[normaliz] branch master updated (f209d3e -> 0bf9710)
Jerome Benoit
calculus-guest at moszumanska.debian.org
Thu Dec 21 19:01:21 UTC 2017
This is an automated email from the git hooks/post-receive script.
calculus-guest pushed a change to branch master
in repository normaliz.
from f209d3e Imported Debian patch 3.4.1+ds-2
new f0137bc Imported Debian pre-patch 3.5.0+ds-0
adds a9fa033 New upstream version 3.1.1+ds
adds 49f5898 Merge branch 'upstream' of ssh://git.debian.org/git/debian-science/packages/normaliz into upstream
adds 888cbf7 New upstream version 3.5.0
new 29be9f8 Merge tag 'upstream/3.5.0'
adds 6379116 New upstream version 3.5.0+ds
new 6c1fd7c Merge tag 'upstream/3.5.0+ds'
new 0bf9710 Imported Debian patch 3.5.0+ds-1
The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
CHANGELOG | 14 +
Makefile.am | 11 +-
PyNormaliz/.gitignore | 7 -
PyNormaliz/.travis-install.sh | 21 -
PyNormaliz/.travis-test.sh | 10 -
PyNormaliz/.travis.yml | 25 -
PyNormaliz/Makefile | 18 -
PyNormaliz/NormalizModule.cpp | 146 +-
PyNormaliz/PyNormaliz.py | 27 +
.../examples/{first.py => first_rational.py} | 5 +-
PyNormaliz/examples/j462.py | 14 +
PyNormaliz/setup.py | 2 +-
Qsource/libQnormaliz/Qversion.h | 2 +-
README.md | 173 -
configure.ac | 37 +-
debian/README.Debian | 7 +
debian/changelog | 18 +
debian/control | 4 +-
debian/copyright | 10 +
debian/patches/series | 1 -
...test-extremely_sensitive_tests-neutralize.patch | 22 -
debian/rules | 2 +-
doc/Normaliz.pdf | Bin 714377 -> 969375 bytes
doc/Normaliz.tex | 7479 ++++++
example/3x3magiceven_lat.in | 6 +-
example/3x3magiceven_sat.in | 6 +-
example/ChF_16_1048576.in | 35 -
example/Condorcet.symm.in | 1 +
.../CondorcetExpansion.in | 2 +-
.../Condorcet-q.in => example/CondorcetRange.in | 6 +-
example/InhomCongLat.in | 7 +-
example/Makefile.am | 9 +-
example/VdM_16_1048576.in | 35 +
example/euclid.in | 8 +
test/test-/smallPF.in => example/small_proj.in | 4 +-
.../smallPF.in => example/small_proj_inhom.in | 8 +-
.../test-s/small-sh.in => example/small_sh_proj.in | 6 +-
.../small-sh.in => example/small_sh_proj_inhom.in | 10 +-
source/CMakeLists.txt | 38 +-
source/INSTALL | 171 +-
source/Makefile.am | 13 +-
source/Makefile.configuration | 17 +-
source/cmake/Modules/FindCOCOA.cmake | 2 +-
source/cmake/Modules/FindFLINT.cmake | 59 +
source/cmake/Modules/FindMPFR.cmake | 59 +
source/input.cpp | 13 +-
source/libnormaliz/CMakeLists.txt | 29 +-
source/libnormaliz/HilbertSeries.cpp | 337 +-
source/libnormaliz/HilbertSeries.h | 27 +-
source/libnormaliz/Makefile.classic | 29 +-
source/libnormaliz/bottom.cpp | 13 +-
source/libnormaliz/cone.cpp | 513 +-
source/libnormaliz/cone.h | 38 +-
.../libnormaliz/{bottom.h => cone_and_control.cpp} | 34 +-
source/libnormaliz/cone_dual_mode.cpp | 9 +
source/libnormaliz/cone_property.cpp | 34 +-
