[med-svn] [SCM] tabix branch, meta, updated. meta/0.2.3-1-7-g1794f4f
Charles Plessy
plessy at debian.org
Fri Jun 22 04:43:45 UTC 2012
The following commit has been merged in the meta branch:
commit 24af80f4c9d0e434a99911928c3db7ca766b6932
Author: Charles Plessy <plessy at debian.org>
Date: Fri Jun 22 13:34:20 2012 +0900
tabix 0.2.5-1
diff --git a/armel.log b/armel.log
index 7028c90..25813ad 100644
--- a/armel.log
+++ b/armel.log
@@ -1,49 +1,50 @@
-From buildd at ancina.debian.org Tue Apr 12 10:25:48 2011
+From buildd at ancina.debian.org Tue May 10 11:18:09 2011
Return-path: <buildd at ancina.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
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CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at ancina.debian.org>)
- id 1Q9an6-0002Zc-0J
- for logs at buildd.debian.org; Tue, 12 Apr 2011 10:25:48 +0000
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Received: from buildd by ancina.debian.org with local (Exim 4.69)
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- id 1Q9amo-0007xQ-LG; Tue, 12 Apr 2011 10:25:30 +0000
+ id 1QJkx0-0007hH-Ae; Tue, 10 May 2011 11:18:02 +0000
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 12 Apr 2011 10:25:30 +0000
+Date: Tue, 10 May 2011 11:18:02 +0000
From: Build Daemon <buildd at ancina.debian.org>
To: buildd-porters at ancina.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on armel (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-1 on armel (dist=sid)
Key-Id: A1EAA0BB
-Message-Id: <E1Q9amo-0007xQ-LG at ancina.debian.org>
+Message-Id: <E1QJkx0-0007hH-Ae at ancina.debian.org>
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ancina.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (armel) 12 Apr 2011 10:23 ║
+║ tabix 0.2.5-1 (armel) 10 May 2011 11:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: armel
Hit http://ftp.de.debian.org sid InRelease
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
+Get:2 http://incoming.debian.org Release [1604 B]
Hit http://ftp.de.debian.org sid/contrib Sources/DiffIndex
Hit http://ftp.de.debian.org sid/main armel Packages/DiffIndex
Hit http://ftp.de.debian.org sid/contrib armel Packages/DiffIndex
@@ -56,12 +57,11 @@ Hit http://incoming.debian.org sid/contrib armel Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
Ign http://ftp.de.debian.org sid/contrib Translation-en
-Get:2 http://incoming.debian.org Release [1604 B]
-Get:3 http://incoming.debian.org Sources [49.1 kB]
-Get:4 http://incoming.debian.org Packages [777 kB]
-Ign http://incoming.debian.org sid/contrib Translation-en
+Get:3 http://incoming.debian.org Sources [27.9 kB]
+Get:4 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 828 kB in 12s (64.9 kB/s)
+Ign http://incoming.debian.org sid/contrib Translation-en
+Fetched 575 kB in 11s (51.2 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -82,11 +82,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (95.0 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (95.2 kB/s)
Download complete and in download only mode
Check arch
@@ -106,12 +106,18 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+The following packages were automatically installed and are no longer required:
+ groff-base libpipeline1 libssl0.9.8 man-db
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+The following packages were automatically installed and are no longer required:
+ groff-base libpipeline1 libssl0.9.8 man-db
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -120,124 +126,119 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.1)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0)
+dpkg: already installed (1.16.0.2)
e2fsprogs: already installed (1.41.12-2)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
+ncurses-base: already installed (5.9-1)
ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.10.1-19)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-13)
-gcc: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.16.0 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
+The following package was automatically installed and is no longer required:
+ libssl0.9.8
+Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- file gettext gettext-base groff-base html2text intltool-debian libcroco3
- libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ file gettext gettext-base html2text intltool-debian libcroco3 libglib2.0-0
+ libmagic1 libunistring0 libxml2 po-debconf
Suggested packages:
- devscripts doc-base dh-make gettext-doc groff less www-browser
- libmail-box-perl
+ devscripts dh-make gettext-doc libmail-box-perl
Recommended packages:
autotools-dev autopoint libglib2.0-data shared-mime-info xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpipeline1 libunistring0
- libxml2 man-db po-debconf zlib1g-dev
+ cdbs debhelper file gettext gettext-base html2text intltool-debian libcroco3
+ libglib2.0-0 libmagic1 libunistring0 libxml2 po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 17 newly installed, 0 to remove and 11 not upgraded.
-Need to get 0 B/9721 kB of archives.
-After this operation, 27.0 MB of additional disk space will be used.
-Selecting previously deselected package groff-base.
-(Reading database ... 10830 files and directories currently installed.)
-Unpacking groff-base (from .../groff-base_1.21-5_armel.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_armel.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_armel.deb) ...
+0 upgraded, 14 newly installed, 0 to remove and 9 not upgraded.
+Need to get 0 B/6445 kB of archives.
+After this operation, 19.8 MB of additional disk space will be used.
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_armel.deb) ...
+(Reading database ... 11631 files and directories currently installed.)
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_armel.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_armel.deb) ...
+Unpacking file (from .../file_5.04-5+b1_armel.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_armel.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_armel.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_armel.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_armel.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_armel.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_armel.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_armel.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_armel.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_armel.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_armel.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_armel.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_armel.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_armel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_armel.deb) ...
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
-Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Processing triggers for man-db ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+The following package was automatically installed and is no longer required:
+ libssl0.9.8
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.31-rc9 armel (armv5tel)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0 g++-4.5_4.5.2-8 gcc-4.5_4.5.2-8 libc6-dev_2.11.2-13 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 linux-libc-dev_2.6.38-1
-Package versions: apt_0.8.13 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.5.2-5 cpp-4.5_4.5.2-8 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dmsetup_2:1.02.63-3 dpkg_1.16.0 dpkg-dev_1.16.0 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.5.2-5 g++-4.5_4.5.2-8 gawk_1:3.1.7.dfsg-5 gcc_4:4.5.2-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.5-15 gcc-4.5_4.5.2-8 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc6_2.11.2-13 libc6-dev_2.11.2-13 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdevmapper1.02.1_2:1.02.63-3 libdpkg-perl_1.16.0 libelfg0_0.8.13-1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-2 libgpg-error0_1.10-0.3 libgpm2_1.20.4-3.3 libldap-2.4-2_2.4.25-1 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpc2_0.9-2 libmpfr4_3.0.0-9 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.3-3 libss2_1.41.12-2 libssl0.9.8_0.9.8o-6 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 libtasn1-3_2.9-2 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libudev0_167-2 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libvolume-id1_0.141-2 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.9-1 netbase_4.45 nullmailer_1:1.04-1.2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011e-1 util-linux_2.17.2-9.1 wget_1.12-3 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.2 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 libc6-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 linux-libc-dev_2.6.38-3
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dmsetup_2:1.02.63-3 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gawk_1:3.1.7.dfsg-5 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdevmapper1.02.1_2:1.02.63-3 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libgpm2_1.20.4-3.4 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-2 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libsasl2-2_2.1.23.dfsg1-8 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libssl0.9.8_0.9.8o-7 libssl1.0.0_1.0.0d-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libudev0_168-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libvolume-id1_0.141-2 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 netbase_4.45 nullmailer_1:1.05-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 wget_1.12-3.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -249,12 +250,12 @@ Unpack source
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -270,8 +271,8 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture armel
fakeroot debian/rules clean
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -281,12 +282,12 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
dh_clean
debian/rules build
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -296,21 +297,23 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-armel-zvxOSy/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -341,6 +344,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -359,22 +363,22 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_armel.deb'.
- dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../tabix_0.2.4-1_armel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_armel.deb'.
+ dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../tabix_0.2.5-1_armel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-1025
+Build finished at 20110510-1117
-tabix_0.2.4-1_armel.changes:
+tabix_0.2.5-1_armel.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: armel
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
Maintainer: armel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org>
@@ -382,35 +386,34 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- b0d82a179d0101df362458433edacf984caca56e 52682 tabix_0.2.4-1_armel.deb
+ c6e87af1cf3100af5cda3db32967076054cace29 54600 tabix_0.2.5-1_armel.deb
Checksums-Sha256:
- 7a762de0831f139602fbed5e94f515979491469f8d23331cabd23a146749ce11 52682 tabix_0.2.4-1_armel.deb
+ d80c969249c04e2a8b5e1e7555a77f2ea5a749f7f35b5546b5983195bed86d75 54600 tabix_0.2.5-1_armel.deb
Files:
- 41c444cc1c83252edec1d06608bf8f64 52682 science optional tabix_0.2.4-1_armel.deb
+ 0e46b33d1ef6380e244791ddaa9806cf 54600 science optional tabix_0.2.5-1_armel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_armel.deb
+tabix_0.2.5-1_armel.deb
───────────────────────
new debian package, version 2.0.
- size 52682 bytes: control archive= 958 bytes.
+ size 54600 bytes: control archive= 992 bytes.
785 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 156
+ Installed-Size: 160
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -423,25 +426,26 @@ tabix_0.2.4-1_armel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/bin/
--rwxr-xr-x root/root 23740 2011-04-12 10:24 ./usr/bin/bgzip
--rwxr-xr-x root/root 57440 2011-04-12 10:24 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 10:24 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 23588 2011-05-10 11:17 ./usr/bin/bgzip
+-rwxr-xr-x root/root 60240 2011-05-10 11:17 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 10:24 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-lrwxrwxrwx root/root 0 2011-04-12 10:24 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -455,21 +459,27 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armel-sbuild-7e450777-8b6b-4da6-b1c5-59f96f059e65/build/buildd-tabix_0.2.4-1-armel-zvxOSy
+Purging /var/lib/schroot/mount/sid-armel-sbuild-1f46d419-2c6c-4021-99fa-d28afdff2ffd/build/buildd-tabix_0.2.5-1-armel-x2P61d
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+The following package was automatically installed and is no longer required:
+ libssl0.9.8
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
+The following packages were automatically installed and are no longer required:
+ groff-base libpipeline1 libssl0.9.8 man-db
+Use 'apt-get autoremove' to remove them.
The following packages will be REMOVED:
- cdbs* debhelper* file* gettext* gettext-base* groff-base* html2text*
- intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpipeline1*
- libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 17 to remove and 11 not upgraded.
-After this operation, 27.0 MB disk space will be freed.
-(Reading database ... 12098 files and directories currently installed.)
+ cdbs* debhelper* file* gettext* gettext-base* html2text* intltool-debian*
+ libcroco3* libglib2.0-0* libmagic1* libunistring0* libxml2* po-debconf*
+ zlib1g-dev*
+0 upgraded, 0 newly installed, 14 to remove and 9 not upgraded.
+After this operation, 19.8 MB disk space will be freed.
+(Reading database ... 12506 files and directories currently installed.)
Removing cdbs ...
Removing debhelper ...
Removing file ...
@@ -477,10 +487,6 @@ Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing groff-base ...
-Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
Removing libcroco3 ...
@@ -489,31 +495,30 @@ Removing libglib2.0-0 ...
