[getfem] branch master updated (e3d08fc -> 938ce19)
Anton Gladky
gladk at moszumanska.debian.org
Sun Apr 17 09:05:14 UTC 2016
This is an automated email from the git hooks/post-receive script.
gladk pushed a change to branch master
in repository getfem.
from e3d08fc NMU
new c0a2989 Remove +dfsg-prefix, tarball was cleaned by upstream.
adds 01f93d9 Imported Upstream version 5.0
new d911746 Merge tag 'upstream/5.0'
new 9d60233 Clean some outdated files in debian/
new 7c602ec Refresh patches.
new b5d9c68 Update autopkgtest.
new c7818ad Disable scilab.
new d9d1d36 Update getfem version to version 5.
new e6444b7 Apply cme fix dpkg.
new a5c700b Disable one more failing on powerpc test.
new f767826 Fix typo in d/changelog.
new 9e068b4 Fix autotest name.
new 938ce19 Update changelog.
The 12 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
AUTHORS | 19 +-
BUGS | 7 -
COPYING | 2 +-
INSTALL | 4 +-
Makefile.am | 5 +-
Makefile.in | 7 +-
bin/Makefile.am | 2 +-
bin/Makefile.in | 3 +-
bin/ansys2getfem_mesh | 192 +
bin/createmp | 6 +-
bin/extract_doc | 88 +-
bin/fig2eps | 76 +
bin/mesh_matlab_to_getfem | 62 +
bin/split_cmdref | 91 +
config.guess | 192 +-
config.h.in | 9 -
config.sub | 30 +-
configure | 276 +-
configure.ac | 152 +-
contrib/Makefile.am | 8 +-
contrib/Makefile.in | 9 +-
contrib/aposteriori/Makefile.in | 1 -
contrib/aposteriori/aposteriori.cc | 63 +-
contrib/aposteriori/aposteriori.param | 2 +-
contrib/aposteriori/aposteriori.pl | 6 +-
contrib/aposteriori/aposteriori_laplacian.cc | 54 +-
contrib/aposteriori/aposteriori_laplacian.pl | 6 +-
contrib/bimat_contact_crack_test/Makefile.am | 19 -
contrib/bimat_contact_crack_test/Makefile.in | 1036 ----
.../bimaterial_crack_test.cc | 650 ---
.../bimaterial_crack_test.param | 93 -
.../bimaterial_crack_test.pl | 16 -
contrib/bimaterial_crack_test/Makefile.am | 5 +-
contrib/bimaterial_crack_test/Makefile.in | 12 +-
.../bimaterial_crack_test/bimaterial_crack_test.cc | 320 +-
.../bimaterial_crack_test.param | 1 -
.../bimaterial_crack_test/bimaterial_crack_test.pl | 6 +-
contrib/bimaterial_crack_test/crack.cc | 169 +-
contrib/bimaterial_crack_test/crack.pl | 6 +-
.../bimaterial_crack_test/crack_exact_solution.cc | 41 +-
.../bimaterial_crack_test/crack_exact_solution.h | 18 +-
.../bimaterial_crack_test}/getfem_Xfem.cc | 16 +-
.../bimaterial_crack_test}/getfem_Xfem.h | 20 +-
.../bimaterial_crack_test}/getfem_spider_fem.h | 20 +-
contrib/contact_grd_trans/Makefile.am | 22 -
contrib/contact_grd_trans/Makefile.in | 1065 ----
contrib/contact_grd_trans/contact.cc | 623 --
contrib/contact_grd_trans/contact.param | 74 -
contrib/contact_grd_trans/contact.pl | 16 -
.../contact_grd_trans/contact_continuation_load.cc | 1444 -----
.../contact_grd_trans/contact_continuation_time.cc | 1284 -----
contrib/crack_plate/Makefile.am | 4 +-
contrib/crack_plate/Makefile.in | 24 +-
contrib/crack_plate/crack_bilaplacian.cc | 16 +-
contrib/crack_plate/crack_bilaplacian.h | 23 +-
contrib/crack_plate/crack_bilaplacian.param | 1 -
contrib/crack_plate/crack_bilaplacian_moment.cc | 92 +-
contrib/crack_plate/crack_bilaplacian_problem.cc | 181 +-
contrib/crack_plate/crack_bilaplacian_sif.cc | 14 +-
.../crack_plate/crack_bilaplacian_singularities.cc | 14 +-
contrib/crack_plate/crack_bilaplacian_tools.cc | 20 +-
contrib/crack_plate/crack_mindlin.cc | 162 +-
contrib/crack_plate/crack_mindlin.param | 6 +-
contrib/crack_plate/crack_mindlin.pl | 6 +-
contrib/crack_plate/mortar_bilaplacian.cc | 206 -
contrib/crack_plate/mortar_bilaplacian.h | 882 ---
contrib/crack_plate/mortar_bilaplacian.param | 66 -
contrib/delaminated_crack/Makefile.in | 1 -
contrib/delaminated_crack/delaminated_crack.cc | 33 +-
contrib/delaminated_crack/delaminated_crack.pl | 6 +-
contrib/icare/Makefile.in | 1 -
contrib/icare/icare.cc | 487 +-
contrib/icare/icare.h | 170 +-
contrib/icare/icare.pl | 6 +-
contrib/inter_element_test/Makefile.in | 1 -
contrib/inter_element_test/inter_element.cc | 17 +-
contrib/inter_element_test/inter_element.pl | 6 +-
contrib/level_set_contact/Makefile.in | 1 -
contrib/level_set_contact/contact_problem.cpp | 254 +-
contrib/level_set_contact/contact_problem.h | 83 +-
contrib/level_set_contact/contact_problem.pl | 6 +-
