[sfepy] branch master updated (8e3f40c -> fbe3279)
Anton Gladky
gladk at moszumanska.debian.org
Fri Apr 22 22:09:42 UTC 2016
This is an automated email from the git hooks/post-receive script.
gladk pushed a change to branch master
in repository sfepy.
from 8e3f40c Update changelog.
adds 54a2bd3 Imported Upstream version 2016.1
new 06d4f5d Merge tag 'upstream/2016.1'
new 120652d Apply cme fix dpkg. (Closes: #801183)
new fbe3279 Update changelog.
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
AUTHORS | 2 +
INSTALL | 11 +-
MANIFEST.in | 2 +-
build_helpers.py | 88 +-
debian/changelog | 7 +
debian/control | 6 +-
doc/Makefile | 6 +
doc/archived_news.rst | 23 +
doc/conf.py | 12 +
doc/dev/gitwash/branch_dropdown.png | Bin 16311 -> 0 bytes
doc/dev/gitwash/branch_list.png | Bin 13361 -> 0 bytes
doc/dev/gitwash/branch_list_compare.png | Bin 10679 -> 0 bytes
doc/dev/gitwash/configure_git.rst | 158 -
doc/dev/gitwash/development_workflow.rst | 415 --
doc/dev/gitwash/dot2_dot3.rst | 28 -
doc/dev/gitwash/following_latest.rst | 36 -
doc/dev/gitwash/forking_button.png | Bin 13092 -> 0 bytes
doc/dev/gitwash/forking_hell.rst | 33 -
doc/dev/gitwash/git_development.rst | 16 -
doc/dev/gitwash/git_install.rst | 26 -
doc/dev/gitwash/git_intro.rst | 18 -
doc/dev/gitwash/git_links.inc | 61 -
doc/dev/gitwash/git_resources.rst | 59 -
doc/dev/gitwash/index.rst | 13 -
doc/dev/gitwash/known_projects.inc | 41 -
doc/dev/gitwash/links.inc | 4 -
doc/dev/gitwash/maintainer_workflow.rst | 96 -
doc/dev/gitwash/patching.rst | 134 -
doc/dev/gitwash/pull_button.png | Bin 12893 -> 0 bytes
doc/dev/gitwash/set_up_fork.rst | 68 -
doc/dev/gitwash/this_project.inc | 5 -
doc/developer_guide.rst | 426 +-
doc/examples.rst | 2 +
doc/images/mat_optim/iterations.png | Bin 0 -> 52969 bytes
doc/images/mat_optim/macro_micro.png | Bin 0 -> 88060 bytes
doc/images/mat_optim/microstruct_rve.png | Bin 0 -> 218969 bytes
doc/images/mat_optim/tensile_test.png | Bin 0 -> 48384 bytes
doc/images/sfepy_gui.png | Bin 32596 -> 0 bytes
doc/images/splinebox/spbox.png | Bin 0 -> 407904 bytes
doc/images/splinebox/spbox_cp.png | Bin 0 -> 18424 bytes
doc/images/splinebox/spregion2d.png | Bin 0 -> 376100 bytes
doc/images/splinebox/spregion2d_def.png | Bin 0 -> 289223 bytes
doc/index.rst | 3 +
doc/installation.rst | 26 +-
doc/links.inc | 7 +
doc/make.bat | 8 +
doc/manpages.rst | 21 +
doc/mat_optim.rst | 166 +
doc/mat_optim/homogenization_opt_src.rst | 8 +
doc/mat_optim/linear_elasticity_opt_src.rst | 8 +
doc/mat_optim/material_opt_src.rst | 8 +
doc/news.rst | 42 +-
doc/release_notes.rst | 1191 ++++++
doc/release_tasks.rst | 2 +-
doc/splinebox.rst | 183 +
.../{gen_term_table.rst => show_mesh_info.rst} | 4 +-
doc/src/sfepy/discrete/common/extmods/_fmfield.rst | 6 +
.../sfepy/discrete/common/extmods/_geommech.rst | 6 +
doc/src/sfepy/discrete/common/extmods/assemble.rst | 6 +
doc/src/sfepy/discrete/common/extmods/cmesh.rst | 6 +
.../sfepy/discrete/common/extmods/crefcoors.rst | 6 +
doc/src/sfepy/discrete/common/extmods/mappings.rst | 6 +
