[r-cran-bayesm] 42/44: Import Debian patch 3.0-2-1
Andreas Tille
tille at debian.org
Thu Sep 7 11:16:24 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-bayesm.
commit 9b578a287bac536de0357e17add302989fe22642
Merge: 4dd0ca2 7886232
Author: Chris Lawrence <lawrencc at debian.org>
Date: Tue Jul 14 19:54:30 2015 -0400
Import Debian patch 3.0-2-1
DESCRIPTION | 64 +-
MD5 | 257 ++++---
NAMESPACE | 23 +-
R/BayesmConstants.R | 32 +
R/BayesmFunctions.R | 1 +
R/breg.R | 25 -
R/cgetC.R | 14 -
R/clusterMix.R | 131 ----
R/clusterMix_rcpp.R | 60 ++
R/createX.R | 143 ++--
R/ghkvec.R | 12 -
R/llmnl.R | 26 -
R/llnhlogit.R | 9 +-
R/lndIChisq.R | 11 -
R/lndIWishart.R | 31 -
R/lndMvn.R | 16 -
R/lndMvst.R | 19 -
R/mnpProb.R | 9 +-
R/plot.bayesm.hcoef.R | 89 +--
R/plot.bayesm.mat.R | 117 +--
R/rDPGibbs.R | 569 ---------------
R/rbayesBLP_rcpp.R | 289 ++++++++
R/rbiNormGibbs.R | 235 +++---
R/{rbprobitGibbs.R => rbprobitgibbs_rcpp.r} | 275 +++----
R/rcppexports.r | 151 ++++
R/rdirichlet.R | 12 -
R/rdpgibbs_rcpp.r | 172 +++++
R/rhierBinLogit.R | 455 ++++++------
R/rhierLinearMixture.R | 341 ---------
R/rhierLinearMixture_rcpp.r | 214 ++++++
R/{rhierLinearModel.R => rhierLinearModel_rcpp.R} | 135 +---
R/rhierMnlDP.R | 807 ---------------------
R/rhierMnlDP_rcpp.r | 296 ++++++++
...hierMnlRwMixture.R => rhierMnlRwMixture_rcpp.r} | 207 ++----
R/{rhierNegbinRw.R => rhiernegbinrw_rcpp.r} | 587 +++++++--------
R/rivDP.R | 699 ------------------
R/rivDP_rcpp.R | 279 +++++++
R/{rivGibbs.R => rivGibbs_rcpp.R} | 388 ++++------
R/rmixGibbs.R | 87 ---
R/rmixture.R | 36 -
R/{rmnlIndepMetrop.R => rmnlIndepMetrop_rcpp.R} | 301 ++++----
R/{rmnpGibbs.R => rmnpgibbs_rcpp.r} | 335 ++++-----
R/rmultireg.R | 56 --
R/rmvpGibbs.R | 202 ------
R/rmvpgibbs_rcpp.r | 123 ++++
R/rmvst.R | 8 -
R/{rnegbinRw.R => rnegbinrw_rcpp.r} | 376 ++++------
R/{rnmixGibbs.R => rnmixgibbs_rcpp.r} | 372 +++++-----
R/{rordprobitGibbs.R => rordprobitgibbs_rcpp.r} | 472 +++++-------
R/rscaleUsage.R | 446 ------------
R/rscaleusage_rcpp.r | 254 +++++++
R/{rsurGibbs.R => rsurgibbs_rcpp.r} | 349 +++++----
R/rtrun.R | 11 -
R/{runireg.R => runireg_rcpp.r} | 268 +++----
