[netcdf] branch upstream updated (90bd7fd -> c449008)
Bas Couwenberg
sebastic at debian.org
Thu Jan 25 18:51:27 UTC 2018
This is an automated email from the git hooks/post-receive script.
sebastic pushed a change to branch upstream
in repository netcdf.
from 90bd7fd New upstream version 4.5.0
new c449008 New upstream version 4.6.0
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 4 -
.travis.yml | 50 +-
CMakeLists.txt | 64 +-
Makefile.am | 94 +-
Makefile.in | 95 +-
RELEASE_NOTES.md | 10 +
cf | 45 +-
cf.cmake | 56 +-
config.h.cmake.in | 9 +
config.h.in | 21 +-
configure | 672 +-
configure.ac | 183 +-
dap4_test/Makefile.am | 14 +-
dap4_test/Makefile.in | 93 +-
dap4_test/test_data.c | 2 +
dap4_test/test_data.sh | 18 +-
dap4_test/test_meta.sh | 21 +-
dap4_test/test_parse.sh | 12 +-
dap4_test/test_raw.sh | 8 +-
dap4_test/tst_raw.sh | 2 -
docs/Doxyfile.developer | 2 +-
docs/Doxyfile.in | 17 +-
docs/FAQ.md | 6 +-
docs/Makefile.am | 14 +-
docs/Makefile.in | 19 +-
docs/all-error-codes.md | 6 +-
docs/auth.md | 36 +-
docs/cmake_faq.md | 69 -
docs/filters.md | 420 +
docs/guide.dox | 1 +
docs/images/Makefile.in | 5 +-
docs/install.md | 32 +-
docs/mainpage.dox | 4 +-
docs/old/netcdf-c.texi | 6 +-
docs/static-pages/software.html | 7354 ++--
docs/tutorial.dox | 11 +
docs/windows-binaries.md | 26 +-
examples/C/CMakeLists.txt | 10 +-
examples/C/Makefile.am | 49 +-
examples/C/Makefile.in | 367 +-
examples/C/filter_example.c | 309 +
examples/C/hdf5plugins/CMakeLists.txt | 37 +
examples/C/hdf5plugins/H5Zbzip2.c | 181 +
examples/C/hdf5plugins/Makefile.am | 28 +
{liblib => examples/C/hdf5plugins}/Makefile.in | 168 +-
examples/C/hdf5plugins/blocksort.c | 1094 +
examples/C/hdf5plugins/bzip2.nc | Bin 0 -> 11503 bytes
examples/C/hdf5plugins/bzlib.c | 1572 +
examples/C/hdf5plugins/bzlib.h | 282 +
examples/C/hdf5plugins/bzlib_private.h | 509 +
examples/C/hdf5plugins/compress.c | 672 +
examples/C/hdf5plugins/crctable.c | 104 +
examples/C/hdf5plugins/decompress.c | 646 +
examples/C/hdf5plugins/h5bzip2.h | 30 +
examples/C/hdf5plugins/huffman.c | 205 +
examples/C/hdf5plugins/randtable.c | 84 +
examples/C/run_examples.sh | 24 +
examples/C/run_examples4.sh | 39 +
examples/C/run_filter.sh | 29 +
examples/CDL/CMakeLists.txt | 11 +-
examples/CDL/Makefile.am | 16 +-
examples/CDL/Makefile.in | 64 +-
examples/CDL/create_sample_files.sh | 18 -
examples/CDL/do_comps.sh | 22 +
examples/CMakeLists.txt | 5 -
examples/Makefile.in | 5 +-
h5_test/CMakeLists.txt | 8 +-
h5_test/Makefile.am | 10 +-
h5_test/Makefile.in | 64 +-
h5_test/tst_h_atts3.c | 2 -
h5_test/tst_h_atts4.c | 2 -
h5_test/tst_h_dimscales.c | 10 +-
h5_test/tst_h_dimscales1.c | 45 +-
h5_test/tst_h_files.c | 3 +-
h5_test/tst_h_filters.c | 107 -
h5_test/tst_h_rd_cmp.c | 62 -
h5_test/tst_h_wrt_cmp.c | 125 +-
include/Makefile.am | 4 +-
include/Makefile.in | 17 +-