doc/src/sfepy/discrete/common/global_interp.rst | 6 +
doc/src/sfepy/discrete/fem/extmods/_fmfield.rst | 6 -
doc/src/sfepy/discrete/fem/extmods/_geommech.rst | 6 -
doc/src/sfepy/discrete/fem/extmods/assemble.rst | 6 -
doc/src/sfepy/discrete/fem/extmods/cmesh.rst | 6 -
doc/src/sfepy/discrete/fem/extmods/mappings.rst | 6 -
doc/src/sfepy/discrete/fem/fea.rst | 6 -
doc/src/sfepy/discrete/fem/global_interp.rst | 6 -
doc/src/sfepy/discrete/mass_operator.rst | 6 -
doc/src/sfepy/linalg/sympy_operators.rst | 6 +
doc/src/sfepy/mesh/bspline.rst | 6 +
doc/src/sfepy/parallel/evaluate.rst | 6 +
doc/src/sfepy/parallel/parallel.rst | 6 +
doc/src/sfepy/parallel/plot_parallel_dofs.rst | 6 +
doc/src/sfepy/terms/terms_new.rst | 6 -
doc/terms_overview.rst | 12 +-
doc/theory.rst | 2 +-
doc/tutorial.rst | 4 +-
doc/users_guide.rst | 165 +-
examples/diffusion/darcy_flow_multicomp.py | 110 +
examples/diffusion/laplace_1d.py | 2 +-
.../laplace_shifted_periodic.py | 2 +-
examples/diffusion/poisson_parallel_interactive.py | 472 +++
examples/diffusion/time_advection_diffusion.py | 80 +
examples/diffusion/time_poisson_explicit.py | 16 +-
examples/diffusion/time_poisson_interactive.py | 256 ++
examples/homogenization/homogenization_opt.py | 170 +
examples/homogenization/linear_elasticity_opt.py | 103 +
examples/homogenization/material_opt.py | 154 +
.../rs_correctors.py | 222 +-
examples/large_deformation/active_fibres.py | 4 +-
examples/large_deformation/balloon.py | 288 ++
.../compare_elastic_materials.py | 160 +-
examples/large_deformation/hyperelastic.py | 4 +-
examples/large_deformation/perfusion_tl.py | 4 +-
examples/linear_elasticity/its2D_2.py | 3 +-
examples/linear_elasticity/its2D_3.py | 4 +-
examples/linear_elasticity/its2D_interactive.py | 19 +-
.../linear_elastic_interactive.py} | 0
.../modal_analysis.py | 122 +-
examples/linear_elasticity/nodal_lcbcs.py | 218 +
examples/miscellaneous/compare_scalar_terms.py | 119 -
examples/miscellaneous/compare_vector_terms.py | 114 -
.../live_plot => miscellaneous}/live_plot.py | 0
examples/{biot => multi_physics}/__init__.py | 0
examples/{biot => multi_physics}/biot.py | 0
examples/{biot => multi_physics}/biot_npbc.py | 0
.../{biot => multi_physics}/biot_npbc_lagrange.py | 0
.../multi_physics/biot_parallel_interactive.py | 469 +++
.../piezo.py => multi_physics/piezo_elasticity.py} | 133 +-
.../thermal_electric.py | 4 +-
.../thermo_elasticity.py | 0
.../thermo_elasticity_ess.py | 0
examples/standalone/elastic_materials/__init__.py | 0
examples/standalone/elastic_materials/el3.mesh | 25 -
.../standalone/homogenized_elasticity/__init__.py | 0
examples/standalone/interactive/__init__.py | 0
examples/standalone/live_plot/__init__.py | 0
examples/standalone/thermal_electric/__init__.py | 0
examples/thermo_elasticity/__init__.py | 0
.../meshes => meshes/2d/special}/osteonT1_11.mesh | 0
meshes/3d/matrix_fiber_rand.vtk | 4428 ++++++++++++++++++++
meshes/3d/special/cross3d.mesh | 45 +
meshes/3d/unit_ball.mesh | 1481 +++++++
meshes/various_formats/abaqus_quad.inp | 120 +-