contrib/level_set_contact/test_contact.cpp | 364 +-
contrib/mixed_dynamic_friction/Makefile.am | 20 -
contrib/mixed_dynamic_friction/Makefile.in | 1053 ----
.../mixed_dynamic_friction.cc | 648 ---
.../mixed_dynamic_friction.param | 78 -
.../mixed_dynamic_friction.pl | 16 -
.../mixed_scalar_hyperbolic.cc | 587 --
.../mixed_scalar_hyperbolic.net | 779 ---
.../mixed_scalar_hyperbolic.param | 57 -
contrib/mixed_elastostatic/Makefile.in | 1 -
contrib/mixed_elastostatic/mixed_elastostatic.cc | 32 +-
contrib/mixed_elastostatic/mixed_elastostatic.pl | 6 +-
contrib/static_contact_gears/Makefile.am | 10 +-
contrib/static_contact_gears/Makefile.in | 32 +-
.../static_contact_gears/static_contact_gears.cc | 52 +-
.../static_contact_gears.param | 4 +-
.../static_contact_gears/static_contact_gears.pl | 51 +-
.../static_contact_gears_2teeth.param | 4 +-
.../static_contact_gears_u1_u2.cc | 64 +-
contrib/static_friction/Makefile.am | 19 -
contrib/static_friction/Makefile.in | 1036 ----
contrib/static_friction/static_friction.cc | 1013 ----
contrib/static_friction/static_friction.param | 100 -
contrib/static_friction/static_friction.pl | 101 -
contrib/xfem_contact/Makefile.in | 1 -
contrib/xfem_contact/xfem_contact.cc | 66 +-
contrib/xfem_contact/xfem_contact.pl | 6 +-
contrib/xfem_contact/xfem_dirichlet.cc | 79 +-
contrib/xfem_contact/xfem_stokes.cc | 67 +-
contrib/xfem_contact/xfem_stokes.param | 150 +-
contrib/xfem_large_strain/Makefile.am | 25 -
contrib/xfem_large_strain/Makefile.in | 1101 ----
.../compressible_getfem_nonlinear_elastoptim.h | 863 ---
.../getfem_nonlinear_elastoptim.h | 1844 ------
contrib/xfem_large_strain/linear_incomp_xfem.cc | 1015 ----
contrib/xfem_large_strain/nonlinear_incomp_xfem.cc | 1402 -----
.../xfem_large_strain/nonlinear_incomp_xfem.param | 163 -
contrib/xfem_large_strain/vertex_large_strain.cc | 2131 -------
.../xfem_large_strain/vertex_large_strain.param | 184 -
contrib/xfem_large_strain/xfem_large_strain.cc | 1490 -----
contrib/xfem_large_strain/xfem_large_strain.param | 165 -
contrib/xfem_large_strain/xfem_large_strain.pl | 16 -
contrib/xfem_stab_unilat_contact/Makefile.in | 1 -
.../xfem_stab_unilat_contact.cc | 24 +-
.../xfem_stab_unilat_contact.pl | 6 +-
cubature/Makefile.in | 1 -
cubature/getfem_im_list.h | 6048 +++++++++----------
cubature/make_getfem_im_list | 4 +-
debian/README.source | 58 -
debian/TODO | 5 -
debian/changelog | 18 +-
debian/control | 144 +-
debian/docs | 1 -
debian/libgetfem++-dev.install | 1 -
debian/libgetfem4++v5.install | 1 -
debian/libgetfem5++.install | 1 +
debian/patches/02_addgetfempath.diff | 6 +-
debian/patches/03_disableXaccess.diff | 10 +-
debian/patches/04_fix_FTBFS.patch | 22 +-
debian/patches/05_disable_failing_test.patch | 53 +
debian/patches/series | 1 +
debian/rules | 32 +-
debian/scilab-getfem++.install | 1 -
debian/tests/checkGlobalFunctions.py | 45 +-
.../tests/checkLevelset.py | 8 +-
debian/tests/control | 2 +-
.../demo_crack.py => debian/tests/demoCrack.py | 6 +-
.../tests/demoFictitiousDomains.py | 0
debian/tests/demoMindlinReissnerPlate.py | 97 +
.../demo_plate.py => debian/tests/demoPlate.py | 80 +-
debian/watch | 2 +-
doc/Makefile.in | 1 -
doc/sphinx/Makefile.am | 14 +-
doc/sphinx/Makefile.in | 15 +-
interface/Makefile.in | 1 -
interface/src/Makefile.am | 18 +-
interface/src/Makefile.in | 75 +-
interface/src/getfem_interface.cc | 40 +-
interface/src/getfem_interface.h | 16 +-
interface/src/getfemint.cc | 147 +-
interface/src/getfemint.h | 36 +-
interface/src/getfemint_cont_struct.h | 34 +-
interface/src/getfemint_convex_structure.cc | 14 +-
interface/src/getfemint_convex_structure.h | 16 +-
interface/src/getfemint_global_function.cc | 16 +-
interface/src/getfemint_global_function.h | 18 +-
interface/src/getfemint_gsparse.cc | 14 +-
interface/src/getfemint_gsparse.h | 16 +-
interface/src/getfemint_gsparse_misc.cc | 14 +-
interface/src/getfemint_gsparse_misc.h | 16 +-
interface/src/getfemint_integ.cc | 14 +-
interface/src/getfemint_integ.h | 16 +-
interface/src/getfemint_levelset.cc | 106 +-
interface/src/getfemint_levelset.h | 19 +-
interface/src/getfemint_matelem.cc | 14 +-
interface/src/getfemint_matelem.h | 16 +-
interface/src/getfemint_matelemtype.cc | 14 +-