source/libnormaliz/cone_property.h | 11 +
.../{nmz_integrate.cpp => enumeration.cpp} | 18 +-
source/libnormaliz/full_cone.cpp | 72 +-
source/libnormaliz/full_cone.h | 1 +
source/libnormaliz/integer.cpp | 258 +-
source/libnormaliz/integer.h | 168 +-
source/libnormaliz/libnormaliz-templated.cpp | 83 -
source/libnormaliz/libnormaliz.cpp | 7 +-
source/libnormaliz/libnormaliz.h | 3 +-
.../libnormaliz/{bottom.h => linear_algebra.cpp} | 28 +-
source/libnormaliz/matrix.cpp | 550 +-
source/libnormaliz/matrix.h | 69 +-
source/libnormaliz/nmz_integral.cpp | 41 +-
.../libnormaliz/{bottom.h => other_algorithms.cpp} | 28 +-
source/libnormaliz/{bottom.h => primal.cpp} | 28 +-
.../{cone_helper.cpp => project_and_lift.cpp} | 207 +-
.../{cone_helper.h => project_and_lift.h} | 56 +-
source/libnormaliz/reduction.cpp | 20 +
source/libnormaliz/simplex.cpp | 43 +-
source/libnormaliz/simplex.h | 6 +-
source/libnormaliz/sublattice_representation.cpp | 84 +-
source/libnormaliz/sublattice_representation.h | 184 +-
source/libnormaliz/vector_operations.cpp | 734 +-
source/libnormaliz/vector_operations.h | 497 +-
source/maxsimplex/CMakeLists.txt | 4 +-
source/maxsimplex/Makefile.classic | 2 +-
source/normaliz.cpp | 28 +-
source/options.cpp | 3 +
source/outerpar/outerpar.cpp | 28 +
source/output.cpp | 61 +-
test/Makefile.am | 45 +-
test/Makefile.classic | 30 +-
test/test-/3x3_sign.ref | 12 +-
test/test-/3x3_sign2.ref | 12 +-
test/test-/3x3magiceven.ref | 20 +-
test/test-/4x4.in | 12 +-
test/test-/4x4.ref | 18 +-
test/test-/4x4gen.ref | 16 +-
test/test-/CondParSymmSemi.in | 3 +-
test/test-/CondParSymmSemi.ref | 53 +
test/test-/Fact_wrt_dual_error.ref | 4 +-
test/test-/Frol_high_6_1024Null5_6.in | 20 +
test/test-/Frol_high_6_1024Null5_6.ref | 6068 +++++
test/test-/Thierry.in | 3 +-
test/test-/Thierry.ref | 2 +
test/test-/ThierryNoProjection.ref | 12 +-
test/test-/binom.ref | 8 +-
test/test-/diagonal.in | 5 +
test/{test-v/mode45.ref => test-/diagonal.ref} | 25 +-
test/test-/euclid.in | 8 +
.../latt_id_nonpointed.ref => test-/euclid.ref} | 30 +-
test/test-/gen_inhom_nonpointed.ref | 2 +-
test/test-/gen_nonpointed.ref | 2 +-
test/test-/inhom_eq.ref | 12 +-
test/test-/knapsack_11_60_test2.ref | 14 +-
test/test-/latt_id_nonpointed.ref | 2 +-
test/test-/lattice_ideal.ref | 10 +-
test/test-/lowrank.ref | 36 +-
test/test-/lowrankPF.in | 2 +
test/test-/lowrankPF.ref | 36 +-
test/test-/normface.ref | 2 +-
test/test-/polyhedron.ref | 6 +-
test/test-/subspace4_inhom.ref | 2 +-
test/test-/test22dual.ref | 36 +-
test/test-1/3x3magic.ref | 12 +-
test/test-1/Fact_wrt_dual_error_hom.ref | 4 +-
test/test-1/gen_nonpointed.ref | 2 +-
test/test-1/latt_id_nonpointed.ref | 2 +-
test/test-1/lattice_ideal.ref | 10 +-
test/test-1/lowrank.ref | 36 +-
test/test-Int/Condorcet-q.in | 1 +
