[r-cran-vgam] 52/63: Import Debian patch 1.0-2-1
Andreas Tille
tille at debian.org
Tue Jan 24 13:54:40 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-vgam.
commit d1da1892eb66502eba71540e3387a1b5e7a86832
Merge: 7777ffc 6723110
Author: Chris Lawrence <lawrencc at debian.org>
Date: Tue Aug 16 20:57:27 2016 -0400
Import Debian patch 1.0-2-1
BUGS | 16 +-
DESCRIPTION | 13 +-
MD5 | 424 +--
NAMESPACE | 52 +-
NEWS | 58 +
R/Links.R | 4 +-
R/aamethods.q | 9 +-
R/add1.vglm.q | 7 -
R/attrassign.R | 36 +-
R/bAIC.q | 2 +-
R/build.terms.vlm.q | 8 +-
R/calibrate.q | 4 +-
R/cao.R | 12 +-
R/cao.fit.q | 124 +-
R/coef.vlm.q | 4 +-
R/confint.vlm.R | 20 +-
R/cqo.R | 8 +-
R/cqo.fit.q | 39 +-
R/deviance.vlm.q | 4 +-
R/effects.vglm.q | 2 +-
R/family.actuary.R | 1219 ++++---
R/family.aunivariate.R | 1064 +++++-
R/family.basics.R | 182 +-
R/family.binomial.R | 145 +-
R/family.bivariate.R | 182 +-
R/family.categorical.R | 196 +-
R/family.censored.R | 54 +-
R/family.circular.R | 31 +-
R/family.exp.R | 10 +-
R/family.extremes.R | 1444 ++++----
R/family.functions.R | 3 +-
R/family.genetic.R | 45 +-
R/family.glmgam.R | 67 +-
R/family.loglin.R | 4 +-
R/family.math.R | 10 +-
R/family.mixture.R | 26 +-
R/family.nonlinear.R | 12 +-
R/family.normal.R | 311 +-
R/family.others.R | 463 ++-
R/family.positive.R | 383 ++-
R/family.qreg.R | 376 +-
R/family.rcim.R | 26 +-
R/family.rcqo.R | 16 +-
R/family.robust.R | 18 +-
R/family.rrr.R | 172 +-
R/family.sur.R | 8 +-
R/family.survival.R | 24 +-
R/family.ts.R | 1051 +++---
R/family.univariate.R | 1585 +++------
R/family.vglm.R | 4 +-
R/family.zeroinf.R | 5695 +++++++++++++++++++------------
R/fittedvlm.R | 2 +-
R/formula.vlm.q | 2 +-
R/generic.q | 2 +-
R/links.q | 24 +-
R/logLik.vlm.q | 2 +-
R/lrwaldtest.R | 8 +-
R/model.matrix.vglm.q | 184 +-
R/mux.q | 14 +-
R/nobs.R | 2 +-
R/penvps.R | 139 +
R/{plot.vglm.q => plot.vgam.R} | 120 +-
R/plot.vglm.R | 106 +
R/predict.vgam.q | 7 +-
R/predict.vglm.q | 8 +-
R/predict.vlm.q | 20 +-
R/print.vglm.q | 8 +-
R/print.vlm.q | 2 +-
R/psfun.R | 183 +
R/psv2magic.R | 97 +
R/qrrvglm.control.q | 13 +-
R/qtplot.q | 27 +-
R/residuals.vlm.q | 8 +-
R/rrvglm.R | 13 +-
R/rrvglm.control.q | 2 +-
R/rrvglm.fit.q | 17 +-
R/s.q | 2 +-
R/s.vam.q | 14 +-
R/simulate.vglm.R | 17 +-
R/smart.R | 8 +-
R/step.vglm.q | 17 -
R/summary.vgam.q | 4 +-
R/summary.vglm.q | 2 +-
R/summary.vlm.q | 4 +-
R/vgam.R | 133 +-
R/vgam.control.q | 10 +-
R/vgam.fit.q | 131 +-
R/vgam.match.q | 8 +-
R/vglm.R | 17 +-
R/vglm.control.q | 2 +-
R/vglm.fit.q | 273 +-
R/vlm.R | 4 +-
R/vlm.wfit.q | 138 +-
R/vsmooth.spline.q | 40 +-