Purging configuration files for libglib2.0-0 ...
Removing libmagic1 ...
Purging configuration files for libmagic1 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
Removing libunistring0 ...
Purging configuration files for libunistring0 ...
Removing libxml2 ...
Purging configuration files for libxml2 ...
Removing zlib1g-dev ...
+Processing triggers for man-db ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armel
-Build-Space: 1316
-Build-Time: 73
+Build-Space: 1356
+Build-Time: 74
Distribution: sid
-Install-Time: 28
-Job: tabix_0.2.4-1
+Install-Time: 26
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 134
-Source-Version: 0.2.4-1
-Space: 1316
+Package-Time: 133
+Source-Version: 0.2.5-1
+Space: 1356
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-1025
-Build needed 00:02:14, 1316k disc space
+Finished at 20110510-1117
+Build needed 00:02:13, 1356k disc space
Signature with key 'A1EAA0BB' requested:
diff --git a/hurd-i386.log b/hurd-i386.log
index 7fa95cb..27a0e91 100644
--- a/hurd-i386.log
+++ b/hurd-i386.log
@@ -1,65 +1,73 @@
-From buildd at rossini.debian.net Tue Apr 12 11:01:29 2011
-Return-path: <buildd at rossini.debian.net>
-Received: from io.ethz.ch ([129.132.80.17] helo=io.debian.net)
+From buildd at bach.debian.net Tue May 10 11:27:03 2011
+Return-path: <buildd at bach.debian.net>
+Received: from callisto.debian.net ([80.87.129.151])
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at rossini.debian.net>)
- id 1Q9bLc-0000TI-Jg
- for logs at buildd.debian.org; Tue, 12 Apr 2011 11:01:29 +0000
-Received: from hurd.ethz.ch ([192.33.98.55] helo=rossini.debian.net)
- by io.debian.net with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at rossini.debian.net>)
- id 1Q9bLV-0005bA-5F; Tue, 12 Apr 2011 13:01:21 +0200
-Received: from buildd by rossini.debian.net with local (Exim 4.72)
- (envelope-from <buildd at rossini.debian.net>)
- id 1Q9bLU-0004qc-0y; Tue, 12 Apr 2011 11:01:20 +0000
-Date: Tue, 12 Apr 2011 11:01:20 +0000
-Message-Id: <E1Q9bLU-0004qc-0y at rossini.debian.net>
-From: Build Daemon <buildd at rossini.debian.net>
-To: samuel.thibault at labri.fr, mbanck at debian.org, logs at debian-ports.org,
+ (Exim 4.72) (envelope-from <buildd at bach.debian.net>)
+ id 1QJl5i-0008Su-Iz
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:27:03 +0000
+Received: from bach.debian.net ([10.3.0.1])
+ by callisto.debian.net with esmtp (Exim 4.69)
+ (envelope-from <buildd at bach.debian.net>)
+ id 1QJl5g-0007Uc-G6; Tue, 10 May 2011 12:27:00 +0100
+Received: from buildd by bach.debian.net with local (Exim 4.72)
+ (envelope-from <buildd at bach.debian.net>)
+ id 1QJl5k-0001bI-AD; Tue, 10 May 2011 11:27:04 +0000
+Date: Tue, 10 May 2011 11:27:04 +0000
+Message-Id: <E1QJl5k-0001bI-AD at bach.debian.net>
+From: Build Daemon <buildd at bach.debian.net>
+To: samuel.thibault at labri.fr, mbanck at gmx.net, logs at buildd.debian-ports.org,
logs at buildd.debian.org, debian-hurd-build-logs at lists.alioth.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on hurd-i386 (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-1 on hurd-i386 (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.60.0 (23 Feb 2010) on rossini.debian.net
+sbuild (Debian sbuild) 0.59.1 (31 Jan 2010) on bach.debian.net
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (hurd-i386) 12 Apr 2011 10:53 ║
+║ tabix 0.2.5-1 (hurd-i386) 10 mai 2011 11:22 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
+Version: 0.2.5-1
Architecture: hurd-i386
-Chroot Build Dir: /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR
-Start Time: 20110412-1053
+Chroot Build Dir: /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7
+Start Time: 20110510-1122
Ign file: ./ InRelease
Ign file: ./ Release.gpg
Ign file: ./ Release
Ign file: ./ Translation-en
+Ign file: ./ Translation-fr
+Hit http://ftp.uk.debian.org sid InRelease
+Ign http://incoming.debian.org InRelease
+Get:1 http://incoming.debian.org Release.gpg [836 B]
Ign http://ftp.debian-ports.org unreleased InRelease
-Hit http://ftp.uk.debian.org unstable InRelease
-Hit http://ftp.uk.debian.org experimental InRelease
+Get:2 http://incoming.debian.org Release [1604 B]
Hit http://ftp.debian-ports.org unreleased Release.gpg
+Hit http://ftp.uk.debian.org sid/main Sources/DiffIndex
Hit http://ftp.debian-ports.org unreleased Release
-Ign http://incoming.debian.org InRelease
-Hit http://ftp.uk.debian.org unstable/main Sources/DiffIndex
-Get:1 http://incoming.debian.org Release.gpg [836 B]
+Get:3 http://incoming.debian.org Sources [27.5 kB]
+Hit http://ftp.uk.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.uk.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.uk.debian.org sid/main hurd-i386 Packages/DiffIndex
+Hit http://ftp.uk.debian.org sid/contrib hurd-i386 Packages/DiffIndex
+Hit http://ftp.uk.debian.org sid/non-free hurd-i386 Packages/DiffIndex
+Ign http://ftp.uk.debian.org sid/contrib TranslationIndex
+Hit http://ftp.uk.debian.org sid/main TranslationIndex
+Ign http://ftp.uk.debian.org sid/non-free TranslationIndex
+Hit http://ftp.uk.debian.org sid/main Translation-fr
+Get:4 http://incoming.debian.org Packages [510 kB]
+Ign http://ftp.uk.debian.org sid/contrib Translation-en
+Ign http://ftp.uk.debian.org sid/contrib Translation-fr
+Ign http://ftp.uk.debian.org sid/non-free Translation-en
+Ign http://ftp.uk.debian.org sid/non-free Translation-fr
Hit http://ftp.debian-ports.org unreleased/main hurd-i386 Packages
Ign http://ftp.debian-ports.org unreleased/main TranslationIndex
-Get:2 http://incoming.debian.org Release [1604 B]
Ign http://ftp.debian-ports.org unreleased/main Translation-en
-Hit http://ftp.uk.debian.org unstable/contrib Sources/DiffIndex
-Hit http://ftp.uk.debian.org unstable/non-free Sources/DiffIndex
-Hit http://ftp.uk.debian.org unstable/main hurd-i386 Packages/DiffIndex
-Hit http://ftp.uk.debian.org unstable/main TranslationIndex
-Get:3 http://incoming.debian.org Sources [50.0 kB]
-Hit http://ftp.uk.debian.org experimental/main Sources/DiffIndex
-Hit http://ftp.uk.debian.org experimental/contrib Sources/DiffIndex
-Hit http://ftp.uk.debian.org experimental/non-free Sources/DiffIndex
-Get:4 http://incoming.debian.org Packages [773 kB]
+Ign http://ftp.debian-ports.org unreleased/main Translation-fr
Ign http://incoming.debian.org Translation-en
-Fetched 824 kB in 2min 24s (5708 B/s)
+Ign http://incoming.debian.org Translation-fr
+Fetched 540 kB in 1min 12s (7414 B/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -80,11 +88,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (59.6 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (98.4 kB/s)
Download complete and in download only mode
Check arch
@@ -99,91 +107,41 @@ Build-Depends: cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed source dependencies...
cdbs: missing
-debhelper: missing
-Using default version 8.1.3
+debhelper: already installed (8.1.2 >= 8 is satisfied)
zlib1g-dev: missing
Checking for source dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: cdbs zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libboost-iostreams1.42.0 libssl1.0.0
+ libpopt0 libwrap0 liblzo2-2 libsysfs2 libssl1.0.0 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
-The following extra packages will be installed:
- file gettext gettext-base html2text intltool-debian libcroco3 libexpat1
- libglib2.0-0 libmagic1 libunistring0 libxml2 po-debconf
Suggested packages:
- devscripts doc-base dh-make gettext-doc libmail-box-perl
+ devscripts
Recommended packages:
- autotools-dev autopoint libglib2.0-data shared-mime-info xml-core
- libmail-sendmail-perl
+ autotools-dev
The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base html2text intltool-debian libcroco3
- libexpat1 libglib2.0-0 libmagic1 libunistring0 libxml2 po-debconf zlib1g-dev
-0 upgraded, 15 newly installed, 0 to remove and 42 not upgraded.
-Need to get 0 B/7891 kB of archives.
-After this operation, 22.1 MB of additional disk space will be used.
+ cdbs zlib1g-dev
+0 upgraded, 2 newly installed, 0 to remove and 68 not upgraded.
+Need to get 0 B/262 kB of archives.
+After this operation, 803 kB of additional disk space will be used.
WARNING: The following packages cannot be authenticated!
- libmagic1 file gettext-base libxml2 html2text libglib2.0-0 libcroco3
- libexpat1 libunistring0 gettext intltool-debian po-debconf debhelper cdbs
- zlib1g-dev
-debconf: delaying package configuration, since apt-utils is not installed
+ cdbs zlib1g-dev
Authentication warning overridden.
-Selecting previously deselected package libmagic1.
-(Reading database ... 11575 files and directories currently installed.)
-Unpacking libmagic1 (from .../libmagic1_5.03-5+b1_hurd-i386.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.03-5+b1_hurd-i386.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_hurd-i386.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_hurd-i386.deb) ...
-Selecting previously deselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15+b1_hurd-i386.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_hurd-i386.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_hurd-i386.deb) ...
-Selecting previously deselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7_hurd-i386.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_hurd-i386.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_hurd-i386.deb) ...
-Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+(Reading database ... 14489 files and directories currently installed.)
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_hurd-i386.deb) ...
Processing triggers for man-db ...
-Processing triggers for install-info ...
-Setting up libmagic1 (5.03-5+b1) ...
-Setting up file (5.03-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up html2text (1.3.2a-15+b1) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libexpat1 (2.0.1-7) ...
-Setting up libunistring0 (0.9.3-3) ...
-Setting up gettext (0.18.1.1-3) ...
-Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Checking correctness of source dependencies...
