[r-cran-caret] 01/03: Merge tag 'upstream/6.0-76+dfsg1'
Andreas Tille
tille at debian.org
Thu Sep 7 09:31:13 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-caret.
commit c8cdeace5936004bee2d22f9a01c7bed5427bb8c
Merge: 3b269a9 8b08689
Author: Andreas Tille <tille at debian.org>
Date: Thu Sep 7 11:23:41 2017 +0200
Merge tag 'upstream/6.0-76+dfsg1'
Upstream version 6.0-76+dfsg1
DESCRIPTION | 9 +-
MD5 | 273 +++++++++---------
NAMESPACE | 4 +
R/aaa.R | 3 +
R/confusionMatrix.R | 5 +-
R/createDataPartition.R | 81 +++---
R/createModel.R | 4 +-
R/dummyVar.R | 55 +++-
R/filterVarImp.R | 3 +-
R/gafs.R | 12 +-
R/ggplot.R | 9 +-
R/misc.R | 320 +++++++++++----------
R/modelLookup.R | 2 +-
R/postResample.R | 101 ++++---
R/preProcess.R | 20 +-
R/predict.train.R | 4 +
R/print.train.R | 7 +-
R/rfe.R | 21 +-
R/safs.R | 33 ++-
R/selectByFilter.R | 10 +-
R/selection.R | 2 +-
R/train.default.R | 489 +++++++++++++++++---------------
R/trainControl.R | 43 ++-
R/varImp.R | 20 +-
R/workflows.R | 202 ++++++++++---
build/vignette.rds | Bin 225 -> 226 bytes
inst/NEWS.Rd | 32 ++-
inst/doc/caret.R | 1 +
inst/doc/caret.Rnw | 1 -
inst/models/models.RData | Bin 2324347 -> 93745 bytes
inst/models/sampling.RData | Bin 1030 -> 4566 bytes
man/BloodBrain.Rd | 1 -
man/BoxCoxTrans.Rd | 17 +-
man/GermanCredit.Rd | 1 -
man/Sacramento.Rd | 1 -
man/as.matrix.confusionMatrix.Rd | 1 -
man/avNNet.Rd | 16 +-
man/bag.Rd | 20 +-
man/bagEarth.Rd | 14 +-
man/bagFDA.Rd | 14 +-
man/calibration.Rd | 19 +-
man/caret-internal.Rd | 37 ++-
man/caretFuncs.Rd | 23 +-
man/caretSBF.Rd | 19 +-
man/cars.Rd | 1 -
man/classDist.Rd | 13 +-
man/confusionMatrix.Rd | 15 +-
man/confusionMatrix.train.Rd | 9 +-
man/cox2.Rd | 1 -
man/createDataPartition.Rd | 49 ++--
man/densityplot.rfe.Rd | 11 +-
man/dhfr.Rd | 1 -
man/diff.resamples.Rd | 15 +-
man/dotPlot.Rd | 7 +-
man/dotplot.diff.resamples.Rd | 11 +-
man/downSample.Rd | 1 -
man/dummyVars.Rd | 62 ++--
man/featurePlot.Rd | 1 -
man/filterVarImp.Rd | 1 -
man/findCorrelation.Rd | 7 +-
man/findLinearCombos.Rd | 7 +-
man/format.bagEarth.Rd | 1 -
man/gafs.default.Rd | 17 +-
man/gafs_initial.Rd | 31 +-
man/getSamplingInfo.Rd | 1 -
man/histogram.train.Rd | 9 +-
man/icr.formula.Rd | 15 +-
man/index2vec.Rd | 1 -
man/knn3.Rd | 7 +-
man/knnreg.Rd | 8 +-
man/learing_curve_dat.Rd | 7 +-
man/lift.Rd | 18 +-
man/maxDissim.Rd | 13 +-
man/mdrr.Rd | 1 -
man/modelLookup.Rd | 13 +-
man/models.Rd | 41 ++-
man/nearZeroVar.Rd | 7 +-
man/nullModel.Rd | 7 +-
man/oil.Rd | 3 +-
man/oneSE.Rd | 12 +-
man/panel.lift2.Rd | 9 +-
man/panel.needle.Rd | 7 +-
man/pcaNNet.Rd | 18 +-
man/plot.gafs.Rd | 7 +-
man/plot.rfe.Rd | 12 +-
man/plot.train.Rd | 20 +-
man/plot.varImp.train.Rd | 10 +-
man/plotClassProbs.Rd | 1 -
man/plotObsVsPred.Rd | 1 -
man/plsda.Rd | 13 +-
man/postResample.Rd | 19 +-
man/pottery.Rd | 1 -
man/prcomp.resamples.Rd | 22 +-
man/preProcess.Rd | 17 +-
man/predict.bagEarth.Rd | 7 +-
man/predict.gafs.Rd | 7 +-
man/predict.knn3.Rd | 1 -
man/predict.knnreg.Rd | 1 -
man/predict.train.Rd | 14 +-
man/predictors.Rd | 7 +-
man/print.confusionMatrix.Rd | 7 +-
man/print.train.Rd | 7 +-
man/recall.Rd | 23 +-
man/resampleHist.Rd | 7 +-
man/resampleSummary.Rd | 7 +-
man/resamples.Rd | 25 +-
man/rfe.Rd | 26 +-
man/rfeControl.Rd | 11 +-
man/safs.Rd | 31 +-
man/safsControl.Rd | 20 +-
man/safs_initial.Rd | 22 +-
man/sbf.Rd | 26 +-
man/sbfControl.Rd | 9 +-
man/scat.Rd | 1 -
man/segmentationData.Rd | 1 -
man/sensitivity.Rd | 29 +-
man/spatialSign.Rd | 9 +-
man/summary.bagEarth.Rd | 2 +-
man/tecator.Rd | 3 +-
man/train.Rd | 59 ++--
man/trainControl.Rd | 40 ++-
man/twoClassSim.Rd | 13 +-
man/update.safs.Rd | 9 +-
man/update.train.Rd | 7 +-
man/varImp.Rd | 68 +++--
man/varImp.gafs.Rd | 7 +-
man/var_seq.Rd | 1 -
man/xyplot.resamples.Rd | 28 +-
src/caret.c | 1 +
tests/testthat/test_classDist.R | 99 +++++++
tests/testthat/test_data_spliting.R | 21 ++
tests/testthat/test_gafs.R | 40 +++
tests/testthat/test_ggplot.R | 61 ++++
tests/testthat/test_minimal.R | 24 +-
tests/testthat/test_misc.R | 44 +++
tests/testthat/test_multiclassSummary.R | 23 ++
tests/testthat/test_safs.R | 49 ++++
tests/testthat/test_sampling_options.R | 29 ++
tests/testthat/test_spatialSign.R | 40 +++
tests/testthat/test_twoClassSummary.R | 2 +-
tests/testthat/test_varImp.R | 25 ++
141 files changed, 2250 insertions(+), 1273 deletions(-)
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