include/err_macros.h | 29 +-
include/nc.h | 5 +-
include/nc4dispatch.h | 6 +-
include/nc4internal.h | 18 +-
include/nc_tests.h | 25 +-
include/ncauth.h | 58 +
include/ncconfigure.h | 12 +
include/ncdispatch.h | 11 +-
include/ncfilter.h | 27 +
include/ncrc.h | 55 +-
include/netcdf.h | 681 +-
include/netcdf_par.h | 5 +-
include/rnd.h | 17 +-
lib_flags.am | 7 +-
libdap2/Makefile.in | 15 +-
libdap2/dapattr.c | 365 -
libdap2/dapcvt.c | 18 +-
libdap2/dapdump.c | 2 +-
libdap2/dapodom.c | 4 +-
libdap2/daputil.c | 19 +-
libdap2/ncd2dispatch.c | 107 +-
libdap2/ncd2dispatch.h | 9 +-
libdap2/test_vara.c | 4 +-
libdap4/CMakeLists.txt | 2 +-
libdap4/Makefile.am | 1 -
libdap4/Makefile.in | 41 +-
libdap4/d4chunk.c | 2 +-
libdap4/d4curlfunctions.c | 129 +-
libdap4/d4curlfunctions.h | 2 +-
libdap4/d4data.c | 1 -
libdap4/d4dump.c | 2 +-
libdap4/d4file.c | 79 +-
libdap4/d4http.c | 5 +-
libdap4/d4includes.h | 2 +
libdap4/d4meta.c | 22 +-
libdap4/d4odom.c | 4 +-
libdap4/d4parser.c | 19 +-
libdap4/d4rc.c | 666 -
libdap4/d4read.c | 59 +-
libdap4/d4swap.c | 2 +-
libdap4/d4util.c | 119 +-
libdap4/d4varx.c | 2 +-
libdap4/ncd4.h | 5 +-
libdap4/ncd4dispatch.c | 93 +-
libdap4/ncd4types.h | 65 +-
libdispatch/CMakeLists.txt | 4 +-
libdispatch/Makefile.am | 12 +-
libdispatch/Makefile.in | 64 +-
libdispatch/datt.c | 43 +-
libdispatch/dattget.c | 85 +-
libdispatch/dattinq.c | 225 +
libdispatch/dauth.c | 383 +
libdispatch/dcopy.c | 148 +-
libdispatch/ddim.c | 2 +-
libdispatch/ddispatch.c | 95 +-
libdispatch/derror.c | 27 +-
libdispatch/dfile.c | 1106 +-
libdispatch/dfilter.c | 237 +
libdispatch/dinternal.c | 6 +-
libdispatch/dparallel.c | 279 +-
libdispatch/drc.c | 611 +-
libdispatch/dstring.c | 58 +-
libdispatch/dtype.c | 17 +-
libdispatch/dutil.c | 254 +
libdispatch/dv2i.c | 613 +-
libdispatch/dvar.c | 491 +-
libdispatch/dvarget.c | 126 +-
libdispatch/dvarinq.c | 369 +-
libdispatch/dvarput.c | 29 +-
libdispatch/dwinpath.c | 2 -
libdispatch/nc.c | 3 +-
libdispatch/ncuri.c | 5 +-
libdispatch/test_pathcvt.c | 1 -
libdispatch/utf8proc.c | 3 +-
libdispatch/utf8proc.h | 24 +-
liblib/CMakeLists.txt | 8 +
liblib/Makefile.am | 8 +-
liblib/Makefile.in | 57 +-
libnetcdf.settings.in | 1 +
libsrc/Makefile.am | 9 +-
libsrc/Makefile.in | 44 +-
libsrc/attr.c | 2 -
libsrc/attr.m4 | 2 -
libsrc/dim.c | 5 -
libsrc/nc3dispatch.c | 19 +-
libsrc/nc3internal.c | 174 +-
libsrc/nc_hashmap.c | 23 +
libsrc/ncx.c | 37001 ++++++++++---------
libsrc/ncx.h | 21 +-
libsrc/ncx.m4 | 13 +-
libsrc/posixio.c | 3 -
libsrc/v1hpg.c | 28 +-
libsrc/var.c | 7 +-
libsrc4/Makefile.am | 12 +-
libsrc4/Makefile.in | 22 +-
libsrc4/nc3stub.c | 997 -
libsrc4/nc4attr.c | 736 +-
libsrc4/nc4dim.c | 176 +-
libsrc4/nc4dispatch.c | 13 +
libsrc4/nc4file.c | 3566 +-
libsrc4/nc4grp.c | 319 +-
libsrc4/nc4hdf.c | 6398 ++--
libsrc4/nc4info.c | 78 +-