meshes/various_formats/abaqus_quad_tri.inp | 130 +-
meshes/various_formats/abaqus_tri.inp | 168 +-
postproc.py | 12 +
script/convert_mesh.py | 14 +-
script/eval_ns_forms.py | 1 +
script/extract_surface.py | 17 +-
script/gen_gallery.py | 3 +-
script/plot_mesh.py | 4 +-
script/save_basis.py | 24 +-
script/show_authors.py | 25 +-
script/show_mesh_info.py | 35 +
script/sync_module_docs.py | 1 -
scripts-common/extractor.py | 1 +
scripts-common/homogen.py | 1 +
scripts-common/phonon.py | 1 +
scripts-common/postproc.py | 1 +
scripts-common/probe.py | 1 +
scripts-common/run_tests.py | 1 +
scripts-common/schroedinger.py | 1 +
scripts-common/shaper.py | 1 +
scripts-common/simple.py | 1 +
scripts-common/test_install.py | 1 +
setup.py | 136 +-
sfepy-run | 85 +
sfepy/applications/pde_solver_app.py | 10 +-
sfepy/base/base.py | 2 +-
sfepy/discrete/common/__init__.py | 1 +
sfepy/discrete/common/dof_info.py | 6 +-
sfepy/discrete/common/domain.py | 32 +-
.../discrete/common/extmods}/__init__.py | 0
.../discrete/{fem => common}/extmods/_fmfield.pxd | 2 +
.../discrete/{fem => common}/extmods/_fmfield.pyx | 0
.../discrete/{fem => common}/extmods/_geommech.pxd | 2 +-
.../discrete/{fem => common}/extmods/_geommech.pyx | 4 +-
.../discrete/{fem => common}/extmods/assemble.pyx | 0
sfepy/discrete/common/extmods/cmesh.pxd | 123 +
sfepy/discrete/{fem => common}/extmods/cmesh.pyx | 388 +-
sfepy/discrete/{fem => common}/extmods/common.h | 0
.../{fem => common}/extmods/common_python.c | 0
sfepy/discrete/common/extmods/crefcoors.pyx | 240 ++
sfepy/discrete/{fem => common}/extmods/fmfield.c | 22 +-
sfepy/discrete/{fem => common}/extmods/fmfield.h | 1 +
sfepy/discrete/{fem => common}/extmods/geommech.c | 0
sfepy/discrete/{fem => common}/extmods/geommech.h | 0
sfepy/discrete/common/extmods/geomtrans.c | 71 +
sfepy/discrete/{fem => common}/extmods/geomtrans.h | 6 +-
.../discrete/{fem => common}/extmods/mappings.pxd | 0
.../discrete/{fem => common}/extmods/mappings.pyx | 0
sfepy/discrete/{fem => common}/extmods/mesh.c | 113 +
sfepy/discrete/{fem => common}/extmods/mesh.h | 7 +
sfepy/discrete/common/extmods/meshutils.c | 430 ++
sfepy/discrete/common/extmods/meshutils.h | 26 +
sfepy/discrete/common/extmods/refcoors.c | 482 +++
sfepy/discrete/common/extmods/refcoors.h | 49 +
sfepy/discrete/{fem => common}/extmods/refmaps.c | 0
sfepy/discrete/{fem => common}/extmods/refmaps.h | 0
sfepy/discrete/{fem => common}/extmods/setup.py | 17 +-
sfepy/discrete/{fem => common}/extmods/sort.c | 0
sfepy/discrete/{fem => common}/extmods/sort.h | 0
sfepy/discrete/{fem => common}/extmods/types.h | 0
sfepy/discrete/{fem => common}/extmods/types.pxd | 0
.../discrete/{fem => common}/extmods/version.h.in | 0
sfepy/discrete/common/fields.py | 167 +-
sfepy/discrete/common/global_interp.py | 357 ++
sfepy/discrete/common/mappings.py | 81 +-
sfepy/discrete/common/region.py | 296 +-
sfepy/discrete/common/setup.py | 2 +
sfepy/discrete/equations.py | 87 +-
sfepy/discrete/evaluate.py | 12 +-
sfepy/discrete/fem/domain.py | 212 +-
sfepy/discrete/fem/extmods/__init__.py | 1 -