build/vignette.rds | Bin 480 -> 478 bytes
data/Huggins89.t1.rda | Bin 443 -> 442 bytes
data/Huggins89table1.rda | Bin 445 -> 444 bytes
data/alclevels.rda | Bin 551 -> 549 bytes
data/alcoff.rda | Bin 548 -> 546 bytes
data/auuc.rda | Bin 246 -> 244 bytes
data/backPain.rda | Bin 474 -> 480 bytes
data/beggs.rda | Bin 198 -> 196 bytes
data/car.all.rda | Bin 6968 -> 6959 bytes
data/cfibrosis.rda | Bin 264 -> 263 bytes
data/corbet.rda | Bin 244 -> 236 bytes
data/crashbc.rda | Bin 374 -> 374 bytes
data/crashf.rda | Bin 341 -> 340 bytes
data/crashi.rda | Bin 491 -> 489 bytes
data/crashmc.rda | Bin 385 -> 385 bytes
data/crashp.rda | Bin 376 -> 375 bytes
data/crashtr.rda | Bin 361 -> 360 bytes
data/deermice.rda | Bin 393 -> 393 bytes
data/ducklings.rda | Bin 561 -> 560 bytes
data/finney44.rda | Bin 210 -> 209 bytes
data/flourbeetle.rda | Bin 344 -> 342 bytes
data/hspider.rda | Bin 1344 -> 1343 bytes
data/lakeO.rda | Bin 335 -> 333 bytes
data/leukemia.rda | Bin 329 -> 328 bytes
data/marital.nz.rda | Bin 10432 -> 10492 bytes
data/melbmaxtemp.rda | Bin 4263 -> 4257 bytes
data/pneumo.rda | Bin 267 -> 266 bytes
data/prinia.rda | Bin 1229 -> 1228 bytes
data/ruge.rda | Bin 258 -> 254 bytes
data/toxop.rda | Bin 473 -> 472 bytes
data/venice.rda | Bin 981 -> 983 bytes
data/venice90.rda | Bin 8000 -> 8036 bytes
data/wine.rda | Bin 270 -> 270 bytes
debian/changelog | 6 +
debian/control | 2 +-
inst/doc/categoricalVGAM.pdf | Bin 645909 -> 646125 bytes
inst/doc/crVGAM.pdf | Bin 421544 -> 421526 bytes
man/AR1.Rd | 255 +-
man/AR1EIM.Rd | 303 ++
man/AR1UC.Rd | 14 +-
man/CommonVGAMffArguments.Rd | 22 +-
man/Select.Rd | 3 +-
man/VGAM-package.Rd | 19 +-
man/betaII.Rd | 3 +-
man/betaR.Rd | 1 +
man/betabinomUC.Rd | 45 +-
man/betaff.Rd | 3 +-
man/binom2.orUC.Rd | 18 +-
man/binormal.Rd | 2 +-
man/binormalUC.Rd | 2 +-
man/calibrate.qrrvglm.control.Rd | 2 +-
man/cens.gumbel.Rd | 2 +-
man/clo.Rd | 2 +-
man/cumulative.Rd | 3 +-
man/dagum.Rd | 4 +-
man/depvar.Rd | 2 +-
man/dirichlet.Rd | 9 +-
man/double.expbinomial.Rd | 2 +-
man/ducklings.Rd | 2 +-
man/fisk.Rd | 3 +-
man/gaussianff.Rd | 2 +-
man/gev.Rd | 119 +-
man/gevUC.Rd | 62 +-
man/gpd.Rd | 5 +-
man/gpdUC.Rd | 34 +-
man/gumbel.Rd | 25 +-
man/gumbelUC.Rd | 2 +-
man/guplot.Rd | 2 +-
man/huber.Rd | 2 +-
man/huberUC.Rd | 2 +-
man/identitylink.Rd | 2 +-
man/inv.paralogistic.Rd | 2 +-
man/linkfun.Rd | 2 +-
man/logc.Rd | 4 +-
man/loge.Rd | 2 +-
man/logoff.Rd | 2 +-
man/lomax.Rd | 3 +-
man/marital.nz.Rd | 2 +-
man/melbmaxtemp.Rd | 2 +-
man/multilogit.Rd | 2 +-
man/multinomial.Rd | 21 +-