interface/src/getfemint_matelemtype.h | 16 +-
interface/src/getfemint_mdbrick.cc | 70 -
interface/src/getfemint_mdbrick.h | 111 -
interface/src/getfemint_mdstate.h | 97 -
interface/src/getfemint_mesh.cc | 14 +-
interface/src/getfemint_mesh.h | 16 +-
interface/src/getfemint_mesh_fem.cc | 36 +-
interface/src/getfemint_mesh_fem.h | 22 +-
interface/src/getfemint_mesh_im.cc | 14 +-
interface/src/getfemint_mesh_im.h | 16 +-
interface/src/getfemint_mesh_im_data.cc | 75 +
...tfemint_mesh_fem.h => getfemint_mesh_im_data.h} | 81 +-
interface/src/getfemint_mesh_levelset.cc | 14 +-
interface/src/getfemint_mesh_levelset.h | 16 +-
interface/src/getfemint_mesh_slice.h | 16 +-
interface/src/getfemint_mesher_object.h | 16 +-
interface/src/getfemint_misc.cc | 534 +-
interface/src/getfemint_misc.h | 16 +-
interface/src/getfemint_models.h | 18 +-
interface/src/getfemint_multi_contact_frame.h | 88 -
interface/src/getfemint_object.h | 16 +-
interface/src/getfemint_pfem.cc | 14 +-
interface/src/getfemint_pfem.h | 16 +-
interface/src/getfemint_pgt.cc | 14 +-
interface/src/getfemint_pgt.h | 16 +-
interface/src/getfemint_poly.h | 16 +-
interface/src/getfemint_precond.h | 30 +-
interface/src/getfemint_std.h | 16 +-
interface/src/getfemint_workspace.cc | 16 +-
interface/src/getfemint_workspace.h | 18 +-
interface/src/gf_asm.cc | 571 +-
interface/src/gf_compute.cc | 35 +-
interface/src/gf_cont_struct.cc | 118 +-
interface/src/gf_cont_struct_get.cc | 241 +-
interface/src/gf_cvstruct_get.cc | 54 +-
interface/src/gf_delete.cc | 14 +-
interface/src/gf_eltm.cc | 14 +-
interface/src/gf_fem.cc | 16 +-
interface/src/gf_fem_get.cc | 14 +-
interface/src/gf_geotrans.cc | 14 +-
interface/src/gf_geotrans_get.cc | 14 +-
interface/src/gf_global_function.cc | 28 +-
interface/src/gf_global_function_get.cc | 16 +-
interface/src/gf_integ.cc | 14 +-
interface/src/gf_integ_get.cc | 16 +-
interface/src/gf_levelset.cc | 23 +-
interface/src/gf_levelset_get.cc | 14 +-
interface/src/gf_levelset_set.cc | 22 +-
interface/src/gf_linsolve.cc | 80 +-
interface/src/gf_mdbrick.cc | 591 --
interface/src/gf_mdbrick_get.cc | 311 -
interface/src/gf_mdbrick_set.cc | 205 -
interface/src/gf_mdstate.cc | 81 -
interface/src/gf_mdstate_get.cc | 132 -
interface/src/gf_mdstate_set.cc | 87 -
interface/src/gf_mesh.cc | 44 +-
interface/src/gf_mesh_fem.cc | 15 +-
interface/src/gf_mesh_fem_get.cc | 16 +-
interface/src/gf_mesh_fem_set.cc | 29 +-
interface/src/gf_mesh_get.cc | 529 +-
interface/src/gf_mesh_im.cc | 15 +-
interface/src/gf_mesh_im_data.cc | 60 +
interface/src/gf_mesh_im_data_get.cc | 156 +
interface/src/gf_mesh_im_data_set.cc | 54 +
interface/src/gf_mesh_im_get.cc | 124 +-
interface/src/gf_mesh_im_set.cc | 14 +-
interface/src/gf_mesh_levelset.cc | 16 +-
interface/src/gf_mesh_levelset_get.cc | 16 +-
interface/src/gf_mesh_levelset_set.cc | 16 +-
interface/src/gf_mesh_set.cc | 57 +-
interface/src/gf_mesher_object.cc | 16 +-
interface/src/gf_mesher_object_get.cc | 14 +-
interface/src/gf_model.cc | 16 +-
interface/src/gf_model_get.cc | 166 +-
interface/src/gf_model_set.cc | 946 ++-
interface/src/gf_multi_contact_frame.cc | 97 -
interface/src/gf_multi_contact_frame_get.cc | 151 -
interface/src/gf_multi_contact_frame_set.cc | 141 -
interface/src/gf_precond.cc | 14 +-
interface/src/gf_precond_get.cc | 14 +-
interface/src/gf_slice.cc | 74 +-
interface/src/gf_slice_get.cc | 16 +-
interface/src/gf_slice_set.cc | 14 +-
interface/src/gf_spmat.cc | 14 +-
interface/src/gf_spmat_get.cc | 37 +-
interface/src/gf_spmat_set.cc | 14 +-
interface/src/gf_undelete.cc | 16 +-
interface/src/gf_util.cc | 14 +-
interface/src/gf_workspace.cc | 17 +-
interface/src/gfi_array.c | 14 +-
interface/src/gfi_array.h | 44 +-
interface/src/gfi_rpc.h | 16 +-
interface/src/gfi_rpc_clnt.c | 14 +-
interface/src/gfi_rpc_server.c | 14 +-
interface/src/gfi_rpc_svc.c | 14 +-
interface/src/gfi_rpc_xdr.c | 14 +-
interface/src/matlab/Makefile.in | 1 -
interface/src/matlab/gfm_common.c | 4 +-
interface/src/matlab/gfm_common.h | 4 +-
interface/src/matlab/gfm_mex.c | 8 +-
interface/src/matlab/gfm_rpc_mexint.c | 4 +-
interface/src/matlab/private/Makefile.in | 1 -
interface/src/python/Makefile.in | 1 -
interface/src/python/__init__.py | 6 +-
interface/src/python/getfem.py | 1720 +++---
