
- }
- argname++;
- }
- }
- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static CYTHON_INLINE int __Pyx_CheckKeywordStrings(
- PyObject *kwdict,
- const char* function_name,
- int kw_allowed)
-{
- PyObject* key = 0;
- Py_ssize_t pos = 0;
-#if CPYTHON_COMPILING_IN_PYPY
- if (!kw_allowed && PyDict_Next(kwdict, &pos, &key, 0))
- goto invalid_keyword;
- return 1;
-#else
- while (PyDict_Next(kwdict, &pos, &key, 0)) {
- #if PY_MAJOR_VERSION < 3
- if (unlikely(!PyString_CheckExact(key)) && unlikely(!PyString_Check(key)))
- #endif
- if (unlikely(!PyUnicode_Check(key)))
- goto invalid_keyword_type;
- }
- if ((!kw_allowed) && unlikely(key))
- goto invalid_keyword;
- return 1;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- return 0;
-#endif
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
- return 0;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE hsize_t __Pyx_PyInt_from_py_hsize_t(PyObject* x) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hsize_t) == sizeof(char)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hsize_t) == sizeof(short)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hsize_t) == sizeof(int)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hsize_t) == sizeof(long)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hsize_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hsize_t)-1;
- }
-}
-
-static CYTHON_INLINE hbool_t __Pyx_PyInt_from_py_hbool_t(PyObject* x) {
- const hbool_t neg_one = (hbool_t)-1, const_zero = (hbool_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hbool_t) == sizeof(char)) {
- if (is_unsigned)
- return (hbool_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hbool_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hbool_t) == sizeof(short)) {
- if (is_unsigned)
- return (hbool_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hbool_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hbool_t) == sizeof(int)) {
- if (is_unsigned)
- return (hbool_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hbool_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hbool_t) == sizeof(long)) {
- if (is_unsigned)
- return (hbool_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hbool_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hbool_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hbool_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hbool_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hbool_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hbool_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hbool_t(hbool_t val) {
- const hbool_t neg_one = (hbool_t)-1, const_zero = (hbool_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hbool_t) == sizeof(char)) ||
- (sizeof(hbool_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hbool_t) == sizeof(int)) ||
- (sizeof(hbool_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hbool_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hbool_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-static void* __Pyx_GetVtable(PyObject *dict) {
- void* ptr;
- PyObject *ob = PyMapping_GetItemString(dict, (char *)"__pyx_vtable__");
- if (!ob)
- goto bad;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- ptr = PyCapsule_GetPointer(ob, 0);
-#else
- ptr = PyCObject_AsVoidPtr(ob);
-#endif
- if (!ptr && !PyErr_Occurred())
- PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type");
- Py_DECREF(ob);
- return ptr;
-bad:
- Py_XDECREF(ob);
- return NULL;
-}
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5p.pyx b/h5py/h5p.pyx
index 421670d..f8edc6d 100644
--- a/h5py/h5p.pyx
+++ b/h5py/h5p.pyx
@@ -22,6 +22,12 @@ from h5t cimport TypeID, py_create
from h5ac cimport CacheConfig
from h5py import _objects
+from ._objects import phil, with_phil
+
+if MPI:
+ from mpi4py.mpi_c cimport MPI_Comm, MPI_Info, MPI_Comm_dup, MPI_Info_dup, \
+ MPI_Comm_free, MPI_Info_free
+
# Initialization
import_array()
@@ -61,13 +67,13 @@ cdef object propwrap(hid_t id_in):
else:
raise ValueError("No class found for ID %d" % id_in)
- return pcls.open(id_in)
+ return pcls(id_in)
finally:
H5Pclose_class(clsid)
cdef object lockcls(hid_t id_in):
cdef PropClassID pid
- pid = PropClassID.open(id_in)
+ pid = PropClassID(id_in)
pid.locked = 1
return pid
@@ -103,6 +109,7 @@ DEFAULT = None # In the HDF5 header files this is actually 0, which is an
# === Property list functional API ============================================
+ at with_phil
def create(PropClassID cls not None):
"""(PropClassID cls) => PropID
@@ -123,6 +130,7 @@ def create(PropClassID cls not None):
newid = H5Pcreate(cls.id)
return propwrap(newid)
+
# === Class API ===============================================================
cdef class PropID(ObjectID):
@@ -132,6 +140,7 @@ cdef class PropID(ObjectID):
"""
+ @with_phil
def equal(self, PropID plist not None):
"""(PropID plist) => BOOL
@@ -141,14 +150,16 @@ cdef class PropID(ObjectID):
def __richcmp__(self, object other, int how):
cdef bint truthval = 0
- if how != 2 and how != 3:
- return NotImplemented
- if type(self) == type(other):
- truthval = self.equal(other)
- if how == 2:
- return truthval
- return not truthval
+ with phil:
+ if how != 2 and how != 3:
+ return NotImplemented
+ if type(self) == type(other):
+ truthval = self.equal(other)
+
+ if how == 2:
+ return truthval
+ return not truthval
def __hash__(self):
raise TypeError("Property lists are unhashable")
@@ -182,6 +193,7 @@ cdef class PropInstanceID(PropID):
"""
+ @with_phil
def copy(self):
"""() => PropList newid
@@ -190,25 +202,13 @@ cdef class PropInstanceID(PropID):
return type(self)(H5Pcopy(self.id))
- def _close(self):
- """()
-
- Terminate access through this identifier. You shouldn't have to
- do this manually, as propery lists are automatically deleted when
- their Python wrappers are freed.
- """
- with _objects.registry.lock:
- H5Pclose(self.id)
- if not self.valid:
- del _objects.registry[self.id]
-
-
def get_class(self):
"""() => PropClassID
Determine the class of a property list object.
"""
- return PropClassID.open(H5Pget_class(self.id))
+ return PropClassID(H5Pget_class(self.id))
+
cdef class PropCreateID(PropInstanceID):
@@ -217,6 +217,7 @@ cdef class PropCreateID(PropInstanceID):
"""
pass
+
cdef class PropCopyID(PropInstanceID):
"""
@@ -224,6 +225,7 @@ cdef class PropCopyID(PropInstanceID):
"""
+ @with_phil
def set_copy_object(self, unsigned int flags):
"""(UINT flags)
@@ -248,6 +250,7 @@ cdef class PropCopyID(PropInstanceID):
H5Pset_copy_object(self.id, flags)
+ @with_phil
def get_copy_object(self):
"""() => UINT flags
@@ -269,6 +272,7 @@ cdef class PropFCID(PropCreateID):
"""
+ @with_phil
def get_version(self):
"""() => TUPLE version_info
@@ -291,6 +295,7 @@ cdef class PropFCID(PropCreateID):
return (super_, freelist, stab, shhdr)
+ @with_phil
def set_userblock(self, hsize_t size):
"""(INT/LONG size)
@@ -300,6 +305,7 @@ cdef class PropFCID(PropCreateID):
H5Pset_userblock(self.id, size)
+ @with_phil
def get_userblock(self):
"""() => LONG size
@@ -310,6 +316,7 @@ cdef class PropFCID(PropCreateID):
return size
+ @with_phil
def set_sizes(self, size_t addr, size_t size):
"""(UINT addr, UINT size)
@@ -319,6 +326,7 @@ cdef class PropFCID(PropCreateID):
H5Pset_sizes(self.id, addr, size)
+ @with_phil
def get_sizes(self):
"""() => TUPLE sizes
@@ -333,6 +341,8 @@ cdef class PropFCID(PropCreateID):
H5Pget_sizes(self.id, &addr, &size)
return (addr, size)
+
+ @with_phil
def set_link_creation_order(self, unsigned int flags):
""" (UINT flags)
@@ -342,6 +352,8 @@ cdef class PropFCID(PropCreateID):
"""
H5Pset_link_creation_order(self.id, flags)
+
+ @with_phil
def get_link_creation_order(self):
""" () -> UINT flags
@@ -360,6 +372,7 @@ cdef class PropDCID(PropOCID):
"""
+ @with_phil
def set_layout(self, int layout_code):
"""(INT layout_code)
@@ -372,6 +385,7 @@ cdef class PropDCID(PropOCID):
H5Pset_layout(self.id, layout_code)
+ @with_phil
def get_layout(self):
"""() => INT layout_code
@@ -384,6 +398,7 @@ cdef class PropDCID(PropOCID):
return <int>H5Pget_layout(self.id)
+ @with_phil
def set_chunk(self, object chunksize):
"""(TUPLE chunksize)
@@ -405,6 +420,7 @@ cdef class PropDCID(PropOCID):
efree(dims)
+ @with_phil
def get_chunk(self):
"""() => TUPLE chunk_dimensions
@@ -425,6 +441,7 @@ cdef class PropDCID(PropOCID):
efree(dims)
+ @with_phil
def set_fill_value(self, ndarray value not None):
"""(NDARRAY value)
@@ -439,6 +456,7 @@ cdef class PropDCID(PropOCID):
H5Pset_fill_value(self.id, tid.id, value.data)
+ @with_phil
def get_fill_value(self, ndarray value not None):
"""(NDARRAY value)
@@ -453,6 +471,7 @@ cdef class PropDCID(PropOCID):
H5Pget_fill_value(self.id, tid.id, value.data)
+ @with_phil
def fill_value_defined(self):
"""() => INT fill_status
@@ -467,6 +486,7 @@ cdef class PropDCID(PropOCID):
return <int>val
+ @with_phil
def set_fill_time(self, int fill_time):
"""(INT fill_time)
@@ -480,6 +500,7 @@ cdef class PropDCID(PropOCID):
H5Pset_fill_time(self.id, <H5D_fill_time_t>fill_time)
+ @with_phil
def get_fill_time(self):
""" () => INT
@@ -495,6 +516,7 @@ cdef class PropDCID(PropOCID):
return <int>fill_time
+ @with_phil
def set_alloc_time(self, int alloc_time):
"""(INT alloc_time)
@@ -503,6 +525,7 @@ cdef class PropDCID(PropOCID):
H5Pset_alloc_time(self.id, <H5D_alloc_time_t>alloc_time)
+ @with_phil
def get_alloc_time(self):
"""() => INT alloc_time
@@ -515,7 +538,7 @@ cdef class PropDCID(PropOCID):
# === Filter functions ====================================================
-
+ @with_phil
def set_filter(self, int filter_code, unsigned int flags=0, object values=None):
"""(INT filter_code, UINT flags=0, TUPLE values=None)
@@ -558,6 +581,7 @@ cdef class PropDCID(PropOCID):
efree(cd_values)
+ @with_phil
def all_filters_avail(self):
"""() => BOOL
@@ -567,6 +591,7 @@ cdef class PropDCID(PropOCID):
return <bint>(H5Pall_filters_avail(self.id))
+ @with_phil
def get_nfilters(self):
"""() => INT
@@ -575,6 +600,7 @@ cdef class PropDCID(PropOCID):
return H5Pget_nfilters(self.id)
+ @with_phil
def get_filter(self, int filter_idx):
"""(UINT filter_idx) => TUPLE filter_info
@@ -609,6 +635,7 @@ cdef class PropDCID(PropOCID):
return (filter_code, flags, tuple(vlist), name)
+ @with_phil
def _has_filter(self, int filter_code):
"""(INT filter_code)
@@ -624,6 +651,7 @@ cdef class PropDCID(PropOCID):
return False
+ @with_phil
def get_filter_by_id(self, int filter_code):
"""(INT filter_code) => TUPLE filter_info or None
@@ -661,6 +689,7 @@ cdef class PropDCID(PropOCID):
return (flags, tuple(vlist), name)
+ @with_phil
def remove_filter(self, int filter_class):
"""(INT filter_class)
@@ -670,6 +699,7 @@ cdef class PropDCID(PropOCID):
H5Premove_filter(self.id, <H5Z_filter_t>filter_class)
+ @with_phil
def set_deflate(self, unsigned int level=5):
"""(UINT level=5)
@@ -679,6 +709,7 @@ cdef class PropDCID(PropOCID):
H5Pset_deflate(self.id, level)
+ @with_phil
def set_fletcher32(self):
"""()
@@ -687,6 +718,7 @@ cdef class PropDCID(PropOCID):
H5Pset_fletcher32(self.id)
+ @with_phil
def set_shuffle(self):
"""()
@@ -696,6 +728,7 @@ cdef class PropDCID(PropOCID):
H5Pset_shuffle(self.id)
+ @with_phil
def set_szip(self, unsigned int options, unsigned int pixels_per_block):
"""(UINT options, UINT pixels_per_block)
@@ -704,6 +737,8 @@ cdef class PropDCID(PropOCID):
"""
H5Pset_szip(self.id, options, pixels_per_block)
+
+ @with_phil
def set_scaleoffset(self, H5Z_SO_scale_type_t scale_type, int scale_factor):
'''(H5Z_SO_scale_type_t scale_type, INT scale_factor)
@@ -724,6 +759,7 @@ cdef class PropFAID(PropInstanceID):
"""
+ @with_phil
def set_fclose_degree(self, int close_degree):
"""(INT close_degree)
@@ -738,6 +774,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fclose_degree(self.id, <H5F_close_degree_t>close_degree)
+ @with_phil
def get_fclose_degree(self):
"""() => INT close_degree
- h5fd.
@@ -754,6 +791,7 @@ cdef class PropFAID(PropInstanceID):
return deg
+ @with_phil
def set_fapl_core(self, size_t block_size=64*1024, hbool_t backing_store=1):
"""(UINT increment=64k, BOOL backing_store=True)
@@ -770,6 +808,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_core(self.id, block_size, backing_store)
+ @with_phil
def get_fapl_core(self):
"""() => TUPLE core_settings
@@ -786,6 +825,7 @@ cdef class PropFAID(PropInstanceID):
return (increment, <bint>(backing_store))
+ @with_phil
def set_fapl_family(self, hsize_t memb_size=2147483647, PropID memb_fapl=None):
"""(UINT memb_size=2**31-1, PropFAID memb_fapl=None)
@@ -802,6 +842,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_family(self.id, memb_size, plist_id)
+ @with_phil
def get_fapl_family(self):
"""() => TUPLE info
@@ -818,11 +859,12 @@ cdef class PropFAID(PropInstanceID):
H5Pget_fapl_family(self.id, &msize, &mfapl_id)
if mfapl_id > 0:
- plist = PropFAID.open(mfapl_id)
+ plist = PropFAID(mfapl_id)
return (msize, plist)
+ @with_phil
def set_fapl_log(self, char* logfile, unsigned int flags, size_t buf_size):
"""(STRING logfile, UINT flags, UINT buf_size)
@@ -832,6 +874,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_log(self.id, logfile, flags, buf_size)
+ @with_phil
def set_fapl_sec2(self):
"""()
@@ -840,6 +883,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_sec2(self.id)
+ @with_phil
def set_fapl_stdio(self):
"""()
@@ -848,6 +892,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_stdio(self.id)
+ @with_phil
def get_driver(self):
"""() => INT driver code
@@ -867,6 +912,7 @@ cdef class PropFAID(PropInstanceID):
return H5Pget_driver(self.id)
+ @with_phil
def set_cache(self, int mdc, int rdcc, size_t rdcc_nbytes, double rdcc_w0):
"""(INT mdc, INT rdcc, UINT rdcc_nbytes, DOUBLE rdcc_w0)
@@ -876,6 +922,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_cache(self.id, mdc, rdcc, rdcc_nbytes, rdcc_w0)
+ @with_phil
def get_cache(self):
"""() => TUPLE cache info
@@ -895,6 +942,7 @@ cdef class PropFAID(PropInstanceID):
return (mdc, rdcc, rdcc_nbytes, w0)
+ @with_phil
def set_sieve_buf_size(self, size_t size):
""" (UINT size)
@@ -905,6 +953,7 @@ cdef class PropFAID(PropInstanceID):
H5Pset_sieve_buf_size(self.id, size)
+ @with_phil
def get_sieve_buf_size(self):
""" () => UINT size
@@ -914,6 +963,8 @@ cdef class PropFAID(PropInstanceID):
H5Pget_sieve_buf_size(self.id, &size)
return size
+
+ @with_phil
def set_libver_bounds(self, int low, int high):
""" (INT low, INT high)
@@ -924,6 +975,8 @@ cdef class PropFAID(PropInstanceID):
"""
H5Pset_libver_bounds(self.id, <H5F_libver_t>low, <H5F_libver_t>high)
+
+ @with_phil
def get_libver_bounds(self):
""" () => (INT low, INT high)
@@ -939,6 +992,7 @@ cdef class PropFAID(PropInstanceID):
return (<int>low, <int>high)
IF MPI:
+ @with_phil
def set_fapl_mpio(self, Comm comm not None, Info info not None):
""" (Comm comm, Info info)
@@ -950,16 +1004,37 @@ cdef class PropFAID(PropInstanceID):
H5Pset_fapl_mpio(self.id, comm.ob_mpi, info.ob_mpi)
- def set_fapl_mpiposix(self, Comm comm not None, bint use_gpfs_hints=0):
- """ (Comm comm, BOOL use_gpfs_hints=0)
+ @with_phil
+ def get_fapl_mpio(self):
+ """ () => (mpi4py.MPI.Comm, mpi4py.MPI.Info)
- Set MPI-POSIX driver.
+ Determine mpio driver MPI information.
- Comm: An mpi4py.MPI.Comm instance
- use_gpfs_hints: Enable internal hints for GPFS file system
+ 0. The mpi4py.MPI.Comm Communicator
+ 1. The mpi4py.MPI.Comm Info
"""
- H5Pset_fapl_mpiposix(self.id, comm.ob_mpi, use_gpfs_hints)
+ cdef MPI_Comm comm
+ cdef MPI_Info info
+
+ H5Pget_fapl_mpio(self.id, &comm, &info)
+ pycomm = Comm()
+ pyinfo = Info()
+ MPI_Comm_dup(comm, &pycomm.ob_mpi)
+ MPI_Info_dup(info, &pyinfo.ob_mpi)
+ MPI_Comm_free(&comm)
+ MPI_Info_free(&info)
+
+ return (pycomm, pyinfo)
+
+ @with_phil
+ def set_fapl_mpiposix(self, Comm comm not None, bint use_gpfs_hints=0):
+ """ Obsolete.
+ """
+ raise RuntimeError("MPI-POSIX driver is broken; removed in h5py 2.3.1")
+
+
+ @with_phil
def get_mdc_config(self):
"""() => CacheConfig
Returns an object that stores all the information about the meta-data cache
@@ -968,23 +1043,33 @@ cdef class PropFAID(PropInstanceID):
cdef CacheConfig config = CacheConfig()
- cdef herr_t err
- err = H5Fget_mdc_config(self.id, &config.cache_config)
- if err < 0:
- raise RuntimeError("Failed to get hit rate")
+ H5Pget_mdc_config(self.id, &config.cache_config)
return config
+
+ @with_phil
def set_mdc_config(self, CacheConfig config not None):
"""(CacheConfig) => None
Returns an object that stores all the information about the meta-data cache
configuration
"""
- # I feel this should have some sanity checking to make sure that
- cdef herr_t err
- err = H5Fset_mdc_config(self.id, &config.cache_config)
- if err < 0:
- raise RuntimeError("Failed to get hit rate")
+ H5Pset_mdc_config(self.id, &config.cache_config)
+
+ def get_alignment(self):
+ """
+ Retrieves the current settings for alignment properties from a file access property list.
+ """
+ cdef hsize_t threshold, alignment
+ H5Pget_alignment(self.id, &threshold, &alignment)
+
+ return threshold, alignment
+
+ def set_alignment(self, threshold, alignment):
+ """
+ Sets alignment properties of a file access property list.
+ """
+ H5Pset_alignment(self.id, threshold, alignment)
# Link creation
@@ -992,6 +1077,7 @@ cdef class PropLCID(PropCreateID):
""" Link creation property list """
+ @with_phil
def set_char_encoding(self, int encoding):
""" (INT encoding)
@@ -1002,6 +1088,8 @@ cdef class PropLCID(PropCreateID):
"""
H5Pset_char_encoding(self.id, <H5T_cset_t>encoding)
+
+ @with_phil
def get_char_encoding(self):
""" () => INT encoding
@@ -1014,6 +1102,8 @@ cdef class PropLCID(PropCreateID):
H5Pget_char_encoding(self.id, &encoding)
return <int>encoding
+
+ @with_phil
def set_create_intermediate_group(self, bint create):
"""(BOOL create)
@@ -1022,6 +1112,7 @@ cdef class PropLCID(PropCreateID):
H5Pset_create_intermediate_group(self.id, create)
+ @with_phil
def get_create_intermediate_group(self):
"""() => BOOL
@@ -1043,6 +1134,7 @@ cdef class PropLAID(PropInstanceID):
efree(self._buf)
+ @with_phil
def set_nlinks(self, size_t nlinks):
"""(UINT nlinks)
@@ -1051,6 +1143,7 @@ cdef class PropLAID(PropInstanceID):
H5Pset_nlinks(self.id, nlinks)
+ @with_phil
def get_nlinks(self):
"""() => UINT
@@ -1061,6 +1154,7 @@ cdef class PropLAID(PropInstanceID):
return nlinks
+ @with_phil
def set_elink_prefix(self, char* prefix):
"""(STRING prefix)
@@ -1077,6 +1171,7 @@ cdef class PropLAID(PropInstanceID):
H5Pset_elink_prefix(self.id, self._buf)
+ @with_phil
def get_elink_prefix(self):
"""() => STRING prefix
@@ -1095,6 +1190,8 @@ cdef class PropLAID(PropInstanceID):
return pstr
+
+ @with_phil
def set_elink_fapl(self, PropID fapl not None):
""" (PropFAID fapl)
@@ -1102,6 +1199,8 @@ cdef class PropLAID(PropInstanceID):
"""
H5Pset_elink_fapl(self.id, fapl.id)
+
+ @with_phil
def get_elink_fapl(self):
""" () => PropFAID fapl
@@ -1113,10 +1212,12 @@ cdef class PropLAID(PropInstanceID):
H5Idec_ref(fid)
return propwrap(fid)
+
# Group creation
cdef class PropGCID(PropOCID):
""" Group creation property list """
+ @with_phil
def set_link_creation_order(self, unsigned int flags):
""" (UINT flags)
@@ -1126,6 +1227,8 @@ cdef class PropGCID(PropOCID):
"""
H5Pset_link_creation_order(self.id, flags)
+
+ @with_phil
def get_link_creation_order(self):
""" () -> UINT flags
@@ -1145,10 +1248,14 @@ cdef class PropOCID(PropCreateID):
The documentation is somewhat hazy
"""
+
+ @with_phil
def set_obj_track_times(self,track_times):
"""Sets the recording of times associated with an object."""
H5Pset_obj_track_times(self.id,track_times)
+
+ @with_phil
def get_obj_track_times(self):
"""
Determines whether times associated with an object are being recorded.
@@ -1166,6 +1273,7 @@ cdef class PropDAID(PropInstanceID):
""" Dataset access property list """
+ @with_phil
def set_chunk_cache(self, size_t rdcc_nslots,size_t rdcc_nbytes, double rdcc_w0):
"""(size_t rdcc_nslots,size_t rdcc_nbytes, double rdcc_w0)
@@ -1173,6 +1281,8 @@ cdef class PropDAID(PropInstanceID):
"""
H5Pset_chunk_cache(self.id,rdcc_nslots,rdcc_nbytes,rdcc_w0)
+
+ @with_phil
def get_chunk_cache(self):
"""() => TUPLE chunk cache info
diff --git a/h5py/h5r.c b/h5py/h5r.c
deleted file mode 100644
index 679b4e8..0000000
--- a/h5py/h5r.c
+++ /dev/null
@@ -1,4111 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
- #define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
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-{
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-{
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- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
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- goto invalid_keyword;
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- goto bad;
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- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
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- "%s() got an unexpected keyword argument '%s'",
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- function_name, key);
- #endif
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-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
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-{
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-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
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-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
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-#else
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-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
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- tb = NULL;
- else {
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- if (PyType_Check(type)) {
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- Py_INCREF(type);
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- type = 0;
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- #else
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- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
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- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
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-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
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- tb = 0;
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- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
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- value = 0;
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- Py_INCREF(value);
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- Py_DECREF(args);
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- goto bad;
- value = owned_instance;
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- type, Py_TYPE(value));
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- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
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- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
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- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
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- Py_INCREF(tb);
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- Py_XDECREF(tmp_tb);
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- }
-bad:
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-
-static CYTHON_INLINE int __Pyx_CheckKeywordStrings(
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- int kw_allowed)
-{
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- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5r.pyx b/h5py/h5r.pyx
index 5a49533..3a42275 100644
--- a/h5py/h5r.pyx
+++ b/h5py/h5r.pyx
@@ -14,14 +14,18 @@
# Pyrex compile-time imports
from _objects cimport ObjectID
+from ._objects import phil, with_phil
+
+
# === Public constants and data structures ====================================
OBJECT = H5R_OBJECT
DATASET_REGION = H5R_DATASET_REGION
-# === Reference API ===========================================================
+# === Reference API ===========================================================
+ at with_phil
def create(ObjectID loc not None, char* name, int ref_type, ObjectID space=None):
"""(ObjectID loc, STRING name, INT ref_type, SpaceID space=None)
=> ReferenceObject ref
@@ -59,6 +63,7 @@ def create(ObjectID loc not None, char* name, int ref_type, ObjectID space=None)
return ref
+ at with_phil
def dereference(Reference ref not None, ObjectID id not None):
"""(Reference ref, ObjectID id) => ObjectID or None
@@ -75,6 +80,7 @@ def dereference(Reference ref not None, ObjectID id not None):
return h5i.wrap_identifier(H5Rdereference(id.id, <H5R_type_t>ref.typecode, &ref.ref))
+ at with_phil
def get_region(RegionReference ref not None, ObjectID id not None):
"""(Reference ref, ObjectID id) => SpaceID or None
@@ -90,9 +96,10 @@ def get_region(RegionReference ref not None, ObjectID id not None):
import h5s
if ref.typecode != H5R_DATASET_REGION or not ref:
return None
- return h5s.SpaceID.open(H5Rget_region(id.id, <H5R_type_t>ref.typecode, &ref.ref))
+ return h5s.SpaceID(H5Rget_region(id.id, <H5R_type_t>ref.typecode, &ref.ref))
+ at with_phil
def get_obj_type(Reference ref not None, ObjectID id not None):
"""(Reference ref, ObjectID id) => INT obj_code or None
@@ -115,6 +122,7 @@ def get_obj_type(Reference ref not None, ObjectID id not None):
return <int>H5Rget_obj_type(id.id, <H5R_type_t>ref.typecode, &ref.ref)
+ at with_phil
def get_name(Reference ref not None, ObjectID loc not None):
"""(Reference ref, ObjectID loc) => STRING name
@@ -133,6 +141,7 @@ def get_name(Reference ref not None, ObjectID loc not None):
finally:
free(namebuf)
+
cdef class Reference:
"""
diff --git a/h5py/h5s.c b/h5py/h5s.c
deleted file mode 100644
index e07c2d5..0000000
--- a/h5py/h5s.c
+++ /dev/null
@@ -1,6842 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
- #define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
-#endif
-#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
- #define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
- #define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
-#else
- #define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
- #define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
- (PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
- (likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
- (PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
- #define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
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- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
-}
-
-static void __Pyx_RaiseArgtupleInvalid(
- const char* func_name,
- int exact,
- Py_ssize_t num_min,
- Py_ssize_t num_max,
- Py_ssize_t num_found)
-{
- Py_ssize_t num_expected;
- const char *more_or_less;
- if (num_found < num_min) {
- num_expected = num_min;
- more_or_less = "at least";
- } else {
- num_expected = num_max;
- more_or_less = "at most";
- }
- if (exact) {
- more_or_less = "exactly";
- }
- PyErr_Format(PyExc_TypeError,
- "%s() takes %s %" CYTHON_FORMAT_SSIZE_T "d positional argument%s (%" CYTHON_FORMAT_SSIZE_T "d given)",
- func_name, more_or_less, num_expected,
- (num_expected == 1) ? "" : "s", num_found);
-}
-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
- tmp_value = tstate->curexc_value;
- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- local_type = tstate->curexc_type;
- local_value = tstate->curexc_value;
- local_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(&local_type, &local_value, &local_tb);
-#endif
- PyErr_NormalizeException(&local_type, &local_value, &local_tb);
-#if CYTHON_COMPILING_IN_CPYTHON
- if (unlikely(tstate->curexc_type))
-#else
- if (unlikely(PyErr_Occurred()))
-#endif
- goto bad;
- #if PY_MAJOR_VERSION >= 3
- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(local_type, local_value, local_tb);
-#endif
- return 0;
-bad:
- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
- }
- }
-bad:
- Py_XDECREF(owned_instance);
- return;
-}
-#endif
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (none_allowed && obj == Py_None) return 1;
- else if (exact) {
- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hssize_t(hssize_t val) {
- const hssize_t neg_one = (hssize_t)-1, const_zero = (hssize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hssize_t) == sizeof(char)) ||
- (sizeof(hssize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hssize_t) == sizeof(int)) ||
- (sizeof(hssize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hssize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hssize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5s.pyx b/h5py/h5s.pyx
index f37a03d..b8b44d9 100644
--- a/h5py/h5s.pyx
+++ b/h5py/h5s.pyx
@@ -17,11 +17,11 @@ from utils cimport require_tuple, convert_dims, convert_tuple, \
from numpy cimport ndarray
from h5py import _objects
-
+from ._objects import phil, with_phil
cdef object lockid(hid_t id_):
cdef SpaceID space
- space = SpaceID.open(id_)
+ space = SpaceID(id_)
space.locked = 1
return space
@@ -56,18 +56,20 @@ SEL_POINTS = H5S_SEL_POINTS
SEL_HYPERSLABS = H5S_SEL_HYPERSLABS
SEL_ALL = H5S_SEL_ALL
-# === Basic dataspace operations ==============================================
+# === Basic dataspace operations ==============================================
+ at with_phil
def create(int class_code):
"""(INT class_code) => SpaceID
Create a new HDF5 dataspace object, of the given class.