Kernel: GNU 0.3 hurd-i386 (i686-AT386)
-Toolchain package versions: libc0.3-dev_2.11.2-13 dpkg-dev_1.16.0.1 hurd-dev_20110303-1~1 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gcc-4.4_4.4.5-10 g++-4.4_4.4.5-10 binutils_2.21.0.20110327-2 libstdc++6-4.4-dev_4.4.5-10 libstdc++6_4.5.2-4
-Package versions: adduser_3.112+nmu2 apt_0.8.13.2 base-files_6.1 base-passwd_3.5.22 bash_4.1-3+hurd.1 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.16.2-0 build-essential_11.5 bzip2_1.0.5-6 ca-certificates_20090814+nmu2 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-7 cpp-4.4_4.4.5-10 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.6-2 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2011.01.12 debianutils_3.4.3 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.12.4 file_5.03-5+b1 findutils_4.4.2-1+b1 g++_4:4.4.5-2 g++-4.4_4.4.5-10 gawk_1:3.1.7.dfsg-5 gcc_4:4.4.5-4 gcc-4.2-base_4.2.4-6+b1 gcc-4.4_4.4.5-10 gcc-4.4-base_4.4.5-10 gcc-4.5-base_4.5.2-4 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gfortran_4:4.4.5-4 gfortran-4.4_4.4.5-10 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gnupg_1.4.10-4 gnupg-curl_1.4.10-4 gpgv_1.4.10-4 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.05 html2text_1.3.2a-15+b1 hurd_20110319-2 hurd-dev_20110303-1~1 ifupdown_0.6.9+hurd.1 inetutils-tools_2:1.8-3 initscripts_2.88dsf-13.1 insserv_1.14.0-2 install-info_4.13a.dfsg.1-6 intltool-debian_0.35.0+20060710.1 libacl1_2.2.47-3 libattr1_1:2.4.44-2 libblkid1_2.16.2-0 libboost-iostreams1.42.0_1.42.0-4 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc0.3_2.11.2-13 libc0.3-dev_2.11.2-13 libc0.3-xen_2.11.2-13 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libcurl3-gnutls_7.21.4-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libexpat1_2.0.1-7 libfribidi0_0.19.2-1 libgcc1_1:4.4.5-10 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgfortran3_4.4.5-10 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-1 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.4-2 libgomp1_4.4.5-10 libgpg-error0_1.10-0.3 libident_0.22-3 libidn11_1.20-1 libldap-2.4-2_2.4.17-1 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 liblzo2-2_2.04-1 libmagic1_5.03-5+b1 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libncursesw5_5.8+20110307-1 libnewt0.52_0.52.11-2 libpam-modules_1.1.1-6.1 libpam-runtime_1.1.1-6.1 libpam0g_1.1.2-2 libparted0debian1_2.3-3+hurd.1 libpcre3_8.12-3+b1 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libpopt0_1.16-1 libpthread-stubs0_0.3-2 libpthread-stubs0-dev_0.3-2 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsasl2-modules_2.1.23.dfsg1-8 libslang2_2.2.3-3 libss2_1.41.12-2 libssl0.9.8_0.9.8o-5 libssl1.0.0_1.0.0d-1 libstdc++6_4.5.2-4 libstdc++6-4.4-dev_4.4.5-10 libsysfs2_2.1.0+repack-1 libtasn1-3_2.9-2 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4p_2:0.1.12-13+hurd.1 libuuid1_2.16.2-0 libwrap0_7.6.dbs-8 libxml2_2.7.8.dfsg-2 lsb-base_3.2-27 make_3.81-8 man-db_2.5.9-4 mawk_1.3.3-15 ncurses-base_5.7+20100313-5 ncurses-bin_5.8+20110307-1 netbase_4.45 netcat-traditional_1.10-39 openssl_0.9.8o-4 passwd_1:4.1.4.2+svn3283-2 patch_2.6-3 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.3-1 readline-common_6.1-3 sed_4.2.1-8 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-2 tzdata_2011a-1 util-linux_2.16.2-0 wget_1.11.4-4 whiptail_0.52.11-2 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: libc0.3-dev_2.11.2-13 dpkg-dev_1.16.0.2 hurd-dev_20110303-1~1 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gcc-4.6_4.6.0-6 g++-4.6_4.6.0-6 binutils_2.21.51.20110419-2 libstdc++6-4.6-dev_4.6.0-6 libstdc++6_4.6.0-6
+Package versions: adduser_3.112+nmu1 apt_0.8.13.2 apt-utils_0.8.13.2 base-files_5.9 base-passwd_3.5.22 bash_4.1-3+hurd.1 binutils_2.21.51.20110419-2 bsd-mailx_8.1.2-0.20100314cvs-1 bsdmainutils_8.0.13 bsdutils_1:2.16.2-0 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.5-10 cpp-4.5_4.5.3-1 cpp-4.6_4.6.0-6 cron_3.0pl1-116 dash_0.5.5.1-7 debconf_1.5.35 debconf-english_1.5.35 debfoster_2.6-2 debhelper_8.1.2 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2011.01.12 debianutils_3.4.1 deborphan_1.7.28 dialog_1.1-20100428-1 diffutils_1:3.0-1 dpkg_1.15.8.5 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-3 e2fsprogs_1.41.12-3 exim4-base_4.72-3+b1 exim4-config_4.72-3 exim4-daemon-light_4.72-3+b1 fakeroot_1.15.1-1 file_5.03-5+b1 findutils_4.4.2-1 fontconfig_2.8.0-2.2 fontconfig-config_2.8.0-2.2 g++_4:4.4.4-2 g++-4.4_4.4.5-10 g++-4.5_4.5.3-1 g++-4.6_4.6.0-6 gawk_1:3.1.7.dfsg-5 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6+b1 gcc-4.4_4.4.5-10 gcc-4.4-base_4.4.5-10 gcc-4.5_4.5.3-1 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gfortran-4.4_4.4.5-10 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gnupg_1.4.10-4 gobjc-4.4_4.4.5-10 gpgv_1.4.10-4 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.04 html2text_1.3.2a-15+b1 hurd_20110319-1 hurd-dev_20110303-1~1 initscripts_2.88dsf-12 insserv_1.14.0-2 install-info_4.13a.dfsg.1-5 intltool-debian_0.35.0+20060710.1 libacl1_2.2.47-3 libattr1_1:2.4.44-2 libblkid1_2.16.2-0 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc0.3_2.11.2-13 libc0.3-dev_2.11.2-13 libc0.3-xen_2.11.2-13 libcloog-ppl0_0.15.9-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-6 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libelfg0_0.8.13-1 libexpat1_2.0.1-7 libfontconfig1_2.8.0-2.2 libfreetype6_2.4.4-1 libgcc1_1:4.6.0-6 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgfortran3_4.6.0-6 libglib2.0-0_2.28.6-1 libglib2.0-data_2.28.0-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-1+b1 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.4-2 libgomp1_4.6.0-6 libgpg-error0_1.10-0.3 libldap-2.4-2_2.4.17-1 liblockfile1_1.08-4 liblzma2_5.0.0-2 liblzo2-2_2.04-1 libmagic1_5.03-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libobjc2_4.4.5-10 libpam-modules_1.1.1-6 libpam-runtime_1.1.1-6 libpam0g_1.1.2-3 libparted0debian1_2.3-3+hurd.1 libpcre3_8.12-3+b1 libpng12-0_1.2.44-2 libpopt0_1.16-1 libppl-c2_0.10.2-9 libppl7_0.10.2-9 libpthread-stubs0_0.3-2 libpthread-stubs0-dev_0.3-2 libquadmath0_4.6.0-6 libreadline6_6.2-1 libsasl2-2_2.1.23.dfsg1-8 libsasl2-modules_2.1.23.dfsg1-8 libslang2_2.2.4-2 libss2_1.41.12-2 libssl0.9.8_0.9.8o-5 libssl1.0.0_1.0.0d-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.5-10 libstdc++6-4.5-dev_4.5.3-1 libstdc++6-4.6-dev_4.6.0-6 libsysfs2_2.1.0+repack-1 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4p_2:0.1.12-13+hurd.1 libuuid1_2.16.2-0 libwrap0_7.6.dbs-14+hurd.2 libxml2_2.7.8.dfsg-2+b1 lsb-base_3.2-25 make_3.81-8 man-db_2.5.7-4 mawk_1.3.3-15 ncurses-base_5.7+20100313-4 ncurses-bin_5.9-1 netbase_4.42 netcat-traditional_1.10-39 passwd_1:4.1.4.2+svn3283-2 patch_2.6-3 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16 procps_1:3.2.7-11 psmisc_22.3-1 readline-common_6.1-3 sed_4.2.1-7 sensible-utils_0.0.4 sgml-base_1.26+nmu1 shared-mime-info_0.71-3 sudo_1.7.2p7-1 sysv-rc_2.88dsf-12 sysvinit_2.88dsf-12 sysvinit-utils_2.88dsf-12 tar_1.23-3 ttf-freefont_20090104-7 type-handling_0.2.23 tzdata_2010m-1 ucf_3.0025+nmu1 util-linux_2.16.2-0 xml-core_0.13 xz-utils_4.999.9beta+20100810-1 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -195,12 +153,12 @@ Unpack source
dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -215,39 +173,41 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture hurd-i386
/usr/bin/fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
dh_clean
debian/rules build
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
test -x debian/rules
mkdir -p "."
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
touch debian/stamp-makefile-build
/usr/bin/fakeroot debian/rules binary-arch
DEB_MAKE_CHECK_TARGET unset, not running checks
@@ -292,58 +252,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_hurd-i386.deb'.
- dpkg-genchanges -B -mhurd-i386 Build Daemon <buildd_hurd-i386-rossini at buildd.debian.org> >../tabix_0.2.4-1_hurd-i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_hurd-i386.deb'.
+ dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org> >../tabix_0.2.5-1_hurd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-1100
+Build finished at 20110510-1126
-tabix_0.2.4-1_hurd-i386.changes:
+tabix_0.2.5-1_hurd-i386.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: hurd-i386
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: hurd-i386 Build Daemon <buildd_hurd-i386-rossini at buildd.debian.org>
+Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 86e9ec8164bc5de03ddd6d32aff1c9fe01e3de9f 55202 tabix_0.2.4-1_hurd-i386.deb
+ 08ed9a6fc9c05d384e3a90540df32433e5f805e8 60130 tabix_0.2.5-1_hurd-i386.deb
Checksums-Sha256:
- e9680fc26e5e1ea0a39fb0f9fb1c69c583b3759e6db568da98eb8b864b574ed0 55202 tabix_0.2.4-1_hurd-i386.deb
+ 790f0450477baa7be3e6f6ef44dba3eb362e6eeac12ba41c114851ed02ed7445 60130 tabix_0.2.5-1_hurd-i386.deb
Files:
- 3d952f0c9554a884cbd25b6ba06cd688 55202 science optional tabix_0.2.4-1_hurd-i386.deb
+ 01d7a1ba007c16cadbe5efe88109119c 60130 science optional tabix_0.2.5-1_hurd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_hurd-i386.deb
+tabix_0.2.5-1_hurd-i386.deb
───────────────────────────
new debian package, version 2.0.
- size 55202 bytes: control archive= 971 bytes.
+ size 60130 bytes: control archive= 1003 bytes.