sfepy/discrete/fem/extmods/bases.pyx | 725 +---
sfepy/discrete/fem/extmods/geomtrans.c | 52 -
sfepy/discrete/fem/extmods/lagrange.c | 352 +-
sfepy/discrete/fem/extmods/lagrange.h | 83 +-
sfepy/discrete/fem/extmods/lobatto_bases.pyx | 6 +-
sfepy/discrete/fem/extmods/meshutils.c | 414 --
sfepy/discrete/fem/extmods/meshutils.h | 24 -
sfepy/discrete/fem/extmods/setup.py | 67 +-
sfepy/discrete/fem/facets.py | 10 +-
sfepy/discrete/fem/fe_surface.py | 27 +-
sfepy/discrete/fem/fea.py | 472 ---
sfepy/discrete/fem/fields_base.py | 881 ++--
sfepy/discrete/fem/fields_hierarchic.py | 308 +-
sfepy/discrete/fem/fields_nodal.py | 225 +-
sfepy/discrete/fem/global_interp.py | 126 -
sfepy/discrete/fem/lcbc_operators.py | 157 +-
sfepy/discrete/fem/mappings.py | 17 +-
sfepy/discrete/fem/mesh.py | 594 +--
sfepy/discrete/fem/meshio.py | 302 +-
sfepy/discrete/fem/poly_spaces.py | 122 +-
sfepy/discrete/fem/refine.py | 167 +-
sfepy/discrete/fem/utils.py | 65 +-
sfepy/discrete/functions.py | 18 +-
sfepy/discrete/iga/domain.py | 13 +-
sfepy/discrete/iga/extmods/igac.pyx | 238 +-
sfepy/discrete/iga/extmods/nurbs.c | 302 +-
sfepy/discrete/iga/extmods/nurbs.h | 53 +-
sfepy/discrete/iga/extmods/setup.py | 2 +-
sfepy/discrete/iga/fields.py | 65 +-
sfepy/discrete/iga/mappings.py | 2 +-
sfepy/discrete/iga/plot_nurbs.py | 11 +-
sfepy/discrete/mass_operator.py | 32 -
sfepy/discrete/materials.py | 90 +-
sfepy/discrete/parse_regions.py | 13 +-
sfepy/discrete/probes.py | 68 +-
sfepy/discrete/problem.py | 388 +-
sfepy/discrete/projections.py | 27 +-
sfepy/discrete/variables.py | 374 +-
sfepy/homogenization/coefs_base.py | 9 +-
sfepy/homogenization/recovery.py | 38 +-
sfepy/linalg/extmods/crcm.pyx | 2 +-
sfepy/linalg/extmods/setup.py | 2 +-
sfepy/linalg/geometry.py | 6 +-
sfepy/linalg/sparse.py | 2 +-
{tests => sfepy/linalg}/sympy_operators.py | 2 +-
sfepy/linalg/utils.py | 53 +-
sfepy/mechanics/membranes.py | 9 +-
sfepy/mesh/bspline.py | 71 +-
sfepy/mesh/geom_tools.py | 6 +-
sfepy/mesh/mesh_generators.py | 321 +-
sfepy/mesh/mesh_tools.py | 87 +-
sfepy/mesh/splinebox.py | 386 +-
.../standalone => sfepy/parallel}/__init__.py | 0
sfepy/parallel/evaluate.py | 62 +
sfepy/parallel/parallel.py | 806 ++++
sfepy/parallel/plot_parallel_dofs.py | 139 +
sfepy/{discrete/common => parallel}/setup.py | 0
sfepy/postprocess/plot_cmesh.py | 61 +-
sfepy/postprocess/plot_dofs.py | 73 +-
sfepy/postprocess/plot_facets.py | 35 +-
sfepy/postprocess/plot_quadrature.py | 22 +-
sfepy/postprocess/probes_vtk.py | 28 +-
sfepy/postprocess/sources.py | 40 +-
sfepy/postprocess/time_history.py | 30 +-
sfepy/postprocess/utils_vtk.py | 1 -
sfepy/postprocess/viewer.py | 27 +-
sfepy/setup.py | 1 +
sfepy/solvers/eigen.py | 17 +-
sfepy/solvers/ls.py | 205 +-
sfepy/solvers/nls.py | 102 +
sfepy/solvers/oseen.py | 12 +-
sfepy/solvers/solvers.py | 6 +
sfepy/solvers/ts.py | 64 +-
sfepy/solvers/ts_solvers.py | 150 +-
sfepy/terms/__init__.py | 2 +-
sfepy/terms/extmods/setup.py | 2 +-
sfepy/terms/extmods/terms.pyx | 71 +-
sfepy/terms/extmods/terms_op.c | 76 +-