R/{runiregGibbs.R => runireggibbs_rcpp.r} | 266 +++----
R/rwishart.R | 30 -
R/simnhlogit.R | 14 +-
R/summary.bayesm.var.R | 2 +-
data/Scotch.rda | Bin 5884 -> 6101 bytes
data/bank.rda | Bin 19548 -> 19940 bytes
data/cheese.rda | Bin 63660 -> 63800 bytes
data/customerSat.rda | Bin 8992 -> 8760 bytes
data/datalist | 8 -
data/detailing.rda | Bin 35584 -> 33268 bytes
data/margarine.rda | Bin 23576 -> 23348 bytes
data/orangeJuice.rda | Bin 595416 -> 591712 bytes
data/tuna.rda | Bin 40076 -> 40040 bytes
debian/changelog | 6 +
debian/control | 2 +-
debian/rules | 3 -
inst/doc/Some_Useful_R_Pointers.pdf | Bin 598836 -> 0 bytes
inst/doc/Tips_On_Using_bayesm.pdf | Bin 54746 -> 0 bytes
inst/doc/bayesm-manual.pdf | Bin 359770 -> 0 bytes
inst/include/bayesm.h | 151 ++++
man/bank.Rd | 254 +++----
man/breg.Rd | 2 +-
man/cgetC.Rd | 2 +-
man/cheese.Rd | 166 ++---
man/clusterMix.Rd | 176 ++---
man/condMom.Rd | 2 +-
man/customerSat.Rd | 76 +-
man/detailing.Rd | 24 +-
man/eMixMargDen.Rd | 4 +-
man/ghkvec.Rd | 115 +--
man/llmnl.Rd | 2 +-
man/llnhlogit.Rd | 27 +-
man/lndIChisq.Rd | 8 +-
man/lndMvn.Rd | 2 +-
man/lndMvst.Rd | 4 +-
man/logMargDenNR.Rd | 70 +-
man/margarine.Rd | 52 +-
man/mixDen.Rd | 4 +-
man/mixDenBi.Rd | 4 +-
man/mnlHess.Rd | 88 +--
man/momMix.Rd | 2 +-
man/orangeJuice.Rd | 68 +-
man/plot.bayesm.hcoef.Rd | 2 +-
man/plot.bayesm.mat.Rd | 10 +-
man/plot.bayesm.nmix.Rd | 12 +-
man/rDPGibbs.Rd | 79 +-
man/rbayesBLP.Rd | 236 ++++++
man/rbiNormGibbs.Rd | 2 +-
man/rbprobitGibbs.Rd | 3 +-
man/rhierBinLogit.Rd | 6 +-
man/rhierLinearMixture.Rd | 308 ++++----
man/rhierLinearModel.Rd | 201 ++---
man/rhierMnlDP.Rd | 454 ++++++------
man/rhierMnlRwMixture.Rd | 366 +++++-----
man/rhierNegbinRw.Rd | 284 ++++----
man/rivDP.Rd | 64 +-
man/rivGibbs.Rd | 197 ++---
man/rmixGibbs.Rd | 3 +-
man/rmixture.Rd | 2 +-
man/rmnlIndepMetrop.Rd | 187 ++---
man/rmnpGibbs.Rd | 239 +++---
man/rmultireg.Rd | 8 +-
man/rmvpGibbs.Rd | 9 +-
man/rnegbinRw.Rd | 13 +-
man/rnmixGibbs.Rd | 13 +-
man/rordprobitGibbs.Rd | 231 +++---
man/rscaleUsage.Rd | 4 +-
man/rsurGibbs.Rd | 9 +-
man/runireg.Rd | 11 +-
man/runiregGibbs.Rd | 7 +-
man/rwishart.Rd | 2 +-