libsrc4/nc4internal.c | 1216 +-
libsrc4/nc4type.c | 403 +-
libsrc4/nc4var.c | 1301 +-
libsrc4/ncfunc.c | 90 +-
libsrcp/Makefile.am | 5 -
libsrcp/Makefile.in | 23 +-
libsrcp/ncpdispatch.c | 13 +-
nc_test/CMakeLists.txt | 1 +
nc_test/Make0 | 11 +-
nc_test/Makefile.am | 63 +-
nc_test/Makefile.in | 236 +-
nc_test/large_files.c | 20 +-
nc_test/nc_enddef.c | 61 -
nc_test/nc_sync.c | 557 -
nc_test/nc_sync.h | 6 -
nc_test/nc_sync_child.c | 100 -
nc_test/nc_test.c | 10 +-
nc_test/quick_large_files.c | 1082 +-
nc_test/run_diskless.sh | 2 +-
nc_test/run_diskless2.sh | 3 +
nc_test/test_put.c | 3 +-
nc_test/test_put.m4 | 3 +-
nc_test/test_read.c | 6 +-
nc_test/test_read.m4 | 6 +-
nc_test/test_write.c | 2 +-
nc_test/test_write.m4 | 2 +-
nc_test/tst_atts3.c | 8 -
nc_test/tst_big_rvar.c | 7 +-
nc_test/tst_big_var2.c | 7 +-
nc_test/tst_big_var6.c | 6 +-
nc_test/tst_cdf5format.c | 354 +-
nc_test/tst_diskless.c | 3 +-
nc_test/tst_elatefill.c | 3 +-
nc_test/tst_formats.c | 159 +
nc_test/tst_global_fillval.c | 77 +-
nc_test/tst_inq_type.c | 266 +-
nc_test/tst_max_var_dims.c | 34 +
nc_test/tst_misc.c | 22 +
nc_test/tst_parallel2.c | 44 +-
nc_test/tst_utf8_phrases.c | 8 +-
nc_test/tst_utf8_validate.c | Bin 15275 -> 15268 bytes
nc_test/util.c | 13 +-
nc_test4/CMakeLists.txt | 51 +-
nc_test4/Make0 | 33 +-
nc_test4/Makefile.am | 149 +-
nc_test4/Makefile.in | 816 +-
nc_test4/bzip2.cdl | 83 +
nc_test4/filter_test/CMakeLists.txt | 34 +
nc_test4/filter_test/H5Zbzip2.c | 171 +
nc_test4/filter_test/H5Ztemplate.c | 104 +
nc_test4/filter_test/H5Ztest.c | 207 +
nc_test4/filter_test/Make0 | 38 +
nc_test4/filter_test/Makefile.am | 77 +
nc_test4/filter_test/blocksort.c | 1094 +
nc_test4/filter_test/bzlib.c | 1572 +
nc_test4/filter_test/bzlib.h | 282 +
nc_test4/filter_test/bzlib_private.h | 509 +
nc_test4/filter_test/compress.c | 672 +
nc_test4/filter_test/crctable.c | 104 +
nc_test4/filter_test/decompress.c | 646 +
nc_test4/filter_test/fake.c | 5 +
nc_test4/filter_test/h5bzip2.h | 12 +
nc_test4/filter_test/h5test.h | 18 +
nc_test4/filter_test/huffman.c | 205 +
nc_test4/filter_test/randtable.c | 84 +
nc_test4/filter_test/test_filter.c | 493 +
nc_test4/filter_test/test_misc.c | 414 +
nc_test4/filter_test/tst_filter.sh | 128 +
nc_test4/filtered.cdl | 88 +
nc_test4/findplugin.in | 99 +
nc_test4/h5testszip.c | 182 +
nc_test4/hdf5plugins/CMakeLists.txt | 37 +
nc_test4/hdf5plugins/H5Zbzip2.c | 181 +
nc_test4/hdf5plugins/H5Zmisc.c | 252 +
nc_test4/hdf5plugins/H5Ztemplate.c | 104 +
nc_test4/hdf5plugins/Makefile.am | 26 +
{liblib => nc_test4/hdf5plugins}/Makefile.in | 170 +-
nc_test4/hdf5plugins/blocksort.c | 1094 +
nc_test4/hdf5plugins/bzip2.nc | Bin 0 -> 11503 bytes
nc_test4/hdf5plugins/bzlib.c | 1572 +
nc_test4/hdf5plugins/bzlib.h | 282 +
nc_test4/hdf5plugins/bzlib_private.h | 509 +
nc_test4/hdf5plugins/compress.c | 672 +