test/test-Int/Condorcet-q.ref | 53 +
test/test-Int/rational-E.in | 1 +
test/test-Int/rational-E.ref | 15 +-
test/test-Int/zero-E.ref | 1 -
test/{test-nn => test-Scip}/hickerson-16.in | 10 +-
test/{test- => test-Scip}/hickerson-16.ref | 0
test/{test- => test-Scip}/hickerson-16plus1.in | 4 +-
test/{test- => test-Scip}/hickerson-16plus1.ref | 0
{example => test/test-Scip}/knapsack_11_60.in | 0
test/test-Scip/knapsack_11_60.ref | 25639 +++++++++++++++++++
test/{test- => test-Special}/5x5PF.in | 0
test/{test- => test-Special}/5x5PF.ref | 50 +-
test/test-d/3x3magic.ref | 12 +-
test/test-d/4x4.ref | 16 +-
test/test-d/5x5.ref | 22 +-
test/test-d/Fact_wrt_dual_error.ref | 4 +-
test/test-d/dual-inhom-not-pointed.ref | 4 +-
test/test-d/gen_inhom_nonpointed.ref | 2 +-
test/test-d/gen_nonpointed.ref | 2 +-
test/test-d/hyperplanes-not-pointed.ref | 6 +-
test/test-d/inhom_eq.ref | 12 +-
test/test-d/latt_id_nonpointed.ref | 2 +-
test/test-d/normface.ref | 2 +-
test/test-d1/Fact_wrt_dual_error_hom.ref | 4 +-
test/test-d1/gen_nonpointed.ref | 2 +-
test/test-d1/hyperplanes-not-pointed.ref | 6 +-
test/test-d1/latt_id_nonpointed.ref | 2 +-
test/test-h/3x3_sign.ref | 12 +-
test/test-h/3x3_sign2.ref | 12 +-
test/test-h/3x3magiceven.ref | 20 +-
test/test-h/4x4.ref | 16 +-
test/test-h/4x4gen.ref | 16 +-
test/test-h/binom.ref | 8 +-
test/test-h/gen_nonpointed.ref | 2 +-
test/test-h/latt_id_nonpointed.ref | 2 +-
test/test-h/lattice_ideal.ref | 10 +-
test/test-h/lowrank.ref | 36 +-
test/test-h/normface.ref | 2 +-
test/test-h/test22dual.ref | 36 +-
test/test-hh/rational.IntHull.ref | 2 +-
test/test-mm/4x4gen.ref | 16 +-
test/test-mm/binom.ref | 8 +-
test/test-mm/gen_nonpointed.ref | 2 +-
test/test-mm/lattice_ideal.ref | 12 +-
test/test-mm/lowrank.ref | 36 +-
test/test-mm/normface.ref | 2 +-
test/test-mm/test22dual.ref | 36 +-
test/test-n/gen_nonpointed.ref | 2 +-
test/test-n/latt_id_nonpointed.ref | 2 +-
test/test-n/lattice_ideal.ref | 10 +-
test/test-n/normface.ref | 2 +-
test/test-nn/2equation_large_simplex.ref | 18 +-
test/test-nn/Fact_wrt_dual_error.ref | 4 +-
test/test-nn/binom.ref | 8 +-
test/test-nn/gen_inhom_nonpointed.ref | 2 +-
test/test-nn/gen_nonpointed.ref | 2 +-
test/test-nn/hyperplanes-not-pointed.ref | 6 +-
test/test-nn/latt_id_nonpointed.ref | 2 +-
test/test-nn/lattice_ideal.ref | 10 +-
test/test-nn/lowrank.ref | 36 +-
test/test-nn/normface.ref | 2 +-
test/test-nn/subspace4_inhom.ref | 2 +-
test/test-p/binom.ref | 8 +-
test/test-p/bugHpoly.ref | 32 +-
test/test-p/gen_nonpointed.ref | 2 +-
test/test-p/latt_id_nonpointed.ref | 2 +-
test/test-p/lattice_ideal.ref | 10 +-
test/test-p/lowrank.ref | 36 +-
.../nonpointed.ProjectCone.ref} | 19 +-
test/test-pr/nonpointed.in | 9 +
.../halfspace2.ref => test-pr/nonpointed.ref} | 23 +-
.../polyhedron.ProjectCone.ref} | 14 +-