sfepy/terms/extmods/terms_op.h | 5 +-
sfepy/terms/terms.py | 490 +--
sfepy/terms/terms_acoustic.py | 166 -
sfepy/terms/terms_basic.py | 18 +-
sfepy/terms/terms_biot.py | 8 +-
sfepy/terms/terms_diffusion.py | 73 +-
sfepy/terms/terms_dot.py | 181 +-
sfepy/terms/terms_elastic.py | 25 +-
sfepy/terms/terms_fibres.py | 82 +-
sfepy/terms/terms_hyperelastic_base.py | 104 +-
sfepy/terms/terms_hyperelastic_tl.py | 19 +-
sfepy/terms/terms_hyperelastic_ul.py | 313 +-
sfepy/terms/terms_membrane.py | 24 +-
sfepy/terms/terms_navier_stokes.py | 2 +-
sfepy/terms/terms_new.py | 259 --
sfepy/terms/terms_piezo.py | 55 +
sfepy/terms/terms_point.py | 11 +-
sfepy/terms/terms_surface.py | 21 +-
sfepy/version.py | 12 +-
simple.py | 13 +
test_install.py | 21 +-
tests/test_assembling.py | 8 +-
tests/test_cmesh.py | 4 +-
tests/test_conditions.py | 255 ++
tests/test_domain.py | 26 +-
tests/test_ebcs.py | 79 -
tests/test_eigenvalue_solvers.py | 10 +-
tests/test_elasticity_small_strain.py | 6 +-
tests/test_functions.py | 14 +-
tests/test_input_balloon.py | 7 +
tests/test_input_biot.py | 2 +-
tests/test_input_biot_npbc.py | 2 +-
tests/test_input_biot_npbc_lagrange.py | 2 +-
tests/test_input_darcy_flow_multicomp.py | 6 +
tests/test_input_nodal_lcbcs.py | 6 +
...put_piezo.py => test_input_piezo_elasticity.py} | 4 +-
tests/test_input_thermo_elasticity.py | 2 +-
tests/test_input_thermo_elasticity_ess.py | 2 +-
tests/test_input_time_advection_diffusion.py | 7 +
tests/test_lcbcs.py | 2 +-
tests/test_linear_solvers.py | 86 +-
tests/test_linearization.py | 9 +-
tests/test_mesh_expand.py | 30 +
tests/test_mesh_generators.py | 118 +-
tests/test_mesh_interp.py | 136 +-
tests/test_mesh_smoothing.py | 9 +-
tests/test_meshio.py | 102 +-
tests/test_msm_symbolic.py | 161 +-
tests/test_normals.py | 2 +-
tests/test_parsing.py | 3 +-
tests/test_poly_spaces.py | 32 +-
tests/test_projections.py | 57 +
tests/test_ref_coors.py | 137 +
tests/test_regions.py | 6 +-
tests/test_splinebox.py | 92 +-
tests/test_term_call_modes.py | 27 +-
tests/test_term_consistency.py | 3 +-
333 files changed, 20756 insertions(+), 9565 deletions(-)
delete mode 100644 doc/dev/gitwash/branch_dropdown.png
delete mode 100644 doc/dev/gitwash/branch_list.png
delete mode 100644 doc/dev/gitwash/branch_list_compare.png
delete mode 100644 doc/dev/gitwash/configure_git.rst
delete mode 100644 doc/dev/gitwash/development_workflow.rst
delete mode 100644 doc/dev/gitwash/dot2_dot3.rst
delete mode 100644 doc/dev/gitwash/following_latest.rst
delete mode 100644 doc/dev/gitwash/forking_button.png
delete mode 100644 doc/dev/gitwash/forking_hell.rst
delete mode 100644 doc/dev/gitwash/git_development.rst
delete mode 100644 doc/dev/gitwash/git_install.rst
delete mode 100644 doc/dev/gitwash/git_intro.rst
delete mode 100644 doc/dev/gitwash/git_links.inc
delete mode 100644 doc/dev/gitwash/git_resources.rst
delete mode 100644 doc/dev/gitwash/index.rst
delete mode 100644 doc/dev/gitwash/known_projects.inc
delete mode 100644 doc/dev/gitwash/links.inc