792 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: hurd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 156
+ Installed-Size: 168
Depends: libc0.3 (>= 2.11), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -356,25 +315,26 @@ tabix_0.2.4-1_hurd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 11:00 ./
-drwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 10:59 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 10:59 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 10:59 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 10:59 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 11:00 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/bin/
--rwxr-xr-x root/root 60952 2011-04-12 11:00 ./usr/bin/tabix
--rwxr-xr-x root/root 22280 2011-04-12 11:00 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:26 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/bin/
+-rwxr-xr-x root/root 68324 2011-05-10 11:26 ./usr/bin/tabix
+-rwxr-xr-x root/root 24272 2011-05-10 11:26 ./usr/bin/bgzip
+lrwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -383,34 +343,12 @@ lrwxr-xr-x root/root 0 2011-04-12 11:00 ./usr/share/man/man1/bgzip.1.gz
Built successfully
────────────────────────────────────────────────────────────────────────────────
-Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.4-1-hurd-i386-nrTxuR
-(Reading database ... 12465 files and directories currently installed.)
-Removing zlib1g-dev ...
+Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7
+(Reading database ... 14574 files and directories currently installed.)
Removing cdbs ...
-Removing debhelper ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing file ...
-Purging configuration files for file ...
-Removing libexpat1 ...
-Purging configuration files for libexpat1 ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing gettext-base ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
+Removing zlib1g-dev ...
Processing triggers for man-db ...
-Processing triggers for install-info ...
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-1100
-Build needed 00:07:34, 1248k disc space
+Finished at 20110510-1126
+Build needed 00:04:29, 1404k disc space
diff --git a/i386.log b/i386.log
index 1842064..1e8e722 100644
--- a/i386.log
+++ b/i386.log
@@ -1,68 +1,68 @@
-From buildd at biber.debian.org Tue Apr 12 09:46:06 2011
+From buildd at biber.debian.org Tue May 10 11:18:26 2011
Return-path: <buildd at biber.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at biber.debian.org>)
- id 1Q9aAg-00038e-6N
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:46:06 +0000
+ (Exim 4.72) (envelope-from <buildd at biber.debian.org>)
+ id 1QJkxO-0006Xz-4t
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:26 +0000
Received: from biber.debian.org ([2001:648:2ffc:deb:214:22ff:feb2:1268])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=biber.debian.org, EMAIL=hostmaster at biber.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at biber.debian.org>)
- id 1Q9aAb-0001ap-Ln; Tue, 12 Apr 2011 09:46:01 +0000
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at biber.debian.org>)
+ id 1QJkxM-00077y-S5; Tue, 10 May 2011 11:18:25 +0000
Received: from buildd by biber.debian.org with local (Exim 4.72)
(envelope-from <buildd at biber.debian.org>)
- id 1Q9aAY-0002B7-G2; Tue, 12 Apr 2011 09:45:58 +0000
-Message-Id: <E1Q9aAY-0002B7-G2 at biber.debian.org>
+ id 1QJkxL-0002ZA-Up; Tue, 10 May 2011 11:18:23 +0000
+Message-Id: <E1QJkxL-0002ZA-Up at biber.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 12 Apr 2011 09:45:58 +0000
+Date: Tue, 10 May 2011 11:18:23 +0000
From: buildd on biber <buildd at biber.debian.org>
To: kurt at roeckx.be,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on i386 (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-1 on i386 (dist=sid)
Key-Id: 44C3EAC7
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on biber.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (i386) 12 Apr 2011 09:44 ║
+║ tabix 0.2.5-1 (i386) 10 May 2011 11:16 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: i386
-Get:1 http://ftp.gr.debian.org unstable InRelease [151 kB]
-Get:2 http://ftp.gr.debian.org unstable/main Sources [5264 kB]
-Get:3 http://incoming.debian.org unstable InRelease [151 kB]
-Get:4 http://ftp.gr.debian.org unstable/contrib Sources [48.2 kB]
-Get:5 http://ftp.gr.debian.org unstable/non-free Sources [97.4 kB]
-Get:6 http://ftp.gr.debian.org unstable/main i386 Packages [7150 kB]
-Get:7 http://ftp.gr.debian.org unstable/contrib i386 Packages [62.6 kB]
+Get:1 http://ftp.gr.debian.org unstable InRelease [167 kB]
+Get:2 http://ftp.gr.debian.org unstable/main Sources [5657 kB]
+Get:3 http://ftp.gr.debian.org unstable/contrib Sources [51.4 kB]
+Get:4 http://ftp.gr.debian.org unstable/non-free Sources [97.1 kB]
+Get:5 http://ftp.gr.debian.org unstable/main i386 Packages [7282 kB]
+Get:6 http://incoming.debian.org unstable InRelease [167 kB]
+Get:7 http://ftp.gr.debian.org unstable/contrib i386 Packages [64.7 kB]
Ign http://ftp.gr.debian.org unstable/contrib TranslationIndex
Get:8 http://ftp.gr.debian.org unstable/main TranslationIndex [2264 B]
Ign http://ftp.gr.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org InRelease
Get:9 http://incoming.debian.org Release.gpg [836 B]
-Get:10 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main i386 Packages [7149 kB]
-Get:14 http://incoming.debian.org unstable/contrib i386 Packages [62.6 kB]
+Get:10 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main i386 Packages [7282 kB]
+Get:14 http://incoming.debian.org unstable/contrib i386 Packages [64.7 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [49.0 kB]
-Get:18 http://incoming.debian.org Packages [775 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 26.4 MB in 18s (1443 kB/s)
+Fetched 27.2 MB in 13s (2023 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -83,11 +83,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (62.2 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (63.0 kB/s)
Download complete and in download only mode
Check arch
@@ -107,12 +107,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -121,38 +121,38 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.2)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.1)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
-ncurses-bin: already installed (5.8+20110307-1)
-perl-base: already installed (5.10.1-19)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-11)
-gcc: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.16.0.1 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
@@ -164,8 +164,8 @@ The following extra packages will be installed:
libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make gettext-doc
- groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl
@@ -173,57 +173,57 @@ The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 8 not upgraded.
-Need to get 10.2 MB of archives.
-After this operation, 28.5 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 10 not upgraded.
+Need to get 9047 kB of archives.
+After this operation, 27.2 MB of additional disk space will be used.
Get:1 http://ftp.gr.debian.org/debian/ unstable/main bsdmainutils i386 8.2.2 [200 kB]
Get:2 http://ftp.gr.debian.org/debian/ unstable/main groff-base i386 1.21-5 [1125 kB]
Get:3 http://ftp.gr.debian.org/debian/ unstable/main libpipeline1 i386 1.2.0-1 [35.6 kB]
-Get:4 http://ftp.gr.debian.org/debian/ unstable/main man-db i386 2.6.0.1-1 [991 kB]
-Get:5 http://ftp.gr.debian.org/debian/ unstable/main libmagic1 i386 5.04-5 [234 kB]
-Get:6 http://ftp.gr.debian.org/debian/ unstable/main file i386 5.04-5 [49.1 kB]
+Get:4 http://ftp.gr.debian.org/debian/ unstable/main man-db i386 2.6.0.2-1 [991 kB]
+Get:5 http://ftp.gr.debian.org/debian/ unstable/main libmagic1 i386 5.04-5+b1 [233 kB]
+Get:6 http://ftp.gr.debian.org/debian/ unstable/main file i386 5.04-5+b1 [49.4 kB]
Get:7 http://ftp.gr.debian.org/debian/ unstable/main gettext-base i386 0.18.1.1-3 [130 kB]
Get:8 http://ftp.gr.debian.org/debian/ unstable/main libpcre3 i386 8.12-3 [255 kB]
-Get:9 http://ftp.gr.debian.org/debian/ unstable/main libxml2 i386 2.7.8.dfsg-2 [827 kB]
+Get:9 http://ftp.gr.debian.org/debian/ unstable/main libxml2 i386 2.7.8.dfsg-2+b1 [831 kB]
Get:10 http://ftp.gr.debian.org/debian/ unstable/main html2text i386 1.3.2a-15 [101 kB]
-Get:11 http://ftp.gr.debian.org/debian/ unstable/main libglib2.0-0 i386 2.28.4-1 [1498 kB]
+Get:11 http://ftp.gr.debian.org/debian/ unstable/main libglib2.0-0 i386 2.28.6-1 [1503 kB]
Get:12 http://ftp.gr.debian.org/debian/ unstable/main libcroco3 i386 0.6.2-1 [116 kB]
-Get:13 http://ftp.gr.debian.org/debian/ unstable/main libunistring0 i386 0.9.3-3 [433 kB]
+Get:13 http://ftp.gr.debian.org/debian/ unstable/main libunistring0 i386 0.9.3-4 [431 kB]
Get:14 http://ftp.gr.debian.org/debian/ unstable/main gettext i386 0.18.1.1-3 [1973 kB]
Get:15 http://ftp.gr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
Get:16 http://ftp.gr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://ftp.gr.debian.org/debian/ unstable/main debhelper all 8.1.3 [554 kB]
-Get:18 http://ftp.gr.debian.org/debian/ unstable/main cdbs all 0.4.92 [1268 kB]
+Get:17 http://ftp.gr.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://ftp.gr.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
Get:19 http://ftp.gr.debian.org/debian/ unstable/main zlib1g-dev i386 1:1.2.3.4.dfsg-3 [186 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 10.2 MB in 3s (2767 kB/s)
+Fetched 9047 kB in 1s (7303 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10201 files and directories currently installed.)
+(Reading database ... 10641 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_i386.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_i386.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_i386.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_i386.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_i386.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_i386.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_i386.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_i386.deb) ...
+Unpacking file (from .../file_5.04-5+b1_i386.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_i386.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_i386.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_i386.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_i386.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_i386.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_i386.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_i386.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_i386.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_i386.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_i386.deb) ...
Selecting previously deselected package intltool-debian.
@@ -231,9 +231,9 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously deselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_i386.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -241,33 +241,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-amd64 i386 (x86_64)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.5_4.5.2-8 gcc-4.5_4.5.2-8 libc6-dev_2.11.2-11 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 linux-libc-dev_2.6.38-2
-Package versions: apt_0.8.13.2 base-files_6.2 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.5.2-5 cpp-4.5_4.5.2-8 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.1 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.5.2-5 g++-4.5_4.5.2-8 gcc_4:4.5.2-5 gcc-4.5_4.5.2-8 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libelfg0_0.8.13-1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpc2_0.9-2 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.3-2 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011e-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-6 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-6 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -278,12 +278,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -298,39 +298,41 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture i386
fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-i386-bfvTRB/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -357,6 +359,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -375,22 +378,22 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_i386.deb'.
- dpkg-genchanges -B -mi386 Build Daemon <buildd_i386-biber at buildd.debian.org> >../tabix_0.2.4-1_i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_i386.deb'.
+ dpkg-genchanges -B -mi386 Build Daemon <buildd_i386-biber at buildd.debian.org> >../tabix_0.2.5-1_i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0945
+Build finished at 20110510-1118
-tabix_0.2.4-1_i386.changes:
+tabix_0.2.5-1_i386.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: i386
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
Maintainer: i386 Build Daemon <buildd_i386-biber at buildd.debian.org>
@@ -398,35 +401,34 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- b38e1b9b55be88e2c2123413e36f0b9974527081 54176 tabix_0.2.4-1_i386.deb
+ ca0acd05ef77ea1ac4e8e02c376664f54ff9c9e3 59818 tabix_0.2.5-1_i386.deb
Checksums-Sha256:
- 8e713ab0e7d469e5b131d6fbdc14228bf9fb2ad6aa78ebf453fd37689281e62e 54176 tabix_0.2.4-1_i386.deb
+ d5818d4aa5f23713862a040e30058c638813f897124f9e018b445f341233918d 59818 tabix_0.2.5-1_i386.deb
Files:
- d1a6576653602687a5fb59b60c4dc32e 54176 science optional tabix_0.2.4-1_i386.deb
+ 5f885cdf9603e292efd9a7d083c7e778 59818 science optional tabix_0.2.5-1_i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_i386.deb
+tabix_0.2.5-1_i386.deb
──────────────────────
new debian package, version 2.0.