Legal values are SCALAR and SIMPLE.
"""
- return SpaceID.open(H5Screate(<H5S_class_t>class_code))
+ return SpaceID(H5Screate(<H5S_class_t>class_code))
+ at with_phil
def create_simple(object dims_tpl, object max_dims_tpl=None):
"""(TUPLE dims_tpl, TUPLE max_dims_tpl) => SpaceID
@@ -94,12 +96,14 @@ def create_simple(object dims_tpl, object max_dims_tpl=None):
max_dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank)
convert_tuple(max_dims_tpl, max_dims, rank)
- return SpaceID.open(H5Screate_simple(rank, dims, max_dims))
+ return SpaceID(H5Screate_simple(rank, dims, max_dims))
finally:
efree(dims)
efree(max_dims)
+
+ at with_phil
def decode(buf):
"""(STRING buf) => SpaceID
@@ -107,7 +111,8 @@ def decode(buf):
Python pickling machinery to do this.
"""
cdef char* buf_ = buf
- return SpaceID.open(H5Sdecode(buf_))
+ return SpaceID(H5Sdecode(buf_))
+
# === H5S class API ===========================================================
@@ -131,30 +136,20 @@ cdef class SpaceID(ObjectID):
""" Numpy-style shape tuple representing dimensions. () == scalar.
"""
def __get__(self):
- return self.get_simple_extent_dims()
-
-
- def _close(self):
- """()
-
- Terminate access through this identifier. You shouldn't have to
- call this manually; dataspace objects are automatically destroyed
- when their Python wrappers are freed.
- """
- with _objects.registry.lock:
- H5Sclose(self.id)
- if not self.valid:
- del _objects.registry[self.id]
+ with phil:
+ return self.get_simple_extent_dims()
+ @with_phil
def copy(self):
"""() => SpaceID
Create a new copy of this dataspace.
"""
- return SpaceID.open(H5Scopy(self.id))
+ return SpaceID(H5Scopy(self.id))
+ @with_phil
def encode(self):
"""() => STRING
@@ -176,16 +171,19 @@ cdef class SpaceID(ObjectID):
def __reduce__(self):
- return (type(self), (-1,), self.encode())
+ with phil:
+ return (type(self), (-1,), self.encode())
def __setstate__(self, state):
cdef char* buf = state
- self.id = H5Sdecode(buf)
+ with phil:
+ self.id = H5Sdecode(buf)
- # === Simple dataspaces ===================================================
+ # === Simple dataspaces ===================================================
+ @with_phil
def is_simple(self):
"""() => BOOL is_simple
@@ -195,6 +193,7 @@ cdef class SpaceID(ObjectID):
return <bint>(H5Sis_simple(self.id))
+ @with_phil
def offset_simple(self, object offset=None):
"""(TUPLE offset=None)
@@ -229,6 +228,7 @@ cdef class SpaceID(ObjectID):
efree(dims)
+ @with_phil
def get_simple_extent_ndims(self):
"""() => INT rank
@@ -237,6 +237,7 @@ cdef class SpaceID(ObjectID):
return H5Sget_simple_extent_ndims(self.id)
+ @with_phil
def get_simple_extent_dims(self, int maxdims=0):
"""(BOOL maxdims=False) => TUPLE shape
@@ -261,6 +262,7 @@ cdef class SpaceID(ObjectID):
efree(dims)
+ @with_phil
def get_simple_extent_npoints(self):
"""() => LONG npoints
@@ -269,6 +271,7 @@ cdef class SpaceID(ObjectID):
return H5Sget_simple_extent_npoints(self.id)
+ @with_phil
def get_simple_extent_type(self):
"""() => INT class_code
@@ -276,9 +279,10 @@ cdef class SpaceID(ObjectID):
"""
return <int>H5Sget_simple_extent_type(self.id)
- # === Extents =============================================================
+ # === Extents =============================================================
+ @with_phil
def extent_copy(self, SpaceID source not None):
"""(SpaceID source)
@@ -288,6 +292,7 @@ cdef class SpaceID(ObjectID):
H5Sextent_copy(self.id, source.id)
+ @with_phil
def set_extent_simple(self, object dims_tpl, object max_dims_tpl=None):
"""(TUPLE dims_tpl, TUPLE max_dims_tpl=None)
@@ -321,6 +326,7 @@ cdef class SpaceID(ObjectID):
efree(max_dims)
+ @with_phil
def set_extent_none(self):
"""()
@@ -328,9 +334,10 @@ cdef class SpaceID(ObjectID):
"""
H5Sset_extent_none(self.id)
- # === General selection operations ========================================
+ # === General selection operations ========================================
+ @with_phil
def get_select_type(self):
""" () => INT select_code
@@ -344,6 +351,7 @@ cdef class SpaceID(ObjectID):
return <int>H5Sget_select_type(self.id)
+ @with_phil
def get_select_npoints(self):
"""() => LONG npoints
@@ -353,6 +361,7 @@ cdef class SpaceID(ObjectID):
return H5Sget_select_npoints(self.id)
+ @with_phil
def get_select_bounds(self):
"""() => (TUPLE start, TUPLE end)
@@ -383,6 +392,7 @@ cdef class SpaceID(ObjectID):
efree(end)
+ @with_phil
def select_all(self):
"""()
@@ -391,6 +401,7 @@ cdef class SpaceID(ObjectID):
H5Sselect_all(self.id)
+ @with_phil
def select_none(self):
"""()
@@ -399,6 +410,7 @@ cdef class SpaceID(ObjectID):
H5Sselect_none(self.id)
+ @with_phil
def select_valid(self):
"""() => BOOL
@@ -407,9 +419,10 @@ cdef class SpaceID(ObjectID):
"""
return <bint>(H5Sselect_valid(self.id))
- # === Point selection functions ===========================================
+ # === Point selection functions ===========================================
+ @with_phil
def get_select_elem_npoints(self):
"""() => LONG npoints
@@ -418,6 +431,7 @@ cdef class SpaceID(ObjectID):
return H5Sget_select_elem_npoints(self.id)
+ @with_phil
def get_select_elem_pointlist(self):
"""() => NDARRAY
@@ -437,6 +451,7 @@ cdef class SpaceID(ObjectID):
return buf
+ @with_phil
def select_elements(self, object coords, int op=H5S_SELECT_SET):
"""(SEQUENCE coords, INT op=SELECT_SET)
@@ -472,9 +487,10 @@ cdef class SpaceID(ObjectID):
H5Sselect_elements(self.id, <H5S_seloper_t>op, nelements, <hsize_t**>hcoords.data)
- # === Hyperslab selection functions =======================================
+ # === Hyperslab selection functions =======================================
+ @with_phil
def get_select_hyper_nblocks(self):
"""() => LONG nblocks
@@ -483,6 +499,7 @@ cdef class SpaceID(ObjectID):
return H5Sget_select_hyper_nblocks(self.id)
+ @with_phil
def get_select_hyper_blocklist(self):
"""() => NDARRAY
@@ -510,6 +527,7 @@ cdef class SpaceID(ObjectID):
return buf
+ @with_phil
def select_hyperslab(self, object start, object count, object stride=None,
object block=None, int op=H5S_SELECT_SET):
"""(TUPLE start, TUPLE count, TUPLE stride=None, TUPLE block=None,
diff --git a/h5py/h5t.c b/h5py/h5t.c
deleted file mode 100644
index 963e41c..0000000
--- a/h5py/h5t.c
+++ /dev/null
@@ -1,21701 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
-#ifndef PY_LONG_LONG
- #define PY_LONG_LONG LONG_LONG
-#endif
-#ifndef Py_HUGE_VAL
- #define Py_HUGE_VAL HUGE_VAL
-#endif
-#ifdef PYPY_VERSION
-#define CYTHON_COMPILING_IN_PYPY 1
-#define CYTHON_COMPILING_IN_CPYTHON 0
-#else
-#define CYTHON_COMPILING_IN_PYPY 0
-#define CYTHON_COMPILING_IN_CPYTHON 1
-#endif
-#if PY_VERSION_HEX < 0x02050000
- typedef int Py_ssize_t;
- #define PY_SSIZE_T_MAX INT_MAX
- #define PY_SSIZE_T_MIN INT_MIN
- #define PY_FORMAT_SIZE_T ""
- #define CYTHON_FORMAT_SSIZE_T ""
- #define PyInt_FromSsize_t(z) PyInt_FromLong(z)
- #define PyInt_AsSsize_t(o) __Pyx_PyInt_AsInt(o)
- #define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
- (PyErr_Format(PyExc_TypeError, \
- "expected index value, got %.200s", Py_TYPE(o)->tp_name), \
- (PyObject*)0))
- #define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
- !PyComplex_Check(o))
- #define PyIndex_Check __Pyx_PyIndex_Check
- #define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
- #define __PYX_BUILD_PY_SSIZE_T "i"
-#else
- #define __PYX_BUILD_PY_SSIZE_T "n"
- #define CYTHON_FORMAT_SSIZE_T "z"
- #define __Pyx_PyIndex_Check PyIndex_Check
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
- #define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
- #define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
- #define PyVarObject_HEAD_INIT(type, size) \
- PyObject_HEAD_INIT(type) size,
- #define PyType_Modified(t)
- typedef struct {
- void *buf;
- PyObject *obj;
- Py_ssize_t len;
- Py_ssize_t itemsize;
- int readonly;
- int ndim;
- char *format;
- Py_ssize_t *shape;
- Py_ssize_t *strides;
- Py_ssize_t *suboffsets;
- void *internal;
- } Py_buffer;
- #define PyBUF_SIMPLE 0
- #define PyBUF_WRITABLE 0x0001
- #define PyBUF_FORMAT 0x0004
- #define PyBUF_ND 0x0008
- #define PyBUF_STRIDES (0x0010 | PyBUF_ND)
- #define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
- #define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
- #define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
- #define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
- #define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
- #define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
- typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
- typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
-#endif
-#if PY_MAJOR_VERSION < 3
- #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#else
- #define __Pyx_BUILTIN_MODULE_NAME "builtins"
- #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
- PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
-#endif
-#if PY_MAJOR_VERSION < 3 && PY_MINOR_VERSION < 6
- #define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define Py_TPFLAGS_CHECKTYPES 0
- #define Py_TPFLAGS_HAVE_INDEX 0
-#endif
-#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
- #define Py_TPFLAGS_HAVE_NEWBUFFER 0
-#endif
-#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
- #define CYTHON_PEP393_ENABLED 1
- #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
- 0 : _PyUnicode_Ready((PyObject *)(op)))
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
- #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
-#else
- #define CYTHON_PEP393_ENABLED 0
- #define __Pyx_PyUnicode_READY(op) (0)
- #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
- #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
- #define __Pyx_PyUnicode_READ(k, d, i) ((k=k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
-#endif
-#if PY_MAJOR_VERSION >= 3
- #define PyBaseString_Type PyUnicode_Type
- #define PyStringObject PyUnicodeObject
- #define PyString_Type PyUnicode_Type
- #define PyString_Check PyUnicode_Check
- #define PyString_CheckExact PyUnicode_CheckExact
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PyBytesObject PyStringObject
- #define PyBytes_Type PyString_Type
- #define PyBytes_Check PyString_Check
- #define PyBytes_CheckExact PyString_CheckExact
- #define PyBytes_FromString PyString_FromString
- #define PyBytes_FromStringAndSize PyString_FromStringAndSize
- #define PyBytes_FromFormat PyString_FromFormat
- #define PyBytes_DecodeEscape PyString_DecodeEscape
- #define PyBytes_AsString PyString_AsString
- #define PyBytes_AsStringAndSize PyString_AsStringAndSize
- #define PyBytes_Size PyString_Size
- #define PyBytes_AS_STRING PyString_AS_STRING
- #define PyBytes_GET_SIZE PyString_GET_SIZE
- #define PyBytes_Repr PyString_Repr
- #define PyBytes_Concat PyString_Concat
- #define PyBytes_ConcatAndDel PyString_ConcatAndDel
-#endif
-#if PY_VERSION_HEX < 0x02060000
- #define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
- #define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
-#endif
-#ifndef PySet_CheckExact
- #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
-#endif
-#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
-#if PY_MAJOR_VERSION >= 3
- #define PyIntObject PyLongObject
- #define PyInt_Type PyLong_Type
- #define PyInt_Check(op) PyLong_Check(op)
- #define PyInt_CheckExact(op) PyLong_CheckExact(op)
- #define PyInt_FromString PyLong_FromString
- #define PyInt_FromUnicode PyLong_FromUnicode
- #define PyInt_FromLong PyLong_FromLong
- #define PyInt_FromSize_t PyLong_FromSize_t
- #define PyInt_FromSsize_t PyLong_FromSsize_t
- #define PyInt_AsLong PyLong_AsLong
- #define PyInt_AS_LONG PyLong_AS_LONG
- #define PyInt_AsSsize_t PyLong_AsSsize_t
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- #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
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-#if PY_MAJOR_VERSION >= 3
- #define PyBoolObject PyLongObject
-#endif
-#if PY_VERSION_HEX < 0x03020000
- typedef long Py_hash_t;
- #define __Pyx_PyInt_FromHash_t PyInt_FromLong
- #define __Pyx_PyInt_AsHash_t PyInt_AsLong
-#else
- #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
- #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
-#endif
-#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
- #define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
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- #define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
-#else
- #define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
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- #define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
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-#if PY_MAJOR_VERSION >= 3
- #define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
-#else
- #define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
- #define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
- #define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
-#endif
-#if PY_VERSION_HEX < 0x02050000
- #define __Pyx_NAMESTR(n) ((char *)(n))
- #define __Pyx_DOCSTR(n) ((char *)(n))
-#else
- #define __Pyx_NAMESTR(n) (n)
- #define __Pyx_DOCSTR(n) (n)
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-
-
-#if PY_MAJOR_VERSION >= 3
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
-#else
- #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
- #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
-#endif
-
-#ifndef __PYX_EXTERN_C
- #ifdef __cplusplus
- #define __PYX_EXTERN_C extern "C"
- #else
- #define __PYX_EXTERN_C extern
- #endif
-#endif
-
-#if defined(WIN32) || defined(MS_WINDOWS)
-#define _USE_MATH_DEFINES
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-#include <math.h>
-#define __PYX_HAVE__h5py__h5t
-#define __PYX_HAVE_API__h5py__h5t
-#include "stdlib.h"
-#include "string.h"
-#include "time.h"
-#include "unistd.h"
-#include "stdint.h"
-#include "api_compat.h"
-#include "lzf_filter.h"
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-static hid_t (*__pyx_f_4h5py_4defs_H5Tvlen_create)(hid_t); /*proto*/
-static htri_t (*__pyx_f_4h5py_4defs_H5Tis_variable_str)(hid_t); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Tget_nmembers)(hid_t); /*proto*/
-static enum H5T_class_t (*__pyx_f_4h5py_4defs_H5Tget_member_class)(hid_t, int); /*proto*/
-static char *(*__pyx_f_4h5py_4defs_H5Tget_member_name)(hid_t, unsigned int); /*proto*/
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-static int (*__pyx_f_4h5py_4defs_H5Tget_member_offset)(hid_t, int); /*proto*/
-static int (*__pyx_f_4h5py_4defs_H5Tget_member_index)(hid_t, char *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Tinsert)(hid_t, char *, size_t, hid_t); /*proto*/
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-static herr_t (*__pyx_f_4h5py_4defs_H5Tenum_insert)(hid_t, char *, void *); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Tenum_nameof)(hid_t, void *, char *, size_t); /*proto*/
-static herr_t (*__pyx_f_4h5py_4defs_H5Tenum_valueof)(hid_t, char *, void *); /*proto*/
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-static int (*__pyx_f_4h5py_4defs_H5Tget_array_ndims)(hid_t); /*proto*/
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-static herr_t (*__pyx_f_4h5py_4defs_H5Tset_tag)(hid_t, char *); /*proto*/
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-static H5T_conv_t (*__pyx_f_4h5py_4defs_H5Tfind)(hid_t, hid_t, H5T_cdata_t **); /*proto*/
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-static PyObject *__pyx_v_4h5py_3h5t__uint_be = 0;
-static PyObject *__pyx_v_4h5py_3h5t__uint_nt = 0;
-static struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_f_4h5py_3h5t_typewrap(hid_t, int __pyx_skip_dispatch); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_f_4h5py_3h5t_py_create(PyObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_3h5t_py_create *__pyx_optional_args); /*proto*/
-static PyObject *__pyx_f_4h5py_3h5t_lockid(hid_t); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_f_4h5py_3h5t__c_float(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeIntegerID *__pyx_f_4h5py_3h5t__c_int(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_f_4h5py_3h5t__c_enum(PyArray_Descr *, PyObject *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_f_4h5py_3h5t__c_bool(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeArrayID *__pyx_f_4h5py_3h5t__c_array(PyArray_Descr *, int); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeOpaqueID *__pyx_f_4h5py_3h5t__c_opaque(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_f_4h5py_3h5t__c_string(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_f_4h5py_3h5t__c_complex(PyArray_Descr *); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_f_4h5py_3h5t__c_compound(PyArray_Descr *, int); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_f_4h5py_3h5t__c_vlen_str(void); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_f_4h5py_3h5t__c_vlen_unicode(void); /*proto*/
-static struct __pyx_obj_4h5py_3h5t_TypeReferenceID *__pyx_f_4h5py_3h5t__c_ref(PyObject *); /*proto*/
-static PyArray_Descr *__pyx_f_4h5py_3h5t_py_new_enum(PyObject *, PyObject *, int __pyx_skip_dispatch); /*proto*/
-static PyObject *__pyx_f_4h5py_3h5t_py_get_enum(PyObject *, int __pyx_skip_dispatch); /*proto*/
-static PyArray_Descr *__pyx_f_4h5py_3h5t_py_new_vlen(PyObject *, int __pyx_skip_dispatch); /*proto*/
-static PyObject *__pyx_f_4h5py_3h5t_py_get_vlen(PyObject *, int __pyx_skip_dispatch); /*proto*/
-#define __Pyx_MODULE_NAME "h5py.h5t"
-int __pyx_module_is_main_h5py__h5t = 0;
-
-/* Implementation of 'h5py.h5t' */
-static PyObject *__pyx_builtin_ValueError;
-static PyObject *__pyx_builtin_TypeError;
-static PyObject *__pyx_builtin_NotImplemented;
-static PyObject *__pyx_builtin_zip;
-static PyObject *__pyx_builtin_xrange;
-static PyObject *__pyx_builtin_UnicodeDecodeError;
-static PyObject *__pyx_builtin_KeyError;
-static PyObject *__pyx_builtin_sorted;
-static PyObject *__pyx_builtin_NotImplementedError;
-static PyObject *__pyx_pf_4h5py_3h5t_typewrap(CYTHON_UNUSED PyObject *__pyx_self, hid_t __pyx_v_id_); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_2create(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_classtype, size_t __pyx_v_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_4open(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_8_objects_ObjectID *__pyx_v_group, char *__pyx_v_name); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6array_create(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_base, PyObject *__pyx_v_dims_tpl); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_8enum_create(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_base); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_10vlen_create(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_base); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12decode(CYTHON_UNUSED PyObject *__pyx_self, char *__pyx_v_buf); /* proto */
-static Py_hash_t __pyx_pf_4h5py_3h5t_6TypeID___hash__(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_2__richcmp__(PyObject *__pyx_v_self, PyObject *__pyx_v_other, int __pyx_v_how); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_4__copy__(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_5dtype___get__(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_6commit(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self, struct __pyx_obj_4h5py_8_objects_ObjectID *__pyx_v_group, char *__pyx_v_name, struct __pyx_obj_4h5py_8_objects_ObjectID *__pyx_v_lcpl); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_8committed(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_10copy(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_12equal(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_typeid); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_14lock(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_16get_class(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_18set_size(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self, size_t __pyx_v_size); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_20get_size(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_22get_super(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_24detect_class(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self, int __pyx_v_classtype); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_26_close(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_28encode(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_30__reduce__(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_6TypeID_32__setstate__(struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_self, char *__pyx_v_state); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeArrayID_get_array_ndims(struct __pyx_obj_4h5py_3h5t_TypeArrayID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeArrayID_2get_array_dims(struct __pyx_obj_4h5py_3h5t_TypeArrayID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeOpaqueID_set_tag(struct __pyx_obj_4h5py_3h5t_TypeOpaqueID *__pyx_v_self, char *__pyx_v_tag); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeOpaqueID_2get_tag(struct __pyx_obj_4h5py_3h5t_TypeOpaqueID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeStringID_is_variable_str(struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeStringID_2get_cset(struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeStringID_4set_cset(struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_v_self, int __pyx_v_cset); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeStringID_6get_strpad(struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeStringID_8set_strpad(struct __pyx_obj_4h5py_3h5t_TypeStringID *__pyx_v_self, int __pyx_v_pad); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_get_order(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_2set_order(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self, int __pyx_v_order); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_4get_precision(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_6set_precision(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self, size_t __pyx_v_precision); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_8get_offset(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_10set_offset(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self, size_t __pyx_v_offset); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_12get_pad(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_12TypeAtomicID_14set_pad(struct __pyx_obj_4h5py_3h5t_TypeAtomicID *__pyx_v_self, int __pyx_v_lsb, int __pyx_v_msb); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_13TypeIntegerID_get_sign(struct __pyx_obj_4h5py_3h5t_TypeIntegerID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_13TypeIntegerID_2set_sign(struct __pyx_obj_4h5py_3h5t_TypeIntegerID *__pyx_v_self, int __pyx_v_sign); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_get_fields(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_2set_fields(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self, size_t __pyx_v_spos, size_t __pyx_v_epos, size_t __pyx_v_esize, size_t __pyx_v_mpos, size_t __pyx_v_msize); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_4get_ebias(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_6set_ebias(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self, size_t __pyx_v_ebias); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_8get_norm(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_10set_norm(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self, int __pyx_v_norm); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_12get_inpad(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_11TypeFloatID_14set_inpad(struct __pyx_obj_4h5py_3h5t_TypeFloatID *__pyx_v_self, int __pyx_v_pad_code); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_15TypeCompositeID_get_nmembers(struct __pyx_obj_4h5py_3h5t_TypeCompositeID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_15TypeCompositeID_2get_member_name(struct __pyx_obj_4h5py_3h5t_TypeCompositeID *__pyx_v_self, int __pyx_v_member); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_15TypeCompositeID_4get_member_index(struct __pyx_obj_4h5py_3h5t_TypeCompositeID *__pyx_v_self, char *__pyx_v_name); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14TypeCompoundID_get_member_class(struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_v_self, int __pyx_v_member); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14TypeCompoundID_2get_member_offset(struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_v_self, int __pyx_v_member); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14TypeCompoundID_4get_member_type(struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_v_self, int __pyx_v_member); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14TypeCompoundID_6insert(struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_v_self, char *__pyx_v_name, size_t __pyx_v_offset, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_field); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14TypeCompoundID_8pack(struct __pyx_obj_4h5py_3h5t_TypeCompoundID *__pyx_v_self); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_10TypeEnumID_enum_insert(struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_v_self, char *__pyx_v_name, PY_LONG_LONG __pyx_v_value); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_10TypeEnumID_2enum_nameof(struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_v_self, PY_LONG_LONG __pyx_v_value); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_10TypeEnumID_4enum_valueof(struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_v_self, char *__pyx_v_name); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_10TypeEnumID_6get_member_value(struct __pyx_obj_4h5py_3h5t_TypeEnumID *__pyx_v_self, int __pyx_v_idx); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_14py_create(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_dtype_in, int __pyx_v_logical); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_16special_dtype(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_kwds); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_18check_dtype(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_kwds); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_20convert(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_src, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_dst, size_t __pyx_v_n, PyArrayObject *__pyx_v_buf, PyArrayObject *__pyx_v_bkg, struct __pyx_obj_4h5py_8_objects_ObjectID *__pyx_v_dxpl); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_22find(CYTHON_UNUSED PyObject *__pyx_self, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_src, struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_dst); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_24py_new_enum(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_dt_in, PyObject *__pyx_v_enum_vals); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_26py_get_enum(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_dt); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_28py_new_vlen(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_kind); /* proto */
-static PyObject *__pyx_pf_4h5py_3h5t_30py_get_vlen(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_dt_in); /* proto */
-static char __pyx_k_1[] = "Class must be COMPOUND or OPAQUE.";
-static char __pyx_k_3[] = "Only locked or committed types can be hashed";
-static char __pyx_k_5[] = "No NumPy equivalent for %s exists";
-static char __pyx_k_7[] = "|V";
-static char __pyx_k_8[] = "Unknown string encoding (value %d)";
-static char __pyx_k_9[] = "|S";
-static char __pyx_k_10[] = "Unknown reference type";
-static char __pyx_k_13[] = "Member index must be non-negative.";
-static char __pyx_k_19[] = "This type (class %d) is not of class ENUM";
-static char __pyx_k_20[] = "Index must be non-negative.";
-static char __pyx_k_25[] = "Unsupported float size (%s)";
-static char __pyx_k_26[] = "Illegal int kind \"%s\"";
-static char __pyx_k_27[] = "Unsupported integer size (%s)";
-static char __pyx_k_28[] = "Array shape for dtype must be a sequence or integer";
-static char __pyx_k_30[] = "Illegal length %d for complex dtype";
-static char __pyx_k_32[] = "Unrecognized reference code";
-static char __pyx_k_34[] = "Object dtype %r has no native HDF5 equivalent";
-static char __pyx_k_35[] = "No conversion path for dtype: %s";
-static char __pyx_k_36[] = "Exactly one keyword may be provided";
-static char __pyx_k_38[] = "Only byte or unicode string vlens are currently supported";
-static char __pyx_k_40[] = "Enums must be created from a 2-tuple (basetype, values_dict)";
-static char __pyx_k_42[] = "Only integer types can be used as enums";
-static char __pyx_k_44[] = "Ref class must be Reference or RegionReference";
-static char __pyx_k_46[] = "Unknown special type \"%s\"";
-static char __pyx_k_48[] = " A Numpy-style dtype object representing this object.\n ";
-static char __pyx_k_49[] = "\n HDF5 \"H5T\" data-type API\n\n This module contains the datatype identifier class TypeID, and its\n subclasses which represent things like integer/float/compound identifiers.\n The majority of the H5T API is presented as methods on these identifiers.\n";
-static char __pyx_k_53[] = "|";
-static char __pyx_k_54[] = "<";
-static char __pyx_k_55[] = ">";
-static char __pyx_k_58[] = "/home/computer/h5py/h5py/h5t.pyx";
-static char __pyx_k_59[] = "h5py.h5t";
-static char __pyx_k__3[] = "3";
-static char __pyx_k__O[] = "O";
-static char __pyx_k__c[] = "c";
-static char __pyx_k__f[] = "f";
-static char __pyx_k__i[] = "i";
-static char __pyx_k__n[] = "n";
-static char __pyx_k__u[] = "u";
-static char __pyx_k__dt[] = "dt";
-static char __pyx_k__f4[] = "f4";
-static char __pyx_k__h5[] = "h5";
-static char __pyx_k__id[] = "id";
-static char __pyx_k__iu[] = "iu";
-static char __pyx_k__np[] = "np";
-static char __pyx_k__PY3[] = "PY3";
-static char __pyx_k__bkg[] = "bkg";
-static char __pyx_k__buf[] = "buf";
-static char __pyx_k__cfg[] = "cfg";
-static char __pyx_k__dst[] = "dst";
-static char __pyx_k__lsb[] = "lsb";
-static char __pyx_k__msb[] = "msb";
-static char __pyx_k__ref[] = "ref";
-static char __pyx_k__src[] = "src";
-static char __pyx_k__str[] = "str";
-static char __pyx_k__sys[] = "sys";
-static char __pyx_k__tpl[] = "tpl";
-static char __pyx_k__val[] = "val";
-static char __pyx_k__zip[] = "zip";
-static char __pyx_k__C_S1[] = "C_S1";
-static char __pyx_k__ENUM[] = "ENUM";
-static char __pyx_k__TIME[] = "TIME";
-static char __pyx_k__VLEN[] = "VLEN";
-static char __pyx_k__base[] = "base";
-static char __pyx_k__bkg_[] = "bkg_";
-static char __pyx_k__bool[] = "bool";
-static char __pyx_k__buf_[] = "buf_";
-static char __pyx_k__copy[] = "copy";
-static char __pyx_k__data[] = "data";
-static char __pyx_k__dims[] = "dims";
-static char __pyx_k__dxpl[] = "dxpl";
-static char __pyx_k__enum[] = "enum";
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- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeAtomicID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 660; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeAtomicID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeAtomicID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 660; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeAtomicID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeAtomicID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 660; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeAtomicID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeAtomicID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeAtomicID, __pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5t_TypeAtomicID = &__pyx_type_4h5py_3h5t_TypeAtomicID;