interface/src/python/getfem_python.c | 68 +-
interface/src/scilab/Makefile.am | 10 +-
interface/src/scilab/Makefile.in | 11 +-
interface/src/scilab/builddoc.sce | 14 +-
interface/src/scilab/demos/demo_bilaplacian.sce | 133 +-
interface/src/scilab/demos/demo_continuation.sce | 70 +-
.../src/scilab/demos/demo_continuation_block.sce | 199 +-
.../src/scilab/demos/demo_continuation_vee.sce | 28 +-
interface/src/scilab/demos/demo_crack.sce | 2 +-
.../src/scilab/demos/demo_fictitious_domains.sce | 7 +-
interface/src/scilab/demos/demo_finallaplacian.sce | 83 -
interface/src/scilab/demos/demo_laplacian.sce | 10 -
interface/src/scilab/demos/demo_laplacian1D.sce | 113 -
.../src/scilab/demos/demo_mesh_generation.sce | 5 +-
.../src/scilab/demos/demo_nonlinear_elasticity.sce | 67 +-
interface/src/scilab/demos/demo_plasticity.sce | 308 +-
interface/src/scilab/demos/demo_plate.sce | 178 +-
interface/src/scilab/demos/demo_refine.sce | 17 -
interface/src/scilab/demos/demo_static_contact.sce | 9 +-
interface/src/scilab/demos/demo_step_by_step.sce | 42 +-
.../src/scilab/demos/demo_stokes_3D_tank_draw.sce | 2 +-
.../scilab/demos/demo_structural_optimization.sce | 10 +-
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.../scilab/demos/demo_topological_optimization.sce | 4 +-
interface/src/scilab/demos/demo_tripod.sce | 88 +-
interface/src/scilab/demos/demo_tripod_alt.sce | 8 +-
interface/src/scilab/demos/demo_tripod_anim.sce | 4 +-
.../src/scilab/demos/demo_tripod_slice_anim.sce | 6 +-
interface/src/scilab/demos/demo_wave2D.sce | 43 +-
interface/src/scilab/demos/demo_wave2D_alt.sce | 16 +-
interface/src/scilab/demos/demo_wave_equation.sce | 34 +-
interface/src/scilab/demos/tutorial1.sce | 2 +-
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interface/src/scilab/help/en_US/gf_compute.xml | 23 +-
interface/src/scilab/help/en_US/gf_fem_get.xml | 9 +
interface/src/scilab/help/en_US/gf_mdbrick.xml | 373 --
interface/src/scilab/help/en_US/gf_mdbrick_get.xml | 233 -
interface/src/scilab/help/en_US/gf_mdbrick_set.xml | 96 -
interface/src/scilab/help/en_US/gf_mdstate.xml | 88 -
interface/src/scilab/help/en_US/gf_mdstate_get.xml | 148 -
interface/src/scilab/help/en_US/gf_mdstate_set.xml | 94 -
interface/src/scilab/help/en_US/gf_mesh_fem.xml | 11 +-
interface/src/scilab/help/en_US/gf_mesh_im.xml | 22 +
interface/src/scilab/help/en_US/gf_mesh_im_get.xml | 4 +-
interface/src/scilab/help/en_US/gf_mesh_set.xml | 4 +-
interface/src/scilab/help/en_US/gf_model_get.xml | 107 +-
interface/src/scilab/help/en_US/gf_model_set.xml | 527 +-
interface/src/scilab/help/en_US/preliminary.xml | 6 +-
interface/src/scilab/jar/scilab_en_US_help.jar | Bin 591045 -> 618654 bytes
interface/src/scilab/macros/build_options_list.sci | 2 +-
interface/src/scilab/macros/lib | Bin 1152 -> 1156 bytes
interface/src/scilab/macros/names | 46 +-
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interface/src/scilab/macros/overload/gf_typeof.sci | 24 +-
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interface/src/scilab/macros/overload/names | 4 +-
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interface/src/scilab/sci_gateway/c/gfm_common.c | 14 +-
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interface/src/scilab/sci_gateway/c/gfm_scilab.cpp | 14 +-
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interface/src/scilab/sci_gateway/c/loader.sce | 12 +-
interface/src/scilab/sci_gateway/c/sci_cgne.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_cgs.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_gmres.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_mgcr.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_spchol.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_spcholinc.c | 14 +-
interface/src/scilab/sci_gateway/c/sci_spchsolve.c | 14 +-
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interface/tests/matlab/demo_bilaplacian.m | 160 +-
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interface/tests/matlab/demo_crack.m | 117 -
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interface/tests/matlab/demo_mesh_generation.m | 96 -
interface/tests/matlab/demo_mortar.m | 108 -
interface/tests/matlab/demo_nonlinear_elasticity.m | 10 +-