nc_test4/hdf5plugins/crctable.c | 104 +
nc_test4/hdf5plugins/decompress.c | 646 +
nc_test4/hdf5plugins/h5bzip2.h | 30 +
nc_test4/hdf5plugins/h5misc.h | 34 +
nc_test4/hdf5plugins/huffman.c | 205 +
nc_test4/hdf5plugins/randtable.c | 84 +
nc_test4/ref_bzip2.c | 98 +
nc_test4/ref_szip.cdl | 85 +
nc_test4/ref_szip.h5 | Bin 0 -> 5588 bytes
nc_test4/renamegroup.c | 2 +-
nc_test4/run_get_hdf4_files.sh | 16 +-
nc_test4/run_par_test.sh | 1 +
nc_test4/test_filter.c | 306 +
nc_test4/test_filter_misc.c | 452 +
nc_test4/test_szip.c | 155 +
nc_test4/test_wrapper.in | 35 +
nc_test4/tst_atts1.c | 4 +-
{ncdump => nc_test4}/tst_bug324.c | 2 +-
nc_test4/tst_camrun.c | 12 -
nc_test4/tst_chunk_hdf4.c | 34 +-
nc_test4/tst_chunks.c | 41 +
nc_test4/tst_compounds.c | 8 +-
nc_test4/tst_converts.c | 67 +-
nc_test4/tst_create_files.c | 2 -
nc_test4/tst_dims3.c | 8 +-
nc_test4/tst_empty_vlen_unlim.c | 30 +-
nc_test4/tst_enums.c | 5 +
nc_test4/tst_files.c | 79 +-
nc_test4/tst_files4.c | 2 -
nc_test4/tst_files5.c | 2 +-
nc_test4/tst_fill_attr_vanish.c | 9 -
nc_test4/tst_fills2.c | 2 +-
nc_test4/tst_filter.sh | 146 +
nc_test4/tst_filterparser.c | 194 +
nc_test4/tst_formatx_hdf4.sh | 15 +-
nc_test4/tst_grps.c | 145 +-
nc_test4/tst_grps2.c | 4 +-
nc_test4/tst_h5_endians.c | 91 +-
nc_test4/tst_h_atts2.c | 127 -
nc_test4/tst_h_files3.c | 223 -
nc_test4/tst_h_scalar.c | 2 -
nc_test4/tst_h_strbug.c | 8 +-
nc_test4/tst_h_vl2.c | 4 +-
nc_test4/tst_hdf5_file_compat.c | 1 -
nc_test4/tst_interops.c | 4 -
nc_test4/tst_interops2.c | 11 +
nc_test4/tst_interops3.c | 55 +-
nc_test4/tst_interops5.c | 16 +-
nc_test4/tst_large.c | 28 +-
nc_test4/tst_large2.c | 6 +-
nc_test4/tst_large3.c | 6 +-
nc_test4/tst_large5.c | 2 -
nc_test4/tst_rehash.c | 14 +-
nc_test4/tst_rename.c | 539 +-
nc_test4/tst_simplerw_coll_r.c | 641 +-
nc_test4/tst_szip.sh | 29 +
nc_test4/tst_types.c | 666 +-
nc_test4/tst_vars.c | 37 +-
nc_test4/tst_vars2.c | 578 +-
nc_test4/tst_vars3.c | 27 +-
nc_test4/tst_xplatform2.c | 168 +-
nc_test4/unfiltered.cdl | 87 +
ncdap_test/Makefile.am | 16 +-
ncdap_test/Makefile.in | 121 +-
ncdap_test/expected3/Makefile.in | 5 +-
ncdap_test/expectremote3/Makefile.in | 5 +-
ncdap_test/t_dap.c | 15 +-
ncdap_test/t_dap3a.c | 16 +-
ncdap_test/t_dap3c.c | 6 +-
ncdap_test/t_dap4.c | 466 -
ncdap_test/t_dap4a.c | 937 -
ncdap_test/t_dap4c.c | 51 -
ncdap_test/test_cvt.c | 16 +-
ncdap_test/test_nstride_cached.c | 1 -
ncdap_test/test_partvar.c | 6 +-
ncdap_test/test_partvar2.c | 6 +-
ncdap_test/test_vara.c | 7 +-
ncdap_test/test_varm3.c | 4 +-
ncdap_test/testdata3/Makefile.in | 5 +-
ncdap_test/testurl.sh | 14 +-
ncdap_test/tst_ber.sh | 9 +-
ncdap_test/tst_formatx.sh | 8 +-
ncdap_test/tst_ncdap.sh | 4 +-
ncdap_test/tst_remote.sh | 3 +-
ncdap_test/tst_special.sh | 3 +-
ncdap_test/tst_tds.sh | 3 +-
ncdump/CMakeLists.txt | 108 +-
ncdump/L512.bin | 1 +