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- __pyx_type_4h5py_3h5t_TypeIntegerID.tp_base = __pyx_ptype_4h5py_3h5t_TypeAtomicID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeIntegerID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 748; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeIntegerID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeIntegerID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 748; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeIntegerID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeIntegerID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 748; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeIntegerID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeIntegerID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeIntegerID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
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- __pyx_type_4h5py_3h5t_TypeFloatID.tp_base = __pyx_ptype_4h5py_3h5t_TypeAtomicID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeFloatID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeFloatID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeFloatID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeFloatID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeFloatID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeFloatID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeFloatID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeFloatID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5t_TypeFloatID = &__pyx_type_4h5py_3h5t_TypeFloatID;
- __pyx_vtabptr_4h5py_3h5t_TypeCompositeID = &__pyx_vtable_4h5py_3h5t_TypeCompositeID;
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- __pyx_type_4h5py_3h5t_TypeCompositeID.tp_base = __pyx_ptype_4h5py_3h5t_TypeID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeCompositeID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeCompositeID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeCompositeID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeCompositeID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeCompositeID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeCompositeID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeCompositeID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeCompositeID, __pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5t_TypeCompositeID = &__pyx_type_4h5py_3h5t_TypeCompositeID;
- __pyx_vtabptr_4h5py_3h5t_TypeEnumID = &__pyx_vtable_4h5py_3h5t_TypeEnumID;
- __pyx_vtable_4h5py_3h5t_TypeEnumID.__pyx_base = *__pyx_vtabptr_4h5py_3h5t_TypeCompositeID;
- __pyx_vtable_4h5py_3h5t_TypeEnumID.__pyx_base.__pyx_base.py_dtype = (PyObject *(*)(struct __pyx_obj_4h5py_3h5t_TypeID *))__pyx_f_4h5py_3h5t_10TypeEnumID_py_dtype;
- __pyx_vtable_4h5py_3h5t_TypeEnumID.enum_convert = (int (*)(struct __pyx_obj_4h5py_3h5t_TypeEnumID *, PY_LONG_LONG *, int))__pyx_f_4h5py_3h5t_10TypeEnumID_enum_convert;
- __pyx_type_4h5py_3h5t_TypeEnumID.tp_base = __pyx_ptype_4h5py_3h5t_TypeCompositeID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeEnumID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1048; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeEnumID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeEnumID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1048; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeEnumID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeEnumID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1048; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeEnumID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeEnumID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeEnumID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
- __pyx_ptype_4h5py_3h5t_TypeEnumID = &__pyx_type_4h5py_3h5t_TypeEnumID;
- __pyx_vtabptr_4h5py_3h5t_TypeCompoundID = &__pyx_vtable_4h5py_3h5t_TypeCompoundID;
- __pyx_vtable_4h5py_3h5t_TypeCompoundID.__pyx_base = *__pyx_vtabptr_4h5py_3h5t_TypeCompositeID;
- __pyx_vtable_4h5py_3h5t_TypeCompoundID.__pyx_base.__pyx_base.py_dtype = (PyObject *(*)(struct __pyx_obj_4h5py_3h5t_TypeID *))__pyx_f_4h5py_3h5t_14TypeCompoundID_py_dtype;
- __pyx_type_4h5py_3h5t_TypeCompoundID.tp_base = __pyx_ptype_4h5py_3h5t_TypeCompositeID;
- if (PyType_Ready(&__pyx_type_4h5py_3h5t_TypeCompoundID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 950; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetVtable(__pyx_type_4h5py_3h5t_TypeCompoundID.tp_dict, __pyx_vtabptr_4h5py_3h5t_TypeCompoundID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 950; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_SetAttrString(__pyx_m, "TypeCompoundID", (PyObject *)&__pyx_type_4h5py_3h5t_TypeCompoundID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 950; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__pyx_type_4h5py_3h5t_TypeCompoundID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5t_TypeCompoundID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5t_TypeCompoundID, __pyx_base.__pyx_base.__pyx_base.__weakref__);
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- __pyx_ptype_4h5py_5numpy_dtype = __Pyx_ImportType("numpy", "dtype", sizeof(PyArray_Descr), 0); if (unlikely(!__pyx_ptype_4h5py_5numpy_dtype)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_5numpy_ndarray = __Pyx_ImportType("numpy", "ndarray", sizeof(PyArrayObject), 0); if (unlikely(!__pyx_ptype_4h5py_5numpy_ndarray)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 71; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- __pyx_ptype_4h5py_3h5r_Reference = __Pyx_ImportType("h5py.h5r", "Reference", sizeof(struct __pyx_obj_4h5py_3h5r_Reference), 1); if (unlikely(!__pyx_ptype_4h5py_3h5r_Reference)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 21; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tcreate", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tcreate, "hid_t (enum H5T_class_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Topen", (void (**)(void))&__pyx_f_4h5py_4defs_H5Topen, "hid_t (hid_t, char *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tcommitted", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tcommitted, "htri_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tcopy", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tcopy, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tequal", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tequal, "htri_t (hid_t, hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tlock", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tlock, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_class", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_class, "enum H5T_class_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_size", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_size, "size_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_super", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_super, "hid_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tdetect_class", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tdetect_class, "htri_t (hid_t, enum H5T_class_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tclose", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tclose, "herr_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tconvert", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tconvert, "herr_t (hid_t, hid_t, size_t, void *, void *, hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_size", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_size, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_order", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_order, "H5T_order_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_order", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_order, "herr_t (hid_t, H5T_order_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_precision", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_precision, "hsize_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_precision", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_precision, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_offset", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_offset, "int (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_offset", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_offset, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_pad", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_pad, "herr_t (hid_t, H5T_pad_t *, H5T_pad_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_pad", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_pad, "herr_t (hid_t, H5T_pad_t, H5T_pad_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_sign", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_sign, "H5T_sign_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_sign", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_sign, "herr_t (hid_t, H5T_sign_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_fields", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_fields, "herr_t (hid_t, size_t *, size_t *, size_t *, size_t *, size_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_fields", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_fields, "herr_t (hid_t, size_t, size_t, size_t, size_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tget_ebias", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tget_ebias, "size_t (hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
- if (__Pyx_ImportFunction(__pyx_t_1, "H5Tset_ebias", (void (**)(void))&__pyx_f_4h5py_4defs_H5Tset_ebias, "herr_t (hid_t, size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- if (PyObject_SetAttr(__pyx_m, __pyx_n_s__VLEN, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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- if (PyObject_SetAttr(__pyx_m, __pyx_n_s__NORM_MSBSET, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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-
-static void __Pyx_RaiseArgtupleInvalid(
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-{
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-static void __Pyx_RaiseDoubleKeywordsError(
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- PyObject* kw_name)
-{
- PyErr_Format(PyExc_TypeError,
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- "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
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-
-static int __Pyx_ParseOptionalKeywords(
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-{
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- continue;
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- #if PY_MAJOR_VERSION < 3
- if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
- while (*name) {
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- && _PyString_Eq(**name, key)) {
- values[name-argnames] = value;
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- (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
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- goto arg_passed_twice;
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- argname++;
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- } else
- #endif
- if (likely(PyUnicode_Check(key))) {
- while (*name) {
- int cmp = (**name == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**name, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) {
- values[name-argnames] = value;
- break;
- }
- name++;
- }
- if (*name) continue;
- else {
- PyObject*** argname = argnames;
- while (argname != first_kw_arg) {
- int cmp = (**argname == key) ? 0 :
- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
- #endif
- PyUnicode_Compare(**argname, key);
- if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
- if (cmp == 0) goto arg_passed_twice;
- argname++;
- }
- }
- } else
- goto invalid_keyword_type;
- if (kwds2) {
- if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
- } else {
- goto invalid_keyword;
- }
- }
- return 0;
-arg_passed_twice:
- __Pyx_RaiseDoubleKeywordsError(function_name, key);
- goto bad;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- goto bad;
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
-bad:
- return -1;
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-
-static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->curexc_type;
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- tmp_tb = tstate->curexc_traceback;
- tstate->curexc_type = type;
- tstate->curexc_value = value;
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_Restore(type, value, tb);
-#endif
-}
-static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->curexc_type;
- *value = tstate->curexc_value;
- *tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
-#else
- PyErr_Fetch(type, value, tb);
-#endif
-}
-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
- value = NULL;
- else
- Py_INCREF(value);
- if (!tb || tb == Py_None)
- tb = NULL;
- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto raise_error;
- }
- }
- #if PY_VERSION_HEX < 0x02050000
- if (PyClass_Check(type)) {
- #else
- if (PyType_Check(type)) {
- #endif
-#if CYTHON_COMPILING_IN_PYPY
- if (!value) {
- Py_INCREF(Py_None);
- value = Py_None;
- }
-#endif
- PyErr_NormalizeException(&type, &value, &tb);
- } else {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto raise_error;
- }
- value = type;
- #if PY_VERSION_HEX < 0x02050000
- if (PyInstance_Check(type)) {
- type = (PyObject*) ((PyInstanceObject*)type)->in_class;
- Py_INCREF(type);
- }
- else {
- type = 0;
- PyErr_SetString(PyExc_TypeError,
- "raise: exception must be an old-style class or instance");
- goto raise_error;
- }
- #else
- type = (PyObject*) Py_TYPE(type);
- Py_INCREF(type);
- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto raise_error;
- }
- #endif
- }
- __Pyx_ErrRestore(type, value, tb);
- return;
-raise_error:
- Py_XDECREF(value);
- Py_XDECREF(type);
- Py_XDECREF(tb);
- return;
-}
-#else /* Python 3+ */
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
- PyObject* owned_instance = NULL;
- if (tb == Py_None) {
- tb = 0;
- } else if (tb && !PyTraceBack_Check(tb)) {
- PyErr_SetString(PyExc_TypeError,
- "raise: arg 3 must be a traceback or None");
- goto bad;
- }
- if (value == Py_None)
- value = 0;
- if (PyExceptionInstance_Check(type)) {
- if (value) {
- PyErr_SetString(PyExc_TypeError,
- "instance exception may not have a separate value");
- goto bad;
- }
- value = type;
- type = (PyObject*) Py_TYPE(value);
- } else if (PyExceptionClass_Check(type)) {
- PyObject *args;
- if (!value)
- args = PyTuple_New(0);
- else if (PyTuple_Check(value)) {
- Py_INCREF(value);
- args = value;
- }
- else
- args = PyTuple_Pack(1, value);
- if (!args)
- goto bad;
- owned_instance = PyEval_CallObject(type, args);
- Py_DECREF(args);
- if (!owned_instance)
- goto bad;
- value = owned_instance;
- if (!PyExceptionInstance_Check(value)) {
- PyErr_Format(PyExc_TypeError,
- "calling %R should have returned an instance of "
- "BaseException, not %R",
- type, Py_TYPE(value));
- goto bad;
- }
- } else {
- PyErr_SetString(PyExc_TypeError,
- "raise: exception class must be a subclass of BaseException");
- goto bad;
- }
- if (cause && cause != Py_None) {
- PyObject *fixed_cause;
- if (PyExceptionClass_Check(cause)) {
- fixed_cause = PyObject_CallObject(cause, NULL);
- if (fixed_cause == NULL)
- goto bad;
- }
- else if (PyExceptionInstance_Check(cause)) {
- fixed_cause = cause;
- Py_INCREF(fixed_cause);
- }
- else {
- PyErr_SetString(PyExc_TypeError,
- "exception causes must derive from "
- "BaseException");
- goto bad;
- }
- PyException_SetCause(value, fixed_cause);
- }
- PyErr_SetObject(type, value);
- if (tb) {
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* tmp_tb = tstate->curexc_traceback;
- if (tb != tmp_tb) {
- Py_INCREF(tb);
- tstate->curexc_traceback = tb;
- Py_XDECREF(tmp_tb);
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- }
-bad:
- Py_XDECREF(owned_instance);
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-#endif
-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
- const char *name, int exact)
-{
- if (!type) {
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- if (none_allowed && obj == Py_None) return 1;
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- if (Py_TYPE(obj) == type) return 1;
- }
- else {
- if (PyObject_TypeCheck(obj, type)) return 1;
- }
- PyErr_Format(PyExc_TypeError,
- "Argument '%s' has incorrect type (expected %s, got %s)",
- name, type->tp_name, Py_TYPE(obj)->tp_name);
- return 0;
-}
-
-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
- PyObject *local_type, *local_value, *local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
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- goto bad;
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- if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
- goto bad;
- #endif
- Py_INCREF(local_type);
- Py_INCREF(local_value);
- Py_INCREF(local_tb);
- *type = local_type;
- *value = local_value;
- *tb = local_tb;
-#if CYTHON_COMPILING_IN_CPYTHON
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = local_type;
- tstate->exc_value = local_value;
- tstate->exc_traceback = local_tb;
- /* Make sure tstate is in a consistent state when we XDECREF
- these objects (DECREF may run arbitrary code). */
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
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-#endif
- return 0;
-bad:
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- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static CYTHON_INLINE int __Pyx_IterFinish(void) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- PyObject* exc_type = tstate->curexc_type;
- if (unlikely(exc_type)) {
- if (likely(exc_type == PyExc_StopIteration) || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration)) {
- PyObject *exc_value, *exc_tb;
- exc_value = tstate->curexc_value;
- exc_tb = tstate->curexc_traceback;
- tstate->curexc_type = 0;
- tstate->curexc_value = 0;
- tstate->curexc_traceback = 0;
- Py_DECREF(exc_type);
- Py_XDECREF(exc_value);
- Py_XDECREF(exc_tb);
- return 0;
- } else {
- return -1;
- }
- }
- return 0;
-#else
- if (unlikely(PyErr_Occurred())) {
- if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) {
- PyErr_Clear();
- return 0;
- } else {
- return -1;
- }
- }
- return 0;
-#endif
-}
-
-static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) {
- PyErr_Format(PyExc_ValueError,
- "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected);
-}
-
-static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) {
- PyErr_Format(PyExc_ValueError,
- "need more than %" CYTHON_FORMAT_SSIZE_T "d value%s to unpack",
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-}
-
-static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) {
- PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable");
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-
-static void __Pyx_UnpackTupleError(PyObject *t, Py_ssize_t index) {
- if (t == Py_None) {
- __Pyx_RaiseNoneNotIterableError();
- } else if (PyTuple_GET_SIZE(t) < index) {
- __Pyx_RaiseNeedMoreValuesError(PyTuple_GET_SIZE(t));
- } else {
- __Pyx_RaiseTooManyValuesError(index);
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-}
-
-static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) {
- if (unlikely(retval)) {
- Py_DECREF(retval);
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- return -1;
- } else {
- return __Pyx_IterFinish();
- }
- return 0;
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-
-static CYTHON_INLINE int __Pyx_unpack_tuple2(PyObject* tuple, PyObject** pvalue1, PyObject** pvalue2,
- int is_tuple, int has_known_size, int decref_tuple) {
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- if (decref_tuple) { Py_DECREF(tuple); tuple = NULL; }
- iternext = Py_TYPE(iter)->tp_iternext;
- value1 = iternext(iter); if (unlikely(!value1)) { index = 0; goto unpacking_failed; }
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-#if CYTHON_COMPILING_IN_PYPY
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- if (unlikely(!value1)) goto bad;
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- if (unlikely(!value2)) goto bad;
-#else
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- value2 = PyTuple_GET_ITEM(tuple, 1);
- Py_INCREF(value1);
- Py_INCREF(value2);
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- }
- *pvalue1 = value1;
- *pvalue2 = value2;
- return 0;
-unpacking_failed:
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- __Pyx_RaiseNeedMoreValuesError(index);
-bad:
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- Py_XDECREF(value1);
- Py_XDECREF(value2);
- if (decref_tuple) { Py_XDECREF(tuple); }
- return -1;
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-
-static CYTHON_INLINE PyObject* __Pyx_dict_iterator(PyObject* iterable, int is_dict, PyObject* method_name,
- Py_ssize_t* p_orig_length, int* p_source_is_dict) {
- is_dict = is_dict || likely(PyDict_CheckExact(iterable));
- *p_source_is_dict = is_dict;
-#if !CYTHON_COMPILING_IN_PYPY
- if (is_dict) {
- *p_orig_length = PyDict_Size(iterable);
- Py_INCREF(iterable);
- return iterable;
- }
-#endif
- *p_orig_length = 0;
- if (method_name) {
- PyObject* iter;
- iterable = PyObject_CallMethodObjArgs(iterable, method_name, NULL);
- if (!iterable)
- return NULL;
-#if !CYTHON_COMPILING_IN_PYPY
- if (PyTuple_CheckExact(iterable) || PyList_CheckExact(iterable))
- return iterable;
-#endif
- iter = PyObject_GetIter(iterable);
- Py_DECREF(iterable);
- return iter;
- }
- return PyObject_GetIter(iterable);
-}
-static CYTHON_INLINE int __Pyx_dict_iter_next(PyObject* iter_obj, Py_ssize_t orig_length, Py_ssize_t* ppos,
- PyObject** pkey, PyObject** pvalue, PyObject** pitem, int source_is_dict) {
- PyObject* next_item;
-#if !CYTHON_COMPILING_IN_PYPY
- if (source_is_dict) {
- PyObject *key, *value;
- if (unlikely(orig_length != PyDict_Size(iter_obj))) {
- PyErr_SetString(PyExc_RuntimeError, "dictionary changed size during iteration");
- return -1;
- }
- if (unlikely(!PyDict_Next(iter_obj, ppos, &key, &value))) {
- return 0;
- }
- if (pitem) {
- PyObject* tuple = PyTuple_New(2);
- if (unlikely(!tuple)) {
- return -1;
- }
- Py_INCREF(key);
- Py_INCREF(value);
- PyTuple_SET_ITEM(tuple, 0, key);
- PyTuple_SET_ITEM(tuple, 1, value);
- *pitem = tuple;
- } else {
- if (pkey) {
- Py_INCREF(key);
- *pkey = key;
- }
- if (pvalue) {
- Py_INCREF(value);
- *pvalue = value;
- }
- }
- return 1;
- } else if (PyTuple_CheckExact(iter_obj)) {
- Py_ssize_t pos = *ppos;
- if (unlikely(pos >= PyTuple_GET_SIZE(iter_obj))) return 0;
- *ppos = pos + 1;
- next_item = PyTuple_GET_ITEM(iter_obj, pos);
- Py_INCREF(next_item);
- } else if (PyList_CheckExact(iter_obj)) {
- Py_ssize_t pos = *ppos;
- if (unlikely(pos >= PyList_GET_SIZE(iter_obj))) return 0;
- *ppos = pos + 1;
- next_item = PyList_GET_ITEM(iter_obj, pos);
- Py_INCREF(next_item);
- } else
-#endif
- {
- next_item = PyIter_Next(iter_obj);
- if (unlikely(!next_item)) {
- return __Pyx_IterFinish();
- }
- }
- if (pitem) {
- *pitem = next_item;
- } else if (pkey && pvalue) {
- if (__Pyx_unpack_tuple2(next_item, pkey, pvalue, source_is_dict, source_is_dict, 1))
- return -1;
- } else if (pkey) {
- *pkey = next_item;
- } else {
- *pvalue = next_item;
- }
- return 1;
-}
-
-static CYTHON_INLINE int __Pyx_CheckKeywordStrings(
- PyObject *kwdict,
- const char* function_name,
- int kw_allowed)
-{
- PyObject* key = 0;
- Py_ssize_t pos = 0;
-#if CPYTHON_COMPILING_IN_PYPY
- if (!kw_allowed && PyDict_Next(kwdict, &pos, &key, 0))
- goto invalid_keyword;
- return 1;
-#else
- while (PyDict_Next(kwdict, &pos, &key, 0)) {
- #if PY_MAJOR_VERSION < 3
- if (unlikely(!PyString_CheckExact(key)) && unlikely(!PyString_Check(key)))
- #endif
- if (unlikely(!PyUnicode_Check(key)))
- goto invalid_keyword_type;
- }
- if ((!kw_allowed) && unlikely(key))
- goto invalid_keyword;
- return 1;
-invalid_keyword_type:
- PyErr_Format(PyExc_TypeError,
- "%s() keywords must be strings", function_name);
- return 0;
-#endif
-invalid_keyword:
- PyErr_Format(PyExc_TypeError,
- #if PY_MAJOR_VERSION < 3
- "%s() got an unexpected keyword argument '%s'",
- function_name, PyString_AsString(key));
- #else
- "%s() got an unexpected keyword argument '%U'",
- function_name, key);
- #endif
- return 0;
-}
-
-static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_dealloc != current_tp_dealloc)
- type = type->tp_base;
- while (type && type->tp_dealloc == current_tp_dealloc)
- type = type->tp_base;
- if (type)
- type->tp_dealloc(obj);
-}
-
-static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_traverse != current_tp_traverse)
- type = type->tp_base;
- while (type && type->tp_traverse == current_tp_traverse)
- type = type->tp_base;
- if (type && type->tp_traverse)
- return type->tp_traverse(obj, v, a);
- return 0;
-}
-
-static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
- PyTypeObject* type = Py_TYPE(obj);
- while (type && type->tp_clear != current_tp_clear)
- type = type->tp_base;
- while (type && type->tp_clear == current_tp_clear)
- type = type->tp_base;
- if (type && type->tp_clear)
- type->tp_clear(obj);
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
- PyObject *empty_list = 0;
- PyObject *module = 0;
- PyObject *global_dict = 0;
- PyObject *empty_dict = 0;
- PyObject *list;
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_import = 0;
- py_import = __Pyx_GetAttrString(__pyx_b, "__import__");
- if (!py_import)
- goto bad;
- #endif
- if (from_list)
- list = from_list;
- else {
- empty_list = PyList_New(0);
- if (!empty_list)
- goto bad;
- list = empty_list;
- }
- global_dict = PyModule_GetDict(__pyx_m);
- if (!global_dict)
- goto bad;
- empty_dict = PyDict_New();
- if (!empty_dict)
- goto bad;
- #if PY_VERSION_HEX >= 0x02050000
- {
- #if PY_MAJOR_VERSION >= 3
- if (level == -1) {
- if (strchr(__Pyx_MODULE_NAME, '.')) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(1);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, 1);
- #endif
- if (!module) {
- if (!PyErr_ExceptionMatches(PyExc_ImportError))
- goto bad;
- PyErr_Clear();
- }
- }
- level = 0; /* try absolute import on failure */
- }
- #endif
- if (!module) {
- #if PY_VERSION_HEX < 0x03030000
- PyObject *py_level = PyInt_FromLong(level);
- if (!py_level)
- goto bad;
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, py_level, NULL);
- Py_DECREF(py_level);
- #else
- module = PyImport_ImportModuleLevelObject(
- name, global_dict, empty_dict, list, level);
- #endif
- }
- }
- #else
- if (level>0) {
- PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
- goto bad;
- }
- module = PyObject_CallFunctionObjArgs(py_import,
- name, global_dict, empty_dict, list, NULL);
- #endif
-bad:
- #if PY_VERSION_HEX < 0x03030000
- Py_XDECREF(py_import);
- #endif
- Py_XDECREF(empty_list);
- Py_XDECREF(empty_dict);
- return module;
-}
-
-static CYTHON_INLINE void __Pyx_RaiseImportError(PyObject *name) {
-#if PY_MAJOR_VERSION < 3
- PyErr_Format(PyExc_ImportError, "cannot import name %.230s",
- PyString_AsString(name));
-#else
- PyErr_Format(PyExc_ImportError, "cannot import name %S", name);
-#endif
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hid_t) == sizeof(char)) ||
- (sizeof(hid_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hid_t) == sizeof(int)) ||
- (sizeof(hid_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hid_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-static int __Pyx_SetVtable(PyObject *dict, void *vtable) {
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- PyObject *ob = PyCapsule_New(vtable, 0, 0);
-#else
- PyObject *ob = PyCObject_FromVoidPtr(vtable, 0);
-#endif
- if (!ob)
- goto bad;
- if (PyDict_SetItemString(dict, "__pyx_vtable__", ob) < 0)
- goto bad;
- Py_DECREF(ob);
- return 0;
-bad:
- Py_XDECREF(ob);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5t.pxd b/h5py/h5t.pxd
index 480f6bd..13e9c8c 100644
--- a/h5py/h5t.pxd
+++ b/h5py/h5t.pxd
@@ -66,6 +66,7 @@ cdef class TypeCompoundID(TypeCompositeID):
# === C API for other modules =================================================
cpdef TypeID typewrap(hid_t id_)
+cdef hid_t H5PY_OBJ
cpdef TypeID py_create(object dtype, bint logical=*)
diff --git a/h5py/h5t.pyx b/h5py/h5t.pyx
index e570717..879f1a7 100644
--- a/h5py/h5t.pyx
+++ b/h5py/h5t.pyx
@@ -23,12 +23,12 @@ from h5r cimport Reference, RegionReference
from utils cimport emalloc, efree, \
require_tuple, convert_dims, convert_tuple
-from h5py import _conv
# Runtime imports
import sys
from h5 import get_config
import numpy as np
+from ._objects import phil, with_phil
cfg = get_config()
@@ -194,9 +194,6 @@ VARIABLE = H5T_VARIABLE
CSET_ASCII = H5T_CSET_ASCII
CSET_UTF8 = H5T_CSET_UTF8
-# Custom Python object pointer type
-PYTHON_OBJECT = lockid(_conv.get_python_obj())
-
# Mini floats
IEEE_F16BE = IEEE_F32BE.copy()
IEEE_F16BE.set_fields(15, 10, 5, 0, 10)
@@ -208,6 +205,13 @@ IEEE_F16LE = IEEE_F16BE.copy()
IEEE_F16LE.set_order(H5T_ORDER_LE)
IEEE_F16LE.lock()
+# Custom Python object pointer type
+cdef hid_t H5PY_OBJ = H5Tcreate(H5T_OPAQUE, sizeof(PyObject*))
+H5Tset_tag(H5PY_OBJ, "PYTHON:OBJECT")
+H5Tlock(H5PY_OBJ)
+
+PYTHON_OBJECT = lockid(H5PY_OBJ)
+
# Translation tables for HDF5 -> NumPy dtype conversion
cdef dict _order_map = { H5T_ORDER_NONE: '|', H5T_ORDER_LE: '<', H5T_ORDER_BE: '>'}
cdef dict _sign_map = { H5T_SGN_NONE: 'u', H5T_SGN_2: 'i' }
@@ -215,7 +219,7 @@ cdef dict _sign_map = { H5T_SGN_NONE: 'u', H5T_SGN_2: 'i' }
# === General datatype operations =============================================
-
+ at with_phil
def create(int classtype, size_t size):
"""(INT classtype, UINT size) => TypeID
@@ -230,6 +234,7 @@ def create(int classtype, size_t size):
return typewrap(H5Tcreate(<H5T_class_t>classtype, size))
+ at with_phil
def open(ObjectID group not None, char* name):
"""(ObjectID group, STRING name) => TypeID
@@ -238,6 +243,7 @@ def open(ObjectID group not None, char* name):
return typewrap(H5Topen(group.id, name))
+ at with_phil
def array_create(TypeID base not None, object dims_tpl):
"""(TypeID base, TUPLE dimensions) => TypeArrayID
@@ -259,6 +265,7 @@ def array_create(TypeID base not None, object dims_tpl):
efree(dims)
+ at with_phil
def enum_create(TypeID base not None):
"""(TypeID base) => TypeID
@@ -267,6 +274,7 @@ def enum_create(TypeID base not None):
return typewrap(H5Tenum_create(base.id))
+ at with_phil
def vlen_create(TypeID base not None):
"""(TypeID base) => TypeID
@@ -278,6 +286,7 @@ def vlen_create(TypeID base not None):
return typewrap(H5Tvlen_create(base.id))
+ at with_phil
def decode(char* buf):
"""(STRING buf) => TypeID
@@ -286,6 +295,7 @@ def decode(char* buf):
"""
return typewrap(H5Tdecode(<unsigned char*>buf))
+
# === Base type class =========================================================
cdef class TypeID(ObjectID):
@@ -298,45 +308,54 @@ cdef class TypeID(ObjectID):
"""
def __hash__(self):
- if self._hash is None:
- try:
- # Try to use object header first
- return ObjectID.__hash__(self)
- except TypeError:
- # It's a transient type object
- if self.locked:
- self._hash = hash(self.encode())
- else:
- raise TypeError("Only locked or committed types can be hashed")
-
- return self._hash
+ with phil:
+ if self._hash is None:
+ try:
+ # Try to use object header first
+ return ObjectID.__hash__(self)
+ except TypeError:
+ # It's a transient type object
+ if self.locked:
+ self._hash = hash(self.encode())
+ else:
+ raise TypeError("Only locked or committed types can be hashed")
+
+ return self._hash
+
def __richcmp__(self, object other, int how):
cdef bint truthval = 0
- if how != 2 and how != 3:
- return NotImplemented
- if isinstance(other, TypeID):
- truthval = self.equal(other)
+ with phil:
+ if how != 2 and how != 3:
+ return NotImplemented
+ if isinstance(other, TypeID):
+ truthval = self.equal(other)
- if how == 2:
- return truthval
- return not truthval
+ if how == 2:
+ return truthval
+ return not truthval
+
def __copy__(self):
cdef TypeID cpy
- cpy = ObjectID.__copy__(self)
- return cpy
+ with phil:
+ cpy = ObjectID.__copy__(self)
+ return cpy
+
property dtype:
""" A Numpy-style dtype object representing this object.