.../tests/matlab/demo_nonlinear_elasticity_anim.m | 6 +-
interface/tests/matlab/demo_periodic_laplacian.m | 6 +-
interface/tests/matlab/demo_plasticity.m | 291 +-
interface/tests/matlab/demo_refine.m | 90 -
interface/tests/matlab/demo_static_contact.m | 413 --
interface/tests/matlab/demo_stokes_3D_tank.m | 107 -
interface/tests/matlab/demo_stokes_3D_tank_draw.m | 51 -
.../tests/matlab/demo_structural_optimization.m | 420 --
.../tests/matlab/demo_topological_optimization.m | 157 -
interface/tests/matlab/demo_tripod.m | 129 -
interface/tests/matlab/demo_tripod_alt.m | 104 -
interface/tests/matlab/demo_tripod_slice_anim.m | 46 -
interface/tests/matlab/demo_wave2D.m | 196 -
interface/tests/matlab/demo_wave2D_alt.m | 161 -
interface/tests/matlab/demo_wave_equation.m | 83 -
interface/tests/matlab/private/Makefile.in | 1 -
interface/tests/matlab/private/asserterr.m | 6 +-
interface/tests/matlab/private/gfassert.m | 6 +-
interface/tests/matlab/test_argyris.m | 97 -
interface/tests/matlab/test_plasticity_new_brick.m | 173 -
interface/tests/matlab/tripod_anim.m | 51 -
interface/tests/matlab/tutorial1.m | 45 -
interface/tests/meshes/Makefile.in | 1 -
interface/tests/python/Makefile.am | 48 +-
interface/tests/python/Makefile.in | 45 +-
interface/tests/python/check_global_functions.py | 45 +-
interface/tests/python/check_levelset.py | 8 +-
.../tests/python/demo_Mindlin_Reissner_plate.py | 97 +
interface/tests/python/demo_crack.py | 6 +-
interface/tests/python/demo_plasticity.py | 71 +-
interface/tests/python/demo_plate.py | 80 +-
interface/tests/python/demo_step_by_step.py | 2 +-
interface/tests/python/demo_stokes_3D_tank.py | 6 +-
interface/tests/python/demo_stokes_3D_tank_draw.py | 2 +-
.../demo_thermo_elasticity_electrical_coupling.py | 231 +
interface/tests/python/demo_tripod.py | 119 +-
interface/tests/python/demo_wave_equation.py | 105 +
interface/tests/python/demo_wheel_contact.py | 168 +
interface/tests/python/getfem_tvtk.py | 4 +-
ltmain.sh | 4 +-
m4/Makefile.in | 1 -
src/Makefile.am | 18 +-
src/Makefile.in | 54 +-
src/bgeot_convex_ref.cc | 14 +-
src/bgeot_convex_ref_simplexified.cc | 14 +-
src/bgeot_convex_structure.cc | 14 +-
src/bgeot_ftool.cc | 14 +-
src/bgeot_geometric_trans.cc | 16 +-
src/bgeot_geotrans_inv.cc | 20 +-
src/bgeot_imbricated_box.cc | 231 -
src/bgeot_kdtree.cc | 14 +-
src/bgeot_mesh_structure.cc | 301 +-
src/bgeot_node_tab.cc | 18 +-
src/bgeot_poly.cc | 16 +-
src/bgeot_poly_composite.cc | 69 +-
src/bgeot_rtree.cc | 14 +-
src/bgeot_small_vector.cc | 14 +-
src/bgeot_sparse_tensors.cc | 14 +-
src/dal_backtrace.cc | 14 +-
src/dal_bit_vector.cc | 26 +-
src/dal_singleton.cc | 28 +-
src/dal_static_stored_objects.cc | 49 +-
src/getfem/bgeot_comma_init.h | 16 +-
src/getfem/bgeot_config.h | 20 +-
src/getfem/bgeot_convex.h | 16 +-
src/getfem/bgeot_convex_ref.h | 16 +-
src/getfem/bgeot_convex_structure.h | 16 +-
src/getfem/bgeot_ftool.h | 16 +-
src/getfem/bgeot_geometric_trans.h | 18 +-
src/getfem/bgeot_geotrans_inv.h | 18 +-
src/getfem/bgeot_imbricated_box.h | 63 -
src/getfem/bgeot_kdtree.h | 18 +-
src/getfem/bgeot_mesh.h | 16 +-
src/getfem/bgeot_mesh_structure.h | 108 +-
src/getfem/bgeot_node_tab.h | 18 +-
src/getfem/bgeot_permutations.h | 16 +-
src/getfem/bgeot_poly.h | 20 +-
src/getfem/bgeot_poly_composite.h | 36 +-
src/getfem/bgeot_rtree.h | 18 +-
src/getfem/bgeot_small_vector.h | 38 +-
src/getfem/bgeot_sparse_tensors.h | 16 +-
src/getfem/bgeot_tensor.h | 311 +-
src/getfem/bgeot_vector.h | 72 -
src/getfem/dal_backtrace.h | 16 +-
src/getfem/dal_basic.h | 16 +-
src/getfem/dal_bit_vector.h | 117 +-
src/getfem/dal_config.h | 16 +-
src/getfem/dal_naming_system.h | 16 +-
src/getfem/dal_shared_ptr.h | 16 +-
src/getfem/dal_singleton.h | 50 +-
src/getfem/dal_static_stored_objects.h | 50 +-
src/getfem/dal_tas.h | 16 +-
src/getfem/dal_tree_sorted.h | 16 +-
src/getfem/getfem_Coulomb_friction.h | 438 --
src/getfem/getfem_Navier_Stokes.h | 109 +-
src/getfem/getfem_arch_config.h | 19 +-
src/getfem/getfem_assembling.h | 16 +-
src/getfem/getfem_assembling_tensors.h | 16 +-
src/getfem/getfem_config.h | 47 +-
src/getfem/getfem_contact_and_friction_common.h | 28 +-
src/getfem/getfem_contact_and_friction_integral.h | 83 +-