man/nbcanlink.Rd | 2 +-
man/negbinomial.Rd | 110 +-
man/negbinomial.size.Rd | 4 +-
man/normal.vcm.Rd | 17 +-
man/notdocumentedyet.Rd | 35 +-
man/oiposbinomUC.Rd | 121 +
man/oipospoisUC.Rd | 116 +
man/oipospoisson.Rd | 91 +
man/oxtemp.Rd | 2 +-
man/paralogistic.Rd | 3 +-
man/plotrcim0.Rd | 9 +-
man/plotvgam.Rd | 2 +-
man/plotvglm.Rd | 99 +-
man/poissonff.Rd | 2 +-
man/posbinomUC.Rd | 6 +-
man/posgeomUC.Rd | 2 +-
man/posnegbinUC.Rd | 9 +
man/posnegbinomial.Rd | 17 +-
man/pospoisUC.Rd | 7 +-
man/pospoisson.Rd | 4 +-
man/ps.Rd | 267 ++
man/qrrvglm.control.Rd | 6 +-
man/qtplot.gumbel.Rd | 7 +-
man/reciprocal.Rd | 2 +-
man/{rlplot.egev.Rd => rlplot.gevff.Rd} | 16 +-
man/rrvglm.control.Rd | 2 +-
man/rrvglm.optim.control.Rd | 2 +-
man/s.Rd | 17 +-
man/sinmad.Rd | 4 +-
man/trplot.qrrvglm.Rd | 6 +-
man/undocumented-methods.Rd | 2 +
man/vgam.Rd | 18 +-
man/vgam.control.Rd | 10 +-
man/vglm.Rd | 1 +
man/vglm.control.Rd | 4 +-
man/zanegbinomial.Rd | 47 +-
man/zapoisson.Rd | 4 +-
man/zetaff.Rd | 9 +-
man/zibinomUC.Rd | 17 +-
man/zibinomial.Rd | 4 +-
man/zinegbinomial.Rd | 35 +-
man/zipebcom.Rd | 9 +-
man/zipoisUC.Rd | 5 +-
man/zipoisson.Rd | 40 +-
man/zoabetaR.Rd | 107 +
man/{ozibetaUC.Rd => zoabetaUC.Rd} | 75 +-
221 files changed, 12213 insertions(+), 7695 deletions(-)
diff --cc debian/changelog
index db19a56,0000000..6db0c03
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,177 -1,0 +1,183 @@@
++r-cran-vgam (1.0-2-1) unstable; urgency=medium
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Tue, 16 Aug 2016 20:57:27 -0400
++
+r-cran-vgam (1.0-1-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 23 Mar 2016 21:27:04 -0400
+
+r-cran-vgam (1.0-0-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 09 Nov 2015 23:29:07 -0500
+
+r-cran-vgam (0.9-8-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 14 Jul 2015 20:07:40 -0400
+
+r-cran-vgam (0.9-7-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 08 Mar 2015 17:34:16 -0400
+
+r-cran-vgam (0.9-6-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 08 Dec 2014 19:14:01 -0500
+
+r-cran-vgam (0.9-5-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 13 Nov 2014 10:05:58 -0500
+
+r-cran-vgam (0.9-4-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 28 May 2014 18:37:59 -0400
+
+r-cran-vgam (0.9-3-1) unstable; urgency=medium
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 25 Feb 2014 20:46:50 -0500
+
+r-cran-vgam (0.9-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 27 Apr 2013 21:40:01 -0400
+
+r-cran-vgam (0.9-0-1) unstable; urgency=low
+
+ * New upstream release.