- size 54176 bytes: control archive= 958 bytes.
+ size 59818 bytes: control archive= 991 bytes.
784 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 156
+ Installed-Size: 168
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -439,25 +441,26 @@ tabix_0.2.4-1_i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/bin/
--rwxr-xr-x root/root 57620 2011-04-12 09:45 ./usr/bin/tabix
--rwxr-xr-x root/root 22276 2011-04-12 09:45 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 68216 2011-05-10 11:17 ./usr/bin/tabix
+-rwxr-xr-x root/root 24164 2011-05-10 11:17 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:45 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:45 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2011-04-12 09:45 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -471,7 +474,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-i386-sbuild-0658a39d-fc72-4166-bdde-2ced3200b93b/build/buildd-tabix_0.2.4-1-i386-bfvTRB
+Purging /var/lib/schroot/mount/sid-i386-sbuild-9e553c1f-b31c-4c5c-851e-1fce8607b12f/build/buildd-tabix_0.2.5-1-i386-UkeebA
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -479,18 +482,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: i386
-Build-Space: 1316
+Build-Space: 1404
Build-Time: 13
Distribution: sid
-Install-Time: 38
-Job: tabix_0.2.4-1
+Install-Time: 35
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 79
-Source-Version: 0.2.4-1
-Space: 1316
+Package-Time: 75
+Source-Version: 0.2.5-1
+Space: 1404
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0945
-Build needed 00:01:19, 1316k disc space
+Finished at 20110510-1118
+Build needed 00:01:15, 1404k disc space
Signature with key '44C3EAC7' requested:
diff --git a/ia64.log b/ia64.log
index b592487..04507af 100644
--- a/ia64.log
+++ b/ia64.log
@@ -1,67 +1,66 @@
-From buildd at alkman.debian.org Tue Apr 12 09:50:58 2011
-Return-path: <buildd at alkman.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at caballero.debian.org Tue May 10 11:18:12 2011
+Return-path: <buildd at caballero.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at alkman.debian.org>)
- id 1Q9aFO-00040N-Hg
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:50:58 +0000
-Received: from alkman.debian.org ([192.25.206.63])
+ (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
+ id 1QJkxA-0006VD-6p
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:12 +0000
+Received: from caballero.debian.org ([193.201.200.200])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=alkman.debian.org, EMAIL=hostmaster at alkman.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at alkman.debian.org>)
- id 1Q9aFH-000367-FW
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:50:52 +0000
-Received: from buildd by alkman.debian.org with local (Exim 4.72)
- (envelope-from <buildd at alkman.debian.org>)
- id 1Q9aFF-0002H8-Am; Tue, 12 Apr 2011 09:50:49 +0000
-Date: Tue, 12 Apr 2011 09:50:49 +0000
-Message-Id: <E1Q9aFF-0002H8-Am at alkman.debian.org>
-From: buildd on alkman <buildd at alkman.debian.org>
-To: buildd-porters at alkman.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on ia64 (dist=sid)
+ CN=caballero.debian.org,
+ EMAIL=hostmaster at caballero.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.69) (envelope-from <buildd at caballero.debian.org>)
+ id 1QJkxB-0003dP-ML; Tue, 10 May 2011 11:18:13 +0000
+Received: from buildd by caballero.debian.org with local (Exim 4.69)
+ (envelope-from <buildd at caballero.debian.org>) id 1QJkx3-0002Cw-21
+ for buildd-porters at caballero.debian.org; Tue, 10 May 2011 11:18:05 +0000
+From: buildd on caballero <buildd at caballero.debian.org>
+To: buildd-porters at caballero.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on ia64 (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
+Message-Id: <E1QJkx3-0002Cw-21 at caballero.debian.org>
+Date: Tue, 10 May 2011 11:18:05 +0000
+Delivered-To: buildd-porters at caballero.debian.org
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on alkman.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on caballero.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (ia64) 12 Apr 2011 09:48 ║
+║ tabix 0.2.5-1 (ia64) 10 May 2011 11:16 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: ia64
-Get:1 http://spohr.debian.org unstable InRelease [151 kB]
-Get:2 http://incoming.debian.org unstable InRelease [151 kB]
-Get:3 http://spohr.debian.org unstable/main Sources [5265 kB]
-Get:4 http://spohr.debian.org unstable/contrib Sources [48.2 kB]
-Get:5 http://spohr.debian.org unstable/non-free Sources [97.4 kB]
-Get:6 http://spohr.debian.org unstable/main ia64 Packages [6981 kB]
+Hit http://mirror.positive-internet.com sid InRelease
+Hit http://mirror.positive-internet.com sid/main Sources/DiffIndex
+Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Get:7 http://incoming.debian.org Release.gpg [836 B]
-Get:8 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:9 http://spohr.debian.org unstable/contrib ia64 Packages [52.9 kB]
-Ign http://spohr.debian.org unstable/contrib TranslationIndex
-Get:10 http://spohr.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://spohr.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main ia64 Packages [6981 kB]
-Get:14 http://incoming.debian.org unstable/contrib ia64 Packages [52.9 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [49.0 kB]
-Get:18 http://incoming.debian.org Packages [775 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Hit http://mirror.positive-internet.com sid/contrib Sources/DiffIndex
+Hit http://mirror.positive-internet.com sid/main ia64 Packages/DiffIndex
+Hit http://mirror.positive-internet.com sid/contrib ia64 Packages/DiffIndex
+Ign http://mirror.positive-internet.com sid/contrib TranslationIndex
+Hit http://mirror.positive-internet.com sid/main TranslationIndex
+Get:1 http://incoming.debian.org Release.gpg [836 B]
+Ign http://mirror.positive-internet.com sid/contrib Translation-en
+Hit http://incoming.debian.org sid/main Sources/DiffIndex
+Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
+Hit http://incoming.debian.org sid/main ia64 Packages/DiffIndex
+Hit http://incoming.debian.org sid/contrib ia64 Packages/DiffIndex
+Ign http://incoming.debian.org sid/contrib TranslationIndex
+Hit http://incoming.debian.org sid/main TranslationIndex
+Get:2 http://incoming.debian.org Release [1604 B]
+Get:3 http://incoming.debian.org Sources [27.9 kB]
+Get:4 http://incoming.debian.org Packages [545 kB]
+Ign http://incoming.debian.org sid/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 26.0 MB in 23s (1129 kB/s)
+Fetched 575 kB in 6s (82.4 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -82,11 +81,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (111 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (101 kB/s)
Download complete and in download only mode
Check arch
@@ -106,12 +105,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -120,38 +119,38 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.2)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.1)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
-ncurses-bin: already installed (5.8+20110307-1)
-perl-base: already installed (5.10.1-19)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6.1-dev: already installed (2.11.2-13)
-gcc: already installed (4:4.4.5-7 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-7 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.16.0.1 >= 1.13.5 is satisfied)
+libc6.1-dev: already installed (2.13-2)
+gcc: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
@@ -163,8 +162,8 @@ The following extra packages will be installed:
libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make gettext-doc
- groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl
@@ -172,57 +171,37 @@ The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 6 not upgraded.
-Need to get 12.3 MB of archives.
-After this operation, 41.3 MB of additional disk space will be used.
-Get:1 http://spohr.debian.org/debian/ unstable/main bsdmainutils ia64 8.2.2 [236 kB]
-Get:2 http://spohr.debian.org/debian/ unstable/main groff-base ia64 1.21-5 [1440 kB]
-Get:3 http://spohr.debian.org/debian/ unstable/main libpipeline1 ia64 1.2.0-1 [47.2 kB]
-Get:4 http://spohr.debian.org/debian/ unstable/main man-db ia64 2.6.0.1-1 [1122 kB]
-Get:5 http://spohr.debian.org/debian/ unstable/main libmagic1 ia64 5.04-5 [263 kB]
-Get:6 http://spohr.debian.org/debian/ unstable/main file ia64 5.04-5 [51.9 kB]
-Get:7 http://spohr.debian.org/debian/ unstable/main gettext-base ia64 0.18.1.1-3 [174 kB]
-Get:8 http://spohr.debian.org/debian/ unstable/main libpcre3 ia64 8.12-3 [316 kB]
-Get:9 http://spohr.debian.org/debian/ unstable/main libxml2 ia64 2.7.8.dfsg-2 [1181 kB]
-Get:10 http://spohr.debian.org/debian/ unstable/main html2text ia64 1.3.2a-15 [134 kB]
-Get:11 http://spohr.debian.org/debian/ unstable/main libglib2.0-0 ia64 2.28.4-1 [1972 kB]
-Get:12 http://spohr.debian.org/debian/ unstable/main libcroco3 ia64 0.6.2-1 [155 kB]
-Get:13 http://spohr.debian.org/debian/ unstable/main libunistring0 ia64 0.9.3-3 [469 kB]
-Get:14 http://spohr.debian.org/debian/ unstable/main gettext ia64 0.18.1.1-3 [2453 kB]
-Get:15 http://spohr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://spohr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://spohr.debian.org/debian/ unstable/main debhelper all 8.1.3 [554 kB]
-Get:18 http://spohr.debian.org/debian/ unstable/main cdbs all 0.4.92 [1268 kB]
-Get:19 http://spohr.debian.org/debian/ unstable/main zlib1g-dev ia64 1:1.2.3.4.dfsg-3 [224 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.3 MB in 0s (15.4 MB/s)
+0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/11.1 MB of archives.
+After this operation, 38.9 MB of additional disk space will be used.
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10045 files and directories currently installed.)
+(Reading database ... 10485 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_ia64.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_ia64.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_ia64.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_ia64.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_ia64.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_ia64.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_ia64.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_ia64.deb) ...
+Unpacking file (from .../file_5.04-5+b1_ia64.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_ia64.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_ia64.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_ia64.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_ia64.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_ia64.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_ia64.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_ia64.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_ia64.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_ia64.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_ia64.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_ia64.deb) ...
Selecting previously deselected package intltool-debian.