.../getfem_contact_and_friction_large_sliding.h | 18 +-
src/getfem/getfem_contact_and_friction_nodal.h | 22 +-
src/getfem/getfem_context.h | 18 +-
src/getfem/getfem_continuation.h | 1855 +++---
src/getfem/getfem_convect.h | 18 +-
src/getfem/getfem_crack_sif.h | 16 +-
src/getfem/getfem_deformable_mesh.h | 316 +-
src/getfem/getfem_derivatives.h | 21 +-
src/getfem/getfem_error_estimate.h | 17 +-
src/getfem/getfem_export.h | 27 +-
src/getfem/getfem_external_data_fem.h | 85 -
src/getfem/getfem_fem.h | 138 +-
src/getfem/getfem_fem_level_set.h | 16 +-
src/getfem/getfem_fourth_order.h | 414 +-
src/getfem/getfem_gauss_lobatto_fem_coef.h | 744 ---
src/getfem/getfem_generic_assembly.h | 296 +-
src/getfem/getfem_im_data.h | 724 +--
src/getfem/getfem_im_list.h | 6055 ++++++++++----------
src/getfem/getfem_import.h | 54 +-
src/getfem/getfem_integration.h | 16 +-
src/getfem/getfem_inter_element.h | 16 +-
src/getfem/getfem_interpolated_fem.h | 16 +-
src/getfem/getfem_interpolation.h | 32 +-
src/getfem/getfem_level_set.h | 16 +-
src/getfem/getfem_level_set_contact.h | 1621 +++---
src/getfem/getfem_linearized_plates.h | 1191 +---
src/getfem/getfem_mat_elem.h | 18 +-
src/getfem/getfem_mat_elem_type.h | 16 +-
src/getfem/getfem_mesh.h | 219 +-
src/getfem/getfem_mesh_fem.h | 25 +-
src/getfem/getfem_mesh_fem_global_function.h | 33 +-
src/getfem/getfem_mesh_fem_level_set.h | 16 +-
src/getfem/getfem_mesh_fem_product.h | 16 +-
src/getfem/getfem_mesh_fem_sum.h | 16 +-
src/getfem/getfem_mesh_im.h | 83 +-
src/getfem/getfem_mesh_im_level_set.h | 16 +-
src/getfem/getfem_mesh_level_set.h | 16 +-
src/getfem/getfem_mesh_region.h | 87 +-
src/getfem/getfem_mesh_slice.h | 112 +-
src/getfem/getfem_mesh_slicers.h | 102 +-
src/getfem/getfem_mesher.h | 20 +-
src/getfem/getfem_model_solvers.h | 591 +-
src/getfem/getfem_modeling.h | 2477 --------
src/getfem/getfem_models.h | 1143 ++--
src/getfem/getfem_nonlinear_elasticity.h | 283 +-
src/getfem/getfem_norm.h | 192 -
src/getfem/getfem_omp.h | 707 +--
src/getfem/getfem_partial_mesh_fem.h | 19 +-
src/getfem/getfem_plasticity.h | 587 +-
src/getfem/getfem_projected_fem.h | 16 +-
src/getfem/getfem_regular_meshes.h | 38 +-
src/getfem/getfem_superlu.h | 16 +-
src/getfem/getfem_torus.h | 281 +-
src/getfem_assembling_tensors.cc | 32 +-
src/getfem_boost/noncopyable.hpp | 9 +-
src/getfem_contact_and_friction_common.cc | 166 +-
src/getfem_contact_and_friction_integral.cc | 2252 +-------
src/getfem_contact_and_friction_large_sliding.cc | 282 +-
src/getfem_contact_and_friction_nodal.cc | 128 +-
src/getfem_context.cc | 23 +-
src/getfem_continuation.cc | 141 +
src/getfem_deformable_mesh.cc | 42 -
src/getfem_error_estimate.cc | 225 +-
src/getfem_export.cc | 14 +-
src/getfem_fem.cc | 1163 +++-
src/getfem_fem_composite.cc | 14 +-
src/getfem_fem_level_set.cc | 18 +-
src/getfem_fourth_order.cc | 63 +-
src/getfem_generic_assembly.cc | 5027 ++++++++++------
src/getfem_im_data.cc | 420 +-
src/getfem_import.cc | 536 +-
src/getfem_integration.cc | 14 +-
src/getfem_integration_composite.cc | 14 +-
src/getfem_inter_element.cc | 120 +-
src/getfem_interpolated_fem.cc | 306 +-
src/getfem_interpolation.cc | 14 +-
src/getfem_level_set.cc | 14 +-
src/getfem_level_set_contact.cc | 1635 +++---
src/getfem_linearized_plates.cc | 306 +
src/getfem_mat_elem.cc | 33 +-
src/getfem_mat_elem_type.cc | 6 +-
src/getfem_mesh.cc | 649 ++-
src/getfem_mesh_fem.cc | 21 +-
src/getfem_mesh_fem_global_function.cc | 201 +-
src/getfem_mesh_fem_level_set.cc | 14 +-
src/getfem_mesh_fem_product.cc | 14 +-
src/getfem_mesh_fem_sum.cc | 204 +-
src/getfem_mesh_im.cc | 16 +-
src/getfem_mesh_im_level_set.cc | 14 +-
src/getfem_mesh_level_set.cc | 18 +-
src/getfem_mesh_region.cc | 86 +-
src/getfem_mesh_slice.cc | 14 +-
src/getfem_mesh_slicers.cc | 452 +-
src/getfem_mesher.cc | 17 +-
src/getfem_model_solvers.cc | 125 +-
src/getfem_modeling.cc | 99 -
src/getfem_models.cc | 5285 +++++++++--------
src/getfem_nonlinear_elasticity.cc | 100 +-
src/getfem_omp.cc | 259 +-
src/getfem_partial_mesh_fem.cc | 30 +-
src/getfem_plasticity.cc | 400 +-
src/getfem_projected_fem.cc | 9 +-
src/getfem_regular_meshes.cc | 349 +-
src/getfem_superlu.cc | 14 +-
src/getfem_torus.cc | 850 +--
src/gmm/gmm.h | 16 +-