ncdump/Makefile.am | 236 +-
ncdump/Makefile.in | 741 +-
ncdump/bom.c | 4 +-
ncdump/cdl.h | 1 +
ncdump/cdl/Makefile.in | 5 +-
ncdump/ctest.c | 1472 -
ncdump/ctest64.c | 1472 -
ncdump/ctests.sh | 9 +-
ncdump/dumplib.c | 56 -
ncdump/dumplib.h | 5 -
ncdump/expected/Makefile.in | 5 +-
ncdump/indent.h | 6 +-
ncdump/isnan.h | 6 +-
ncdump/nccopy.1 | 25 +
ncdump/nccopy.c | 260 +-
ncdump/ncdump.c | 28 +-
ncdump/nctime0.h | 7 +-
ncdump/nctrunc.c | 1 -
ncdump/ocprint.c | 3 -
ncdump/ref_ctest.c | 2603 +-
ncdump/ref_ctest64.c | 2603 +-
ncdump/ref_null_byte_padding_test.nc | Bin 0 -> 1036 bytes
...st_360_day_1900.nc => ref_test_360_day_1900.nc} | Bin
...st_365_day_1900.nc => ref_test_365_day_1900.nc} | Bin
...st_366_day_1900.nc => ref_test_366_day_1900.nc} | Bin
ncdump/ref_test_corrupt_magic.nc | Bin 0 -> 6368 bytes
ncdump/ref_tst_nc4_utf8_4.cdl | 24 +
ncdump/run_ncgen_nc4_tests.sh | 15 +-
ncdump/run_ncgen_tests.sh | 13 +-
ncdump/run_utf8_nc4_tests.sh | 22 +-
ncdump/run_utf8_tests.sh | 48 +-
ncdump/test_corrupt_magic.cdl | 11 +
ncdump/tst_calendars.sh | 2 +-
ncdump/tst_compress.c | 2 +-
ncdump/tst_dimsizes.sh | 14 +-
ncdump/tst_fileinfo.sh | 6 +-
ncdump/tst_fillbug.c | 8 +-
ncdump/tst_fillbug.sh | 1 +
ncdump/tst_formatx3.sh | 26 +-
ncdump/tst_formatx4.sh | 18 +-
ncdump/tst_h_rdc0.c | 11 +-
ncdump/tst_h_scalar.c | 4 +-
ncdump/tst_h_scalar.sh | 1 +
ncdump/tst_hdf5_offset.sh | 45 +
ncdump/tst_inmemory_nc3.sh | 16 +-
ncdump/tst_inmemory_nc4.sh | 16 +-
ncdump/tst_nccopy3.sh | 33 +-
ncdump/tst_nccopy4.sh | 6 +-
ncdump/tst_ncgen4.sh | 17 +-
ncdump/tst_ncgen4_classic.sh | 11 +-
ncdump/tst_ncgen4_cycle.sh | 17 +-
ncdump/tst_ncgen4_diff.sh | 6 +-
ncdump/tst_ncgen_shared.sh | 5 +-
ncdump/tst_netcdf4.sh | 151 +-
ncdump/tst_netcdf4_4.sh | 10 +-
ncdump/tst_null_byte_padding.sh | 17 +
ncdump/tst_output.sh | 58 +-
ncdump/tst_string_data.c | 2 +-
ncdump/utils.h | 5 +
ncdump/vardata.c | 2 -
ncdump/vardata.h | 6 +-
ncgen/Makefile.am | 2 +
ncgen/Makefile.in | 14 +-
ncgen/cvt.c | 20 +-
ncgen/genbin.c | 27 +
ncgen/genc.c | 56 +
ncgen/genlib.h | 2 +-
ncgen/includes.h | 1 -
ncgen/main.c | 12 +-
ncgen/makeparser.sh | 8 +
ncgen/nc_iter.h | 6 +-
ncgen/ncgen.h | 19 +-
ncgen/ncgen.l | 10 +-
ncgen/ncgen.y | 50 +-
ncgen/ncgenl.c | 2098 +-
ncgen/ncgeny.c | 1351 +-
ncgen/ncgeny.h | 86 +-
ncgen3/Makefile.in | 16 +-
ncgen3/genlib.c | 55 -
ncgen3/genlib.h | 5 -
ncgen3/load.c | 4 -
ncgen3/main.c | 1 -
nctest/CMakeLists.txt | 2 +
nctest/Makefile.am | 11 +-
nctest/Makefile.in | 61 +-
nctest/driver.c | 227 +-
oc2/CMakeLists.txt | 5 +-
oc2/Makefile.am | 6 +-
oc2/Makefile.in | 38 +-
oc2/daplex.c | 22 +-
oc2/oc.c | 130 +-
oc2/occlientparams.c | 29 -
oc2/occlientparams.h | 11 -
oc2/occurlfunctions.c | 274 +-
oc2/occurlfunctions.h | 2 +-
oc2/ocdump.c | 50 +-
oc2/ochttp.c | 24 +-
oc2/ochttp.h | 2 +-
oc2/ocinternal.c | 188 +-