"""
def __get__(self):
- return self.py_dtype()
+ with phil:
+ return self.py_dtype()
+
cdef object py_dtype(self):
raise TypeError("No NumPy equivalent for %s exists" % self.__class__.__name__)
+ @with_phil
def commit(self, ObjectID group not None, char* name, ObjectID lcpl=None):
"""(ObjectID group, STRING name, PropID lcpl=None)
@@ -346,6 +365,8 @@ cdef class TypeID(ObjectID):
H5Tcommit2(group.id, name, self.id, pdefault(lcpl),
H5P_DEFAULT, H5P_DEFAULT)
+
+ @with_phil
def committed(self):
"""() => BOOL is_comitted
@@ -353,7 +374,8 @@ cdef class TypeID(ObjectID):
"""
return <bint>(H5Tcommitted(self.id))
-
+
+ @with_phil
def copy(self):
"""() => TypeID
@@ -362,6 +384,7 @@ cdef class TypeID(ObjectID):
return typewrap(H5Tcopy(self.id))
+ @with_phil
def equal(self, TypeID typeid):
"""(TypeID typeid) => BOOL
@@ -371,6 +394,7 @@ cdef class TypeID(ObjectID):
return <bint>(H5Tequal(self.id, typeid.id))
+ @with_phil
def lock(self):
"""()
@@ -381,6 +405,7 @@ cdef class TypeID(ObjectID):
self.locked = 1
+ @with_phil
def get_class(self):
"""() => INT classcode
@@ -388,7 +413,8 @@ cdef class TypeID(ObjectID):
"""
return <int>H5Tget_class(self.id)
-
+
+ @with_phil
def set_size(self, size_t size):
"""(UINT size)
@@ -397,6 +423,7 @@ cdef class TypeID(ObjectID):
H5Tset_size(self.id, size)
+ @with_phil
def get_size(self):
""" () => INT size
@@ -405,6 +432,7 @@ cdef class TypeID(ObjectID):
return H5Tget_size(self.id)
+ @with_phil
def get_super(self):
"""() => TypeID
@@ -412,7 +440,8 @@ cdef class TypeID(ObjectID):
"""
return typewrap(H5Tget_super(self.id))
-
+
+ @with_phil
def detect_class(self, int classtype):
"""(INT classtype) => BOOL class_is_present
@@ -421,19 +450,8 @@ cdef class TypeID(ObjectID):
"""
return <bint>(H5Tdetect_class(self.id, <H5T_class_t>classtype))
-
- def _close(self):
- """()
-
- Close this datatype. If it's locked, nothing happens.
-
- You shouldn't ordinarily need to call this function; datatype
- objects are automatically closed when they're deallocated.
- """
- if not self.locked:
- H5Tclose(self.id)
-
+ @with_phil
def encode(self):
"""() => STRING
@@ -456,11 +474,13 @@ cdef class TypeID(ObjectID):
def __reduce__(self):
- return (type(self), (-1,), self.encode())
+ with phil:
+ return (type(self), (-1,), self.encode())
def __setstate__(self, char* state):
- self.id = H5Tdecode(<unsigned char*>state)
+ with phil:
+ self.id = H5Tdecode(<unsigned char*>state)
# === Top-level classes (inherit directly from TypeID) ========================
@@ -472,6 +492,7 @@ cdef class TypeArrayID(TypeID):
"""
+ @with_phil
def get_array_ndims(self):
"""() => INT rank
@@ -480,6 +501,7 @@ cdef class TypeArrayID(TypeID):
return H5Tget_array_ndims(self.id)
+ @with_phil
def get_array_dims(self):
"""() => TUPLE dimensions
@@ -515,6 +537,7 @@ cdef class TypeOpaqueID(TypeID):
"""
+ @with_phil
def set_tag(self, char* tag):
"""(STRING tag)
@@ -524,6 +547,7 @@ cdef class TypeOpaqueID(TypeID):
H5Tset_tag(self.id, tag)
+ @with_phil
def get_tag(self):
"""() => STRING tag
@@ -543,6 +567,7 @@ cdef class TypeOpaqueID(TypeID):
# Numpy translation function for opaque types
return dtype("|V" + str(self.get_size()))
+
cdef class TypeStringID(TypeID):
"""
@@ -550,6 +575,7 @@ cdef class TypeStringID(TypeID):
"""
+ @with_phil
def is_variable_str(self):
"""() => BOOL is_variable
@@ -558,6 +584,7 @@ cdef class TypeStringID(TypeID):
return <bint>(H5Tis_variable_str(self.id))
+ @with_phil
def get_cset(self):
"""() => INT character_set
@@ -566,6 +593,7 @@ cdef class TypeStringID(TypeID):
return <int>H5Tget_cset(self.id)
+ @with_phil
def set_cset(self, int cset):
"""(INT character_set)
@@ -574,6 +602,7 @@ cdef class TypeStringID(TypeID):
H5Tset_cset(self.id, <H5T_cset_t>cset)
+ @with_phil
def get_strpad(self):
"""() => INT padding_type
@@ -591,6 +620,7 @@ cdef class TypeStringID(TypeID):
return <int>H5Tget_strpad(self.id)
+ @with_phil
def set_strpad(self, int pad):
"""(INT pad)
@@ -607,6 +637,7 @@ cdef class TypeStringID(TypeID):
"""
H5Tset_strpad(self.id, <H5T_str_t>pad)
+
cdef object py_dtype(self):
# Numpy translation function for string types
if self.is_variable_str():
@@ -624,7 +655,14 @@ cdef class TypeVlenID(TypeID):
"""
Non-string vlen datatypes.
"""
- pass
+
+ cdef object py_dtype(self):
+
+ # get base type id
+ cdef TypeID base_type
+ base_type = self.get_super()
+
+ return special_dtype(vlen=base_type.dtype)
cdef class TypeTimeID(TypeID):
@@ -664,6 +702,7 @@ cdef class TypeAtomicID(TypeID):
"""
+ @with_phil
def get_order(self):
"""() => INT order
@@ -675,6 +714,7 @@ cdef class TypeAtomicID(TypeID):
return <int>H5Tget_order(self.id)
+ @with_phil
def set_order(self, int order):
"""(INT order)
@@ -686,6 +726,7 @@ cdef class TypeAtomicID(TypeID):
H5Tset_order(self.id, <H5T_order_t>order)
+ @with_phil
def get_precision(self):
"""() => UINT precision
@@ -694,6 +735,7 @@ cdef class TypeAtomicID(TypeID):
return H5Tget_precision(self.id)
+ @with_phil
def set_precision(self, size_t precision):
"""(UINT precision)
@@ -702,6 +744,7 @@ cdef class TypeAtomicID(TypeID):
H5Tset_precision(self.id, precision)
+ @with_phil
def get_offset(self):
"""() => INT offset
@@ -710,6 +753,7 @@ cdef class TypeAtomicID(TypeID):
return H5Tget_offset(self.id)
+ @with_phil
def set_offset(self, size_t offset):
"""(UINT offset)
@@ -718,6 +762,7 @@ cdef class TypeAtomicID(TypeID):
H5Tset_offset(self.id, offset)
+ @with_phil
def get_pad(self):
"""() => (INT lsb_pad_code, INT msb_pad_code)
@@ -733,6 +778,7 @@ cdef class TypeAtomicID(TypeID):
return (<int>lsb, <int>msb)
+ @with_phil
def set_pad(self, int lsb, int msb):
"""(INT lsb_pad_code, INT msb_pad_code)
@@ -752,6 +798,7 @@ cdef class TypeIntegerID(TypeAtomicID):
"""
+ @with_phil
def get_sign(self):
"""() => INT sign
@@ -766,6 +813,7 @@ cdef class TypeIntegerID(TypeAtomicID):
return <int>H5Tget_sign(self.id)
+ @with_phil
def set_sign(self, int sign):
"""(INT sign)
@@ -792,6 +840,7 @@ cdef class TypeFloatID(TypeAtomicID):
"""
+ @with_phil
def get_fields(self):
"""() => TUPLE field_info
@@ -809,6 +858,7 @@ cdef class TypeFloatID(TypeAtomicID):
return (spos, epos, esize, mpos, msize)
+ @with_phil
def set_fields(self, size_t spos, size_t epos, size_t esize,
size_t mpos, size_t msize):
"""(UINT spos, UINT epos, UINT esize, UINT mpos, UINT msize)
@@ -819,6 +869,7 @@ cdef class TypeFloatID(TypeAtomicID):
H5Tset_fields(self.id, spos, epos, esize, mpos, msize)
+ @with_phil
def get_ebias(self):
"""() => UINT ebias
@@ -827,6 +878,7 @@ cdef class TypeFloatID(TypeAtomicID):
return H5Tget_ebias(self.id)
+ @with_phil
def set_ebias(self, size_t ebias):
"""(UINT ebias)
@@ -835,6 +887,7 @@ cdef class TypeFloatID(TypeAtomicID):
H5Tset_ebias(self.id, ebias)
+ @with_phil
def get_norm(self):
"""() => INT normalization_code
@@ -847,6 +900,7 @@ cdef class TypeFloatID(TypeAtomicID):
return <int>H5Tget_norm(self.id)
+ @with_phil
def set_norm(self, int norm):
"""(INT normalization_code)
@@ -859,6 +913,7 @@ cdef class TypeFloatID(TypeAtomicID):
H5Tset_norm(self.id, <H5T_norm_t>norm)
+ @with_phil
def get_inpad(self):
"""() => INT pad_code
@@ -871,6 +926,7 @@ cdef class TypeFloatID(TypeAtomicID):
return <int>H5Tget_inpad(self.id)
+ @with_phil
def set_inpad(self, int pad_code):
"""(INT pad_code)
@@ -882,6 +938,7 @@ cdef class TypeFloatID(TypeAtomicID):
"""
H5Tset_inpad(self.id, <H5T_pad_t>pad_code)
+
cdef object py_dtype(self):
# Translation function for floating-point types
size = self.get_size() # int giving number of bytes
@@ -908,6 +965,7 @@ cdef class TypeCompositeID(TypeID):
"""
+ @with_phil
def get_nmembers(self):
"""() => INT number_of_members
@@ -916,6 +974,7 @@ cdef class TypeCompositeID(TypeID):
return H5Tget_nmembers(self.id)
+ @with_phil
def get_member_name(self, int member):
"""(INT member) => STRING name
@@ -938,6 +997,7 @@ cdef class TypeCompositeID(TypeID):
return pyname
+ @with_phil
def get_member_index(self, char* name):
"""(STRING name) => INT index
@@ -954,7 +1014,7 @@ cdef class TypeCompoundID(TypeCompositeID):
"""
-
+ @with_phil
def get_member_class(self, int member):
"""(INT member) => INT class
@@ -966,7 +1026,7 @@ cdef class TypeCompoundID(TypeCompositeID):
return H5Tget_member_class(self.id, member)
-
+ @with_phil
def get_member_offset(self, int member):
"""(INT member) => INT offset
@@ -977,7 +1037,8 @@ cdef class TypeCompoundID(TypeCompositeID):
raise ValueError("Member index must be non-negative.")
return H5Tget_member_offset(self.id, member)
-
+
+ @with_phil
def get_member_type(self, int member):
"""(INT member) => TypeID
@@ -989,6 +1050,7 @@ cdef class TypeCompoundID(TypeCompositeID):
return typewrap(H5Tget_member_type(self.id, member))
+ @with_phil
def insert(self, char* name, size_t offset, TypeID field not None):
"""(STRING name, UINT offset, TypeID field)
@@ -999,6 +1061,7 @@ cdef class TypeCompoundID(TypeCompositeID):
H5Tinsert(self.id, name, offset, field.id)
+ @with_phil
def pack(self):
"""()
@@ -1045,6 +1108,7 @@ cdef class TypeCompoundID(TypeCompositeID):
return typeobj
+
cdef class TypeEnumID(TypeCompositeID):
"""
@@ -1074,7 +1138,8 @@ cdef class TypeEnumID(TypeCompositeID):
finally:
H5Tclose(basetype)
-
+
+ @with_phil
def enum_insert(self, char* name, long long value):
"""(STRING name, INT/LONG value)
@@ -1090,6 +1155,7 @@ cdef class TypeEnumID(TypeCompositeID):
H5Tenum_insert(self.id, name, &buf)
+ @with_phil
def enum_nameof(self, long long value):
"""(LONG value) => STRING name
@@ -1109,6 +1175,7 @@ cdef class TypeEnumID(TypeCompositeID):
return retstring
+ @with_phil
def enum_valueof(self, char* name):
"""(STRING name) => LONG value
@@ -1121,6 +1188,7 @@ cdef class TypeEnumID(TypeCompositeID):
return buf
+ @with_phil
def get_member_value(self, int idx):
"""(UINT index) => LONG value
@@ -1376,6 +1444,7 @@ cdef TypeReferenceID _c_ref(object refclass):
return STD_REF_DSETREG
raise TypeError("Unrecognized reference code")
+
cpdef TypeID py_create(object dtype_in, bint logical=0):
"""(OBJECT dtype_in, BOOL logical=False) => TypeID
@@ -1396,74 +1465,79 @@ cpdef TypeID py_create(object dtype_in, bint logical=0):
cdef dtype dt = dtype(dtype_in)
cdef char kind = dt.kind
- # Float
- if kind == c'f':
- return _c_float(dt)
+ with phil:
+ # Float
+ if kind == c'f':
+ return _c_float(dt)
- # Integer
- elif kind == c'u' or kind == c'i':
-
- if logical:
- # Check for an enumeration hint
- enum_vals = check_dtype(enum=dt)
- if enum_vals is not None:
- return _c_enum(dt, enum_vals)
-
- return _c_int(dt)
-
- # Complex
- elif kind == c'c':
- return _c_complex(dt)
-
- # Compound
- elif kind == c'V' and dt.names is not None:
- return _c_compound(dt, logical)
+ # Integer
+ elif kind == c'u' or kind == c'i':
- # Array or opaque
- elif kind == c'V':
- if dt.subdtype is not None:
- return _c_array(dt, logical)
- else:
- return _c_opaque(dt)
-
- # String
- elif kind == c'S':
- return _c_string(dt)
+ if logical:
+ # Check for an enumeration hint
+ enum_vals = check_dtype(enum=dt)
+ if enum_vals is not None:
+ return _c_enum(dt, enum_vals)
- # Boolean
- elif kind == c'b':
- return _c_bool(dt)
+ return _c_int(dt)
- # Object types (including those with vlen hints)
- elif kind == c'O':
+ # Complex
+ elif kind == c'c':
+ return _c_complex(dt)
- if logical:
- vlen = check_dtype(vlen=dt)
- if vlen is bytes:
- return _c_vlen_str()
- elif vlen is unicode:
- return _c_vlen_unicode()
+ # Compound
+ elif kind == c'V' and dt.names is not None:
+ return _c_compound(dt, logical)
- refclass = check_dtype(ref=dt)
- if refclass is not None:
+ # Array or opaque
+ elif kind == c'V':
+ if dt.subdtype is not None:
+ return _c_array(dt, logical)
+ else:
+ return _c_opaque(dt)
+
+ # String
+ elif kind == c'S':
+ return _c_string(dt)
+
+ # Boolean
+ elif kind == c'b':
+ return _c_bool(dt)
+
+ # Object types (including those with vlen hints)
+ elif kind == c'O':
+
+ if logical:
+ vlen = check_dtype(vlen=dt)
+ if vlen is bytes:
+ return _c_vlen_str()
+ elif vlen is unicode:
+ return _c_vlen_unicode()
+ elif vlen is not None:
+ return vlen_create(py_create(vlen))
+
+ refclass = check_dtype(ref=dt)
+ if refclass is not None:
return _c_ref(refclass)
- raise TypeError("Object dtype %r has no native HDF5 equivalent" % (dt,))
+ raise TypeError("Object dtype %r has no native HDF5 equivalent" % (dt,))
- return PYTHON_OBJECT
+ return PYTHON_OBJECT
+
+ # Unrecognized
+ else:
+ raise TypeError("No conversion path for dtype: %s" % repr(dt))
- # Unrecognized
- else:
- raise TypeError("No conversion path for dtype: %s" % repr(dt))
+ at with_phil
def special_dtype(**kwds):
""" Create a new h5py "special" type. Only one keyword may be given.
Legal keywords are:
vlen = basetype
- Base type for HDF5 variable-length datatype. Currently only the
- builtin string class (str) is allowed.
+ Base type for HDF5 variable-length datatype. This can be Python
+ str type or instance of np.dtype.
Example: special_dtype( vlen=str )
enum = (basetype, values_dict)
@@ -1482,10 +1556,8 @@ def special_dtype(**kwds):
name, val = kwds.popitem()
if name == 'vlen':
- if val not in (bytes, unicode):
- raise NotImplementedError("Only byte or unicode string vlens are currently supported")
- return dtype(('O', [( ({'type': val},'vlen'), 'O' )] ))
+ return dtype('O', metadata={'vlen': val})
if name == 'enum':
@@ -1498,17 +1570,19 @@ def special_dtype(**kwds):
if dt.kind not in "iu":
raise TypeError("Only integer types can be used as enums")
- return dtype((dt, [( ({'vals': enum_vals},'enum'), dt )] ))
+ return dtype(dt, metadata={'enum': enum_vals})
if name == 'ref':
if val not in (Reference, RegionReference):
raise ValueError("Ref class must be Reference or RegionReference")
- return dtype(('O', [( ({'type': val},'ref'), 'O' )] ))
+ return dtype('O', metadata={'ref': val})
raise TypeError('Unknown special type "%s"' % name)
+
+ at with_phil
def check_dtype(**kwds):
""" Check a dtype for h5py special type "hint" information. Only one
keyword may be given.
@@ -1537,17 +1611,15 @@ def check_dtype(**kwds):
if name not in ('vlen', 'enum', 'ref'):
raise TypeError('Unknown special type "%s"' % name)
- hintkey = 'type' if name is not 'enum' else 'vals'
-
- if dt.fields is not None and name in dt.fields:
- tpl = dt.fields[name]
- if len(tpl) == 3:
- hint_dict = tpl[2]
- if hintkey in hint_dict:
- return hint_dict[hintkey]
+ try:
+ return dt.metadata[name]
+ except TypeError:
+ return None
+ except KeyError:
+ return None
- return None
+ at with_phil
def convert(TypeID src not None, TypeID dst not None, size_t n,
ndarray buf not None, ndarray bkg=None, ObjectID dxpl=None):
""" (TypeID src, TypeID dst, UINT n, NDARRAY buf, NDARRAY bkg=None,
@@ -1569,6 +1641,8 @@ def convert(TypeID src not None, TypeID dst not None, size_t n,
H5Tconvert(src.id, dst.id, n, buf_, bkg_, pdefault(dxpl))
+
+ at with_phil
def find(TypeID src not None, TypeID dst not None):
""" (TypeID src, TypeID dst) => TUPLE or None
@@ -1589,6 +1663,7 @@ def find(TypeID src not None, TypeID dst not None):
except:
return None
+
# ============================================================================
# Deprecated functions
diff --git a/h5py/h5z.c b/h5py/h5z.c
deleted file mode 100644
index fd8b8b4..0000000
--- a/h5py/h5z.c
+++ /dev/null
@@ -1,2210 +0,0 @@
-/* Generated by Cython 0.18 on Mon Dec 9 16:00:33 2013 */
-
-#define PY_SSIZE_T_CLEAN
-#include "Python.h"
-#ifndef Py_PYTHON_H
- #error Python headers needed to compile C extensions, please install development version of Python.
-#elif PY_VERSION_HEX < 0x02040000
- #error Cython requires Python 2.4+.
-#else
-#include <stddef.h> /* For offsetof */
-#ifndef offsetof
-#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
-#endif
-#if !defined(WIN32) && !defined(MS_WINDOWS)
- #ifndef __stdcall
- #define __stdcall
- #endif
- #ifndef __cdecl
- #define __cdecl
- #endif
- #ifndef __fastcall
- #define __fastcall
- #endif
-#endif
-#ifndef DL_IMPORT
- #define DL_IMPORT(t) t
-#endif
-#ifndef DL_EXPORT
- #define DL_EXPORT(t) t
-#endif
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-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
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-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
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- long val = __Pyx_PyInt_AsLong(x);
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- PyErr_SetString(PyExc_OverflowError,
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- "can't convert negative value to int" :
- "value too large to convert to int");
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-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
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- long val = __Pyx_PyInt_AsLong(x);
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- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
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- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
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- long val = __Pyx_PyInt_AsLong(x);
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- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
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- return (signed short)val;
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- return (signed short)__Pyx_PyInt_AsSignedLong(x);
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-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
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- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
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- return (int)-1;
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- return (int)val;
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- return (int)__Pyx_PyInt_AsLong(x);
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-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
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-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/h5z.pyx b/h5py/h5z.pyx
index 4b82199..68974f5 100644
--- a/h5py/h5z.pyx
+++ b/h5py/h5z.pyx
@@ -11,6 +11,9 @@
Filter API and constants.
"""
+from ._objects import phil, with_phil
+
+
# === Public constants and data structures ====================================
FILTER_LZF = H5PY_FILTER_LZF
@@ -56,7 +59,7 @@ NO_EDC = H5Z_NO_EDC
# === Filter API =============================================================
-
+ at with_phil
def filter_avail(int filter_code):
"""(INT filter_code) => BOOL
@@ -71,6 +74,7 @@ def filter_avail(int filter_code):
return <bint>H5Zfilter_avail(<H5Z_filter_t>filter_code)
+ at with_phil
def get_filter_info(int filter_code):
"""(INT filter_code) => INT filter_flags
diff --git a/h5py/ipy_completer.py b/h5py/ipy_completer.py
index 3de34d3..4266562 100644
--- a/h5py/ipy_completer.py
+++ b/h5py/ipy_completer.py
@@ -39,13 +39,23 @@ import posixpath
import re
try:
+ # >=ipython-1.0
+ from IPython import get_ipython
+except ImportError:
+ try:
+ # support >=ipython-0.11, <ipython-1.0
+ from IPython.core.ipapi import get as get_ipython
+ except ImportError:
+ # support <ipython-0.11
+ from IPython.ipapi import get as get_ipython
+try:
+ # support >=ipython-0.11
from IPython.utils import generics
- from IPython.core.error import TryNext
- from IPython.core.ipapi import get as ipget
+ from IPython import TryNext
except ImportError:
# support <ipython-0.11
from IPython import generics
- from IPython.ipapi import TryNext, get as ipget
+ from IPython.ipapi import TryNext
import readline
@@ -116,19 +126,19 @@ def h5py_attr_completer(context, command):
omit__names = None
try:
# support >=ipython-0.12
- omit__names = ipget().Completer.omit__names
+ omit__names = get_ipython().Completer.omit__names
except AttributeError:
pass
if omit__names is None:
try:
# support ipython-0.11
- omit__names = ipget().readline_omit__names
+ omit__names = get_ipython().readline_omit__names
except AttributeError:
pass
if omit__names is None:
try:
# support <ipython-0.11
- omit__names = ipget().options.readline_omit__names
+ omit__names = get_ipython().options.readline_omit__names
except AttributeError:
omit__names = 0
if omit__names == 1:
@@ -162,5 +172,5 @@ def h5py_completer(self, event):
def load_ipython_extension(ip=None):
if ip is None:
- ip = ipget()
+ ip = get_ipython()
ip.set_hook('complete_command', h5py_completer, re_key=r"(?:.*\=)?(.+?)\[")
diff --git a/h5py/lowtest/__init__.py b/h5py/lowtest/__init__.py
deleted file mode 100644
index a23327b..0000000
--- a/h5py/lowtest/__init__.py
+++ /dev/null
@@ -1,8 +0,0 @@
-# This file is part of h5py, a Python interface to the HDF5 library.
-#
-# http://www.h5py.org
-#
-# Copyright 2008-2013 Andrew Collette and contributors
-#
-# License: Standard 3-clause BSD; see "license.txt" for full license terms
-# and contributor agreement.
diff --git a/h5py/tests/__init__.py b/h5py/tests/__init__.py
new file mode 100644
index 0000000..06127ef
--- /dev/null
+++ b/h5py/tests/__init__.py
@@ -0,0 +1,41 @@
+# This file is part of h5py, a Python interface to the HDF5 library.
+#
+# http://www.h5py.org
+#
+# Copyright 2008-2013 Andrew Collette and contributors
+#
+# License: Standard 3-clause BSD; see "license.txt" for full license terms
+# and contributor agreement.
+
+from __future__ import print_function
+
+import sys
+from .common import ut
+
+from . import old, hl
+
+MODULES = old.MODULES + hl.MODULES
+
+
+def mname(obj):
+ """ Get the full dotted name of the test method """
+ mod_name = obj.__class__.__module__.replace('h5py.tests.','')
+ return "%s.%s.%s" % (mod_name, obj.__class__.__name__, obj._testMethodName)
+
+
+def run_tests(verbose=False):
+ """ Run tests with TextTestRunner. Returns a TestResult instance.
+
+ """
+ suite = ut.TestSuite()
+ for m in MODULES:
+ suite.addTests(ut.defaultTestLoader.loadTestsFromModule(m))
+ result = ut.TextTestRunner(verbosity=1).run(suite)
+
+ if verbose:
+ for (case, reason) in result.skipped:
+ print("S %s (%s)" % (mname(case), reason), file=sys.stderr)
+ for (case, reason) in result.expectedFailures:
+ print("X %s" % mname(case), file=sys.stderr)
+
+ return result
\ No newline at end of file
diff --git a/h5py/_hl/tests/common.py b/h5py/tests/common.py
similarity index 66%
copy from h5py/_hl/tests/common.py
copy to h5py/tests/common.py
index d41e4e6..7c211a8 100644
--- a/h5py/_hl/tests/common.py
+++ b/h5py/tests/common.py
@@ -8,12 +8,11 @@
# and contributor agreement.
import sys
-
-if sys.version_info[0] == 3:
- py3 = True
-else:
- py3 = False
-
+import os
+import shutil
+import tempfile
+import numpy as np
+import h5py
if sys.version_info >= (2, 7) or sys.version_info >= (3, 2):
import unittest as ut
@@ -26,14 +25,35 @@ else:
% (sys.version_info[:2])
)
-import shutil
-import tempfile
-import numpy as np
-import os
+
+if sys.version_info[0] == 3:
+ PY3 = True
+else:
+ PY3 = False
+
+
+# Check if non-ascii filenames are supported
+# Evidently this is the most reliable way to check
+# See also h5py issue #263 and ipython #466
+# To test for this, run the testsuite with LC_ALL=C
+try:
+ testfile, fname = tempfile.mkstemp(u'\u03b7')
+except UnicodeError:
+ UNICODE_FILENAMES = False
+else:
+ UNICODE_FILENAMES = True
+ os.close(testfile)
+ os.unlink(fname)
+ del fname
+ del testfile
class TestCase(ut.TestCase):
+ """
+ Base class for unit tests.
+ """
+
@classmethod
def setUpClass(cls):
cls.tempdir = tempfile.mkdtemp(prefix='h5py-test_')
@@ -46,6 +66,16 @@ class TestCase(ut.TestCase):
if dir is None:
dir = self.tempdir
return tempfile.mktemp(suffix, prefix, dir=self.tempdir)
+
+ def setUp(self):
+ self.f = h5py.File(self.mktemp(), 'w')
+
+ def tearDown(self):
+ try:
+ if self.f:
+ self.f.close()
+ except:
+ pass
if not hasattr(ut.TestCase, 'assertSameElements'):
# shim until this is ported into unittest2
@@ -98,22 +128,38 @@ class TestCase(ut.TestCase):
dset.dtype == arr.dtype,
"Dtype mismatch (%s vs %s)%s" % (dset.dtype, arr.dtype, message)
)
- self.assert_(
- np.all(np.abs(dset[...] - arr[...]) < precision),
- "Arrays differ by more than %.3f%s" % (precision, message)
- )
+
+ if arr.dtype.names is not None:
+ for n in arr.dtype.names:
+ message = '[FIELD %s] %s' % (n, message)
+ self.assertArrayEqual(dset[n], arr[n], message=message, precision=precision)
+ elif arr.dtype.kind in ('i', 'f'):
+ self.assert_(
+ np.all(np.abs(dset[...] - arr[...]) < precision),
+ "Arrays differ by more than %.3f%s" % (precision, message)
+ )
+ else:
+ self.assert_(
+ np.all(dset[...] == arr[...]),
+ "Arrays are not equal (dtype %s) %s" % (arr.dtype.str, message)
+ )
-# Check if non-ascii filenames are supported
-# Evidently this is the most reliable way to check
-# See also h5py issue #263 and ipython #466
-# To test for this, run the testsuite with LC_ALL=C
-try:
- testfile, fname = tempfile.mkstemp(u'\u03b7')
-except UnicodeError:
- unicode_filenames = False
-else:
- unicode_filenames = True
- os.close(testfile)
- os.unlink(fname)
- del fname
- del testfile
+ def assertNumpyBehavior(self, dset, arr, s):
+ """ Apply slicing arguments "s" to both dset and arr.
+
+ Succeeds if the results of the slicing are identical, or the
+ exception raised is of the same type for both.
+
+ "arr" must be a Numpy array; "dset" may be a NumPy array or dataset.