src/gmm/gmm_MUMPS_interface.h | 154 +-
src/gmm/gmm_algobase.h | 16 +-
src/gmm/gmm_blas.h | 47 +-
src/gmm/gmm_blas_interface.h | 16 +-
src/gmm/gmm_condition_number.h | 16 +-
src/gmm/gmm_conjugated.h | 16 +-
src/gmm/gmm_def.h | 16 +-
src/gmm/gmm_dense_Householder.h | 90 +-
src/gmm/gmm_dense_lu.h | 16 +-
src/gmm/gmm_dense_matrix_functions.h | 302 +
src/gmm/gmm_dense_qr.h | 352 +-
src/gmm/gmm_dense_sylvester.h | 16 +-
src/gmm/gmm_domain_decomp.h | 16 +-
src/gmm/gmm_except.h | 33 +-
src/gmm/gmm_inoutput.h | 16 +-
src/gmm/gmm_interface.h | 16 +-
src/gmm/gmm_interface_bgeot.h | 16 +-
src/gmm/gmm_iter.h | 41 +-
src/gmm/gmm_iter_solvers.h | 16 +-
src/gmm/gmm_kernel.h | 16 +-
src/gmm/gmm_lapack_interface.h | 296 +-
src/gmm/gmm_least_squares_cg.h | 16 +-
src/gmm/gmm_matrix.h | 16 +-
src/gmm/gmm_modified_gram_schmidt.h | 16 +-
src/gmm/gmm_opt.h | 16 +-
src/gmm/gmm_precond.h | 16 +-
src/gmm/gmm_precond_diagonal.h | 16 +-
src/gmm/gmm_precond_ildlt.h | 16 +-
src/gmm/gmm_precond_ildltt.h | 16 +-
src/gmm/gmm_precond_ilu.h | 16 +-
src/gmm/gmm_precond_ilut.h | 16 +-
src/gmm/gmm_precond_ilutp.h | 16 +-
src/gmm/gmm_precond_mr_approx_inverse.h | 16 +-
src/gmm/gmm_range_basis.h | 19 +-
src/gmm/gmm_real_part.h | 16 +-
src/gmm/gmm_ref.h | 16 +-
src/gmm/gmm_scaled.h | 16 +-
src/gmm/gmm_solver_Schwarz_additive.h | 16 +-
src/gmm/gmm_solver_bfgs.h | 16 +-
src/gmm/gmm_solver_bicgstab.h | 16 +-
src/gmm/gmm_solver_cg.h | 16 +-
src/gmm/gmm_solver_constrained_cg.h | 16 +-
src/gmm/gmm_solver_gmres.h | 16 +-
src/gmm/gmm_solver_idgmres.h | 16 +-
src/gmm/gmm_solver_qmr.h | 16 +-
src/gmm/gmm_std.h | 50 +-
src/gmm/gmm_sub_index.h | 16 +-
src/gmm/gmm_sub_matrix.h | 16 +-
src/gmm/gmm_sub_vector.h | 22 +-
src/gmm/gmm_superlu_interface.h | 16 +-
src/gmm/gmm_transposed.h | 16 +-
src/gmm/gmm_tri_solve.h | 16 +-
src/gmm/gmm_vector.h | 18 +-
src/gmm/gmm_vector_to_matrix.h | 16 +-
superlu/Makefile.in | 1 -
superlu/slu_cdefs.h | 12 +-
superlu/slu_sdefs.h | 12 +-
superlu/slu_zdefs.h | 12 +-
tests-2.0/Makefile.am | 156 -
tests-2.0/Makefile.in | 1592 -----
tests-2.0/bilaplacian.cc | 404 --
tests-2.0/bilaplacian.param | 74 -
tests-2.0/bilaplacian.pl | 81 -
tests-2.0/dynamic_array.cc | 266 -
tests-2.0/dynamic_array.pl | 33 -
tests-2.0/dynamic_friction.cc | 776 ---
tests-2.0/dynamic_friction.param | 97 -
tests-2.0/dynamic_friction.pl | 81 -
tests-2.0/dynamic_tas.cc | 62 -
tests-2.0/dynamic_tas.pl | 32 -
tests-2.0/elastostatic.cc | 545 --
tests-2.0/elastostatic.param | 111 -
tests-2.0/elastostatic.pl | 101 -
tests-2.0/geo_trans_inv.cc | 236 -
tests-2.0/geo_trans_inv.param | 17 -
tests-2.0/geo_trans_inv.pl | 50 -
tests-2.0/helmholtz.cc | 246 -
tests-2.0/integration.cc | 472 --
tests-2.0/integration.pl | 31 -
tests-2.0/laplacian.cc | 336 --
tests-2.0/laplacian.param | 69 -
tests-2.0/laplacian.pl | 121 -
tests-2.0/nonlinear_elastostatic.cc | 531 --
tests-2.0/nonlinear_elastostatic.param | 74 -
tests-2.0/nonlinear_elastostatic.pl | 74 -
tests-2.0/plasticity.cc | 305 -
tests-2.0/plasticity.pl | 66 -
tests-2.0/plate.cc | 597 --
tests-2.0/plate.param | 85 -
tests-2.0/plate.pl | 67 -
tests-2.0/poly.cc | 192 -
tests-2.0/poly.pl | 31 -
tests-2.0/schwarz_additive.cc | 313 -
tests-2.0/schwarz_additive.param | 33 -
tests-2.0/schwarz_additive.pl | 67 -
tests-2.0/stokes.cc | 243 -
tests-2.0/stokes.param | 55 -
tests-2.0/stokes.pl | 60 -
tests-2.0/test_assembly.cc | 1884 ------
tests-2.0/test_assembly.pl | 50 -
tests-2.0/test_int_set.cc | 298 -
tests-2.0/test_int_set.pl | 30 -
tests-2.0/test_interpolated_fem.cc | 280 -
tests-2.0/test_interpolated_fem.param | 22 -
tests-2.0/test_interpolation.cc | 350 --
tests-2.0/test_interpolation.pl | 33 -
tests-2.0/test_kdtree.cc | 151 -
tests-2.0/test_kdtree.pl | 32 -
tests-2.0/test_mat_elem.cc | 372 --
tests-2.0/test_mat_elem.pl | 100 -
tests-2.0/test_mesh.cc | 356 --
tests-2.0/test_mesh.pl | 30 -
tests-2.0/test_mesh_im_level_set.cc | 183 -
tests-2.0/test_mesh_im_level_set.pl | 32 -
tests-2.0/test_norm.cc | 121 -
tests-2.0/test_norm.pl | 32 -
tests-2.0/test_rtree.cc | 244 -
tests-2.0/test_rtree.pl | 32 -
tests-2.0/test_slice.cc | 105 -
tests-2.0/test_slice.pl | 32 -
tests-2.0/test_small_vector.cc | 798 ---
tests-2.0/test_tree_sorted.cc | 129 -
tests/Makefile.am | 54 +-
