[Debichem-devel] Bug#1028722: Bug#1028722: prody: FTBFS: AssertionError: 3205 != 3211 : selection 'abs(x) == sqrt(sq(x))' for Selection 'all' failed, expected 3211, selected 3205

[Andrius Merkys]

Hello,

On 2023-09-30 15:11, Drew Parsons wrote:
> There seems to be ambiguity about the reproducibility of this bug.
> That's possibly consistent with problems with rounding, though the bug
> here seems to be more than an issue with floating point precision.
> 
> Upstream has made a new release.  I suggest packaging and uploading
> the new version. That will give more fresh information on the state of
> the build, whether the FTBFS is reliably reproducible.

prody is incompatible with the version of python3-biopython in Debian, 
even in the new upstream release. Upstream has been informed about that 
[1]. I am OK with letting prody fall out of testing, unless someone 
wants to help the upstream to update to newer python3-biopython.

[1] https://github.com/prody/ProDy/issues/1723

Best,
Andrius