+ """
+ exc = None
+ try:
+ arr_result = arr[s]
+ except Exception as e:
+ exc = type(e)
+
+ if exc is None:
+ self.assertArrayEqual(dset[s], arr_result)
+ else:
+ with self.assertRaises(exc):
+ dset[s]
\ No newline at end of file
diff --git a/h5py/tests/hl/__init__.py b/h5py/tests/hl/__init__.py
new file mode 100644
index 0000000..958b083
--- /dev/null
+++ b/h5py/tests/hl/__init__.py
@@ -0,0 +1,7 @@
+from . import (test_dataset_getitem,
+ test_dims_dimensionproxy,
+ test_file, )
+
+MODULES = ( test_dataset_getitem,
+ test_dims_dimensionproxy,
+ test_file, )
\ No newline at end of file
diff --git a/h5py/tests/hl/test_dataset_getitem.py b/h5py/tests/hl/test_dataset_getitem.py
new file mode 100644
index 0000000..edcc9a5
--- /dev/null
+++ b/h5py/tests/hl/test_dataset_getitem.py
@@ -0,0 +1,405 @@
+# This file is part of h5py, a Python interface to the HDF5 library.
+#
+# http://www.h5py.org
+#
+# Copyright 2008-2013 Andrew Collette and contributors
+#
+# License: Standard 3-clause BSD; see "license.txt" for full license terms
+# and contributor agreement.
+
+"""
+ Tests the h5py.Dataset.__getitem__ method.
+
+ This module does not specifically test type conversion. The "type" axis
+ therefore only tests objects which interact with the slicing system in
+ unreliable ways; for example, compound and array types.
+
+ See test_dataset_getitem_types for type-conversion tests.
+
+ Tests are organized into TestCases by dataset shape and type. Test
+ methods vary by slicing arg type.
+
+ 1. Dataset shape:
+ Empty
+ Scalar
+ 1D
+ 3D
+
+ 2. Type:
+ Float
+ Compound
+ Array
+
+ 3. Slicing arg types:
+ Ellipsis
+ Empty tuple
+ Regular slice
+ Indexing
+ Index list
+ Boolean mask
+ Field names
+"""
+
+import numpy as np
+import h5py
+
+from ..common import ut, TestCase
+
+
+class TestEmpty(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ sid = h5py.h5s.create(h5py.h5s.NULL)
+ tid = h5py.h5t.C_S1.copy()
+ tid.set_size(10)
+ dsid = h5py.h5d.create(self.f.id, b'x', tid, sid)
+ self.dset = h5py.Dataset(dsid)
+
+ def test_ellipsis(self):
+ """ Ellipsis -> IOError """
+ with self.assertRaises(IOError):
+ out = self.dset[...]
+
+ def test_tuple(self):
+ """ () -> IOError """
+ with self.assertRaises(IOError):
+ out = self.dset[()]
+
+ def test_slice(self):
+ """ slice -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0:4]
+
+ def test_index(self):
+ """ index -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0]
+
+ def test_indexlist(self):
+ """ index list -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[[1,2,5]]
+
+ def test_mask(self):
+ """ mask -> ValueError """
+ mask = np.array(True, dtype='bool')
+ with self.assertRaises(ValueError):
+ self.dset[mask]
+
+ def test_fieldnames(self):
+ """ field name -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset['field']
+
+
+class TestScalarFloat(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.data = np.array(42.5, dtype='f')
+ self.dset = self.f.create_dataset('x', data=self.data)
+
+ def test_ellipsis(self):
+ """ Ellipsis -> scalar ndarray """
+ out = self.dset[...]
+ self.assertArrayEqual(out, self.data)
+
+ def test_tuple(self):
+ """ () -> bare item """
+ out = self.dset[()]
+ self.assertArrayEqual(out, self.data.item())
+
+ def test_slice(self):
+ """ slice -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0:4]
+
+ def test_index(self):
+ """ index -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0]
+
+ # FIXME: NumPy has IndexError instead
+ def test_indexlist(self):
+ """ index list -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[[1,2,5]]
+
+ # FIXME: NumPy permits this
+ def test_mask(self):
+ """ mask -> ValueError """
+ mask = np.array(True, dtype='bool')
+ with self.assertRaises(ValueError):
+ self.dset[mask]
+
+ def test_fieldnames(self):
+ """ field name -> ValueError (no fields) """
+ with self.assertRaises(ValueError):
+ self.dset['field']
+
+
+class TestScalarCompound(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.data = np.array((42.5, -118, "Hello"), dtype=[('a', 'f'), ('b', 'i'), ('c', '|S10')])
+ self.dset = self.f.create_dataset('x', data=self.data)
+
+ def test_ellipsis(self):
+ """ Ellipsis -> scalar ndarray """
+ out = self.dset[...]
+ # assertArrayEqual doesn't work with compounds; do manually
+ self.assertIsInstance(out, np.ndarray)
+ self.assertEqual(out.shape, self.data.shape)
+ self.assertEqual(out.dtype, self.data.dtype)
+
+ def test_tuple(self):
+ """ () -> np.void instance """
+ out = self.dset[()]
+ self.assertIsInstance(out, np.void)
+ self.assertEqual(out.dtype, self.data.dtype)
+
+ def test_slice(self):
+ """ slice -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0:4]
+
+ def test_index(self):
+ """ index -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0]
+
+ # FIXME: NumPy has IndexError instead
+ def test_indexlist(self):
+ """ index list -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[[1,2,5]]
+
+ # FIXME: NumPy permits this
+ def test_mask(self):
+ """ mask -> ValueError """
+ mask = np.array(True, dtype='bool')
+ with self.assertRaises(ValueError):
+ self.dset[mask]
+
+ # FIXME: NumPy returns a scalar ndarray
+ def test_fieldnames(self):
+ """ field name -> bare value """
+ out = self.dset['a']
+ self.assertIsInstance(out, np.float32)
+ self.assertEqual(out, self.dset['a'])
+
+
+class TestScalarArray(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.dt = np.dtype('(3,2)f')
+ self.data = np.array([(3.2, -119), (42, 99.8), (3.14, 0)], dtype='f')
+ self.dset = self.f.create_dataset('x', (), dtype=self.dt)
+ self.dset[...] = self.data
+
+ def test_ellipsis(self):
+ """ Ellipsis -> ndarray promoted to underlying shape """
+ out = self.dset[...]
+ self.assertArrayEqual(out, self.data)
+
+ def test_tuple(self):
+ """ () -> same as ellipsis """
+ out = self.dset[...]
+ self.assertArrayEqual(out, self.data)
+
+ def test_slice(self):
+ """ slice -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0:4]
+
+ def test_index(self):
+ """ index -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[0]
+
+ def test_indexlist(self):
+ """ index list -> ValueError """
+ with self.assertRaises(ValueError):
+ self.dset[[]]
+
+ def test_mask(self):
+ """ mask -> ValueError """
+ mask = np.array(True, dtype='bool')
+ with self.assertRaises(ValueError):
+ self.dset[mask]
+
+ def test_fieldnames(self):
+ """ field name -> ValueError (no fields) """
+ with self.assertRaises(ValueError):
+ self.dset['field']
+
+
+ at ut.skipUnless(h5py.version.hdf5_version_tuple >= (1, 8, 7), 'HDF5 1.8.7+ required')
+class Test1DZeroFloat(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.data = np.ones((0,), dtype='f')
+ self.dset = self.f.create_dataset('x', data=self.data)
+
+ def test_ellipsis(self):
+ """ Ellipsis -> ndarray of matching shape """
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[...])
+
+ def test_tuple(self):
+ """ () -> same as ellipsis """
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[()])
+
+ def test_slice(self):
+ """ slice -> ndarray of shape (0,) """
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[0:4])
+
+ # FIXME: NumPy raises IndexError
+ def test_index(self):
+ """ index -> out of range """
+ with self.assertRaises(ValueError):
+ self.dset[0]
+
+ # FIXME: Under NumPy this works and returns a shape-(0,) array
+ # Also, at the moment it rasies UnboundLocalError (!)
+ @ut.expectedFailure
+ def test_indexlist(self):
+ """ index list """
+ with self.assertRaises(ValueError):
+ self.dset[[]]
+
+ def test_mask(self):
+ """ mask -> ndarray of matching shape """
+ mask = np.ones((0,), dtype='bool')
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[mask])
+
+ def test_fieldnames(self):
+ """ field name -> ValueError (no fields) """
+ with self.assertRaises(ValueError):
+ self.dset['field']
+
+
+class Test1DFloat(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.data = np.arange(13).astype('f')
+ self.dset = self.f.create_dataset('x', data=self.data)
+
+ def test_ellipsis(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[...])
+
+ def test_tuple(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[()])
+
+ def test_slice_simple(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[0:4])
+
+ def test_slice_zerosize(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[4:4])
+
+ def test_slice_strides(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[1:7:3])
+
+ def test_slice_negindexes(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[-8:-2:3])
+
+ def test_slice_outofrange(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[100:400:3])
+
+ def test_slice_backwards(self):
+ """ we disallow negative steps """
+ with self.assertRaises(ValueError):
+ self.dset[::-1]
+
+ def test_slice_zerostride(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[::0])
+
+ def test_index_simple(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[3])
+
+ def test_index_neg(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[-4])
+
+ # FIXME: NumPy permits this... it adds a new axis in front
+ def test_index_none(self):
+ with self.assertRaises(TypeError):
+ self.dset[None]
+
+ # FIXME: NumPy raises IndexError
+ # Also this currently raises UnboundLocalError. :(
+ @ut.expectedFailure
+ def test_index_illegal(self):
+ """ Illegal slicing argument """
+ with self.assertRaises(TypeError):
+ self.dset[{}]
+
+ # FIXME: NumPy raises IndexError
+ def test_index_outofrange(self):
+ with self.assertRaises(ValueError):
+ self.dset[100]
+
+ def test_indexlist_simple(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[[1,2,5]])
+
+ # Another UnboundLocalError
+ @ut.expectedFailure
+ def test_indexlist_empty(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[[]])
+
+ # FIXME: NumPy has IndexError
+ def test_indexlist_outofrange(self):
+ with self.assertRaises(ValueError):
+ self.dset[[100]]
+
+ def test_indexlist_nonmonotonic(self):
+ """ we require index list values to be strictly increasing """
+ with self.assertRaises(TypeError):
+ self.dset[[1,3,2]]
+
+ # This results in IOError as the argument is not properly validated.
+ # Suggest IndexError be raised.
+ @ut.expectedFailure
+ def test_indexlist_repeated(self):
+ """ we forbid repeated index values """
+ with self.assertRaises(TypeError):
+ self.dset[[1,1,2]]
+
+ def test_mask_true(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[self.data > -100])
+
+ def test_mask_false(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[self.data > 100])
+
+ def test_mask_partial(self):
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[self.data > 5])
+
+ def test_mask_wrongsize(self):
+ """ we require the boolean mask shape to match exactly """
+ with self.assertRaises(TypeError):
+ self.dset[np.ones((2,), dtype='bool')]
+
+ def test_fieldnames(self):
+ """ field name -> ValueError (no fields) """
+ with self.assertRaises(ValueError):
+ self.dset['field']
+
+
+ at ut.skipUnless(h5py.version.hdf5_version_tuple >= (1, 8, 7), 'HDF5 1.8.7+ required')
+class Test2DZeroFloat(TestCase):
+
+ def setUp(self):
+ TestCase.setUp(self)
+ self.data = np.ones((0,3), dtype='f')
+ self.dset = self.f.create_dataset('x', data=self.data)
+
+ @ut.expectedFailure
+ def test_indexlist(self):
+ """ see issue #473 """
+ self.assertNumpyBehavior(self.dset, self.data, np.s_[:,[0,1,2]])
+
+
+
\ No newline at end of file
diff --git a/h5py/tests/hl/test_dims_dimensionproxy.py b/h5py/tests/hl/test_dims_dimensionproxy.py
new file mode 100644
index 0000000..ed3d283
--- /dev/null
+++ b/h5py/tests/hl/test_dims_dimensionproxy.py
@@ -0,0 +1,24 @@
+# This file is part of h5py, a Python interface to the HDF5 library.
+#
+# http://www.h5py.org
+#
+# Copyright 2008-2013 Andrew Collette and contributors
+#
+# License: Standard 3-clause BSD; see "license.txt" for full license terms
+# and contributor agreement.
+
+"""
+ Tests the h5py.Dataset.dims.DimensionProxy class.
+"""
+
+import numpy as np
+import h5py
+
+from ..common import ut, TestCase
+
+class TestItems(TestCase):
+
+ def test_empty(self):
+ """ no dimension scales -> empty list """
+ dset = self.f.create_dataset('x', (10,))
+ self.assertEqual(dset.dims[0].items(), [])
\ No newline at end of file
diff --git a/h5py/tests/hl/test_file.py b/h5py/tests/hl/test_file.py
new file mode 100644
index 0000000..01610a4
--- /dev/null
+++ b/h5py/tests/hl/test_file.py
@@ -0,0 +1,67 @@
+# This file is part of h5py, a Python interface to the HDF5 library.
+#
+# http://www.h5py.org
+#
+# Copyright 2008-2013 Andrew Collette and contributors
+#
+# License: Standard 3-clause BSD; see "license.txt" for full license terms
+# and contributor agreement.
+
+"""
+ Tests the h5py.File object.
+"""
+
+import h5py
+
+from ..common import ut, TestCase
+
+
+def nfiles():
+ return h5py.h5f.get_obj_count(h5py.h5f.OBJ_ALL, h5py.h5f.OBJ_FILE)
+
+def ngroups():
+ return h5py.h5f.get_obj_count(h5py.h5f.OBJ_ALL, h5py.h5f.OBJ_GROUP)
+
+
+class TestDealloc(TestCase):
+
+ """
+ Behavior on object dellocation. Note most of this behavior is
+ delegated to FileID.
+ """
+
+ def test_autoclose(self):
+ """ File objects close automatically when out of scope, but
+ other objects remain open. """
+
+ start_nfiles = nfiles()
+ start_ngroups = ngroups()
+
+ fname = self.mktemp()
+ f = h5py.File(fname, 'w')
+ g = f['/']
+
+ self.assertEqual(nfiles(), start_nfiles+1)
+ self.assertEqual(ngroups(), start_ngroups+1)
+
+ del f
+
+ self.assertTrue(g)
+ self.assertEqual(nfiles(), start_nfiles)
+ self.assertEqual(ngroups(), start_ngroups+1)
+
+ f = g.file
+
+ self.assertTrue(f)
+ self.assertEqual(nfiles(), start_nfiles+1)
+ self.assertEqual(ngroups(), start_ngroups+1)
+
+ del g
+
+ self.assertEqual(nfiles(), start_nfiles+1)
+ self.assertEqual(ngroups(), start_ngroups)
+
+ del f
+
+ self.assertEqual(nfiles(), start_nfiles)
+ self.assertEqual(ngroups(), start_ngroups)
\ No newline at end of file
diff --git a/h5py/tests/old/__init__.py b/h5py/tests/old/__init__.py
new file mode 100644
index 0000000..5062aea
--- /dev/null
+++ b/h5py/tests/old/__init__.py
@@ -0,0 +1,31 @@
+from . import ( test_attrs,
+ test_attrs_data,
+ test_base,
+ test_dataset,
+ test_datatype,
+ test_dimension_scales,
+ test_file,
+ test_group,
+ test_h5,
+ test_h5f,
+ test_h5p,
+ test_h5t,
+ test_objects,
+ test_selections,
+ test_slicing )
+
+MODULES = ( test_attrs,
+ test_attrs_data,
+ test_base,
+ test_dataset,
+ test_datatype,
+ test_dimension_scales,
+ test_file,
+ test_group,
+ test_h5,
+ test_h5f,
+ test_h5p,
+ test_h5t,
+ test_objects,
+ test_selections,
+ test_slicing )
\ No newline at end of file
diff --git a/h5py/_hl/tests/common.py b/h5py/tests/old/common.py
similarity index 100%
rename from h5py/_hl/tests/common.py
rename to h5py/tests/old/common.py
diff --git a/h5py/_hl/tests/test_attrs.py b/h5py/tests/old/test_attrs.py
similarity index 94%
rename from h5py/_hl/tests/test_attrs.py
rename to h5py/tests/old/test_attrs.py
index 3a974a7..dae9b66 100644
--- a/h5py/_hl/tests/test_attrs.py
+++ b/h5py/tests/old/test_attrs.py
@@ -21,7 +21,7 @@ import collections
from common import TestCase, ut
from h5py.highlevel import File
-from h5py import h5a
+from h5py import h5a, h5t
from h5py.highlevel import AttributeManager
@@ -154,3 +154,10 @@ class TestMutableMapping(BaseAttrs):
AttributeManager.__delitem__
AttributeManager.__iter__
AttributeManager.__len__
+
+class TestVlen(BaseAttrs):
+ def test_vlen(self):
+ a = np.array([np.arange(3), np.arange(4)],
+ dtype=h5t.special_dtype(vlen=int))
+ self.f.attrs['a'] = a
+ self.assertArrayEqual(self.f.attrs['a'][0], a[0])
diff --git a/h5py/_hl/tests/test_attrs_data.py b/h5py/tests/old/test_attrs_data.py
similarity index 100%
rename from h5py/_hl/tests/test_attrs_data.py
rename to h5py/tests/old/test_attrs_data.py
diff --git a/h5py/_hl/tests/test_base.py b/h5py/tests/old/test_base.py
similarity index 100%
rename from h5py/_hl/tests/test_base.py
rename to h5py/tests/old/test_base.py
diff --git a/h5py/_hl/tests/test_dataset.py b/h5py/tests/old/test_dataset.py
similarity index 73%
rename from h5py/_hl/tests/test_dataset.py
rename to h5py/tests/old/test_dataset.py
index aa834e2..24feec0 100644
--- a/h5py/_hl/tests/test_dataset.py
+++ b/h5py/tests/old/test_dataset.py
@@ -25,8 +25,8 @@ from h5py.highlevel import File, Group, Dataset
from h5py import h5t
import h5py
-class BaseDataset(TestCase):
+class BaseDataset(TestCase):
def setUp(self):
self.f = File(self.mktemp(), 'w')
@@ -34,8 +34,8 @@ class BaseDataset(TestCase):
if self.f:
self.f.close()
-class TestRepr(BaseDataset):
+class TestRepr(BaseDataset):
"""
Feature: repr(Dataset) behaves sensibly
"""
@@ -47,6 +47,7 @@ class TestRepr(BaseDataset):
self.f.close()
self.assertIsInstance(repr(ds), basestring)
+
class TestCreateShape(BaseDataset):
"""
@@ -82,6 +83,7 @@ class TestCreateShape(BaseDataset):
with self.assertRaises(TypeError):
self.f.create_dataset('foo')
+
class TestCreateData(BaseDataset):
"""
@@ -109,17 +111,21 @@ class TestCreateData(BaseDataset):
def test_reshape(self):
""" Create from existing data, and make it fit a new shape """
data = np.arange(30, dtype='f')
- dset = self.f.create_dataset('foo', shape=(10,3), data=data)
- self.assertEqual(dset.shape, (10,3))
- self.assertArrayEqual(dset[...],data.reshape((10,3)))
+ dset = self.f.create_dataset('foo', shape=(10, 3), data=data)
+ self.assertEqual(dset.shape, (10, 3))
+ self.assertArrayEqual(dset[...], data.reshape((10, 3)))
def test_appropriate_low_level_id(self):
" Binding Dataset to a non-DatasetID identifier fails with ValueError "
with self.assertRaises(ValueError):
Dataset(self.f['/'].id)
+ @ut.expectedFailure
def test_create_bytestring(self):
""" Creating dataset with byte string yields vlen ASCII dataset """
+ # there was no test here!
+ self.assertEqual(True, False)
+
class TestCreateRequire(BaseDataset):
@@ -129,43 +135,44 @@ class TestCreateRequire(BaseDataset):
def test_create(self):
""" Create new dataset with no conflicts """
- dset = self.f.require_dataset('foo', (10,3), 'f')
+ dset = self.f.require_dataset('foo', (10, 3), 'f')
self.assertIsInstance(dset, Dataset)
- self.assertEqual(dset.shape, (10,3))
+ self.assertEqual(dset.shape, (10, 3))
def test_create_existing(self):
""" require_dataset yields existing dataset """
- dset = self.f.require_dataset('foo', (10,3), 'f')
- dset2 = self.f.require_dataset('foo',(10,3), 'f')
+ dset = self.f.require_dataset('foo', (10, 3), 'f')
+ dset2 = self.f.require_dataset('foo', (10, 3), 'f')
self.assertEqual(dset, dset2)
def test_shape_conflict(self):
""" require_dataset with shape conflict yields TypeError """
- self.f.create_dataset('foo', (10,3), 'f')
+ self.f.create_dataset('foo', (10, 3), 'f')
with self.assertRaises(TypeError):
- self.f.require_dataset('foo', (10,4), 'f')
+ self.f.require_dataset('foo', (10, 4), 'f')
def test_type_confict(self):
""" require_dataset with object type conflict yields TypeError """
self.f.create_group('foo')
with self.assertRaises(TypeError):
- self.f.require_dataset('foo', (10,3), 'f')
+ self.f.require_dataset('foo', (10, 3), 'f')
def test_dtype_conflict(self):
""" require_dataset with dtype conflict (strict mode) yields TypeError
"""
- dset = self.f.create_dataset('foo', (10,3), 'f')
+ dset = self.f.create_dataset('foo', (10, 3), 'f')
with self.assertRaises(TypeError):
- self.f.require_dataset('foo', (10,3), 'S10')
+ self.f.require_dataset('foo', (10, 3), 'S10')
def test_dtype_close(self):
""" require_dataset with convertible type succeeds (non-strict mode)
"""
- dset = self.f.create_dataset('foo', (10,3), 'i4')
- dset2 = self.f.require_dataset('foo', (10,3), 'i2', exact=False)
+ dset = self.f.create_dataset('foo', (10, 3), 'i4')
+ dset2 = self.f.require_dataset('foo', (10, 3), 'i2', exact=False)
self.assertEqual(dset, dset2)
self.assertEqual(dset2.dtype, np.dtype('i4'))
+
class TestCreateChunked(BaseDataset):
"""
@@ -189,7 +196,7 @@ class TestCreateChunked(BaseDataset):
def test_auto_chunks(self):
""" Auto-chunking of datasets """
- dset = self.f.create_dataset('foo', shape=(20,100), chunks=True)
+ dset = self.f.create_dataset('foo', shape=(20, 100), chunks=True)
self.assertIsInstance(dset.chunks, tuple)
self.assertEqual(len(dset.chunks), 2)
@@ -198,6 +205,7 @@ class TestCreateChunked(BaseDataset):
dset = self.f.create_dataset('foo', shape=(3,), dtype='S100000000', chunks=True)
self.assertEqual(dset.chunks, (1,))
+
class TestCreateFillvalue(BaseDataset):
"""
@@ -223,7 +231,7 @@ class TestCreateFillvalue(BaseDataset):
def test_compound(self):
""" Fill value works with compound types """
- dt = np.dtype([('a','f4'),('b','i8')])
+ dt = np.dtype([('a', 'f4'), ('b', 'i8')])
v = np.ones((1,), dtype=dt)[0]
dset = self.f.create_dataset('foo', (10,), dtype=dt, fillvalue=v)
self.assertEqual(dset.fillvalue, v)
@@ -233,7 +241,8 @@ class TestCreateFillvalue(BaseDataset):
""" Bogus fill value raises TypeError """
with self.assertRaises(ValueError):
dset = self.f.create_dataset('foo', (10,),
- dtype=[('a','i'),('b','f')], fillvalue=42)
+ dtype=[('a', 'i'), ('b', 'f')], fillvalue=42)
+
class TestCreateNamedType(BaseDataset):
@@ -249,6 +258,7 @@ class TestCreateNamedType(BaseDataset):
self.assertEqual(dset.id.get_type(), self.f['type'].id)
self.assertTrue(dset.id.get_type().committed())
+
@ut.skipIf('gzip' not in h5py.filters.encode, "DEFLATE is not installed")
class TestCreateGzip(BaseDataset):
@@ -258,34 +268,82 @@ class TestCreateGzip(BaseDataset):
def test_gzip(self):
""" Create with explicit gzip options """
- dset = self.f.create_dataset('foo', (20,30), compression='gzip',
+ dset = self.f.create_dataset('foo', (20, 30), compression='gzip',
compression_opts=9)
self.assertEqual(dset.compression, 'gzip')
self.assertEqual(dset.compression_opts, 9)
def test_gzip_implicit(self):
""" Create with implicit gzip level (level 4) """
- dset = self.f.create_dataset('foo', (20,30), compression='gzip')
+ dset = self.f.create_dataset('foo', (20, 30), compression='gzip')
self.assertEqual(dset.compression, 'gzip')
self.assertEqual(dset.compression_opts, 4)
def test_gzip_number(self):
""" Create with gzip level by specifying integer """
- dset = self.f.create_dataset('foo', (20,30), compression=7)
+ dset = self.f.create_dataset('foo', (20, 30), compression=7)
self.assertEqual(dset.compression, 'gzip')
self.assertEqual(dset.compression_opts, 7)
+ original_compression_vals = h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS
+ try:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = tuple()
+ with self.assertRaises(ValueError):
+ dset = self.f.create_dataset('foo', (20, 30), compression=7)
+ finally:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = original_compression_vals
+
def test_gzip_exc(self):
""" Illegal gzip level (explicit or implicit) raises ValueError """
+ with self.assertRaises((ValueError, RuntimeError)):
+ self.f.create_dataset('foo', (20, 30), compression=14)
with self.assertRaises(ValueError):
- self.f.create_dataset('foo', (20,30), compression=14)
+ self.f.create_dataset('foo', (20, 30), compression=-4)
with self.assertRaises(ValueError):
- self.f.create_dataset('foo', (20,30), compression=-4)
- with self.assertRaises(ValueError):
- self.f.create_dataset('foo', (20,30), compression='gzip',
+ self.f.create_dataset('foo', (20, 30), compression='gzip',
compression_opts=14)
+ at ut.skipIf('gzip' not in h5py.filters.encode, "DEFLATE is not installed")
+class TestCreateCompressionNumber(BaseDataset):
+
+ """
+ Feature: Datasets created with a compression code
+ """
+
+ def test_compression_number(self):
+ """ Create with compression number of gzip (h5py.h5z.FILTER_DEFLATE) and a compression level of 7"""
+ original_compression_vals = h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS
+ try:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = tuple()
+ dset = self.f.create_dataset('foo', (20, 30), compression=h5py.h5z.FILTER_DEFLATE, compression_opts=(7,))
+ finally:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = original_compression_vals
+
+ self.assertEqual(dset.compression, 'gzip')
+ self.assertEqual(dset.compression_opts, 7)
+
+ def test_compression_number_invalid(self):
+ """ Create with invalid compression numbers """
+ with self.assertRaises(ValueError) as e:
+ self.f.create_dataset('foo', (20, 30), compression=-999)
+ self.assertIn("Invalid filter", str(e.exception))
+
+ with self.assertRaises(ValueError) as e:
+ self.f.create_dataset('foo', (20, 30), compression=100)
+ self.assertIn("Unknown compression", str(e.exception))
+
+ original_compression_vals = h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS
+ try:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = tuple()
+
+ # Using gzip compression requires a compression level specified in compression_opts
+ with self.assertRaises(IndexError):
+ self.f.create_dataset('foo', (20, 30), compression=h5py.h5z.FILTER_DEFLATE)
+ finally:
+ h5py._hl.dataset._LEGACY_GZIP_COMPRESSION_VALS = original_compression_vals
+
+
@ut.skipIf('lzf' not in h5py.filters.encode, "LZF is not installed")
class TestCreateLZF(BaseDataset):
@@ -295,14 +353,14 @@ class TestCreateLZF(BaseDataset):
def test_lzf(self):
""" Create with explicit lzf """
- dset = self.f.create_dataset('foo', (20,30), compression='lzf')
+ dset = self.f.create_dataset('foo', (20, 30), compression='lzf')
self.assertEqual(dset.compression, 'lzf')
self.assertEqual(dset.compression_opts, None)
def test_lzf_exc(self):
""" Giving lzf options raises ValueError """
with self.assertRaises(ValueError):
- self.f.create_dataset('foo', (20,30), compression='lzf',
+ self.f.create_dataset('foo', (20, 30), compression='lzf',
compression_opts=4)
@@ -315,8 +373,8 @@ class TestCreateSZIP(BaseDataset):
def test_szip(self):
""" Create with explicit szip """
- dset = self.f.create_dataset('foo', (20,30), compression='szip',
- compression_opts=('ec',16))
+ dset = self.f.create_dataset('foo', (20, 30), compression='szip',
+ compression_opts=('ec', 16))
@ut.skipIf('shuffle' not in h5py.filters.encode, "SHUFFLE is not installed")
@@ -328,7 +386,7 @@ class TestCreateShuffle(BaseDataset):
def test_shuffle(self):
""" Enable shuffle filter """
- dset = self.f.create_dataset('foo', (20,30), shuffle=True)
+ dset = self.f.create_dataset('foo', (20, 30), shuffle=True)
self.assertTrue(dset.shuffle)
@@ -340,9 +398,10 @@ class TestCreateFletcher32(BaseDataset):
def test_fletcher32(self):
""" Enable fletcher32 filter """
- dset = self.f.create_dataset('foo', (20,30), fletcher32=True)
+ dset = self.f.create_dataset('foo', (20, 30), fletcher32=True)
self.assertTrue(dset.fletcher32)
+
@ut.skipIf('scaleoffset' not in h5py.filters.encode, "SCALEOFFSET is not installed")
class TestCreateScaleOffset(BaseDataset):
"""
@@ -353,14 +412,14 @@ class TestCreateScaleOffset(BaseDataset):
""" Ensure that a scale factor is required for scaleoffset compression of floating point data """
with self.assertRaises(ValueError):
- dset = self.f.create_dataset('foo', (20,30), dtype=float, scaleoffset=True)
+ dset = self.f.create_dataset('foo', (20, 30), dtype=float, scaleoffset=True)
def test_float(self):
""" Scaleoffset filter works for floating point data """
scalefac = 4
- shape=(100,300)
- range=20*10**scalefac
+ shape = (100, 300)
+ range = 20*10**scalefac
testdata = (np.random.rand(*shape)-0.5)*range
dset = self.f.create_dataset('foo', shape, dtype=float, scaleoffset=scalefac)
@@ -385,8 +444,8 @@ class TestCreateScaleOffset(BaseDataset):
""" Scaleoffset filter works for integer data with default precision """
nbits = 12
- shape = (100, 300)
- testdata = np.random.randint(0, 2**nbits-1,size=shape)
+ shape = (100, 300)
+ testdata = np.random.randint(0, 2**nbits-1, size=shape)
# Create dataset; note omission of nbits (for library-determined precision)
dset = self.f.create_dataset('foo', shape, dtype=int, scaleoffset=True)
@@ -406,8 +465,8 @@ class TestCreateScaleOffset(BaseDataset):
""" Scaleoffset filter works for integer data with specified precision """
nbits = 12
- shape = (100, 300)
- testdata = np.random.randint(0, 2**nbits,size=shape)
+ shape = (100, 300)
+ testdata = np.random.randint(0, 2**nbits, size=shape)
dset = self.f.create_dataset('foo', shape, dtype=int, scaleoffset=nbits)
@@ -426,8 +485,8 @@ class TestCreateScaleOffset(BaseDataset):
""" Scaleoffset filter works for integer data with specified precision """
nbits = 12
- shape = (100, 300)
- testdata = np.random.randint(0, 2**(nbits+1)-1,size=shape)
+ shape = (100, 300)
+ testdata = np.random.randint(0, 2**(nbits+1)-1, size=shape)
dset = self.f.create_dataset('foo', shape, dtype=int, scaleoffset=nbits)
@@ -444,6 +503,7 @@ class TestCreateScaleOffset(BaseDataset):
# Compression is lossy
assert not (readdata == testdata).all()
+
class TestAutoCreate(BaseDataset):
"""
@@ -478,6 +538,7 @@ class TestAutoCreate(BaseDataset):
self.assertEqual(tid.get_size(), 11)
self.assertEqual(tid.get_cset(), h5py.h5t.CSET_ASCII)
+
class TestResize(BaseDataset):
"""
@@ -486,48 +547,49 @@ class TestResize(BaseDataset):
def test_create(self):
""" Create dataset with "maxshape" """
- dset = self.f.create_dataset('foo', (20,30), maxshape=(20,60))
+ dset = self.f.create_dataset('foo', (20, 30), maxshape=(20, 60))
self.assertIsNot(dset.chunks, None)
- self.assertEqual(dset.maxshape, (20,60))
+ self.assertEqual(dset.maxshape, (20, 60))
def test_resize(self):
""" Datasets may be resized up to maxshape """
- dset = self.f.create_dataset('foo', (20,30), maxshape=(20,60))
- self.assertEqual(dset.shape, (20,30))
- dset.resize((20,50))
- self.assertEqual(dset.shape, (20,50))
- dset.resize((20,60))
- self.assertEqual(dset.shape, (20,60))
+ dset = self.f.create_dataset('foo', (20, 30), maxshape=(20, 60))
+ self.assertEqual(dset.shape, (20, 30))
+ dset.resize((20, 50))
+ self.assertEqual(dset.shape, (20, 50))
+ dset.resize((20, 60))
+ self.assertEqual(dset.shape, (20, 60))
def test_resize_over(self):
""" Resizing past maxshape triggers ValueError """
- dset = self.f.create_dataset('foo', (20,30), maxshape=(20,60))
+ dset = self.f.create_dataset('foo', (20, 30), maxshape=(20, 60))
with self.assertRaises(ValueError):
- dset.resize((20,70))
+ dset.resize((20, 70))
def test_resize_nonchunked(self):
""" Resizing non-chunked dataset raises TypeError """
- dset = self.f.create_dataset("foo", (20,30))
+ dset = self.f.create_dataset("foo", (20, 30))
with self.assertRaises(TypeError):