oc2/ocinternal.h | 62 +-
oc2/ocnode.c | 23 +-
oc2/ocrc.c | 809 -
oc2/ocread.c | 63 +-
oc2/ocutil.c | 52 +-
oc2/xxdr.c | 2 +-
test-driver-verbose | 35 +-
test_common.in | 22 +-
460 files changed, 68705 insertions(+), 49685 deletions(-)
delete mode 100644 docs/cmake_faq.md
create mode 100644 docs/filters.md
create mode 100644 examples/C/filter_example.c
create mode 100644 examples/C/hdf5plugins/CMakeLists.txt
create mode 100644 examples/C/hdf5plugins/H5Zbzip2.c
create mode 100644 examples/C/hdf5plugins/Makefile.am
copy {liblib => examples/C/hdf5plugins}/Makefile.in (80%)
create mode 100644 examples/C/hdf5plugins/blocksort.c
create mode 100644 examples/C/hdf5plugins/bzip2.nc
create mode 100644 examples/C/hdf5plugins/bzlib.c
create mode 100644 examples/C/hdf5plugins/bzlib.h
create mode 100644 examples/C/hdf5plugins/bzlib_private.h
create mode 100644 examples/C/hdf5plugins/compress.c
create mode 100644 examples/C/hdf5plugins/crctable.c
create mode 100644 examples/C/hdf5plugins/decompress.c
create mode 100644 examples/C/hdf5plugins/h5bzip2.h
create mode 100644 examples/C/hdf5plugins/huffman.c
create mode 100644 examples/C/hdf5plugins/randtable.c
create mode 100755 examples/C/run_examples.sh
create mode 100755 examples/C/run_examples4.sh
create mode 100755 examples/C/run_filter.sh
delete mode 100755 examples/CDL/create_sample_files.sh
delete mode 100644 h5_test/tst_h_filters.c
delete mode 100644 h5_test/tst_h_rd_cmp.c
create mode 100644 include/ncauth.h
create mode 100644 include/ncfilter.h
delete mode 100644 libdap4/d4rc.c
create mode 100644 libdispatch/dauth.c
create mode 100644 libdispatch/dfilter.c
create mode 100644 libdispatch/dutil.c
delete mode 100644 libsrc4/nc3stub.c
delete mode 100644 nc_test/nc_enddef.c
delete mode 100644 nc_test/nc_sync.c
delete mode 100644 nc_test/nc_sync.h
delete mode 100644 nc_test/nc_sync_child.c
create mode 100644 nc_test/tst_formats.c
create mode 100644 nc_test/tst_max_var_dims.c
create mode 100644 nc_test4/bzip2.cdl
create mode 100644 nc_test4/filter_test/CMakeLists.txt
create mode 100644 nc_test4/filter_test/H5Zbzip2.c
create mode 100644 nc_test4/filter_test/H5Ztemplate.c
create mode 100644 nc_test4/filter_test/H5Ztest.c
create mode 100644 nc_test4/filter_test/Make0
create mode 100644 nc_test4/filter_test/Makefile.am
create mode 100644 nc_test4/filter_test/blocksort.c
create mode 100644 nc_test4/filter_test/bzlib.c
create mode 100644 nc_test4/filter_test/bzlib.h
create mode 100644 nc_test4/filter_test/bzlib_private.h
create mode 100644 nc_test4/filter_test/compress.c
create mode 100644 nc_test4/filter_test/crctable.c
create mode 100644 nc_test4/filter_test/decompress.c
create mode 100644 nc_test4/filter_test/fake.c
create mode 100644 nc_test4/filter_test/h5bzip2.h
create mode 100644 nc_test4/filter_test/h5test.h
create mode 100644 nc_test4/filter_test/huffman.c