test/test-pr/polyhedron.in | 9 +
.../zero_polyhedron.ref => test-pr/polyhedron.ref} | 1 +
test/test-pr/small_proj.ProjectCone.ref | 43 +
test/{test-/smallPF.in => test-pr/small_proj.in} | 4 +-
test/test-pr/small_proj.ref | 9 +
test/test-pr/small_proj_inhom.ProjectCone.ref | 44 +
.../smallPF.in => test-pr/small_proj_inhom.in} | 8 +-
.../small_proj_inhom.ref} | 5 +-
test/test-pr/small_sh_proj.ProjectCone.ref | 43 +
.../small-sh.in => test-pr/small_sh_proj.in} | 6 +-
.../small-sh.ref => test-pr/small_sh_proj.ref} | 0
test/test-pr/small_sh_proj_inhom.ProjectCone.ref | 44 +
.../small-sh.in => test-pr/small_sh_proj_inhom.in} | 10 +-
.../small.ref => test-pr/small_sh_proj_inhom.ref} | 25 +-
test/test-q/bugHpoly.ref | 32 +-
test/test-q/gen_nonpointed.ref | 2 +-
test/test-q/latt_id_nonpointed.ref | 2 +-
test/test-q/lattice_ideal.ref | 10 +-
test/test-q/lowrank.ref | 36 +-
test/test-r1/3x3magic.ref | 12 +-
test/test-r1/4x4.ref | 16 +-
test/test-r1/gen_nonpointed.ref | 2 +-
test/test-r1/hyperplanes-not-pointed.ref | 6 +-
test/test-r1/latt_id_nonpointed.ref | 2 +-
test/test-r1/lowrank.ref | 36 +-
test/test-s/3x3_sign.ref | 12 +-
test/test-s/3x3magiceven.ref | 20 +-
test/test-s/binom.ref | 8 +-
test/test-s/gen_inhom_nonpointed.ref | 2 +-
test/test-s/gen_nonpointed.ref | 2 +-
test/test-s/hyperplanes-not-pointed.ref | 6 +-
test/test-s/latt_id_nonpointed.ref | 2 +-
test/test-s/lattice_ideal.ref | 10 +-
test/test-s/lowrank.ref | 36 +-
test/test-s/small.ref | 380 +-
test/test-s/subspace4_inhom.ref | 2 +-
test/test-v/binom.ref | 8 +-
test/test-v/gen_nonpointed.ref | 2 +-
test/test-v/latt_id_nonpointed.ref | 2 +-
test/test-v/lattice_ideal.ref | 10 +-
test/test-v/lowrank.ref | 36 +-
test/test-w/binom.ref | 8 +-
test/test-w/gen_nonpointed.ref | 2 +-
test/test-w/latt_id_nonpointed.ref | 2 +-
test/test-w/lattice_ideal.ref | 10 +-
test/test-w/lowrank.ref | 36 +-
245 files changed, 43951 insertions(+), 3062 deletions(-)
delete mode 100644 PyNormaliz/.gitignore
delete mode 100755 PyNormaliz/.travis-install.sh
delete mode 100755 PyNormaliz/.travis-test.sh
delete mode 100644 PyNormaliz/.travis.yml
delete mode 100644 PyNormaliz/Makefile
copy PyNormaliz/examples/{first.py => first_rational.py} (84%)
create mode 100644 PyNormaliz/examples/j462.py
delete mode 100644 README.md
create mode 100644 debian/README.Debian
delete mode 100644 debian/patches/upstream-test-extremely_sensitive_tests-neutralize.patch
create mode 100644 doc/Normaliz.tex
delete mode 100644 example/ChF_16_1048576.in
copy test/test-Int/Condorcet-q.in => example/CondorcetExpansion.in (93%)
copy test/test-Int/Condorcet-q.in => example/CondorcetRange.in (65%)
create mode 100644 example/VdM_16_1048576.in
create mode 100644 example/euclid.in
copy test/test-/smallPF.in => example/small_proj.in (98%)