@@ -230,9 +209,9 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously deselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_ia64.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -240,33 +219,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-mckinley ia64 (ia64)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.4_4.4.5-15 gcc-4.4_4.4.5-15 libc6.1-dev_2.11.2-13 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 linux-libc-dev_2.6.38-2
-Package versions: apt_0.8.13.2 base-files_6.2 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-7 cpp-4.4_4.4.5-15 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.1 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.4.5-7 g++-4.4_4.4.5-15 gcc_4:4.4.5-7 gcc-4.4_4.4.5-15 gcc-4.4-base_4.4.5-15 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc6.1_2.11.2-13 libc6.1-dev_2.11.2-13 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.3-2 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libunwind7_0.99-0.2 libunwind7-dev_0.99-0.2 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011e-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32-bpo.5-mckinley ia64 (ia64)
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.4_4.4.6-3 gcc-4.4_4.4.6-3 libc6.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.4-dev_4.4.6-3 linux-libc-dev_2.6.38-5
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.4.5-9 cpp-4.4_4.4.6-3 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.4.5-9 g++-4.4_4.4.6-3 gcc_4:4.4.5-9 gcc-4.4_4.4.6-3 gcc-4.4-base_4.4.6-3 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6.1_2.13-2 libc6.1-dev_2.13-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-7 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.4-dev_4.4.6-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libunwind7_0.99-0.2 libunwind7-dev_0.99-0.2 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-5 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -276,13 +255,14 @@ Package versions: apt_0.8.13.2 base-files_6.2 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -291,48 +271,61 @@ Check disc space
dpkg-buildpackage
─────────────────
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture ia64
fakeroot debian/rules clean
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
dh_clean
debian/rules build
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-ia64-61j0_s/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
+Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
dh_testroot
dh_prep
@@ -356,6 +349,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -374,58 +368,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6.1 could be avoided if "debian/t
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_ia64.deb'.
- dpkg-genchanges -B -mia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org> >../tabix_0.2.4-1_ia64.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_ia64.deb'.
+ dpkg-genchanges -B -mia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org> >../tabix_0.2.5-1_ia64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0950
+Build finished at 20110510-1117
-tabix_0.2.4-1_ia64.changes:
+tabix_0.2.5-1_ia64.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: ia64
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: ia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org>
+Maintainer: ia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 66dea7fbd8bed6ccb9a3466d21da537b9de8d1ec 84440 tabix_0.2.4-1_ia64.deb
+ 972e15bb6a2a247fd9d72368e81f25d81608a4a7 88304 tabix_0.2.5-1_ia64.deb
Checksums-Sha256:
- 40bd5809b7adf179746c4fe440ca9678087c4def762d8fd35aa0f9e53973fa65 84440 tabix_0.2.4-1_ia64.deb
+ 76498611401e9caf577745b0995a554944c659ad7d8b74e1c19f82eceab3ec9f 88304 tabix_0.2.5-1_ia64.deb
Files:
- 719cfaf12398a97526dc38513ffcd23b 84440 science optional tabix_0.2.4-1_ia64.deb
+ 3fd2295fae3d9bc4a642e05aa0107b76 88304 science optional tabix_0.2.5-1_ia64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_ia64.deb
+tabix_0.2.5-1_ia64.deb
──────────────────────
new debian package, version 2.0.
- size 84440 bytes: control archive= 960 bytes.
+ size 88304 bytes: control archive= 995 bytes.
786 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: ia64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 320
+ Installed-Size: 272
Depends: libc6.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -438,25 +431,26 @@ tabix_0.2.4-1_ia64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/bin/
--rwxr-xr-x root/root 135728 2011-04-12 09:50 ./usr/bin/tabix
--rwxr-xr-x root/root 52096 2011-04-12 09:50 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:50 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-lrwxrwxrwx root/root 0 2011-04-12 09:50 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 141560 2011-05-10 11:17 ./usr/bin/tabix
+-rwxr-xr-x root/root 52096 2011-05-10 11:17 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -470,26 +464,69 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ia64-sbuild-4a9a445b-66d8-40cb-aaf1-160d11fa432a/build/buildd-tabix_0.2.4-1-ia64-61j0_s
-Not cleaning session: cloned chroot in use
+Purging /var/lib/schroot/mount/sid-ia64-sbuild-479ee363-3634-4c52-887a-c1460c82cd46/build/buildd-tabix_0.2.5-1-ia64-26qUW3
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages will be REMOVED:
+ bsdmainutils* cdbs* debhelper* file* gettext* gettext-base* groff-base*
+ html2text* intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3*
+ libpipeline1* libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 19 to remove and 0 not upgraded.
+After this operation, 38.9 MB disk space will be freed.
+(Reading database ... 11873 files and directories currently installed.)
+Removing cdbs ...
+Removing debhelper ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing bsdmainutils ...
+Purging configuration files for bsdmainutils ...
+Removing file ...
+Removing po-debconf ...
+Removing intltool-debian ...
+Removing gettext ...
+Removing gettext-base ...
+Removing groff-base ...
+Purging configuration files for groff-base ...
+Removing html2text ...
+Purging configuration files for html2text ...
+Removing libcroco3 ...
+Purging configuration files for libcroco3 ...
+Removing libglib2.0-0 ...
+Purging configuration files for libglib2.0-0 ...
+Removing libmagic1 ...
+Purging configuration files for libmagic1 ...
+Removing libpcre3 ...
+Purging configuration files for libpcre3 ...
+Removing libpipeline1 ...
+Purging configuration files for libpipeline1 ...
+Removing libunistring0 ...
+Purging configuration files for libunistring0 ...
+Removing libxml2 ...
+Purging configuration files for libxml2 ...
+Removing zlib1g-dev ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: ia64
-Build-Space: 2648
-Build-Time: 29
+Build-Space: 2000
+Build-Time: 27
Distribution: sid
-Install-Time: 55
-Job: tabix_0.2.4-1
+Install-Time: 20
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 133
-Source-Version: 0.2.4-1
-Space: 2648
+Package-Time: 62
+Source-Version: 0.2.5-1
+Space: 2000
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0950
-Build needed 00:02:13, 2648k disc space
+Finished at 20110510-1117
+Build needed 00:01:02, 2000k disc space
diff --git a/info b/info
index 37c7420..f6dc4c8 100644
--- a/info
+++ b/info
@@ -1,11 +1,13 @@
-i386~1302601576~sid~successful
-powerpc~1302601583~sid~successful
-kfreebsd-i386~1302601711~sid~successful
-s390~1302601826~sid~successful
-ia64~1302601859~sid~successful
-kfreebsd-amd64~1302601979~sid~successful
-sparc~1302602242~sid~successful
-armel~1302603948~sid~successful
-hurd-i386~1302606089~sid~successful
-mips~1302607404~sid~successful
-mipsel~1302632167~sid~successful
+powerpc~1305026131~sid~successful
+kfreebsd-i386~1305026218~sid~successful
+s390~1305026231~sid~successful
+kfreebsd-amd64~1305026245~sid~successful
+armel~1305026289~sid~successful
+ia64~1305026293~sid~successful
+mips~1305026299~sid~successful
+i386~1305026306~sid~successful
+mipsel~1305026332~sid~successful
+sparc~1305026422~sid~successful
+hurd-i386~1305026823~sid~successful
+s390x~1322356912~sid~successful
+armhf~1322455384~sid~successful
diff --git a/kfreebsd-amd64.log b/kfreebsd-amd64.log
index 90e0765..ec324cb 100644
--- a/kfreebsd-amd64.log
+++ b/kfreebsd-amd64.log
@@ -1,57 +1,60 @@
-From buildd at fasch.debian.org Tue Apr 12 09:52:58 2011
-Return-path: <buildd at fasch.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+From buildd at fano.debian.org Tue May 10 11:17:24 2011
+Return-path: <buildd at fano.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at fasch.debian.org>)
- id 1Q9aHK-0004Rj-Hv
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:52:58 +0000
-Received: from fasch.debian.org ([194.177.211.201])
+ (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
+ id 1QJkwO-0006No-FR
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:17:24 +0000
+Received: from fano.debian.org ([206.12.19.110])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=fasch.debian.org, EMAIL=hostmaster at fasch.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at fasch.debian.org>)
- id 1Q9aHG-0001nD-43; Tue, 12 Apr 2011 09:52:54 +0000
-Received: from buildd by fasch.debian.org with local (Exim 4.72)
- (envelope-from <buildd at fasch.debian.org>)
- id 1Q9aHD-000Cni-6M; Tue, 12 Apr 2011 09:52:51 +0000
-Date: Tue, 12 Apr 2011 09:52:51 +0000
-Message-Id: <E1Q9aHD-000Cni-6M at fasch.debian.org>
-From: buildd on fasch <buildd at fasch.debian.org>
-To: logs at buildd.debian.org,aurelien at aurel32.net,kibi at debian-ports.org
-Subject: Log for successful build of tabix_0.2.4-1 on kfreebsd-amd64 (dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+ CN=fano.debian.org, EMAIL=hostmaster at fano.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
+ id 1QJkwN-00077S-4A; Tue, 10 May 2011 11:17:23 +0000
+Received: from buildd by fano.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at fano.debian.org>)
+ id 1QJkwK-000EUP-6U; Tue, 10 May 2011 11:17:20 +0000
+Message-Id: <E1QJkwK-000EUP-6U at fano.debian.org>
+MIME-Version: 1.0
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Tue, 10 May 2011 11:17:20 +0000
+From: buildd on fano <buildd at fano.debian.org>
+To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on kfreebsd-amd64 (dist=sid)
+Key-Id: 91116966
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fasch.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fano.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (kfreebsd-amd64) 12 Apr 2011 09:50 ║
+║ tabix 0.2.5-1 (kfreebsd-amd64) 10 May 2011 11:16 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: kfreebsd-amd64
-Hit http://ftp.gr.debian.org sid InRelease
-Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
+Hit http://mirror-ubc.debian.org sid InRelease
+Hit http://mirror-ubc.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Ign http://ftp.gr.debian.org sid/contrib TranslationIndex
-Hit http://ftp.gr.debian.org sid/main TranslationIndex
-Ign http://ftp.gr.debian.org sid/non-free TranslationIndex
+Hit http://mirror-ubc.debian.org sid/contrib Sources/DiffIndex
+Hit http://mirror-ubc.debian.org sid/non-free Sources/DiffIndex
+Hit http://mirror-ubc.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
+Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
+Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
+Ign http://mirror-ubc.debian.org sid/contrib TranslationIndex
+Hit http://mirror-ubc.debian.org sid/main TranslationIndex
+Ign http://mirror-ubc.debian.org sid/non-free TranslationIndex
Get:1 http://incoming.debian.org Release.gpg [836 B]
-Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages
-Ign http://ftp.gr.debian.org sid/contrib Translation-en
-Ign http://ftp.gr.debian.org sid/non-free Translation-en
+Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages
+Ign http://mirror-ubc.debian.org sid/contrib Translation-en
+Ign http://mirror-ubc.debian.org sid/non-free Translation-en
+Get:2 http://incoming.debian.org Release [1604 B]
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
@@ -61,14 +64,13 @@ Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
Ign http://incoming.debian.org sid/non-free TranslationIndex
-Get:2 http://incoming.debian.org Release [1604 B]
+Get:3 http://incoming.debian.org Sources [27.9 kB]
+Get:4 http://incoming.debian.org Packages [545 kB]
Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages
-Get:3 http://incoming.debian.org Sources [48.9 kB]
-Get:4 http://incoming.debian.org Packages [773 kB]
+Ign http://incoming.debian.org Translation-en
Ign http://incoming.debian.org sid/contrib Translation-en
Ign http://incoming.debian.org sid/non-free Translation-en
-Ign http://incoming.debian.org Translation-en
-Fetched 825 kB in 5s (159 kB/s)
+Fetched 575 kB in 4s (119 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -89,11 +91,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 1s (52.8 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (95.1 kB/s)
Download complete and in download only mode
Check arch
@@ -113,18 +115,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libpipeline1 libpcre3 groff-base libssl0.9.8 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 7 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libpipeline1 libpcre3 groff-base libssl0.9.8 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 7 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -140,72 +136,79 @@ coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.1)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1)
freebsd-utils: already installed (8.1-4+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
+ncurses-base: already installed (5.9-1)
ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.10.1-19)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.1 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- file gettext gettext-base html2text intltool-debian libcroco3 libglib2.0-0
- libmagic1 libunistring0 libxml2 po-debconf
+ file gettext gettext-base groff-base html2text intltool-debian libcroco3
+ libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db
+ po-debconf
Suggested packages:
- devscripts doc-base dh-make gettext-doc libmail-box-perl
+ devscripts dh-make gettext-doc groff less www-browser libmail-box-perl
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl
The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base html2text intltool-debian libcroco3
- libglib2.0-0 libmagic1 libunistring0 libxml2 po-debconf zlib1g-dev
+ cdbs debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
+ libunistring0 libxml2 man-db po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 14 newly installed, 0 to remove and 7 not upgraded.