tests/Makefile.in | 240 +-
tests/bilaplacian.cc | 325 +-
tests/bilaplacian.param | 8 +-
tests/bilaplacian.pl | 8 +-
tests/crack.cc | 61 +-
tests/crack.param | 6 -
tests/crack.pl | 10 +-
tests/cyl_slicer.cc | 16 +-
tests/cyl_slicer.pl | 6 +-
tests/dynamic_array.cc | 14 +-
tests/dynamic_array.pl | 6 +-
tests/dynamic_friction.cc | 909 ---
tests/dynamic_friction.net | 794 ---
tests/dynamic_friction.param | 98 -
tests/dynamic_friction.pl | 83 -
tests/dynamic_tas.cc | 14 +-
tests/dynamic_tas.pl | 6 +-
tests/elastostatic.cc | 22 +-
tests/elastostatic.pl | 8 +-
tests/geo_trans_inv.cc | 14 +-
tests/geo_trans_inv.pl | 6 +-
tests/gmm_torture01_lusolve.cc | 14 +-
tests/gmm_torture05_mult.cc | 14 +-
tests/gmm_torture06_mat_mult.cc | 16 +-
tests/gmm_torture10_qr.cc | 14 +-
tests/gmm_torture15_sub.cc | 14 +-
tests/gmm_torture20_iterative_solvers.cc | 14 +-
tests/heat_equation.cc | 118 +-
tests/heat_equation.param | 5 -
tests/heat_equation.pl | 10 +-
tests/helmholtz.cc | 57 +-
tests/helmholtz.pl | 6 +-
tests/integration.cc | 15 +-
tests/integration.pl | 6 +-
tests/laplacian.cc | 18 +-
tests/laplacian.pl | 8 +-
tests/laplacian_with_bricks.cc | 19 +-
tests/laplacian_with_bricks.pl | 8 +-
tests/make_gmm_test.pl | 6 +-
tests/nonlinear_elastostatic.cc | 77 +-
tests/nonlinear_elastostatic.param | 10 +-
tests/nonlinear_elastostatic.pl | 6 +-
tests/nonlinear_membrane.cc | 156 +-
tests/nonlinear_membrane.param | 2 +-
tests/nonlinear_membrane.pl | 6 +-
tests/plasticity.cc | 349 +-
tests/plasticity.pl | 6 +-
tests/plasticity_old_brick.cc | 300 -
tests/plasticity_old_brick.param | 87 -
tests/plasticity_old_brick.pl | 66 -
tests/plate.cc | 228 +-
tests/plate.param | 27 +-
tests/plate.pl | 6 +-
tests/poly.cc | 14 +-
tests/poly.pl | 6 +-
tests/schwarz_additive.cc | 15 +-
tests/schwarz_additive.pl | 8 +-
tests/stokes.cc | 22 +-
tests/stokes.pl | 6 +-
tests/test_assembly.cc | 102 +-
tests/test_assembly.pl | 6 +-
tests/test_continuation.cc | 98 +-
tests/test_continuation.param | 8 +-
tests/{helmholtz.pl => test_continuation.pl} | 58 +-
tests/test_gmm_matrix_functions.cc | 112 +
.../test_gmm_matrix_functions.pl | 15 +-
tests/test_int_set.cc | 14 +-
tests/test_int_set.pl | 6 +-
tests/test_interpolated_fem.cc | 14 +-
tests/test_interpolated_fem.pl | 6 +-
tests/test_interpolation.cc | 22 +-
tests/test_interpolation.pl | 6 +-
tests/test_kdtree.cc | 14 +-
tests/test_kdtree.pl | 6 +-
tests/test_large_sliding_contact.cc | 449 --
tests/test_large_sliding_contact.param | 40 -
tests/test_large_sliding_contact.pl | 67 -
tests/test_mat_elem.cc | 14 +-
tests/test_mat_elem.pl | 6 +-
tests/test_mesh.cc | 14 +-
tests/test_mesh.pl | 6 +-
tests/test_mesh_generation.cc | 18 +-
.../test_mesh_generation.pl | 9 +-
tests/test_mesh_im_level_set.cc | 16 +-
tests/test_mesh_im_level_set.pl | 6 +-
tests/test_norm.cc | 114 -
tests/test_norm.pl | 32 -
tests/test_range_basis.cc | 16 +-
tests/test_range_basis.pl | 8 +-
tests/test_rtree.cc | 14 +-
tests/test_rtree.pl | 6 +-
tests/test_slice.cc | 14 +-
tests/test_slice.pl | 6 +-
tests/test_small_vector.cc | 14 +-
tests/test_small_vector.pl | 6 +-
tests/test_tree_sorted.cc | 14 +-
tests/test_tree_sorted.pl | 6 +-
tests/thermo_elasticity_electrical_coupling.cc | 299 +
tests/thermo_elasticity_electrical_coupling.param | 21 +
.../thermo_elasticity_electrical_coupling.pl | 56 +-
tests/wave_equation.cc | 24 +-
tests/wave_equation.pl | 8 +-
831 files changed, 37422 insertions(+), 87443 deletions(-)
mode change 100755 => 100644 AUTHORS
delete mode 100755 BUGS
create mode 100644 bin/ansys2getfem_mesh
create mode 100755 bin/fig2eps
create mode 100755 bin/mesh_matlab_to_getfem
create mode 100755 bin/split_cmdref
mode change 100755 => 100644 contrib/aposteriori/aposteriori.param
delete mode 100644 contrib/bimat_contact_crack_test/Makefile.am
delete mode 100644 contrib/bimat_contact_crack_test/Makefile.in
delete mode 100644 contrib/bimat_contact_crack_test/bimaterial_crack_test.cc
delete mode 100755 contrib/bimat_contact_crack_test/bimaterial_crack_test.param
delete mode 100644 contrib/bimat_contact_crack_test/bimaterial_crack_test.pl
mode change 100755 => 100644 contrib/bimaterial_crack_test/bimaterial_crack_test.param
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