delete mode 100644 doc/dev/gitwash/maintainer_workflow.rst
delete mode 100644 doc/dev/gitwash/patching.rst
delete mode 100644 doc/dev/gitwash/pull_button.png
delete mode 100644 doc/dev/gitwash/set_up_fork.rst
delete mode 100644 doc/dev/gitwash/this_project.inc
create mode 100644 doc/images/mat_optim/iterations.png
create mode 100644 doc/images/mat_optim/macro_micro.png
create mode 100644 doc/images/mat_optim/microstruct_rve.png
create mode 100644 doc/images/mat_optim/tensile_test.png
delete mode 100644 doc/images/sfepy_gui.png
create mode 100644 doc/images/splinebox/spbox.png
create mode 100644 doc/images/splinebox/spbox_cp.png
create mode 100644 doc/images/splinebox/spregion2d.png
create mode 100644 doc/images/splinebox/spregion2d_def.png
create mode 100644 doc/manpages.rst
create mode 100644 doc/mat_optim.rst
create mode 100644 doc/mat_optim/homogenization_opt_src.rst
create mode 100644 doc/mat_optim/linear_elasticity_opt_src.rst
create mode 100644 doc/mat_optim/material_opt_src.rst
create mode 100644 doc/splinebox.rst
copy doc/src/script/{gen_term_table.rst => show_mesh_info.rst} (50%)
create mode 100644 doc/src/sfepy/discrete/common/extmods/_fmfield.rst
create mode 100644 doc/src/sfepy/discrete/common/extmods/_geommech.rst
create mode 100644 doc/src/sfepy/discrete/common/extmods/assemble.rst
create mode 100644 doc/src/sfepy/discrete/common/extmods/cmesh.rst
create mode 100644 doc/src/sfepy/discrete/common/extmods/crefcoors.rst
create mode 100644 doc/src/sfepy/discrete/common/extmods/mappings.rst
create mode 100644 doc/src/sfepy/discrete/common/global_interp.rst
delete mode 100644 doc/src/sfepy/discrete/fem/extmods/_fmfield.rst
delete mode 100644 doc/src/sfepy/discrete/fem/extmods/_geommech.rst
delete mode 100644 doc/src/sfepy/discrete/fem/extmods/assemble.rst
delete mode 100644 doc/src/sfepy/discrete/fem/extmods/cmesh.rst
delete mode 100644 doc/src/sfepy/discrete/fem/extmods/mappings.rst
delete mode 100644 doc/src/sfepy/discrete/fem/fea.rst
delete mode 100644 doc/src/sfepy/discrete/fem/global_interp.rst
delete mode 100644 doc/src/sfepy/discrete/mass_operator.rst
create mode 100644 doc/src/sfepy/linalg/sympy_operators.rst
create mode 100644 doc/src/sfepy/mesh/bspline.rst
create mode 100644 doc/src/sfepy/parallel/evaluate.rst
create mode 100644 doc/src/sfepy/parallel/parallel.rst
create mode 100644 doc/src/sfepy/parallel/plot_parallel_dofs.rst
delete mode 100644 doc/src/sfepy/terms/terms_new.rst
create mode 100644 examples/diffusion/darcy_flow_multicomp.py
rename examples/{standalone/interactive => diffusion}/laplace_shifted_periodic.py (99%)
create mode 100755 examples/diffusion/poisson_parallel_interactive.py
create mode 100644 examples/diffusion/time_advection_diffusion.py
create mode 100755 examples/diffusion/time_poisson_interactive.py
create mode 100644 examples/homogenization/homogenization_opt.py
create mode 100644 examples/homogenization/linear_elasticity_opt.py
create mode 100644 examples/homogenization/material_opt.py
rename examples/{standalone/homogenized_elasticity => homogenization}/rs_correctors.py (56%)