- dset.resize((20,60))
+ dset.resize((20, 60))
def test_resize_axis(self):
""" Resize specified axis """
- dset = self.f.create_dataset('foo', (20,30), maxshape=(20,60))
+ dset = self.f.create_dataset('foo', (20, 30), maxshape=(20, 60))
dset.resize(50, axis=1)
- self.assertEqual(dset.shape, (20,50))
+ self.assertEqual(dset.shape, (20, 50))
def test_axis_exc(self):
""" Illegal axis raises ValueError """
- dset = self.f.create_dataset('foo', (20,30), maxshape=(20,60))
+ dset = self.f.create_dataset('foo', (20, 30), maxshape=(20, 60))
with self.assertRaises(ValueError):
dset.resize(50, axis=2)
def test_zero_dim(self):
""" Allow zero-length initial dims for unlimited axes (issue 111) """
- dset = self.f.create_dataset('foo', (15,0), maxshape=(15,None))
- self.assertEqual(dset.shape, (15,0))
- self.assertEqual(dset.maxshape, (15,None))
+ dset = self.f.create_dataset('foo', (15, 0), maxshape=(15, None))
+ self.assertEqual(dset.shape, (15, 0))
+ self.assertEqual(dset.maxshape, (15, None))
+
class TestDtype(BaseDataset):
@@ -549,12 +611,12 @@ class TestLen(BaseDataset):
def test_len(self):
""" Python len() (under 32 bits) """
- dset = self.f.create_dataset('foo', (312,15))
+ dset = self.f.create_dataset('foo', (312, 15))
self.assertEqual(len(dset), 312)
def test_len_big(self):
""" Python len() vs Dataset.len() """
- dset = self.f.create_dataset('foo', (2**33,15))
+ dset = self.f.create_dataset('foo', (2**33, 15))
self.assertEqual(dset.shape, (2**33, 15))
if sys.maxsize == 2**31-1:
with self.assertRaises(OverflowError):
@@ -563,6 +625,7 @@ class TestLen(BaseDataset):
self.assertEqual(len(dset), 2**33)
self.assertEqual(dset.len(), 2**33)
+
class TestIter(BaseDataset):
"""
@@ -571,11 +634,11 @@ class TestIter(BaseDataset):
def test_iter(self):
""" Iterating over a dataset yields rows """
- data = np.arange(30, dtype='f').reshape((10,3))
+ data = np.arange(30, dtype='f').reshape((10, 3))
dset = self.f.create_dataset('foo', data=data)
for x, y in zip(dset, data):
self.assertEqual(len(x), 3)
- self.assertArrayEqual(x,y)
+ self.assertArrayEqual(x, y)
def test_iter_scalar(self):
""" Iterating over scalar dataset raises TypeError """
@@ -583,6 +646,7 @@ class TestIter(BaseDataset):
with self.assertRaises(TypeError):
[x for x in dset]
+
class TestStrings(BaseDataset):
"""
@@ -614,7 +678,7 @@ class TestStrings(BaseDataset):
tid = ds.id.get_type()
self.assertEqual(type(tid), h5py.h5t.TypeStringID)
self.assertFalse(tid.is_variable_str())
- self.assertEqual(tid.get_size(),10)
+ self.assertEqual(tid.get_size(), 10)
self.assertEqual(tid.get_cset(), h5py.h5t.CSET_ASCII)
def test_fixed_unicode(self):
@@ -677,6 +741,7 @@ class TestStrings(BaseDataset):
self.assertEqual(type(out), unicode)
self.assertEqual(out, data)
+
class TestCompound(BaseDataset):
"""
@@ -694,7 +759,7 @@ class TestCompound(BaseDataset):
('status', np.uint8),
('endpoint_type', np.uint8), ] )
- testdata = np.ndarray((16,),dtype=dt)
+ testdata = np.ndarray((16,), dtype=dt)
for key in dt.fields:
testdata[key] = np.random.random((16,))*100
@@ -703,6 +768,7 @@ class TestCompound(BaseDataset):
self.assertTrue(np.all(outdata == testdata))
self.assertEqual(outdata.dtype, testdata.dtype)
+
class TestEnum(BaseDataset):
"""
@@ -714,19 +780,20 @@ class TestEnum(BaseDataset):
def test_create(self):
""" Enum datasets can be created and type correctly round-trips """
dt = h5py.special_dtype(enum=('i', self.EDICT))
- ds = self.f.create_dataset('x', (100,100), dtype=dt)
+ ds = self.f.create_dataset('x', (100, 100), dtype=dt)
dt2 = ds.dtype
dict2 = h5py.check_dtype(enum=dt2)
- self.assertEqual(dict2,self.EDICT)
+ self.assertEqual(dict2, self.EDICT)
def test_readwrite(self):
""" Enum datasets can be read/written as integers """
dt = h5py.special_dtype(enum=('i4', self.EDICT))
- ds = self.f.create_dataset('x', (100,100), dtype=dt)
- ds[35,37] = 42
- ds[1,:] = 1
- self.assertEqual(ds[35,37], 42)
- self.assertArrayEqual(ds[1,:], np.array((1,)*100,dtype='i4'))
+ ds = self.f.create_dataset('x', (100, 100), dtype=dt)
+ ds[35, 37] = 42
+ ds[1, :] = 1
+ self.assertEqual(ds[35, 37], 42)
+ self.assertArrayEqual(ds[1, :], np.array((1,)*100, dtype='i4'))
+
class TestFloats(BaseDataset):
@@ -741,7 +808,7 @@ class TestFloats(BaseDataset):
dset[...] = data
self.assertArrayEqual(dset[...], data)
- @ut.skipUnless(hasattr(np, 'float16'), "NumPy float16 support required")
+ @ut.skipUnless(hasattr(np, 'float16'), "NumPy float16 support required")
def test_mini(self):
""" Mini-floats round trip """
self._exectest(np.dtype('float16'))
@@ -754,6 +821,7 @@ class TestFloats(BaseDataset):
else:
self.assertEqual(h5t.IEEE_F16LE.dtype, np.dtype('<f4'))
+
class TestTrackTimes(BaseDataset):
"""
@@ -766,6 +834,7 @@ class TestTrackTimes(BaseDataset):
ds_mtime = h5py.h5g.get_objinfo(ds._id).mtime
self.assertEqual(0, ds_mtime)
+
class TestZeroShape(BaseDataset):
"""
@@ -777,12 +846,12 @@ class TestZeroShape(BaseDataset):
ds = self.f.create_dataset('x', (0,), maxshape=(None,))
self.assertEqual(ds.shape, np.array(ds).shape)
- ds = self.f.create_dataset('y', (0,0), maxshape=(None,None))
+ ds = self.f.create_dataset('y', (0, 0), maxshape=(None, None))
self.assertEqual(ds.shape, np.array(ds).shape)
def test_reading(self):
""" Slicing into empty datasets works correctly """
- dt = [('a','f'),('b','i')]
+ dt = [('a', 'f'), ('b', 'i')]
ds = self.f.create_dataset('x', (0,), dtype=dt, maxshape=(None,))
arr = np.empty((0,), dtype=dt)
@@ -791,6 +860,7 @@ class TestZeroShape(BaseDataset):
self.assertEqual(ds[()].shape, arr.shape)
self.assertEqual(ds[()].dtype, arr.dtype)
+
class TestRegionRefs(BaseDataset):
"""
@@ -799,23 +869,24 @@ class TestRegionRefs(BaseDataset):
def setUp(self):
BaseDataset.setUp(self)
- self.data = np.arange(100*100).reshape((100,100))
+ self.data = np.arange(100*100).reshape((100, 100))
self.dset = self.f.create_dataset('x', data=self.data)
self.dset[...] = self.data
def test_create_ref(self):
""" Region references can be used as slicing arguments """
- slic = np.s_[25:35,10:100:5]
+ slic = np.s_[25:35, 10:100:5]
ref = self.dset.regionref[slic]
self.assertArrayEqual(self.dset[ref], self.data[slic])
def test_ref_shape(self):
""" Region reference shape and selection shape """
- slic = np.s_[25:35,10:100:5]
+ slic = np.s_[25:35, 10:100:5]
ref = self.dset.regionref[slic]
self.assertEqual(self.dset.regionref.shape(ref), self.dset.shape)
self.assertEqual(self.dset.regionref.selection(ref), (10, 18))
+
class TestAstype(BaseDataset):
"""
@@ -840,17 +911,68 @@ class TestScalarCompound(BaseDataset):
def test_scalar_compound(self):
- dt = np.dtype([('a','i')])
+ dt = np.dtype([('a', 'i')])
dset = self.f.create_dataset('x', (), dtype=dt)
self.assertEqual(dset['a'].dtype, np.dtype('i'))
-
-
-
-
-
-
-
-
-
+class TestVlen(BaseDataset):
+ def test_int(self):
+ dt = h5py.special_dtype(vlen=int)
+ ds = self.f.create_dataset('vlen', (4,), dtype=dt)
+ ds[0] = np.arange(3)
+ ds[1] = np.arange(0)
+ ds[2] = [1, 2, 3]
+ ds[3] = np.arange(1)
+ self.assertArrayEqual(ds[0], np.arange(3))
+ self.assertArrayEqual(ds[1], np.arange(0))
+ self.assertArrayEqual(ds[2], np.array([1, 2, 3]))
+ self.assertArrayEqual(ds[1], np.arange(0))
+ ds[0:2] = np.array([np.arange(5), np.arange(4)])
+ self.assertArrayEqual(ds[0], np.arange(5))
+ self.assertArrayEqual(ds[1], np.arange(4))
+ ds[0:2] = np.array([np.arange(3), np.arange(3)])
+ self.assertArrayEqual(ds[0], np.arange(3))
+ self.assertArrayEqual(ds[1], np.arange(3))
+
+ def test_convert(self):
+ dt = h5py.special_dtype(vlen=int)
+ ds = self.f.create_dataset('vlen', (3,), dtype=dt)
+ ds[0] = np.array([1.4, 1.2])
+ ds[1] = np.array([1.2])
+ ds[2] = [1.2, 2, 3]
+ self.assertArrayEqual(ds[0], np.array([1, 1]))
+ self.assertArrayEqual(ds[1], np.array([1]))
+ self.assertArrayEqual(ds[2], np.array([1, 2, 3]))
+ ds[0:2] = np.array([[0.1, 1.1, 2.1, 3.1, 4], np.arange(4)])
+ self.assertArrayEqual(ds[0], np.arange(5))
+ self.assertArrayEqual(ds[1], np.arange(4))
+ ds[0:2] = np.array([np.array([0.1, 1.2, 2.2]),
+ np.array([0.2, 1.2, 2.2])])
+ self.assertArrayEqual(ds[0], np.arange(3))
+ self.assertArrayEqual(ds[1], np.arange(3))
+
+ def test_multidim(self):
+ dt = h5py.special_dtype(vlen=int)
+ ds = self.f.create_dataset('vlen', (2, 2), dtype=dt)
+ ds[0, 0] = np.arange(1)
+ ds[:, :] = np.array([[np.arange(3), np.arange(2)],
+ [np.arange(1), np.arange(2)]])
+ ds[:, :] = np.array([[np.arange(2), np.arange(2)],
+ [np.arange(2), np.arange(2)]])
+
+
+class TestLowOpen(BaseDataset):
+
+ def test_get_access_list(self):
+ """ Test H5Dget_access_plist """
+ ds = self.f.create_dataset('foo', (4,))
+ p_list = ds.id.get_access_plist()
+
+ def test_dapl(self):
+ """ Test the dapl keyword to h5d.open """
+ dapl = h5py.h5p.create(h5py.h5p.DATASET_ACCESS)
+ dset = self.f.create_dataset('x', (100,))
+ del dset
+ dsid = h5py.h5d.open(self.f.id, b'x', dapl)
+ self.assertIsInstance(dsid, h5py.h5d.DatasetID)
diff --git a/h5py/_hl/tests/test_datatype.py b/h5py/tests/old/test_datatype.py
similarity index 100%
rename from h5py/_hl/tests/test_datatype.py
rename to h5py/tests/old/test_datatype.py
diff --git a/h5py/_hl/tests/test_dimension_scales.py b/h5py/tests/old/test_dimension_scales.py
similarity index 93%
rename from h5py/_hl/tests/test_dimension_scales.py
rename to h5py/tests/old/test_dimension_scales.py
index ce384fb..7eef162 100644
--- a/h5py/_hl/tests/test_dimension_scales.py
+++ b/h5py/tests/old/test_dimension_scales.py
@@ -159,8 +159,8 @@ class TestDimensionsHighLevel(BaseDataset):
self.f['data'].dims[2].detach_scale(self.f['x1'])
self.assertEqual(len(self.f['data'].dims[2]), 1)
self.assertEqual(self.f['data'].dims[2][0], self.f['x2'])
- self.f['data2'].dims[2].detach_scale(self.f['x1'])
- self.assertEqual(len(self.f['data2'].dims[2]), 0)
+ self.f['data'].dims[2].detach_scale(self.f['x2'])
+ self.assertEqual(len(self.f['data'].dims[2]), 0)
def test_attach_scale(self):
self.f['x3'] = self.f['x2'][...]
@@ -170,7 +170,7 @@ class TestDimensionsHighLevel(BaseDataset):
def test_get_dimension_scale(self):
self.assertEqual(self.f['data'].dims[2][0], self.f['x1'])
- with self.assertRaises(IndexError):
+ with self.assertRaises(RuntimeError):
self.f['data2'].dims[2][0], self.f['x2']
self.assertEqual(self.f['data'].dims[2][''], self.f['x1'])
self.assertEqual(self.f['data'].dims[2]['x2 name'], self.f['x2'])
@@ -195,3 +195,10 @@ class TestDimensionsHighLevel(BaseDataset):
def test_repr(self):
self.assertEqual(repr(self.f['data'].dims[2])[1:16], '"x" dimension 2')
+
+ def test_attributes(self):
+ self.f["data2"].attrs["DIMENSION_LIST"] = self.f["data"].attrs[
+ "DIMENSION_LIST"]
+ self.assertEqual(len(self.f['data2'].dims[0]), 0)
+ self.assertEqual(len(self.f['data2'].dims[1]), 1)
+ self.assertEqual(len(self.f['data2'].dims[2]), 2)
diff --git a/h5py/_hl/tests/test_file.py b/h5py/tests/old/test_file.py
similarity index 95%
rename from h5py/_hl/tests/test_file.py
rename to h5py/tests/old/test_file.py
index d0b066c..473bf46 100644
--- a/h5py/_hl/tests/test_file.py
+++ b/h5py/tests/old/test_file.py
@@ -15,7 +15,7 @@
from __future__ import with_statement
-import os
+import os, stat
from .common import ut, TestCase, unicode_filenames
from h5py.highlevel import File
@@ -29,6 +29,30 @@ class TestFileOpen(TestCase):
Feature: Opening files with Python-style modes.
"""
+ def test_default(self):
+ """ Default semantics in the presence or absence of a file """
+ fname = self.mktemp()
+
+ # No existing file; create a new file and open RW
+ with File(fname) as f:
+ self.assertTrue(f)
+ self.assertEqual(f.mode, 'r+')
+
+ # Existing readonly file; open read-only
+ os.chmod(fname, stat.S_IREAD)
+ try:
+ with File(fname) as f:
+ self.assertTrue(f)
+ self.assertEqual(f.mode, 'r')
+ finally:
+ os.chmod(fname, stat.S_IWRITE)
+
+ # File exists but is not HDF5; raise IOError
+ with open(fname, 'wb') as f:
+ f.write(b'\x00')
+ with self.assertRaises(IOError):
+ File(fname)
+
def test_create(self):
""" Mode 'w' opens file in overwrite mode """
fname = self.mktemp()
@@ -389,23 +413,6 @@ class TestFileProperty(TestCase):
finally:
hfile.close()
- def test_property_object_id(self):
- """ File property should have the same ObjectID as the original """
- fname = self.mktemp()
- hfile = File(fname, 'w')
- try:
- self.assertIs(hfile.id, hfile.file.id)
- finally:
- hfile.close()
- # otherwise, following up with this next block would yield:
- # ValueError: invalid file identifier
- # (Invalid arguments to routine: Inappropriate type)
- hfile = File(fname, 'w')
- try:
- self.assertEqual(hfile.id, hfile.file.id)
- finally:
- hfile.close()
-
def test_close(self):
""" All retrieved File objects are closed at the same time """
fname = self.mktemp()
diff --git a/h5py/_hl/tests/test_group.py b/h5py/tests/old/test_group.py
similarity index 91%
rename from h5py/_hl/tests/test_group.py
rename to h5py/tests/old/test_group.py
index a954158..25329a1 100644
--- a/h5py/_hl/tests/test_group.py
+++ b/h5py/tests/old/test_group.py
@@ -282,21 +282,79 @@ class TestLen(BaseMapping):
with self.assertRaises(ValueError):
len(self.f)
-class TestContains(BaseMapping):
+class TestContains(BaseGroup):
"""
Feature: The Python "in" builtin tests for containership
"""
def test_contains(self):
- """ "in" builtin works for containership """
- self.assertIn('a', self.f)
- self.assertNotIn('mongoose', self.f)
+ """ "in" builtin works for containership (byte and Unicode) """
+ self.f.create_group('a')
+ self.assertIn(b'a', self.f)
+ self.assertIn(u'a', self.f)
+ self.assertIn(b'/a', self.f)
+ self.assertIn(u'/a', self.f)
+ self.assertNotIn(b'mongoose', self.f)
+ self.assertNotIn(u'mongoose', self.f)
def test_exc(self):
""" "in" on closed group returns False (see also issue 174) """
+ self.f.create_group('a')
self.f.close()
- self.assertFalse('a' in self.f)
+ self.assertFalse(b'a' in self.f)
+ self.assertFalse(u'a' in self.f)
+
+ def test_empty(self):
+ """ Empty strings work properly and aren't contained """
+ self.assertNotIn(u'', self.f)
+ self.assertNotIn(b'', self.f)
+
+ def test_dot(self):
+ """ Current group "." is always contained """
+ self.assertIn(b'.', self.f)
+ self.assertIn(u'.', self.f)
+
+ def test_root(self):
+ """ Root group (by itself) is contained """
+ self.assertIn(b'/', self.f)
+ self.assertIn(u'/', self.f)
+
+ def test_trailing_slash(self):
+ """ Trailing slashes are unconditionally ignored """
+ self.f.create_group('group')
+ self.f['dataset'] = 42
+ self.assertIn('/group/', self.f)
+ self.assertIn('group/', self.f)
+ self.assertIn('/dataset/', self.f)
+ self.assertIn('dataset/', self.f)
+
+ def test_softlinks(self):
+ """ Broken softlinks are contained, but their members are not """
+ self.f.create_group('grp')
+ self.f['/grp/soft'] = h5py.SoftLink('/mongoose')
+ self.f['/grp/external'] = h5py.ExternalLink('mongoose.hdf5', '/mongoose')
+ self.assertIn('/grp/soft', self.f)
+ self.assertNotIn('/grp/soft/something', self.f)
+ self.assertIn('/grp/external', self.f)
+ self.assertNotIn('/grp/external/something', self.f)
+
+ def test_oddball_paths(self):
+ """ Technically legitimate (but odd-looking) paths """
+ self.f.create_group('x/y/z')
+ self.f['dset'] = 42
+ self.assertIn('/', self.f)
+ self.assertIn('//', self.f)
+ self.assertIn('///', self.f)
+ self.assertIn('.///', self.f)
+ self.assertIn('././/', self.f)
+ grp = self.f['x']
+ self.assertIn('.//x/y/z', self.f)
+ self.assertNotIn('.//x/y/z', grp)
+ self.assertIn('x///', self.f)
+ self.assertIn('./x///', self.f)
+ self.assertIn('dset///', self.f)
+ self.assertIn('/dset//', self.f)
class TestIter(BaseMapping):
diff --git a/h5py/lowtest/test_h5.py b/h5py/tests/old/test_h5.py
similarity index 100%
rename from h5py/lowtest/test_h5.py
rename to h5py/tests/old/test_h5.py
diff --git a/h5py/lowtest/test_h5f.py b/h5py/tests/old/test_h5f.py
similarity index 100%
rename from h5py/lowtest/test_h5f.py
rename to h5py/tests/old/test_h5f.py
diff --git a/h5py/lowtest/test_h5p.py b/h5py/tests/old/test_h5p.py
similarity index 79%
rename from h5py/lowtest/test_h5p.py
rename to h5py/tests/old/test_h5p.py
index c7d0baa..8ca69a6 100644
--- a/h5py/lowtest/test_h5p.py
+++ b/h5py/tests/old/test_h5p.py
@@ -32,7 +32,7 @@ class TestDA(ut.TestCase):
'''
Feature: setting/getting chunk cache size on a dataset access property list
'''
- def test_chuck_cache(self):
+ def test_chunk_cache(self):
'''test get/set chunk cache '''
dalist = h5p.create(h5p.DATASET_ACCESS)
nslots = 10000 # 40kb hash table
@@ -43,6 +43,28 @@ class TestDA(ut.TestCase):
self.assertEqual((nslots, nbytes, w0),
dalist.get_chunk_cache())
+class TestFA(ut.TestCase):
+ '''
+ Feature: setting/getting mdc config on a file access property list
+ '''
+ def test_mdc_config(self):
+ '''test get/set mdc config '''
+ falist = h5p.create(h5p.FILE_ACCESS)
+
+ config = falist.get_mdc_config()
+ falist.set_mdc_config(config)
+
+ def test_set_alignment(self):
+ '''test get/set chunk cache '''
+ falist = h5p.create(h5p.FILE_ACCESS)
+ threshold = 10 * 1024 # threshold of 10kiB
+ alignment = 1024 * 1024 # threshold of 1kiB
+
+ falist.set_alignment(threshold, alignment)
+ self.assertEqual((threshold, alignment),
+ falist.get_alignment())
+
+
class TestPL(ut.TestCase):
def test_obj_track_times(self):
"""
diff --git a/h5py/lowtest/test_h5t.py b/h5py/tests/old/test_h5t.py
similarity index 100%
rename from h5py/lowtest/test_h5t.py
rename to h5py/tests/old/test_h5t.py
diff --git a/h5py/lowtest/test_objects.py b/h5py/tests/old/test_objects.py
similarity index 100%
rename from h5py/lowtest/test_objects.py
rename to h5py/tests/old/test_objects.py
diff --git a/h5py/_hl/tests/test_selections.py b/h5py/tests/old/test_selections.py
similarity index 76%
rename from h5py/_hl/tests/test_selections.py
rename to h5py/tests/old/test_selections.py
index a00a1e3..76f9699 100644
--- a/h5py/_hl/tests/test_selections.py
+++ b/h5py/tests/old/test_selections.py
@@ -55,27 +55,6 @@ class TestTypeGeneration(TestCase):
self.assertEqual(out, np.dtype('i'))
self.assertEqual(format, np.dtype( [('a','i')] ))
- def test_objects(self):
- """ Metadata is stripped from object types """
- dt = h5py.special_dtype(ref=h5py.Reference)
-
- out, format = sel.read_dtypes(dt, ())
- self.assertEqual(out, format)
- self.assertEqual(format, dt)
- self.assertTrue(out.fields is None)
- self.assertTrue(format.fields is not None)
-
- def test_compound_objects(self):
- """ Metadata is stripped from output in compound types"""
- reftype = h5py.special_dtype(ref=h5py.Reference)
-
- dt = np.dtype( [('a','i'), ('b',reftype), ('c','|S10')] )
-
- out, format = sel.read_dtypes(dt, ())
- self.assertEqual(out, format)
- self.assertEqual(format, dt)
- self.assertTrue(all(x[0].fields is None for x in out.fields.values() if x[0].kind == 'O'))
-
class TestScalarSliceRules(TestCase):
diff --git a/h5py/_hl/tests/test_slicing.py b/h5py/tests/old/test_slicing.py
similarity index 94%
rename from h5py/_hl/tests/test_slicing.py
rename to h5py/tests/old/test_slicing.py
index 06321dd..6ff3c8c 100644
--- a/h5py/_hl/tests/test_slicing.py
+++ b/h5py/tests/old/test_slicing.py
@@ -18,7 +18,7 @@
import numpy as np
-from .common import ut, TestCase
+from .common import ut, TestCase, py3
import h5py
from h5py import h5s, h5t, h5d
@@ -297,8 +297,19 @@ class TestFieldNames(BaseSlicing):
self.dset[...] = self.data
def test_read(self):
- """ Test read with field selections """
- self.assertArrayEqual(self.dset['a'], self.data['a'])
+ """ Test read with field selections (bytes and unicode) """
+ if not py3:
+ # Byte strings are only allowed for field names on Py2
+ self.assertArrayEqual(self.dset[b'a'], self.data['a'])
+ self.assertArrayEqual(self.dset[u'a'], self.data['a'])
+
+ def test_unicode_names(self):
+ """ Unicode field names for for read and write """
+ self.assertArrayEqual(self.dset[u'a'], self.data['a'])
+ self.dset[u'a'] = 42
+ data = self.data.copy()
+ data['a'] = 42
+ self.assertArrayEqual(self.dset[u'a'], data['a'])
def test_write(self):
""" Test write with field selections """
diff --git a/h5py/utils.c b/h5py/utils.c
deleted file mode 100644
index 7b3ada9..0000000
--- a/h5py/utils.c
+++ /dev/null
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-{
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-{
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- #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
- (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
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-arg_passed_twice:
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- goto bad;
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-bad:
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-
-static void __Pyx_RaiseArgtupleInvalid(
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-{
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-
-static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
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-{
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- if (Py_TYPE(obj) == type) return 1;
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- name, type->tp_name, Py_TYPE(obj)->tp_name);
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-
-#if PY_MAJOR_VERSION < 3
-static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
- CYTHON_UNUSED PyObject *cause) {
- Py_XINCREF(type);
- if (!value || value == Py_None)
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- Py_INCREF(value);
- if (!tb || tb == Py_None)
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- else {
- Py_INCREF(tb);
- if (!PyTraceBack_Check(tb)) {
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- #if PY_VERSION_HEX < 0x02050000
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- if (PyType_Check(type)) {
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-#if CYTHON_COMPILING_IN_PYPY
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- if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
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- __Pyx_ErrRestore(type, value, tb);
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- Py_XDECREF(value);
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- Py_XDECREF(tb);
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- PyObject* owned_instance = NULL;
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- PyErr_SetString(PyExc_TypeError,
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- PyObject *args;
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- Py_INCREF(value);
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- type, Py_TYPE(value));
- goto bad;
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- else {
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-static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
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- *type = 0;
- *value = 0;
- *tb = 0;
- Py_XDECREF(local_type);
- Py_XDECREF(local_value);
- Py_XDECREF(local_tb);
- return -1;
-}
-
-static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
- if (unlikely(!type)) {
- PyErr_Format(PyExc_SystemError, "Missing type object");
- return 0;
- }
- if (likely(PyObject_TypeCheck(obj, type)))
- return 1;
- PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
- Py_TYPE(obj)->tp_name, type->tp_name);
- return 0;
-}
-
-static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyThreadState *tstate = PyThreadState_GET();
- *type = tstate->exc_type;
- *value = tstate->exc_value;
- *tb = tstate->exc_traceback;
- Py_XINCREF(*type);
- Py_XINCREF(*value);
- Py_XINCREF(*tb);
-#else
- PyErr_GetExcInfo(type, value, tb);
-#endif
-}
-static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
-#if CYTHON_COMPILING_IN_CPYTHON
- PyObject *tmp_type, *tmp_value, *tmp_tb;
- PyThreadState *tstate = PyThreadState_GET();
- tmp_type = tstate->exc_type;
- tmp_value = tstate->exc_value;
- tmp_tb = tstate->exc_traceback;
- tstate->exc_type = type;
- tstate->exc_value = value;
- tstate->exc_traceback = tb;
- Py_XDECREF(tmp_type);
- Py_XDECREF(tmp_value);
- Py_XDECREF(tmp_tb);
-#else
- PyErr_SetExcInfo(type, value, tb);
-#endif
-}
-
-static CYTHON_INLINE hid_t __Pyx_PyInt_from_py_hid_t(PyObject* x) {
- const hid_t neg_one = (hid_t)-1, const_zero = (hid_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hid_t) == sizeof(char)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hid_t) == sizeof(short)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hid_t) == sizeof(int)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hid_t) == sizeof(long)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hid_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hid_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hid_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hid_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hid_t)-1;
- }
-}
-
-static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if ((sizeof(hsize_t) == sizeof(char)) ||
- (sizeof(hsize_t) == sizeof(short))) {
- return PyInt_FromLong((long)val);
- } else if ((sizeof(hsize_t) == sizeof(int)) ||
- (sizeof(hsize_t) == sizeof(long))) {
- if (is_unsigned)
- return PyLong_FromUnsignedLong((unsigned long)val);
- else
- return PyInt_FromLong((long)val);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
- else
- return PyLong_FromLongLong((PY_LONG_LONG)val);
- } else {
- int one = 1; int little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- return _PyLong_FromByteArray(bytes, sizeof(hsize_t),
- little, !is_unsigned);
- }
-}
-
-static CYTHON_INLINE hsize_t __Pyx_PyInt_from_py_hsize_t(PyObject* x) {
- const hsize_t neg_one = (hsize_t)-1, const_zero = (hsize_t)0;
- const int is_unsigned = const_zero < neg_one;
- if (sizeof(hsize_t) == sizeof(char)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedChar(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedChar(x);
- } else if (sizeof(hsize_t) == sizeof(short)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedShort(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedShort(x);
- } else if (sizeof(hsize_t) == sizeof(int)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedInt(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedInt(x);
- } else if (sizeof(hsize_t) == sizeof(long)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLong(x);
- } else if (sizeof(hsize_t) == sizeof(PY_LONG_LONG)) {
- if (is_unsigned)
- return (hsize_t)__Pyx_PyInt_AsUnsignedLongLong(x);
- else
- return (hsize_t)__Pyx_PyInt_AsSignedLongLong(x);
- } else {
- #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
- PyErr_SetString(PyExc_RuntimeError,
- "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
- #else
- hsize_t val;
- PyObject *v = __Pyx_PyNumber_Int(x);
- #if PY_VERSION_HEX < 0x03000000
- if (likely(v) && !PyLong_Check(v)) {
- PyObject *tmp = v;
- v = PyNumber_Long(tmp);
- Py_DECREF(tmp);
- }
- #endif
- if (likely(v)) {
- int one = 1; int is_little = (int)*(unsigned char *)&one;
- unsigned char *bytes = (unsigned char *)&val;
- int ret = _PyLong_AsByteArray((PyLongObject *)v,
- bytes, sizeof(val),
- is_little, !is_unsigned);
- Py_DECREF(v);
- if (likely(!ret))
- return val;
- }
- #endif
- return (hsize_t)-1;
- }
-}
-
-static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
- const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned char" :
- "value too large to convert to unsigned char");
- }
- return (unsigned char)-1;
- }
- return (unsigned char)val;
- }
- return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
- const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned short" :
- "value too large to convert to unsigned short");
- }
- return (unsigned short)-1;
- }
- return (unsigned short)val;
- }
- return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
- const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(unsigned int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(unsigned int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to unsigned int" :
- "value too large to convert to unsigned int");
- }
- return (unsigned int)-1;
- }
- return (unsigned int)val;
- }
- return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
-}
-
-static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
- const char neg_one = (char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to char" :
- "value too large to convert to char");
- }
- return (char)-1;
- }
- return (char)val;
- }
- return (char)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
- const short neg_one = (short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to short" :
- "value too large to convert to short");
- }
- return (short)-1;
- }
- return (short)val;
- }
- return (short)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
- const signed char neg_one = (signed char)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed char) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed char)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed char" :
- "value too large to convert to signed char");
- }
- return (signed char)-1;
- }
- return (signed char)val;
- }
- return (signed char)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
- const signed short neg_one = (signed short)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed short) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed short)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed short" :
- "value too large to convert to signed short");
- }
- return (signed short)-1;
- }
- return (signed short)val;
- }
- return (signed short)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
- const signed int neg_one = (signed int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(signed int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(signed int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to signed int" :
- "value too large to convert to signed int");
- }
- return (signed int)-1;
- }
- return (signed int)val;
- }
- return (signed int)__Pyx_PyInt_AsSignedLong(x);
-}
-
-static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) {
- const int neg_one = (int)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
- if (sizeof(int) < sizeof(long)) {
- long val = __Pyx_PyInt_AsLong(x);
- if (unlikely(val != (long)(int)val)) {
- if (!unlikely(val == -1 && PyErr_Occurred())) {
- PyErr_SetString(PyExc_OverflowError,
- (is_unsigned && unlikely(val < 0)) ?