man/simnhlogit.Rd | 101 +--
man/summary.bayesm.mat.Rd | 9 +-
man/summary.bayesm.nmix.Rd | 2 +-
man/summary.bayesm.var.Rd | 4 +-
man/tuna.Rd | 222 +++---
src/Makevars | 2 +
src/Makevars.win | 2 +
src/bayesBLP_rcpp_loop.cpp | 508 +++++++++++++
src/bayesmc.c | 359 ---------
src/bayesmcpp.cpp | 81 ---
src/breg_rcpp.cpp | 23 +
src/cgetC_rcpp.cpp | 47 ++
src/clusterMix_rcpp_loop.cpp | 145 ++++
src/functionTiming.cpp | 30 +
src/ghkvec_rcpp.cpp | 196 +++++
src/llmnl_rcpp.cpp | 23 +
src/lndIChisq_rcpp.cpp | 12 +
src/lndIWishart_rcpp.cpp | 36 +
src/lndMvn_rcpp.cpp | 18 +
src/lndMvst_rcpp.cpp | 25 +
src/rDPGibbs_rcpp_loop.cpp | 168 +++++
src/rbprobitGibbs_rcpp_loop.cpp | 55 ++
src/rcppexports.cpp | 758 +++++++++++++++++++
src/rdirichlet_rcpp.cpp | 19 +
src/rhierLinearMixture_rcpp_loop.cpp | 120 +++
src/rhierLinearModel_rcpp_loop.cpp | 137 ++++
src/rhierMnlDP_rcpp_loop.cpp | 343 +++++++++
src/rhierMnlRwMixture_rcpp_loop.cpp | 119 +++
src/rhierNegbinRw_rcpp_loop.cpp | 169 +++++
src/rivDP_rcpp_loop.cpp | 426 +++++++++++
src/rivgibbs_rcpp_loop.cpp | 135 ++++
src/rmixGibbs_rcpp.cpp | 178 +++++
src/rmixture_rcpp.cpp | 65 ++
src/rmnlIndepMetrop_rcpp_loop.cpp | 63 ++
src/rmnpGibbs_rcpp_loop.cpp | 143 ++++
src/rmultireg_rcpp.cpp | 70 ++
src/rmvpGibbs_rcpp_loop.cpp | 135 ++++
src/rmvst_rcpp.cpp | 15 +
src/rnegbinRw_rcpp_loop.cpp | 98 +++
src/rnmixGibbs_rcpp_loop.cpp | 46 ++
src/rordprobitGibbs_rcpp_loop.cpp | 211 ++++++
src/rscaleUsage_rcpp_loop.cpp | 442 +++++++++++
src/rsurGibbs_rcpp_loop.cpp | 129 ++++
src/rtrun_rcpp.cpp | 17 +
src/runiregGibbs_rcpp_loop.cpp | 74 ++
src/runireg_rcpp_loop.cpp | 74 ++
src/rwishart_rcpp.cpp | 43 ++
src/thetadraw.c | 151 ----
src/utilityFunctions.cpp | 789 ++++++++++++++++++++
174 files changed, 13017 insertions(+), 9512 deletions(-)
diff --cc debian/changelog
index 50e2667,0000000..68313ab
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,121 -1,0 +1,127 @@@
++r-cran-bayesm (3.0-2-1) unstable; urgency=medium
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Tue, 14 Jul 2015 19:54:30 -0400
++
+r-cran-bayesm (2.2-5-1) unstable; urgency=low
+
+ * New upstream release.