create mode 100644 nc_test4/filter_test/randtable.c
create mode 100644 nc_test4/filter_test/test_filter.c
create mode 100644 nc_test4/filter_test/test_misc.c
create mode 100644 nc_test4/filter_test/tst_filter.sh
create mode 100644 nc_test4/filtered.cdl
create mode 100644 nc_test4/findplugin.in
create mode 100755 nc_test4/h5testszip.c
create mode 100644 nc_test4/hdf5plugins/CMakeLists.txt
create mode 100644 nc_test4/hdf5plugins/H5Zbzip2.c
create mode 100644 nc_test4/hdf5plugins/H5Zmisc.c
create mode 100644 nc_test4/hdf5plugins/H5Ztemplate.c
create mode 100644 nc_test4/hdf5plugins/Makefile.am
copy {liblib => nc_test4/hdf5plugins}/Makefile.in (80%)
create mode 100644 nc_test4/hdf5plugins/blocksort.c
create mode 100644 nc_test4/hdf5plugins/bzip2.nc
create mode 100644 nc_test4/hdf5plugins/bzlib.c
create mode 100644 nc_test4/hdf5plugins/bzlib.h
create mode 100644 nc_test4/hdf5plugins/bzlib_private.h
create mode 100644 nc_test4/hdf5plugins/compress.c
create mode 100644 nc_test4/hdf5plugins/crctable.c
create mode 100644 nc_test4/hdf5plugins/decompress.c
create mode 100644 nc_test4/hdf5plugins/h5bzip2.h
create mode 100644 nc_test4/hdf5plugins/h5misc.h
create mode 100644 nc_test4/hdf5plugins/huffman.c
create mode 100644 nc_test4/hdf5plugins/randtable.c
create mode 100644 nc_test4/ref_bzip2.c
create mode 100644 nc_test4/ref_szip.cdl
create mode 100644 nc_test4/ref_szip.h5
create mode 100644 nc_test4/test_filter.c
create mode 100644 nc_test4/test_filter_misc.c
create mode 100644 nc_test4/test_szip.c
create mode 100644 nc_test4/test_wrapper.in
rename {ncdump => nc_test4}/tst_bug324.c (98%)
create mode 100755 nc_test4/tst_filter.sh
create mode 100644 nc_test4/tst_filterparser.c
delete mode 100644 nc_test4/tst_h_atts2.c
delete mode 100644 nc_test4/tst_h_files3.c
create mode 100755 nc_test4/tst_szip.sh
create mode 100644 nc_test4/unfiltered.cdl
delete mode 100644 ncdap_test/t_dap4.c
delete mode 100644 ncdap_test/t_dap4a.c
delete mode 100644 ncdap_test/t_dap4c.c
create mode 100644 ncdump/L512.bin
delete mode 100644 ncdump/ctest.c
delete mode 100644 ncdump/ctest64.c
create mode 100644 ncdump/ref_null_byte_padding_test.nc
rename ncdump/{test_360_day_1900.nc => ref_test_360_day_1900.nc} (100%)
rename ncdump/{test_365_day_1900.nc => ref_test_365_day_1900.nc} (100%)
rename ncdump/{test_366_day_1900.nc => ref_test_366_day_1900.nc} (100%)
create mode 100644 ncdump/ref_test_corrupt_magic.nc
create mode 100644 ncdump/ref_tst_nc4_utf8_4.cdl
create mode 100644 ncdump/test_corrupt_magic.cdl
create mode 100755 ncdump/tst_hdf5_offset.sh
create mode 100755 ncdump/tst_null_byte_padding.sh
create mode 100644 ncgen/makeparser.sh
delete mode 100644 oc2/occlientparams.c
delete mode 100644 oc2/occlientparams.h
delete mode 100644 oc2/ocrc.c
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