mode change 100644 => 100755
create mode 100644 examples/large_deformation/balloon.py
rename examples/{standalone/elastic_materials => large_deformation}/compare_elastic_materials.py (58%)
mode change 100644 => 100755
rename examples/{standalone/interactive/linear_elasticity.py => linear_elasticity/linear_elastic_interactive.py} (100%)
rename examples/{standalone/interactive => linear_elasticity}/modal_analysis.py (69%)
create mode 100644 examples/linear_elasticity/nodal_lcbcs.py
delete mode 100644 examples/miscellaneous/compare_scalar_terms.py
delete mode 100644 examples/miscellaneous/compare_vector_terms.py
rename examples/{standalone/live_plot => miscellaneous}/live_plot.py (100%)
rename examples/{biot => multi_physics}/__init__.py (100%)
rename examples/{biot => multi_physics}/biot.py (100%)
rename examples/{biot => multi_physics}/biot_npbc.py (100%)
rename examples/{biot => multi_physics}/biot_npbc_lagrange.py (100%)
create mode 100755 examples/multi_physics/biot_parallel_interactive.py
rename examples/{piezo_elasticity/piezo.py => multi_physics/piezo_elasticity.py} (56%)
rename examples/{standalone/thermal_electric => multi_physics}/thermal_electric.py (98%)
rename examples/{thermo_elasticity => multi_physics}/thermo_elasticity.py (100%)
rename examples/{thermo_elasticity => multi_physics}/thermo_elasticity_ess.py (100%)
delete mode 100644 examples/standalone/elastic_materials/__init__.py
delete mode 100644 examples/standalone/elastic_materials/el3.mesh
delete mode 100644 examples/standalone/homogenized_elasticity/__init__.py
delete mode 100644 examples/standalone/interactive/__init__.py
delete mode 100644 examples/standalone/live_plot/__init__.py
delete mode 100644 examples/standalone/thermal_electric/__init__.py
delete mode 100644 examples/thermo_elasticity/__init__.py
rename {examples/standalone/homogenized_elasticity/meshes => meshes/2d/special}/osteonT1_11.mesh (100%)
create mode 100644 meshes/3d/matrix_fiber_rand.vtk
create mode 100644 meshes/3d/special/cross3d.mesh
create mode 100644 meshes/3d/unit_ball.mesh
create mode 100755 script/show_mesh_info.py
create mode 120000 scripts-common/extractor.py
create mode 120000 scripts-common/homogen.py
create mode 120000 scripts-common/phonon.py
create mode 120000 scripts-common/postproc.py
create mode 120000 scripts-common/probe.py
create mode 120000 scripts-common/run_tests.py
create mode 120000 scripts-common/schroedinger.py
create mode 120000 scripts-common/shaper.py
create mode 120000 scripts-common/simple.py
create mode 120000 scripts-common/test_install.py
create mode 100755 sfepy-run
rename {examples/piezo_elasticity => sfepy/discrete/common/extmods}/__init__.py (100%)
rename sfepy/discrete/{fem => common}/extmods/_fmfield.pxd (99%)
rename sfepy/discrete/{fem => common}/extmods/_fmfield.pyx (100%)
rename sfepy/discrete/{fem => common}/extmods/_geommech.pxd (74%)
rename sfepy/discrete/{fem => common}/extmods/_geommech.pyx (77%)
rename sfepy/discrete/{fem => common}/extmods/assemble.pyx (100%)