+ * Rebuild for R 3.0.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 31 Mar 2013 20:16:20 -0400
+
+r-cran-bayesm (2.2-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 27 Feb 2011 19:10:54 -0600
+
+r-cran-bayesm (2.2-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 15 Jan 2011 11:27:59 -0600
+
+r-cran-bayesm (2.2-2-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 24 Jun 2008 12:22:35 -0500
+
+r-cran-bayesm (2.2-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Mar 2008 02:09:40 -0500
+
+r-cran-bayesm (2.2-0-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 07 Mar 2008 13:37:59 -0600
+
+r-cran-bayesm (2.1-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 22 Mar 2007 16:30:36 -0500
+
+r-cran-bayesm (2.0-9-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 20 Jan 2007 21:43:18 -0600
+
+r-cran-bayesm (2.0-8-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 19 Mar 2006 20:22:49 -0500
+
+r-cran-bayesm (2.0-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 13 Feb 2006 19:50:06 -0500
+
+r-cran-bayesm (2.0-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 25 Jan 2006 22:38:09 -0500
+
+r-cran-bayesm (2.0-5-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 11 Jan 2006 04:15:27 -0500
+
+r-cran-bayesm (2.0-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Dec 2005 09:04:51 -0500
+
+r-cran-bayesm (2.0-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 8 Oct 2005 19:54:18 -0400
+
+r-cran-bayesm (1.1-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 6 Jul 2005 13:50:55 -0500
+
+r-cran-bayesm (1.1-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 3 Jul 2005 20:18:37 -0500
+
+r-cran-bayesm (1.1-0-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 23 Jun 2005 11:03:25 -0500
+
+r-cran-bayesm (1.0-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 2 Jun 2005 19:28:50 -0500
+
+r-cran-bayesm (1.0-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * Modify debian/watch to point to cran.r-project.org.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 20 May 2005 16:45:23 -0500
+
+r-cran-bayesm (0.0-2-1) unstable; urgency=low
+
+ * Initial Debian Release. (Closes: #308255)
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 8 May 2005 20:07:30 -0500
diff --cc debian/control
index 1254fb5,0000000..1211471
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,29 -1,0 +1,29 @@@
+Source: r-cran-bayesm
+Section: gnu-r
+Priority: optional
+Maintainer: Chris Lawrence <lawrencc at debian.org>
+Build-Depends: debhelper (>> 9), r-base-dev (>= 3.0), cdbs, dpkg-dev (>= 1.16.1~)
- Standards-Version: 3.9.3
++Standards-Version: 3.9.6
+Homepage: http://www.perossi.org/home/bsm-1
+
+Package: r-cran-bayesm
+Architecture: any
+Depends: ${R:Depends}, ${shlibs:Depends}, ${misc:Depends}
+Description: GNU R package for Bayesian inference
+ The bayesm package covers many important models used in marketing and
+ micro-econometrics applications. The package includes:
+ .
+ * Bayes Regression (univariate or multivariate dep var)
+ * Multinomial Logit (MNL) and Multinomial Probit (MNP)
+ * Multivariate Probit,
+ * Multivariate Mixtures of Normals
+ * Hierarchical Linear Models with normal prior and covariates
+ * Hierarchical Multinomial Logits with mixture of normals prior and
+ covariates
+ * Bayesian analysis of choice-based conjoint data
+ * Bayesian treatment of linear instrumental variables models
+ * Analyis of Multivariate Ordinal survey data with scale usage heterogeneity
+ (as in Rossi et al, JASA (01)).
+ .
+ For further reference, consult the authors' book, _Bayesian Statistics and
+ Marketing_ by Allenby, McCulloch and Rossi.
diff --cc debian/rules
index 22f4c5d,0000000..a4e0f96
mode 100755,000000..100755
--- a/debian/rules
+++ b/debian/rules
@@@ -1,17 -1,0 +1,14 @@@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# debian/rules file for the Debian/GNU Linux r-cran-car package
+# Copyright 2003 by Dirk Eddelbuettel <edd at debian.org>
+
+DPKG_EXPORT_BUILDFLAGS = 1
+include /usr/share/dpkg/buildflags.mk
+
+include /usr/share/R/debian/r-cran.mk
+
+common-install-arch:: R_any_arch
+ rm -vf $(debRlib)/R.css $(debRlib)/$(cranName)/COPYING
+ mkdir -p debian/r-cran-bayesm/usr/share/doc/r-cran-bayesm/
+ (cd debian/r-cran-bayesm/usr/share/doc/r-cran-bayesm/; ln -s ../../../lib/R/site-library/bayesm/doc/Some_Useful_R_Pointers.pdf ../../../lib/R/site-library/bayesm/doc/Tips_On_Using_bayesm.pdf .)
-
- clean::
- chmod -x inst/doc/*.pdf
--
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