- "can't convert negative value to int" :
- "value too large to convert to int");
- }
- return (int)-1;
- }
- return (int)val;
- }
- return (int)__Pyx_PyInt_AsLong(x);
-}
-
-static CYTHON_INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
- const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned long");
- return (unsigned long)-1;
- }
- return (unsigned long)PyLong_AsUnsignedLong(x);
- } else {
- return (unsigned long)PyLong_AsLong(x);
- }
- } else {
- unsigned long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned long)-1;
- val = __Pyx_PyInt_AsUnsignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
- const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to unsigned PY_LONG_LONG");
- return (unsigned PY_LONG_LONG)-1;
- }
- return (unsigned PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (unsigned PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- unsigned PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (unsigned PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
- const long neg_one = (long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to long");
- return (long)-1;
- }
- return (long)PyLong_AsUnsignedLong(x);
- } else {
- return (long)PyLong_AsLong(x);
- }
- } else {
- long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (long)-1;
- val = __Pyx_PyInt_AsLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
- const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to PY_LONG_LONG");
- return (PY_LONG_LONG)-1;
- }
- return (PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
- const signed long neg_one = (signed long)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed long");
- return (signed long)-1;
- }
- return (signed long)PyLong_AsUnsignedLong(x);
- } else {
- return (signed long)PyLong_AsLong(x);
- }
- } else {
- signed long val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed long)-1;
- val = __Pyx_PyInt_AsSignedLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
- const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
- const int is_unsigned = neg_one > const_zero;
-#if PY_VERSION_HEX < 0x03000000
- if (likely(PyInt_Check(x))) {
- long val = PyInt_AS_LONG(x);
- if (is_unsigned && unlikely(val < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)val;
- } else
-#endif
- if (likely(PyLong_Check(x))) {
- if (is_unsigned) {
- if (unlikely(Py_SIZE(x) < 0)) {
- PyErr_SetString(PyExc_OverflowError,
- "can't convert negative value to signed PY_LONG_LONG");
- return (signed PY_LONG_LONG)-1;
- }
- return (signed PY_LONG_LONG)PyLong_AsUnsignedLongLong(x);
- } else {
- return (signed PY_LONG_LONG)PyLong_AsLongLong(x);
- }
- } else {
- signed PY_LONG_LONG val;
- PyObject *tmp = __Pyx_PyNumber_Int(x);
- if (!tmp) return (signed PY_LONG_LONG)-1;
- val = __Pyx_PyInt_AsSignedLongLong(tmp);
- Py_DECREF(tmp);
- return val;
- }
-}
-
-static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno,
- CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename) {
- PyObject *old_exc, *old_val, *old_tb;
- PyObject *ctx;
- __Pyx_ErrFetch(&old_exc, &old_val, &old_tb);
- #if PY_MAJOR_VERSION < 3
- ctx = PyString_FromString(name);
- #else
- ctx = PyUnicode_FromString(name);
- #endif
- __Pyx_ErrRestore(old_exc, old_val, old_tb);
- if (!ctx) {
- PyErr_WriteUnraisable(Py_None);
- } else {
- PyErr_WriteUnraisable(ctx);
- Py_DECREF(ctx);
- }
-}
-
-static int __Pyx_check_binary_version(void) {
- char ctversion[4], rtversion[4];
- PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
- PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
- if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
- char message[200];
- PyOS_snprintf(message, sizeof(message),
- "compiletime version %s of module '%.100s' "
- "does not match runtime version %s",
- ctversion, __Pyx_MODULE_NAME, rtversion);
- #if PY_VERSION_HEX < 0x02050000
- return PyErr_Warn(NULL, message);
- #else
- return PyErr_WarnEx(NULL, message, 1);
- #endif
- }
- return 0;
-}
-
-static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
- if (!d) {
- PyErr_Clear();
- d = PyDict_New();
- if (!d)
- goto bad;
- Py_INCREF(d);
- if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
- goto bad;
- }
- tmp.fp = f;
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3&&PY_MINOR_VERSION==0)
- cobj = PyCapsule_New(tmp.p, sig, 0);
-#else
- cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0);
-#endif
- if (!cobj)
- goto bad;
- if (PyDict_SetItemString(d, name, cobj) < 0)
- goto bad;
- Py_DECREF(cobj);
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(cobj);
- Py_XDECREF(d);
- return -1;
-}
-
-#ifndef __PYX_HAVE_RT_ImportModule
-#define __PYX_HAVE_RT_ImportModule
-static PyObject *__Pyx_ImportModule(const char *name) {
- PyObject *py_name = 0;
- PyObject *py_module = 0;
- py_name = __Pyx_PyIdentifier_FromString(name);
- if (!py_name)
- goto bad;
- py_module = PyImport_Import(py_name);
- Py_DECREF(py_name);
- return py_module;
-bad:
- Py_XDECREF(py_name);
- return 0;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportType
-#define __PYX_HAVE_RT_ImportType
-static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
- size_t size, int strict)
-{
- PyObject *py_module = 0;
- PyObject *result = 0;
- PyObject *py_name = 0;
- char warning[200];
- Py_ssize_t basicsize;
-#ifdef Py_LIMITED_API
- PyObject *py_basicsize;
-#endif
- py_module = __Pyx_ImportModule(module_name);
- if (!py_module)
- goto bad;
- py_name = __Pyx_PyIdentifier_FromString(class_name);
- if (!py_name)
- goto bad;
- result = PyObject_GetAttr(py_module, py_name);
- Py_DECREF(py_name);
- py_name = 0;
- Py_DECREF(py_module);
- py_module = 0;
- if (!result)
- goto bad;
- if (!PyType_Check(result)) {
- PyErr_Format(PyExc_TypeError,
- "%s.%s is not a type object",
- module_name, class_name);
- goto bad;
- }
-#ifndef Py_LIMITED_API
- basicsize = ((PyTypeObject *)result)->tp_basicsize;
-#else
- py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
- if (!py_basicsize)
- goto bad;
- basicsize = PyLong_AsSsize_t(py_basicsize);
- Py_DECREF(py_basicsize);
- py_basicsize = 0;
- if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
- goto bad;
-#endif
- if (!strict && (size_t)basicsize > size) {
- PyOS_snprintf(warning, sizeof(warning),
- "%s.%s size changed, may indicate binary incompatibility",
- module_name, class_name);
- #if PY_VERSION_HEX < 0x02050000
- if (PyErr_Warn(NULL, warning) < 0) goto bad;
- #else
- if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
- #endif
- }
- else if ((size_t)basicsize != size) {
- PyErr_Format(PyExc_ValueError,
- "%s.%s has the wrong size, try recompiling",
- module_name, class_name);
- goto bad;
- }
- return (PyTypeObject *)result;
-bad:
- Py_XDECREF(py_module);
- Py_XDECREF(result);
- return NULL;
-}
-#endif
-
-#ifndef __PYX_HAVE_RT_ImportFunction
-#define __PYX_HAVE_RT_ImportFunction
-static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
- PyObject *d = 0;
- PyObject *cobj = 0;
- union {
- void (*fp)(void);
- void *p;
- } tmp;
- d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
- if (!d)
- goto bad;
- cobj = PyDict_GetItemString(d, funcname);
- if (!cobj) {
- PyErr_Format(PyExc_ImportError,
- "%s does not export expected C function %s",
- PyModule_GetName(module), funcname);
- goto bad;
- }
-#if PY_VERSION_HEX >= 0x02070000 && !(PY_MAJOR_VERSION==3 && PY_MINOR_VERSION==0)
- if (!PyCapsule_IsValid(cobj, sig)) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
- goto bad;
- }
- tmp.p = PyCapsule_GetPointer(cobj, sig);
-#else
- {const char *desc, *s1, *s2;
- desc = (const char *)PyCObject_GetDesc(cobj);
- if (!desc)
- goto bad;
- s1 = desc; s2 = sig;
- while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
- if (*s1 != *s2) {
- PyErr_Format(PyExc_TypeError,
- "C function %s.%s has wrong signature (expected %s, got %s)",
- PyModule_GetName(module), funcname, sig, desc);
- goto bad;
- }
- tmp.p = PyCObject_AsVoidPtr(cobj);}
-#endif
- *f = tmp.fp;
- if (!(*f))
- goto bad;
- Py_DECREF(d);
- return 0;
-bad:
- Py_XDECREF(d);
- return -1;
-}
-#endif
-
-static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
- int start = 0, mid = 0, end = count - 1;
- if (end >= 0 && code_line > entries[end].code_line) {
- return count;
- }
- while (start < end) {
- mid = (start + end) / 2;
- if (code_line < entries[mid].code_line) {
- end = mid;
- } else if (code_line > entries[mid].code_line) {
- start = mid + 1;
- } else {
- return mid;
- }
- }
- if (code_line <= entries[mid].code_line) {
- return mid;
- } else {
- return mid + 1;
- }
-}
-static PyCodeObject *__pyx_find_code_object(int code_line) {
- PyCodeObject* code_object;
- int pos;
- if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
- return NULL;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
- return NULL;
- }
- code_object = __pyx_code_cache.entries[pos].code_object;
- Py_INCREF(code_object);
- return code_object;
-}
-static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
- int pos, i;
- __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
- if (unlikely(!code_line)) {
- return;
- }
- if (unlikely(!entries)) {
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
- if (likely(entries)) {
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = 64;
- __pyx_code_cache.count = 1;
- entries[0].code_line = code_line;
- entries[0].code_object = code_object;
- Py_INCREF(code_object);
- }
- return;
- }
- pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
- if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
- PyCodeObject* tmp = entries[pos].code_object;
- entries[pos].code_object = code_object;
- Py_DECREF(tmp);
- return;
- }
- if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
- int new_max = __pyx_code_cache.max_count + 64;
- entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
- __pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
- if (unlikely(!entries)) {
- return;
- }
- __pyx_code_cache.entries = entries;
- __pyx_code_cache.max_count = new_max;
- }
- for (i=__pyx_code_cache.count; i>pos; i--) {
- entries[i] = entries[i-1];
- }
- entries[pos].code_line = code_line;
- entries[pos].code_object = code_object;
- __pyx_code_cache.count++;
- Py_INCREF(code_object);
-}
-
-#include "compile.h"
-#include "frameobject.h"
-#include "traceback.h"
-static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
- const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_srcfile = 0;
- PyObject *py_funcname = 0;
- #if PY_MAJOR_VERSION < 3
- py_srcfile = PyString_FromString(filename);
- #else
- py_srcfile = PyUnicode_FromString(filename);
- #endif
- if (!py_srcfile) goto bad;
- if (c_line) {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #else
- py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
- #endif
- }
- else {
- #if PY_MAJOR_VERSION < 3
- py_funcname = PyString_FromString(funcname);
- #else
- py_funcname = PyUnicode_FromString(funcname);
- #endif
- }
- if (!py_funcname) goto bad;
- py_code = __Pyx_PyCode_New(
- 0, /*int argcount,*/
- 0, /*int kwonlyargcount,*/
- 0, /*int nlocals,*/
- 0, /*int stacksize,*/
- 0, /*int flags,*/
- __pyx_empty_bytes, /*PyObject *code,*/
- __pyx_empty_tuple, /*PyObject *consts,*/
- __pyx_empty_tuple, /*PyObject *names,*/
- __pyx_empty_tuple, /*PyObject *varnames,*/
- __pyx_empty_tuple, /*PyObject *freevars,*/
- __pyx_empty_tuple, /*PyObject *cellvars,*/
- py_srcfile, /*PyObject *filename,*/
- py_funcname, /*PyObject *name,*/
- py_line, /*int firstlineno,*/
- __pyx_empty_bytes /*PyObject *lnotab*/
- );
- Py_DECREF(py_srcfile);
- Py_DECREF(py_funcname);
- return py_code;
-bad:
- Py_XDECREF(py_srcfile);
- Py_XDECREF(py_funcname);
- return NULL;
-}
-static void __Pyx_AddTraceback(const char *funcname, int c_line,
- int py_line, const char *filename) {
- PyCodeObject *py_code = 0;
- PyObject *py_globals = 0;
- PyFrameObject *py_frame = 0;
- py_code = __pyx_find_code_object(c_line ? c_line : py_line);
- if (!py_code) {
- py_code = __Pyx_CreateCodeObjectForTraceback(
- funcname, c_line, py_line, filename);
- if (!py_code) goto bad;
- __pyx_insert_code_object(c_line ? c_line : py_line, py_code);
- }
- py_globals = PyModule_GetDict(__pyx_m);
- if (!py_globals) goto bad;
- py_frame = PyFrame_New(
- PyThreadState_GET(), /*PyThreadState *tstate,*/
- py_code, /*PyCodeObject *code,*/
- py_globals, /*PyObject *globals,*/
- 0 /*PyObject *locals*/
- );
- if (!py_frame) goto bad;
- py_frame->f_lineno = py_line;
- PyTraceBack_Here(py_frame);
-bad:
- Py_XDECREF(py_code);
- Py_XDECREF(py_frame);
-}
-
-static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
- while (t->p) {
- #if PY_MAJOR_VERSION < 3
- if (t->is_unicode) {
- *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
- } else if (t->intern) {
- *t->p = PyString_InternFromString(t->s);
- } else {
- *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
- }
- #else /* Python 3+ has unicode identifiers */
- if (t->is_unicode | t->is_str) {
- if (t->intern) {
- *t->p = PyUnicode_InternFromString(t->s);
- } else if (t->encoding) {
- *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
- } else {
- *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
- }
- } else {
- *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
- }
- #endif
- if (!*t->p)
- return -1;
- ++t;
- }
- return 0;
-}
-
-static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
- int is_true = x == Py_True;
- if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
- else return PyObject_IsTrue(x);
-}
-static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
- PyNumberMethods *m;
- const char *name = NULL;
- PyObject *res = NULL;
-#if PY_VERSION_HEX < 0x03000000
- if (PyInt_Check(x) || PyLong_Check(x))
-#else
- if (PyLong_Check(x))
-#endif
- return Py_INCREF(x), x;
- m = Py_TYPE(x)->tp_as_number;
-#if PY_VERSION_HEX < 0x03000000
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Int(x);
- }
- else if (m && m->nb_long) {
- name = "long";
- res = PyNumber_Long(x);
- }
-#else
- if (m && m->nb_int) {
- name = "int";
- res = PyNumber_Long(x);
- }
-#endif
- if (res) {
-#if PY_VERSION_HEX < 0x03000000
- if (!PyInt_Check(res) && !PyLong_Check(res)) {
-#else
- if (!PyLong_Check(res)) {
-#endif
- PyErr_Format(PyExc_TypeError,
- "__%s__ returned non-%s (type %.200s)",
- name, name, Py_TYPE(res)->tp_name);
- Py_DECREF(res);
- return NULL;
- }
- }
- else if (!PyErr_Occurred()) {
- PyErr_SetString(PyExc_TypeError,
- "an integer is required");
- }
- return res;
-}
-static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
- Py_ssize_t ival;
- PyObject* x = PyNumber_Index(b);
- if (!x) return -1;
- ival = PyInt_AsSsize_t(x);
- Py_DECREF(x);
- return ival;
-}
-static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
-#if PY_VERSION_HEX < 0x02050000
- if (ival <= LONG_MAX)
- return PyInt_FromLong((long)ival);
- else {
- unsigned char *bytes = (unsigned char *) &ival;
- int one = 1; int little = (int)*(unsigned char*)&one;
- return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
- }
-#else
- return PyInt_FromSize_t(ival);
-#endif
-}
-static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
- unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
- if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
- return (size_t)-1;
- } else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
- PyErr_SetString(PyExc_OverflowError,
- "value too large to convert to size_t");
- return (size_t)-1;
- }
- return (size_t)val;
-}
-
-
-#endif /* Py_PYTHON_H */
diff --git a/h5py/version.py b/h5py/version.py
index 777b7fd..ea8e89f 100644
--- a/h5py/version.py
+++ b/h5py/version.py
@@ -12,7 +12,8 @@ from distutils.version import StrictVersion as _sv
import sys
import numpy
-version = "2.2.1"
+version = "2.4.0"
+
_exp = _sv(version)
version_tuple = _exp.version + ((''.join(str(x) for x in _exp.prerelease),) if _exp.prerelease is not None else ('',))
diff --git a/lzf/.DS_Store b/lzf/.DS_Store
new file mode 100644
index 0000000..87b138c
Binary files /dev/null and b/lzf/.DS_Store differ
diff --git a/lzf/lzf/lzf_c.c b/lzf/lzf/lzf_c.c
index 0b5d816..fbfd4cc 100644
--- a/lzf/lzf/lzf_c.c
+++ b/lzf/lzf/lzf_c.c
@@ -120,7 +120,7 @@ lzf_compress (const void *const in_data, unsigned int in_len,
* and fails to support both assumptions is windows 64 bit, we make a
* special workaround for it.
*/
-#if defined (WIN32) && defined (_M_X64)
+#if ( defined (WIN32) && defined (_M_X64) ) || defined (_WIN64)
unsigned _int64 off; /* workaround for missing POSIX compliance */
#else
unsigned long off;
diff --git a/setup.cfg b/setup.cfg
new file mode 100644
index 0000000..861a9f5
--- /dev/null
+++ b/setup.cfg
@@ -0,0 +1,5 @@
+[egg_info]
+tag_build =
+tag_date = 0
+tag_svn_revision = 0
+
diff --git a/setup.py b/setup.py
index e6e1ed7..be3f8e0 100755
--- a/setup.py
+++ b/setup.py
@@ -1,227 +1,89 @@
#!/usr/bin/env python
-from distutils.core import setup
-from distutils.extension import Extension
-from distutils.cmd import Command
-from distutils.version import LooseVersion
-import warnings
-import sys, os
-import os.path as op
-from functools import reduce
-import numpy
-
-import configure # Sticky-options configuration and version auto-detect
-
-VERSION = '2.2.1'
-
-
-# --- Autodetect Cython -------------------------------------------------------
+"""
+ This is the main setup script for h5py (http://www.h5py.org).
+
+ Most of the functionality is provided in two separate modules:
+ setup_configure, which manages compile-time/Cython-time build options
+ for h5py, and setup_build, which handles the actual compilation process.
+"""
-HAVE_CYTHON = False
try:
- import Cython.Compiler.Version
- s = LooseVersion(Cython.Compiler.Version.version)
- if s.version[0:2] < [0, 13]:
- warnings.warn("Cython version %s too old; not used" % s.vstring)
- raise ImportError
- from Cython.Distutils import build_ext
- SUFFIX = '.pyx'
- HAVE_CYTHON = True
+ from setuptools import Extension, setup
except ImportError:
- from distutils.command.build_ext import build_ext
- SUFFIX = '.c'
+ from distutils.core import setup
+ from distutils.extension import Extension
+from distutils.cmd import Command
+from distutils.dist import Distribution
+import sys
+import os
+import os.path as op
if sys.version_info[0] >= 3:
- # Shamelessly stolen from Cython 0.14
import lib2to3.refactor
from distutils.command.build_py \
import build_py_2to3 as build_py
else:
from distutils.command.build_py import build_py
-
-
-# --- Support functions and "super-option" configuring ------------------------
-
-def localpath(*args):
- return op.abspath(reduce(op.join, (op.dirname(__file__),)+args))
-
-def configure_cython(settings, modules):
- """ Set up the Cython build environment.
-
- If configuration settings have changed since the last time Cython was
- run, re-write the file "config.pxi". Also bump the utime of all the
- Cython modules to trigger a rebuild.
- """
-
- try:
- f = open(localpath('h5py/config.pxi'),'rb')
- oldcontents = f.read()
- except IOError:
- oldcontents = b""
- else:
- f.close()
- newcontents = """\
-# This file is automatically generated by the h5py setup script. Don't modify.
-
-DEF MPI = %(mpi)s
-DEF HDF5_VERSION = %(hdf5_version)s
-"""
- newcontents %= settings
- newcontents = newcontents.encode('utf-8')
-
- # Only reconfigure and rebuild if settings have actually changed.