-Need to get 0 B/7956 kB of archives.
-After this operation, 21.3 MB of additional disk space will be used.
+0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/9211 kB of archives.
+After this operation, 25.8 MB of additional disk space will be used.
+Selecting previously deselected package groff-base.
+(Reading database ... 12270 files and directories currently installed.)
+Unpacking groff-base (from .../groff-base_1.21-5_kfreebsd-amd64.deb) ...
+Selecting previously deselected package libpipeline1.
+Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_kfreebsd-amd64.deb) ...
+Selecting previously deselected package man-db.
+Unpacking man-db (from .../man-db_2.6.0.2-1_kfreebsd-amd64.deb) ...
Selecting previously deselected package libmagic1.
-(Reading database ... 13818 files and directories currently installed.)
-Unpacking libmagic1 (from .../libmagic1_5.04-5_kfreebsd-amd64.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_kfreebsd-amd64.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5_kfreebsd-amd64.deb) ...
+Unpacking file (from .../file_5.04-5+b1_kfreebsd-amd64.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_kfreebsd-amd64.deb) ...
+Selecting previously deselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_8.12-3_kfreebsd-amd64.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_kfreebsd-amd64.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_kfreebsd-amd64.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-amd64.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_kfreebsd-amd64.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_kfreebsd-amd64.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_kfreebsd-amd64.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_kfreebsd-amd64.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_kfreebsd-amd64.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_kfreebsd-amd64.deb) ...
Selecting previously deselected package intltool-debian.
@@ -213,39 +216,40 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously deselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_kfreebsd-amd64.deb) ...
-Processing triggers for man-db ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up groff-base (1.21-5) ...
+Setting up libpipeline1 (1.2.0-1) ...
+Setting up man-db (2.6.0.2-1) ...
+Building database of manual pages ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libpcre3 (8.12-3) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 7 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
Kernel: GNU/kFreeBSD 8.1-1-amd64 kfreebsd-amd64 (x86_64)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.5_4.5.2-8 gcc-4.5_4.5.2-8 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.11.2-13 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8
-Package versions: apt_0.8.13.2 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.5.2-5 cpp-4.5_4.5.2-8 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.1 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1 freebsd-utils_8.1-4+b1 g++_4:4.5.2-5 g++-4.5_4.5.2-8 gcc_4:4.5.2-5 gcc-4.4-base_4.4.5-15 gcc-4.5_4.5.2-8 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc0.1_2.11.2-13 libc0.1-dev_2.11.2-13 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libedit2_2.11-20080614-2 libelfg0_0.8.13-1 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-2 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpc2_0.9-2 libmpfr4_3.0.0-9 libncurses5_5.9-1 libncursesw5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.3-3 libss2_1.41.12-2 libssl0.9.8_0.9.8o-7 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 libtasn1-3_2.9-2 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.5.9-4 mawk_1.3.3-15 ncurses-base_5.8+20110307-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 type-handling_0.2.23 tzdata_2011e-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 vim_2:7.3.035+hg~8fdc12103333-1 vim-common_2:7.3.035+hg~8fdc12103333-1 vim-runtime_2:7.3.035+hg~8fdc12103333-1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1 freebsd-utils_8.1-4+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc0.1_2.13-2 libc0.1-dev_2.13-2 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libedit2_2.11-20080614-2 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-7 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 type-handling_0.2.23 tzdata_2011g-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -256,12 +260,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -276,39 +280,41 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-amd64
fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -335,6 +341,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -353,58 +360,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.1 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_kfreebsd-amd64.deb'.
- dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org> >../tabix_0.2.4-1_kfreebsd-amd64.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_kfreebsd-amd64.deb'.
+ dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org> >../tabix_0.2.5-1_kfreebsd-amd64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0952
+Build finished at 20110510-1117
-tabix_0.2.4-1_kfreebsd-amd64.changes:
+tabix_0.2.5-1_kfreebsd-amd64.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: kfreebsd-amd64
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org>
+Maintainer: kfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 0cce910dd31ecc7d328759a1645db92b312772a8 56982 tabix_0.2.4-1_kfreebsd-amd64.deb
+ ed6acb903f82482a3836f2bb24c23c85e23b1d6b 58136 tabix_0.2.5-1_kfreebsd-amd64.deb
Checksums-Sha256:
- 8219113674d3e14cfb5e0a56004962ff004df4dde4d8768103c0cf7a704e87e1 56982 tabix_0.2.4-1_kfreebsd-amd64.deb
+ 866b51cc8b257ef7fa2df23b1e3c052f1bc499caa5e90b75481e10eafc4a32d7 58136 tabix_0.2.5-1_kfreebsd-amd64.deb
Files:
- 4250e22d0be1c66eb14f928b4485d958 56982 science optional tabix_0.2.4-1_kfreebsd-amd64.deb
+ 7bf68fdc4354fc2c7b0fad4c76bd58b8 58136 science optional tabix_0.2.5-1_kfreebsd-amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_kfreebsd-amd64.deb
+tabix_0.2.5-1_kfreebsd-amd64.deb
────────────────────────────────
new debian package, version 2.0.
- size 56982 bytes: control archive= 966 bytes.
+ size 58136 bytes: control archive= 1003 bytes.
796 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: kfreebsd-amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 126
+ Installed-Size: 132
Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -417,25 +423,26 @@ tabix_0.2.4-1_kfreebsd-amd64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:52 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/bin/
--rwxr-xr-x root/root 63072 2011-04-12 09:52 ./usr/bin/tabix
--rwxr-xr-x root/root 25928 2011-04-12 09:52 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-04-12 09:52 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 65440 2011-05-10 11:17 ./usr/bin/tabix
+-rwxr-xr-x root/root 25784 2011-05-10 11:17 ./usr/bin/bgzip
+lrwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -449,27 +456,21 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ka-sbuild-1302601849-48083/build/buildd-tabix_0.2.4-1-kfreebsd-amd64-IfQi2a
+Purging /var/lib/schroot/mount/sid-ka-sbuild-1305026168-54528/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 7 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libpipeline1 libpcre3 groff-base libssl0.9.8 man-db
-Use 'apt-get autoremove' to remove them.
The following packages will be REMOVED:
- cdbs* debhelper* file* gettext* gettext-base* html2text* intltool-debian*
- libcroco3* libglib2.0-0* libmagic1* libunistring0* libxml2* po-debconf*
- zlib1g-dev*
-0 upgraded, 0 newly installed, 14 to remove and 7 not upgraded.
-After this operation, 21.3 MB disk space will be freed.
-(Reading database ... 14694 files and directories currently installed.)
+ cdbs* debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3* libpipeline1*
+ libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 18 to remove and 0 not upgraded.
+After this operation, 25.8 MB disk space will be freed.
+(Reading database ... 13550 files and directories currently installed.)
Removing cdbs ...
Removing debhelper ...
Removing file ...
@@ -477,6 +478,10 @@ Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing groff-base ...
+Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
Removing libcroco3 ...
@@ -485,31 +490,33 @@ Removing libglib2.0-0 ...
Purging configuration files for libglib2.0-0 ...
Removing libmagic1 ...
Purging configuration files for libmagic1 ...
+Removing libpcre3 ...
+Purging configuration files for libpcre3 ...
+Removing libpipeline1 ...
+Purging configuration files for libpipeline1 ...
Removing libunistring0 ...
Purging configuration files for libunistring0 ...
Removing libxml2 ...
Purging configuration files for libxml2 ...
Removing zlib1g-dev ...