create mode 100644 sfepy/discrete/common/extmods/cmesh.pxd
rename sfepy/discrete/{fem => common}/extmods/cmesh.pyx (72%)
rename sfepy/discrete/{fem => common}/extmods/common.h (100%)
rename sfepy/discrete/{fem => common}/extmods/common_python.c (100%)
create mode 100644 sfepy/discrete/common/extmods/crefcoors.pyx
rename sfepy/discrete/{fem => common}/extmods/fmfield.c (98%)
rename sfepy/discrete/{fem => common}/extmods/fmfield.h (98%)
rename sfepy/discrete/{fem => common}/extmods/geommech.c (100%)
rename sfepy/discrete/{fem => common}/extmods/geommech.h (100%)
create mode 100644 sfepy/discrete/common/extmods/geomtrans.c
rename sfepy/discrete/{fem => common}/extmods/geomtrans.h (72%)
rename sfepy/discrete/{fem => common}/extmods/mappings.pxd (100%)
rename sfepy/discrete/{fem => common}/extmods/mappings.pyx (100%)
rename sfepy/discrete/{fem => common}/extmods/mesh.c (90%)
rename sfepy/discrete/{fem => common}/extmods/mesh.h (95%)
create mode 100644 sfepy/discrete/common/extmods/meshutils.c
create mode 100644 sfepy/discrete/common/extmods/meshutils.h
create mode 100644 sfepy/discrete/common/extmods/refcoors.c
create mode 100644 sfepy/discrete/common/extmods/refcoors.h
rename sfepy/discrete/{fem => common}/extmods/refmaps.c (100%)
rename sfepy/discrete/{fem => common}/extmods/refmaps.h (100%)
copy sfepy/discrete/{fem => common}/extmods/setup.py (85%)
rename sfepy/discrete/{fem => common}/extmods/sort.c (100%)
rename sfepy/discrete/{fem => common}/extmods/sort.h (100%)
rename sfepy/discrete/{fem => common}/extmods/types.h (100%)
rename sfepy/discrete/{fem => common}/extmods/types.pxd (100%)
rename sfepy/discrete/{fem => common}/extmods/version.h.in (100%)
create mode 100644 sfepy/discrete/common/global_interp.py
delete mode 100644 sfepy/discrete/fem/extmods/geomtrans.c
delete mode 100644 sfepy/discrete/fem/extmods/meshutils.c
delete mode 100644 sfepy/discrete/fem/extmods/meshutils.h
delete mode 100644 sfepy/discrete/fem/fea.py
delete mode 100644 sfepy/discrete/fem/global_interp.py
delete mode 100644 sfepy/discrete/mass_operator.py
rename {tests => sfepy/linalg}/sympy_operators.py (98%)
rename {examples/standalone => sfepy/parallel}/__init__.py (100%)
create mode 100644 sfepy/parallel/evaluate.py
create mode 100644 sfepy/parallel/parallel.py
create mode 100644 sfepy/parallel/plot_parallel_dofs.py
copy sfepy/{discrete/common => parallel}/setup.py (100%)
delete mode 100644 sfepy/terms/terms_new.py
create mode 100644 tests/test_conditions.py
delete mode 100644 tests/test_ebcs.py
create mode 100644 tests/test_input_balloon.py
create mode 100644 tests/test_input_darcy_flow_multicomp.py
create mode 100644 tests/test_input_nodal_lcbcs.py
rename tests/{test_input_piezo.py => test_input_piezo_elasticity.py} (92%)
create mode 100644 tests/test_input_time_advection_diffusion.py
create mode 100644 tests/test_mesh_expand.py
create mode 100644 tests/test_ref_coors.py
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/sfepy.git
More information about the debian-science-commits
mailing list