copy test/test-/smallPF.in => example/small_proj_inhom.in (97%)
copy test/test-s/small-sh.in => example/small_sh_proj.in (92%)
copy test/test-s/small-sh.in => example/small_sh_proj_inhom.in (88%)
create mode 100644 source/cmake/Modules/FindFLINT.cmake
create mode 100644 source/cmake/Modules/FindMPFR.cmake
copy source/libnormaliz/{bottom.h => cone_and_control.cpp} (75%)
copy source/libnormaliz/{nmz_integrate.cpp => enumeration.cpp} (76%)
delete mode 100644 source/libnormaliz/libnormaliz-templated.cpp
copy source/libnormaliz/{bottom.h => linear_algebra.cpp} (75%)
copy source/libnormaliz/{bottom.h => other_algorithms.cpp} (75%)
copy source/libnormaliz/{bottom.h => primal.cpp} (75%)
rename source/libnormaliz/{cone_helper.cpp => project_and_lift.cpp} (83%)
rename source/libnormaliz/{cone_helper.h => project_and_lift.h} (68%)
create mode 100644 test/test-/Frol_high_6_1024Null5_6.in
create mode 100644 test/test-/Frol_high_6_1024Null5_6.ref
create mode 100644 test/test-/diagonal.in
copy test/{test-v/mode45.ref => test-/diagonal.ref} (66%)
create mode 100644 test/test-/euclid.in
copy test/{test-q/latt_id_nonpointed.ref => test-/euclid.ref} (74%)
copy test/{test-nn => test-Scip}/hickerson-16.in (86%)
copy test/{test- => test-Scip}/hickerson-16.ref (100%)
copy test/{test- => test-Scip}/hickerson-16plus1.in (90%)
copy test/{test- => test-Scip}/hickerson-16plus1.ref (100%)
copy {example => test/test-Scip}/knapsack_11_60.in (100%)
create mode 100644 test/test-Scip/knapsack_11_60.ref
rename test/{test- => test-Special}/5x5PF.in (100%)
rename test/{test- => test-Special}/5x5PF.ref (66%)
copy test/{test-s/gen_nonpointed.ref => test-pr/nonpointed.ProjectCone.ref} (70%)
create mode 100644 test/test-pr/nonpointed.in
copy test/{test-s/halfspace2.ref => test-pr/nonpointed.ref} (63%)
copy test/{test-s/ChineseRemainder.ref => test-pr/polyhedron.ProjectCone.ref} (83%)
create mode 100644 test/test-pr/polyhedron.in
copy test/{test-mm/zero_polyhedron.ref => test-pr/polyhedron.ref} (86%)
create mode 100644 test/test-pr/small_proj.ProjectCone.ref
copy test/{test-/smallPF.in => test-pr/small_proj.in} (98%)
create mode 100644 test/test-pr/small_proj.ref
create mode 100644 test/test-pr/small_proj_inhom.ProjectCone.ref
copy test/{test-/smallPF.in => test-pr/small_proj_inhom.in} (97%)
copy test/{test-mm/zero_polyhedron.ref => test-pr/small_proj_inhom.ref} (62%)
create mode 100644 test/test-pr/small_sh_proj.ProjectCone.ref
copy test/{test-s/small-sh.in => test-pr/small_sh_proj.in} (92%)
copy test/{test-s/small-sh.ref => test-pr/small_sh_proj.ref} (100%)
create mode 100644 test/test-pr/small_sh_proj_inhom.ProjectCone.ref
copy test/{test-s/small-sh.in => test-pr/small_sh_proj_inhom.in} (88%)
copy test/{test-v/small.ref => test-pr/small_sh_proj_inhom.ref} (92%)
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