- if newcontents != oldcontents:
- with open(localpath('h5py/config.pxi'),'wb') as f:
- f.write(newcontents)
- for m in MODULES:
- os.utime(localpath('h5py',m+'.pyx'),None)
-
-
-# --- Pre-compiling API generation --------------------------------------------
-
-if not op.isfile(localpath('h5py','defs.pyx')):
- if not HAVE_CYTHON:
- raise ValueError("A modern version of Cython is required to build from source")
- import api_gen
- api_gen.run()
+import setup_build, setup_configure
-# --- Determine configuration settings ----------------------------------------
+VERSION = '2.4.0'
-settings = configure.scrape_eargs() # lowest priority
-settings.update(configure.scrape_cargs()) # highest priority
-HDF5 = settings.get('hdf5')
-HDF5_VERSION = settings.get('hdf5_version')
-
-MPI = settings.setdefault('mpi', False)
-if MPI:
- if not HAVE_CYTHON:
- raise ValueError("Cython is required to compile h5py in MPI mode")
- try:
- import mpi4py
- except ImportError:
- raise ImportError("mpi4py is required to compile h5py in MPI mode")
-
-
-# --- Configure Cython and create extensions ----------------------------------
-
-if sys.platform.startswith('win'):
- COMPILER_SETTINGS = {
- 'libraries' : ['hdf5dll18','hdf5_hldll'],
- 'include_dirs' : [numpy.get_include(), localpath('lzf'),
- localpath('win_include')],
- 'library_dirs' : [],
- 'define_macros' : [('H5_USE_16_API', None), ('_HDF5USEDLL_', None)]
- }
- if HDF5 is not None:
- COMPILER_SETTINGS['include_dirs'] += [op.join(HDF5, 'include')]
- COMPILER_SETTINGS['library_dirs'] += [op.join(HDF5, 'dll')]
-else:
- COMPILER_SETTINGS = {
- 'libraries' : ['hdf5', 'hdf5_hl'],
- 'include_dirs' : [numpy.get_include(), localpath('lzf')],
- 'library_dirs' : [],
- 'define_macros' : [('H5_USE_16_API', None)]
- }
- if HDF5 is not None:
- COMPILER_SETTINGS['include_dirs'] += [op.join(HDF5, 'include')]
- COMPILER_SETTINGS['library_dirs'] += [op.join(HDF5, 'lib'), op.join(HDF5, 'lib64')]
- elif sys.platform == 'darwin':
- # putting here both macports and homebrew paths will generate
- # "ld: warning: dir not found" at the linking phase
- COMPILER_SETTINGS['include_dirs'] += ['/opt/local/include'] # macports
- COMPILER_SETTINGS['library_dirs'] += ['/opt/local/lib'] # macports
- COMPILER_SETTINGS['include_dirs'] += ['/usr/local/include'] # homebrew
- COMPILER_SETTINGS['library_dirs'] += ['/usr/local/lib'] # homebrew
- elif sys.platform.startswith('freebsd'):
- COMPILER_SETTINGS['include_dirs'] += ['/usr/local/include'] # homebrew
- COMPILER_SETTINGS['library_dirs'] += ['/usr/local/lib'] # homebrew
- if MPI:
- COMPILER_SETTINGS['include_dirs'] += [mpi4py.get_include()]
- COMPILER_SETTINGS['runtime_library_dirs'] = [op.abspath(x) for x in COMPILER_SETTINGS['library_dirs']]
-
-MODULES = ['defs','_errors','_objects','_proxy', 'h5fd', 'h5z',
- 'h5','h5i','h5r','utils',
- '_conv', 'h5t','h5s',
- 'h5p',
- 'h5d', 'h5a', 'h5f', 'h5g',
- 'h5l', 'h5o',
- 'h5ds', 'h5ac']
-
-# No Cython, no point in configuring
-if HAVE_CYTHON:
-
- # Don't autodetect if version is manually given
- if HDF5_VERSION is None:
- HDF5_VERSION = configure.autodetect(COMPILER_SETTINGS['library_dirs'])
-
- if HDF5_VERSION is None:
- HDF5_VERSION = (1, 8, 4)
- configure.printerr("HDF5 autodetection failed; building for 1.8.4+")
-
- settings['hdf5_version'] = HDF5_VERSION
- configure_cython(settings, MODULES)
-
-else:
- configure.printerr("Cython not present; building for HDF5 1.8.4+")
-
-EXTRA_SRC = {'h5z': [ localpath("lzf/lzf_filter.c"),
- localpath("lzf/lzf/lzf_c.c"),
- localpath("lzf/lzf/lzf_d.c")]}
-
-def make_extension(module):
- sources = [op.join('h5py', module+SUFFIX)] + EXTRA_SRC.get(module, [])
- return Extension('h5py.'+module, sources, **COMPILER_SETTINGS)
-
-EXTENSIONS = [make_extension(m) for m in MODULES]
-
-
-# --- Custom distutils commands -----------------------------------------------
+# --- Custom Distutils commands -----------------------------------------------
class test(Command):
- """Run the test suite."""
+ """
+ Custom Distutils command to run the h5py test suite.
+
+ This command will invoke build/build_ext if the project has not
+ already been built. It then patches in the build directory to
+ sys.path and runs the test suite directly.
+ """
description = "Run the test suite"
- user_options = [('verbosity=', 'V', 'set test report verbosity')]
+ user_options = [('detail', 'd', 'Display additional test information')]
def initialize_options(self):
- self.verbosity = 0
+ self.detail = False
def finalize_options(self):
- try:
- self.verbosity = int(self.verbosity)
- except ValueError:
- raise ValueError('verbosity must be an integer.')
+ self.detail = bool(self.detail)
def run(self):
+ """ Called by Distutils when this command is run """
import sys
py_version = sys.version_info[:2]
- if py_version == (2,7) or py_version >= (3,2):
+ if py_version != (2, 6):
import unittest
else:
try:
import unittest2 as unittest
except ImportError:
- raise ImportError(
- "unittest2 is required to run tests with python-%d.%d"
- % py_version
- )
+ raise ImportError( "unittest2 is required to run tests with Python 2.6")
+
buildobj = self.distribution.get_command_obj('build')
buildobj.run()
+
oldpath = sys.path
try:
sys.path = [op.abspath(buildobj.build_lib)] + oldpath
- suite = unittest.TestLoader().discover(op.join(buildobj.build_lib,'h5py'))
- result = unittest.TextTestRunner(verbosity=self.verbosity+1).run(suite)
+ import h5py
+ result = h5py.run_tests(verbose=self.detail)
if not result.wasSuccessful():
sys.exit(1)
finally:
sys.path = oldpath
-
+
+
+CMDCLASS = {'build_py': build_py,
+ 'build_ext': setup_build.h5py_build_ext,
+ 'configure': setup_configure.configure,
+ 'test': test, }
# --- Distutils setup and metadata --------------------------------------------
@@ -256,14 +118,14 @@ A strong emphasis on automatic conversion between Python (Numpy) datatypes and
data structures and their HDF5 equivalents vastly simplifies the process of
reading and writing data from Python.
-Supports HDF5 versions 1.8.3 and higher. On Windows, HDF5 is included with
+Supports HDF5 versions 1.8.4 and higher. On Windows, HDF5 is included with
the installer.
"""
if os.name == 'nt':
- package_data = {'h5py': ['*.pyx', '*.dll']}
+ package_data = {'h5py': ['*.dll']}
else:
- package_data = {'h5py': ['*.pyx']}
+ package_data = {'h5py': []}
setup(
name = 'h5py',
@@ -276,10 +138,11 @@ setup(
maintainer = 'Andrew Collette',
maintainer_email = 'andrew dot collette at gmail dot com',
url = 'http://www.h5py.org',
- download_url = 'http://code.google.com/p/h5py/downloads/list',
- packages = ['h5py', 'h5py._hl', 'h5py._hl.tests', 'h5py.lowtest'],
+ download_url = 'https://pypi.python.org/pypi/h5py',
+ packages = ['h5py', 'h5py._hl', 'h5py.tests', 'h5py.tests.old', 'h5py.tests.hl'],
package_data = package_data,
- ext_modules = EXTENSIONS,
- requires = ['numpy (>=1.0.1)'],
- cmdclass = {'build_ext': build_ext, 'test': test, 'build_py':build_py}
+ ext_modules = [Extension('h5py.x',['x.c'])], # To trick build into running build_ext
+ requires = ['numpy (>=1.6.1)', 'Cython (>=0.17)'],
+ install_requires = ['numpy>=1.6.1', 'Cython>=0.17'],
+ cmdclass = CMDCLASS,
)
diff --git a/setup_build.py b/setup_build.py
new file mode 100644
index 0000000..a65e767
--- /dev/null
+++ b/setup_build.py
@@ -0,0 +1,136 @@
+
+"""
+ Implements a custom Distutils build_ext replacement, which handles the
+ full extension module build process, from api_gen to C compilation and
+ linking.
+"""
+
+try:
+ from setuptools import Extension
+except ImportError:
+ from distutils.extension import Extension
+from distutils.command.build_ext import build_ext
+import sys
+import os
+import os.path as op
+from functools import reduce
+import api_gen
+
+
+def localpath(*args):
+ return op.abspath(reduce(op.join, (op.dirname(__file__),)+args))
+
+
+MODULES = ['defs','_errors','_objects','_proxy', 'h5fd', 'h5z',
+ 'h5','h5i','h5r','utils',
+ '_conv', 'h5t','h5s',
+ 'h5p',
+ 'h5d', 'h5a', 'h5f', 'h5g',
+ 'h5l', 'h5o',
+ 'h5ds', 'h5ac']
+
+
+EXTRA_SRC = {'h5z': [ localpath("lzf/lzf_filter.c"),
+ localpath("lzf/lzf/lzf_c.c"),
+ localpath("lzf/lzf/lzf_d.c")]}
+
+
+if sys.platform.startswith('win'):
+ COMPILER_SETTINGS = {
+ 'libraries' : ['h5py_hdf5', 'h5py_hdf5_hl'],
+ 'include_dirs' : [localpath('lzf'), localpath('windows')],
+ 'library_dirs' : [],
+ 'define_macros' : [('H5_USE_16_API', None), ('_HDF5USEDLL_', None)] }
+
+else:
+ COMPILER_SETTINGS = {
+ 'libraries' : ['hdf5', 'hdf5_hl'],
+ 'include_dirs' : [localpath('lzf'), '/opt/local/include', '/usr/local/include'],
+ 'library_dirs' : ['/opt/local/lib', '/usr/local/lib'],
+ 'define_macros' : [('H5_USE_16_API', None)] }
+
+
+class h5py_build_ext(build_ext):
+
+ """
+ Custom distutils command which encapsulates api_gen pre-building,
+ Cython building, and C compilation.
+
+ Also handles making the Extension modules, since we can't rely on
+ NumPy being present in the main body of the setup script.
+ """
+
+ @staticmethod
+ def _make_extensions(config):
+ """ Produce a list of Extension instances which can be passed to
+ cythonize().
+
+ This is the point at which custom directories, MPI options, etc.
+ enter the build process.
+ """
+ import numpy
+
+ settings = COMPILER_SETTINGS.copy()
+ settings['include_dirs'] += [numpy.get_include()]
+ if config.mpi:
+ import mpi4py
+ settings['include_dirs'] += [mpi4py.get_include()]
+
+ # Ensure a custom location appears first, so we don't get a copy of
+ # HDF5 from some default location in COMPILER_SETTINGS
+ if config.hdf5 is not None:
+ settings['include_dirs'].insert(0, op.join(config.hdf5, 'include'))
+ settings['library_dirs'].insert(0, op.join(config.hdf5, 'lib'))
+
+ # TODO: should this only be done on UNIX?
+ if os.name != 'nt':
+ settings['runtime_library_dirs'] = settings['library_dirs']
+
+ def make_extension(module):
+ sources = [localpath('h5py', module+'.pyx')] + EXTRA_SRC.get(module, [])
+ return Extension('h5py.'+module, sources, **settings)
+
+ return [make_extension(m) for m in MODULES]
+
+
+ def run(self):
+ """ Distutils calls this method to run the command """
+
+ from Cython.Build import cythonize
+
+ # Provides all of our build options
+ config = self.distribution.get_command_obj('configure')
+ config.run()
+
+ defs_file = localpath('h5py', 'defs.pyx')
+ func_file = localpath('h5py', 'api_functions.txt')
+ config_file = localpath('h5py', 'config.pxi')
+
+ # Rebuild low-level defs if missing or stale
+ if not op.isfile(defs_file) or os.stat(func_file).st_mtime > os.stat(defs_file).st_mtime:
+ print("Executing api_gen rebuild of defs")
+ api_gen.run()
+
+ # Rewrite config.pxi file if needed
+ if not op.isfile(config_file) or config.rebuild_required:
+ with open(config_file, 'wb') as f:
+ s = """\
+# This file is automatically generated by the h5py setup script. Don't modify.
+
+DEF MPI = %(mpi)s
+DEF HDF5_VERSION = %(version)s
+"""
+ s %= {'mpi': bool(config.mpi),
+ 'version': tuple(int(x) for x in config.hdf5_version.split('.'))}
+ s = s.encode('utf-8')
+ f.write(s)
+
+ # Run Cython
+ self.extensions = cythonize(self._make_extensions(config),
+ force=config.rebuild_required or self.force)
+
+ # Perform the build
+ build_ext.run(self)
+
+ # Mark the configuration as built
+ config.reset_rebuild()
diff --git a/setup_configure.py b/setup_configure.py
new file mode 100644
index 0000000..fb69413
--- /dev/null
+++ b/setup_configure.py
@@ -0,0 +1,229 @@
+
+"""
+ Implements a new custom Distutils command for handling library
+ configuration.
+
+ The "configure" command here doesn't directly affect things like
+ config.pxi; rather, it exists to provide a set of attributes that are
+ used by the build_ext replacement in setup_build.py.
+
+ Options from the command line and environment variables are stored
+ between invocations in a pickle file. This allows configuring the library
+ once and e.g. calling "build" and "test" without recompiling everything
+ or explicitly providing the same options every time.
+
+ This module also contains the auto-detection logic for figuring out
+ the currently installed HDF5 version.
+"""
+
+from distutils.cmd import Command
+import os
+import os.path as op
+import sys
+import pickle
+
+def loadpickle():
+ """ Load settings dict from the pickle file """
+ try:
+ with open('h5config.pkl','rb') as f:
+ cfg = pickle.load(f)
+ if not isinstance(cfg, dict): raise TypeError
+ except Exception:
+ return {}
+ return cfg
+
+
+def savepickle(dct):
+ """ Save settings dict to the pickle file """
+ with open('h5config.pkl','wb') as f:
+ pickle.dump(dct, f, protocol=0)
+
+
+def validate_version(s):
+ """ Ensure that s contains an X.Y.Z format version string, or ValueError.
+ """
+ try:
+ tpl = tuple(int(x) for x in s.split('.'))
+ if len(tpl) != 3: raise ValueError
+ except Exception:
+ raise ValueError("HDF5 version string must be in X.Y.Z format")
+
+
+class EnvironmentOptions(object):
+
+ """
+ Convenience class representing the current environment variables.
+ """
+
+ def __init__(self):
+ self.hdf5 = os.environ.get('HDF5_DIR')
+ self.hdf5_version = os.environ.get('HDF5_VERSION')
+ if self.hdf5_version is not None:
+ validate_version(self.hdf5_version)
+
+
+class configure(Command):
+
+ """
+ Configure build options for h5py: custom path to HDF5, version of
+ the HDF5 library, and whether MPI is enabled.
+
+ Options come from the following sources, in order of priority:
+
+ 1. Current command-line options
+ 2. Old command-line options
+ 3. Current environment variables
+ 4. Old environment variables
+ 5. Autodetection
+
+ When options change, the rebuild_required attribute is set, and
+ may only be reset by calling reset_rebuild(). The custom build_ext
+ command does this.s
+ """
+
+ description = "Configure h5py build options"
+
+ user_options = [('hdf5=', 'h', 'Custom path to HDF5'),
+ ('hdf5-version=', '5', 'HDF5 version "X.Y.Z"'),
+ ('mpi', 'm', 'Enable MPI building'),
+ ('reset', 'r', 'Reset config options') ]
+
+ def initialize_options(self):
+ self.hdf5 = None
+ self.hdf5_version = None
+ self.mpi = None
+ self.reset = None
+
+ def finalize_options(self):
+ if self.hdf5_version is not None:
+ validate_version(self.hdf5_version)
+
+ def reset_rebuild(self):
+ """ Mark this configuration as built """
+ dct = loadpickle()
+ dct['rebuild'] = False
+ savepickle(dct)
+
+ def run(self):
+ """ Distutils calls this when the command is run """
+
+ env = EnvironmentOptions()
+
+ # Step 1: determine if settings have changed and update cache
+
+ oldsettings = {} if self.reset else loadpickle()
+ dct = oldsettings.copy()
+
+ # Only update settings which have actually been specified this
+ # round; ignore the others (which have value None).
+ if self.hdf5 is not None:
+ dct['cmd_hdf5'] = self.hdf5
+ if env.hdf5 is not None:
+ dct['env_hdf5'] = env.hdf5
+ if self.hdf5_version is not None:
+ dct['cmd_hdf5_version'] = self.hdf5_version
+ if env.hdf5_version is not None:
+ dct['env_hdf5_version'] = env.hdf5_version
+ if self.mpi is not None:
+ dct['cmd_mpi'] = self.mpi
+
+ self.rebuild_required = dct.get('rebuild') or dct != oldsettings
+
+ # Corner case: rebuild if options reset, but only if they previously
+ # had non-default values (to handle multiple resets in a row)
+ if self.reset and any(loadpickle().values()):
+ self.rebuild_required = True
+
+ dct['rebuild'] = self.rebuild_required
+
+ savepickle(dct)
+
+ # Step 2: update public config attributes according to priority rules
+
+ if self.hdf5 is None:
+ self.hdf5 = oldsettings.get('cmd_hdf5')
+ if self.hdf5 is None:
+ self.hdf5 = env.hdf5
+ if self.hdf5 is None:
+ self.hdf5 = oldsettings.get('env_hdf5')
+
+ if self.hdf5_version is None:
+ self.hdf5_version = oldsettings.get('cmd_hdf5_version')
+ if self.hdf5_version is None:
+ self.hdf5_version = env.hdf5_version
+ if self.hdf5_version is None:
+ self.hdf5_version = oldsettings.get('env_hdf5_version')
+ if self.hdf5_version is None:
+ try:
+ self.hdf5_version = autodetect_version(self.hdf5)
+ print("Autodetected HDF5 %s" % self.hdf5_version)
+ except Exception as e:
+ sys.stderr.write("Autodetection skipped [%s]\n" % e)
+ self.hdf5_version = '1.8.4'
+
+ if self.mpi is None:
+ self.mpi = oldsettings.get('cmd_mpi')
+
+ # Step 3: print the resulting configuration to stdout
+
+ print('*' * 80)
+ print(' ' * 23 + "Summary of the h5py configuration")
+ print('')
+ print(" Path to HDF5: " + repr(self.hdf5))
+ print(" HDF5 Version: " + repr(self.hdf5_version))
+ print(" MPI Enabled: " + repr(bool(self.mpi)))
+ print("Rebuild Required: " + repr(bool(self.rebuild_required)))
+ print('')
+ print('*' * 80)
+
+
+def autodetect_version(hdf5_dir=None):
+ """
+ Detect the current version of HDF5, and return X.Y.Z version string.
+
+ Intended for Unix-ish platforms (Linux, OS X, BSD).
+ Does not support Windows. Raises an exception if anything goes wrong.
+
+ hdf5_dir: optional HDF5 install directory to look in (containing "lib")
+ """
+
+ import os
+ import sys
+ import os.path as op
+ import re
+ import ctypes
+ from ctypes import byref
+
+ if sys.platform.startswith('darwin'):
+ regexp = re.compile(r'^libhdf5.dylib')
+ else:
+ regexp = re.compile(r'^libhdf5.so')
+
+ libdirs = ['/usr/local/lib', '/opt/local/lib']
+ if hdf5_dir is not None:
+ libdirs.insert(0, op.join(hdf5_dir, 'lib'))
+
+ path = None
+ for d in libdirs:
+ try:
+ candidates = [x for x in os.listdir(d) if regexp.match(x)]
+ except Exception:
+ continue # Skip invalid entries
+
+ if len(candidates) != 0:
+ candidates.sort(key=lambda x: len(x)) # Prefer libfoo.so to libfoo.so.X.Y.Z
+ path = op.abspath(op.join(d, candidates[0]))
+ break
+
+ if path is None:
+ path = "libhdf5.so"
+
+ lib = ctypes.cdll.LoadLibrary(path)
+
+ major = ctypes.c_uint()
+ minor = ctypes.c_uint()
+ release = ctypes.c_uint()
+
+ lib.H5get_libversion(byref(major), byref(minor), byref(release))
+
+ return "{0}.{1}.{2}".format(int(major.value), int(minor.value), int(release.value))
diff --git a/windows/README.txt b/windows/README.txt
new file mode 100644
index 0000000..1f9cad4
--- /dev/null
+++ b/windows/README.txt
@@ -0,0 +1,23 @@
+Build instructions for h5py on Windows:
+
+Build h5py in the normal fashion, except you are required to provide
+both the --hdf5 and --hdf5-version arguments to setup.py.
+
+Build HDF5 for distribution with a single command, using the pavement
+file in this directory. You will need to install paver first.
+
+CMake 2.8 (NOT 3.0 or higher), and a SVN client, must be installed and
+on the path.
+
+To build HDF5 with Visual Studio 2008 (required for Python 2.6, 2.7 and 3.2):
+
+ paver build_2008
+
+To build with Visual Studio 2010 (required for Python 3.3):
+
+ paver build_2010
+
+These commands will each produce a zip file containing the appropriate
+build of HDF5. Unpack them and supply the appropriate directory to --hdf5.
+
+Check pavement.py for the current HDF5 version to pass to --hdf5-version.
\ No newline at end of file
diff --git a/windows/cacheinit.cmake b/windows/cacheinit.cmake
new file mode 100644
index 0000000..b1116ac
--- /dev/null
+++ b/windows/cacheinit.cmake
@@ -0,0 +1,79 @@
+# This is the official h5py CMakeCache file.
+# Please see README.txt in the "windows" directory of the h5py package for more info.
+
+########################
+# EXTERNAL cache entries
+########################
+
+SET (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries" FORCE)
+
+SET (BUILD_TESTING ON CACHE BOOL "Build HDF5 Unit Testing" FORCE)
+
+SET (HDF_PACKAGE_EXT "" CACHE STRING "Name of HDF package extension" FORCE)
+
+SET (HDF5_EXTERNAL_LIB_PREFIX "h5py_" CACHE STRING "docstring" FORCE)
+
+SET (HDF5_BUILD_CPP_LIB OFF CACHE BOOL "Build HDF5 C++ Library" FORCE)
+
+SET (HDF5_BUILD_EXAMPLES OFF CACHE BOOL "Build HDF5 Library Examples" FORCE)
+
+SET (HDF5_BUILD_FORTRAN OFF CACHE BOOL "Build FORTRAN support" FORCE)
+
+SET (HDF5_ENABLE_F2003 OFF CACHE BOOL "Enable FORTRAN 2003 Standard" FORCE)
+
+SET (HDF5_BUILD_HL_LIB ON CACHE BOOL "Build HIGH Level HDF5 Library" FORCE)
+
+SET (HDF5_BUILD_TOOLS ON CACHE BOOL "Build HDF5 Tools" FORCE)
+
+SET (HDF5_BUILD_GENERATORS OFF CACHE BOOL "Build Test Generators" FORCE)
+
+SET (HDF5_ENABLE_Z_LIB_SUPPORT ON CACHE BOOL "Enable Zlib Filters" FORCE)
+
+SET (HDF5_ENABLE_SZIP_SUPPORT ON CACHE BOOL "Use SZip Filter" FORCE)
+
+SET (HDF5_ENABLE_SZIP_ENCODING OFF CACHE BOOL "Use SZip Encoding" FORCE)
+
+SET (HDF5_ENABLE_HSIZET ON CACHE BOOL "Enable datasets larger than memory" FORCE)
+
+SET (HDF5_ENABLE_UNSUPPORTED OFF CACHE BOOL "Enable unsupported combinations of configuration options" FORCE)
+
+SET (HDF5_ENABLE_DEPRECATED_SYMBOLS ON CACHE BOOL "Enable deprecated public API symbols" FORCE)
+
+SET (HDF5_ENABLE_DIRECT_VFD OFF CACHE BOOL "Build the Direct I/O Virtual File Driver" FORCE)
+
+SET (HDF5_ENABLE_PARALLEL OFF CACHE BOOL "Enable parallel build (requires MPI)" FORCE)
+
+SET (MPIEXEC_MAX_NUMPROCS "3" CACHE STRING "Minimum number of processes for HDF parallel tests" FORCE)
+
+SET (HDF5_BUILD_PARALLEL_ALL OFF CACHE BOOL "Build Parallel Programs" FORCE)
+
+SET (HDF5_ENABLE_COVERAGE OFF CACHE BOOL "Enable code coverage for Libraries and Programs" FORCE)
+
+SET (HDF5_ENABLE_USING_MEMCHECKER OFF CACHE BOOL "Indicate that a memory checker is used" FORCE)
+
+SET (HDF5_DISABLE_COMPILER_WARNINGS OFF CACHE BOOL "Disable compiler warnings" FORCE)
+
+SET (HDF5_USE_FOLDERS ON CACHE BOOL "Enable folder grouping of projects in IDEs." FORCE)
+
+SET (HDF5_USE_16_API_DEFAULT OFF CACHE BOOL "Use the HDF5 1.6.x API by default" FORCE)
+
+SET (HDF5_ENABLE_THREADSAFE OFF CACHE BOOL "(WINDOWS)Enable Threadsafety" FORCE)
+
+SET (HDF5_PACKAGE_EXTLIBS ON CACHE BOOL "(WINDOWS)CPACK - include external libraries" FORCE)
+
+SET (HDF5_NO_PACKAGES OFF CACHE BOOL "CPACK - Disable packaging" FORCE)
+
+SET (HDF5_ALLOW_EXTERNAL_SUPPORT "SVN" CACHE STRING "Allow External Library Building (NO SVN TGZ)" FORCE)
+SET_PROPERTY(CACHE HDF5_ALLOW_EXTERNAL_SUPPORT PROPERTY STRINGS NO SVN TGZ)
+
+SET (ZLIB_SVN_URL "http://svn.hdfgroup.uiuc.edu/zlib/trunk" CACHE STRING "Use ZLib from HDF repository" FORCE)
+
+SET (SZIP_SVN_URL "http://svn.hdfgroup.uiuc.edu/szip/trunk" CACHE STRING "Use SZip from HDF repository" FORCE)
+
+SET (ZLIB_TGZ_NAME "ZLib.tar.gz" CACHE STRING "Use ZLib from compressed file" FORCE)
+
+SET (SZIP_TGZ_NAME "SZip.tar.gz" CACHE STRING "Use SZip from compressed file" FORCE)
+
+SET (ZLIB_PACKAGE_NAME "zlib" CACHE STRING "Name of ZLIB package" FORCE)
+
+SET (SZIP_PACKAGE_NAME "szip" CACHE STRING "Name of SZIP package" FORCE)
diff --git a/windows/pavement.py b/windows/pavement.py
new file mode 100644
index 0000000..b85150b
--- /dev/null
+++ b/windows/pavement.py
@@ -0,0 +1,86 @@
+import shutil, zipfile, tempfile, glob, urllib
+import os
+import os.path as op
+
+from paver.easy import *
+from paver.path import pushd
+
+# Directory containing pavement.py
+ROOTPATH = op.dirname(op.abspath(__file__))
+
+def archive(fname):
+ """ Currently just copies a single file to the current directory """
+ print "Archiving %s" % str(fname)
+ if op.exists(op.join(ROOTPATH, fname)):
+ os.remove(op.join(ROOTPATH, fname))
+ shutil.copy(fname, ROOTPATH)
+
+
+# --- Tasks to download and build HDF5 ----------------------------------------
+
+CACHENAME = op.join(ROOTPATH, "cacheinit.cmake")
+
+ZIPDIR = "HDF5-1.8.13"
+ZIPFILE_NAME = "hdf5-1.8.13.zip"
+ZIPFILE_URL = "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.13/src/hdf5-1.8.13.zip"
+
+def build(vs_version):
+ """ Build HDF5.
+
+ Intended to be called with os.cwd inside the root of the HDF5 checkout.
+ This means a place containing a directory called "src".
+
+ vs_version: Integer giving Visual Studio version (2008 or 2010).
+ """
+ build_dir = {2008: "build_2008", 2010: "build_2010"}[vs_version]
+ vs_name = {2008: "Visual Studio 9 2008", 2010: "Visual Studio 10"}[vs_version]
+
+ if not op.exists(build_dir):
+ os.mkdir(build_dir)
+
+ os.chdir(build_dir)
+
+ sh('cmake -C "{}" -G "{}" ..'.format(CACHENAME, vs_name))
+ sh('cmake --build . --config Release', ignore_error=True)
+ sh('copy bin\Release\* bin /Y')
+ sh('cmake --build . --config Release')
+ sh('cpack -G ZIP')
+
+ fname = glob.glob("HDF5-*.zip")[0]
+ new_fname = 'hdf5-h5py-vs%d.zip' % vs_version
+ if op.exists(new_fname):
+ os.remove(new_fname)
+ os.rename(fname, new_fname)
+
+ archive(new_fname)
+
+
+def check_zip():
+ if not op.exists(ZIPFILE_NAME):
+ print "Downloading HDF5 source code..."
+ urllib.urlretrieve(ZIPFILE_URL, ZIPFILE_NAME)
+ try:
+ sh('cmake --version')
+ except Exception:
+ raise ValueError("CMake must be installed to build HDF5")
+
+ at task
+def build_2008():
+ """ Build HDF5 using Visual Studio 2008 """
+ check_zip()
+ if not op.exists(ZIPDIR):
+ with zipfile.ZipFile(ZIPFILE_NAME) as z:
+ z.extractall('.')
+ with pushd(ZIPDIR):
+ build(2008)
+
+ at task
+def build_2010():
+ """ Build HDF5 using Visual Studio 2010 """
+ check_zip()
+ if not op.exists(ZIPDIR):
+ with zipfile.ZipFile(ZIPFILE_NAME) as z:
+ z.extractall('.')
+ with pushd(ZIPDIR):
+ build(2010)
+
diff --git a/win_include/stdint.h b/windows/stdint.h
similarity index 100%
rename from win_include/stdint.h
rename to windows/stdint.h
diff --git a/win_include/unistd.h b/windows/unistd.h
similarity index 100%
rename from win_include/unistd.h
rename to windows/unistd.h
--
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