+ * Rebuild for R 3.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 31 Mar 2013 21:00:19 -0400
+
+r-cran-vgam (0.8-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 13 May 2012 22:32:15 -0400
+
+r-cran-vgam (0.8-6-1) unstable; urgency=low
+
+ * New upstream release; fixes FTBFS. (Closes: #665250)
+ + Upstream now requires R >= 2.14; build dependencies updated accordingly.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 22 Mar 2012 13:44:59 -0400
+
+r-cran-vgam (0.8-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 04 Nov 2011 13:13:06 -0400
+
+r-cran-vgam (0.8-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 17 Jul 2011 16:20:26 -0500
+
+r-cran-vgam (0.8-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 20 Feb 2011 15:37:31 -0600
+
+r-cran-vgam (0.8-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 07 Jul 2010 03:44:27 -0500
+
+r-cran-vgam (0.7-10-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 30 Mar 2010 21:21:11 -0500
+
+r-cran-vgam (0.7-9-1) unstable; urgency=low
+
+ * New upstream release.
+ * Update debian/watch.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 10 Jul 2009 21:27:58 -0500
+
+r-cran-vgam (0.7-8-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 16 Mar 2009 22:22:19 -0500
+
+r-cran-vgam (0.7-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 29 May 2008 06:51:02 -0500
+
+r-cran-vgam (0.7-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Mar 2008 02:04:58 -0500
+
+r-cran-vgam (0.7-5-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 06 Dec 2007 19:19:56 -0600
+
+r-cran-vgam (0.7-4-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 07 Oct 2007 20:16:15 -0500
+
+r-cran-vgam (0.7-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 14 Jun 2007 14:04:29 -0500
+
+r-cran-vgam (0.7-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 4 Feb 2007 15:28:54 -0600
+
+r-cran-vgam (0.7-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * First upload to unstable, since VGAM is now GPL'd (yeay!).
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 26 Oct 2006 22:05:10 -0500
+
+r-other-yee-vgam (0.6-9-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Jun 2006 20:39:52 -0400
+
+r-other-yee-vgam (0.6-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Jul 2005 02:42:23 -0500
+
+r-other-yee-vgam (0.5-19-1) unstable; urgency=low
+
+ * Initial Debian Release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 19 Apr 2004 19:12:44 -0500
diff --cc debian/control
index ea2e681,0000000..f344c31
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,24 -1,0 +1,24 @@@
+Source: r-cran-vgam
+Section: gnu-r
+Priority: optional
+Maintainer: Chris Lawrence <lawrencc at debian.org>
+Build-Depends: debhelper (>> 9), r-base-dev (>= 3.0), cdbs, dpkg-dev (>= 1.16.1~)
- Standards-Version: 3.9.6
++Standards-Version: 3.9.8
+Homepage: http://www.stat.auckland.ac.nz/~yee/VGAM/
+
+Package: r-cran-vgam
+Architecture: any
+Depends: ${R:Depends}, ${shlibs:Depends}, ${misc:Depends}
+Enhances: r-cran-zelig
+Description: GNU R package for estimating vector generalized additive models
+ This package implements a variety of functions for estimating vector
+ generalized additive models (VGAMs), as well as vector generalized
+ linear models (VGLMs), reduced-rank VGLMs, and quadratic reduced-rank
+ VGLMs.
+ .
+ Specific models that can be fit include a wide variety of
+ categorical-response models (with nominal and ordinal dependent
+ variables), bivariate binary-response models (bivariate
+ logit/probit), and seemingly-unrelated regressions. The package also
+ includes a number of standard and non-standard distribution functions
+ of use to statisticians.
--
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