-Processing triggers for man-db ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-amd64
-Build-Space: 1534
+Build-Space: 1622
Build-Time: 15
Distribution: sid
-Install-Time: 57
-Job: tabix_0.2.4-1
+Install-Time: 31
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 91
-Source-Version: 0.2.4-1
-Space: 1534
+Package-Time: 58
+Source-Version: 0.2.5-1
+Space: 1622
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0952
-Build needed 00:01:31, 1534k disc space
-Signature with key '516A3A7B' requested:
-
+Finished at 20110510-1117
+Build needed 00:00:58, 1622k disc space
+Signature with key '91116966' requested:
diff --git a/kfreebsd-i386.log b/kfreebsd-i386.log
index 6259470..fdfcfaa 100644
--- a/kfreebsd-i386.log
+++ b/kfreebsd-i386.log
@@ -1,56 +1,58 @@
-From buildd at finzi.debian.org Tue Apr 12 09:48:25 2011
-Return-path: <buildd at finzi.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at field.debian.org Tue May 10 11:16:57 2011
+Return-path: <buildd at field.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at finzi.debian.org>)
- id 1Q9aCu-0003Xt-VY
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:48:25 +0000
-Received: from finzi.debian.org ([206.12.19.111])
+ (Exim 4.72) (envelope-from <buildd at field.debian.org>)
+ id 1QJkvx-0006Ik-Jq
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:16:57 +0000
+Received: from field.debian.org ([194.177.211.210])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=finzi.debian.org, EMAIL=hostmaster at finzi.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1Q9aCn-0002zJ-Ok; Tue, 12 Apr 2011 09:48:18 +0000
-Received: from buildd by finzi.debian.org with local (Exim 4.72)
- (envelope-from <buildd at finzi.debian.org>)
- id 1Q9aCl-000KcS-5M; Tue, 12 Apr 2011 09:48:15 +0000
-Date: Tue, 12 Apr 2011 09:48:15 +0000
-Message-Id: <E1Q9aCl-000KcS-5M at finzi.debian.org>
-From: buildd on finzi <buildd at finzi.debian.org>
-To: logs at buildd.debian.org,aurelien at aurel32.net,kibi at debian-ports.org
-Subject: Log for successful build of tabix_0.2.4-1 on kfreebsd-i386 (dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+ CN=field.debian.org, EMAIL=hostmaster at field.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.69) (envelope-from <buildd at field.debian.org>)
+ id 1QJkvz-0003ce-Js; Tue, 10 May 2011 11:16:59 +0000
+Received: from buildd by field.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at field.debian.org>)
+ id 1QJkvv-0003GH-ET; Tue, 10 May 2011 11:16:55 +0000
+Message-Id: <E1QJkvv-0003GH-ET at field.debian.org>
+MIME-Version: 1.0
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Tue, 10 May 2011 11:16:55 +0000
+From: buildd on field <buildd at field.debian.org>
+To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on kfreebsd-i386 (dist=sid)
+Key-Id: 22C61858
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on finzi.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on field.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (kfreebsd-i386) 12 Apr 2011 09:47 ║
+║ tabix 0.2.5-1 (kfreebsd-i386) 10 May 2011 11:14 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: kfreebsd-i386
-Hit http://mirror-ubc.debian.org sid InRelease
-Hit http://mirror-ubc.debian.org sid/main Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid InRelease
+Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://mirror-ubc.debian.org sid/contrib Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
-Ign http://mirror-ubc.debian.org sid/contrib TranslationIndex
-Hit http://mirror-ubc.debian.org sid/main TranslationIndex
-Ign http://mirror-ubc.debian.org sid/non-free TranslationIndex
-Ign http://mirror-ubc.debian.org sid/contrib Translation-en
-Ign http://mirror-ubc.debian.org sid/non-free Translation-en
-Hit http://incoming.debian.org Release.gpg
+Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
+Ign http://ftp.gr.debian.org sid/contrib TranslationIndex
+Hit http://ftp.gr.debian.org sid/main TranslationIndex
+Ign http://ftp.gr.debian.org sid/non-free TranslationIndex
+Get:1 http://incoming.debian.org Release.gpg [836 B]
+Ign http://ftp.gr.debian.org sid/contrib Translation-en
+Ign http://ftp.gr.debian.org sid/non-free Translation-en
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
@@ -60,12 +62,13 @@ Hit http://incoming.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
Ign http://incoming.debian.org sid/non-free TranslationIndex
-Hit http://incoming.debian.org Release
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:2 http://incoming.debian.org Release [1604 B]
+Get:3 http://incoming.debian.org Sources [27.9 kB]
+Get:4 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org sid/contrib Translation-en
Ign http://incoming.debian.org sid/non-free Translation-en
Ign http://incoming.debian.org Translation-en
+Fetched 575 kB in 6s (94.1 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +89,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (81.0 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (60.2 kB/s)
Download complete and in download only mode
Check arch
@@ -110,18 +113,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -137,83 +134,79 @@ coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.1)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1)
freebsd-utils: already installed (8.1-4)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
+ncurses-base: already installed (5.9-1)
ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.10.1-19)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.5.2-5 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.1 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
file gettext gettext-base groff-base html2text intltool-debian libcroco3
libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db
po-debconf
Suggested packages:
- devscripts doc-base dh-make gettext-doc groff less www-browser
- libmail-box-perl
+ devscripts dh-make gettext-doc groff less www-browser libmail-box-perl
Recommended packages:
- curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
- libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 18 newly installed, 0 to remove and 2 not upgraded.
-Need to get 0 B/9966 kB of archives.
-After this operation, 26.0 MB of additional disk space will be used.
+0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/8780 kB of archives.
+After this operation, 24.6 MB of additional disk space will be used.
Selecting previously deselected package groff-base.
-(Reading database ... 13430 files and directories currently installed.)
+(Reading database ... 12213 files and directories currently installed.)
Unpacking groff-base (from .../groff-base_1.21-5_kfreebsd-i386.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_kfreebsd-i386.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_kfreebsd-i386.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_kfreebsd-i386.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_kfreebsd-i386.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_kfreebsd-i386.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5_kfreebsd-i386.deb) ...
+Unpacking file (from .../file_5.04-5+b1_kfreebsd-i386.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_kfreebsd-i386.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_kfreebsd-i386.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_kfreebsd-i386.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_kfreebsd-i386.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-i386.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_kfreebsd-i386.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_kfreebsd-i386.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_kfreebsd-i386.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_kfreebsd-i386.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_kfreebsd-i386.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_kfreebsd-i386.deb) ...
Selecting previously deselected package intltool-debian.
@@ -221,43 +214,40 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously deselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_kfreebsd-i386.deb) ...
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
-Kernel: GNU/kFreeBSD 8.1-1-686 kfreebsd-i386 (i686)
-Toolchain package versions: binutils_2.21.0.20110327-3 dpkg-dev_1.16.0.1 g++-4.5_4.5.2-8 gcc-4.5_4.5.2-8 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.11.2-13 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8
-Package versions: apt_0.8.13.2 autotools-dev_20100122.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.5.2-5 cpp-4.5_4.5.2-8 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.1 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1 freebsd-utils_8.1-4 g++_4:4.5.2-5 g++-4.5_4.5.2-8 gcc_4:4.5.2-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.5-15 gcc-4.5_4.5.2-8 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc0.1_2.11.2-13 libc0.1-dev_2.11.2-13 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libedit2_2.11-20080614-2 libelfg0_0.8.13-1 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-2 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpc2_0.9-2 libmpfr4_3.0.0-9 libncurses5_5.9-1 libncursesw5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.3-3 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 libtasn1-3_2.9-2 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.6.0.1-1 mawk_1.3.3-15 ncurses-base_5.8+20110307-1 ncurses-bin_5.9-1 netbase_4.45 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 type-handling_0.2.23 tzdata_2011e-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 vim-runtime_2:7.3.154+hg~74503f6ee649-2 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: GNU/kFreeBSD 8.1-1-686-smp kfreebsd-i386 (i686)
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1 freebsd-utils_8.1-4 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc0.1_2.13-2 libc0.1-dev_2.13-2 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libedit2_2.11-20080614-2 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-7 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 ncurses-base_5.9-1 ncurses-bin_5.9-1 netbase_4.45 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 type-handling_0.2.23 tzdata_2011g-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -268,12 +258,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -288,39 +278,41 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-i386
fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -347,6 +339,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -365,58 +358,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.1 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_kfreebsd-i386.deb'.
- dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../tabix_0.2.4-1_kfreebsd-i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_kfreebsd-i386.deb'.
+ dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org> >../tabix_0.2.5-1_kfreebsd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0948
+Build finished at 20110510-1116
-tabix_0.2.4-1_kfreebsd-i386.changes:
+tabix_0.2.5-1_kfreebsd-i386.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: kfreebsd-i386
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org>
+Maintainer: kfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- a4c17c579e5dddee3f8d00ab54739ab19bc43e86 54108 tabix_0.2.4-1_kfreebsd-i386.deb
+ 231dfe225f2d7dafa1b2a0d4071052c89914fc8c 59940 tabix_0.2.5-1_kfreebsd-i386.deb
Checksums-Sha256:
- 250845a7f0efc41505fdac694d454ca43a97913d69a74bcd9cd354744ec48263 54108 tabix_0.2.4-1_kfreebsd-i386.deb
+ fe509f91840fcd637679206ceea2857af99f4f04a3a02a4e7ef2ae9c1d51ee7d 59940 tabix_0.2.5-1_kfreebsd-i386.deb
Files:
- 5ba3a05ebb79859da470dc62577a637c 54108 science optional tabix_0.2.4-1_kfreebsd-i386.deb
+ 212a37c3e9f31354cfa2e35de19c88d5 59940 science optional tabix_0.2.5-1_kfreebsd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_kfreebsd-i386.deb
+tabix_0.2.5-1_kfreebsd-i386.deb
───────────────────────────────
new debian package, version 2.0.
- size 54108 bytes: control archive= 967 bytes.
+ size 59940 bytes: control archive= 1001 bytes.
795 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: kfreebsd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 118
+ Installed-Size: 134
Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -429,25 +421,26 @@ tabix_0.2.4-1_kfreebsd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:47 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/bin/
--rwxr-xr-x root/root 57524 2011-04-12 09:47 ./usr/bin/tabix
--rwxr-xr-x root/root 22276 2011-04-12 09:47 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-04-12 09:47 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:16 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/bin/
+-rwxr-xr-x root/root 68156 2011-05-10 11:16 ./usr/bin/tabix
+-rwxr-xr-x root/root 24104 2011-05-10 11:16 ./usr/bin/bgzip
+lrwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -461,27 +454,21 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ki-sbuild-1302601625-78075/build/buildd-tabix_0.2.4-1-kfreebsd-i386-mhqQSs
+Purging /var/lib/schroot/mount/sid-ki-sbuild-1305026071-10843/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- vim-runtime
-Use 'apt-get autoremove' to remove them.
The following packages will be REMOVED:
cdbs* debhelper* file* gettext* gettext-base* groff-base* html2text*
intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3* libpipeline1*
libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 18 to remove and 2 not upgraded.
-After this operation, 26.0 MB disk space will be freed.
-(Reading database ... 14711 files and directories currently installed.)
+0 upgraded, 0 newly installed, 18 to remove and 0 not upgraded.
+After this operation, 24.6 MB disk space will be freed.
+(Reading database ... 13493 files and directories currently installed.)
Removing cdbs ...
Removing debhelper ...
Removing file ...
@@ -516,19 +503,18 @@ Removing zlib1g-dev ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-i386
-Build-Space: 1178
+Build-Space: 1292
Build-Time: 15
Distribution: sid
-Install-Time: 31
-Job: tabix_0.2.4-1
+Install-Time: 73
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 57
-Source-Version: 0.2.4-1
-Space: 1178
+Package-Time: 108
+Source-Version: 0.2.5-1
+Space: 1292
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0948
-Build needed 00:00:57, 1178k disc space
-Signature with key 'BB0A10AB' requested:
-
+Finished at 20110510-1116
+Build needed 00:01:48, 1292k disc space
+Signature with key '22C61858' requested:
diff --git a/mips.log b/mips.log
index 50ff15b..60f7df8 100644
--- a/mips.log
+++ b/mips.log
@@ -1,68 +1,67 @@
-From buildd at lucatelli.debian.org Tue Apr 12 11:23:24 2011
-Return-path: <buildd at lucatelli.debian.org>
+From buildd at ball.debian.org Tue May 10 11:18:19 2011
+Return-path: <buildd at ball.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at lucatelli.debian.org>)
- id 1Q9bgp-0004ZL-QA
- for logs at buildd.debian.org; Tue, 12 Apr 2011 11:23:24 +0000
-Received: from lucatelli.debian.org ([2607:f8f0:610:4000:2e0:98ff:fe00:4141])
+ (Exim 4.72) (envelope-from <buildd at ball.debian.org>)
+ id 1QJkxH-0006W8-A8
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:19 +0000
+Received: from ball.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d09])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=lucatelli.debian.org,
- EMAIL=hostmaster at lucatelli.debian.org (verified)
+ CN=ball.debian.org, EMAIL=hostmaster at ball.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at lucatelli.debian.org>)
- id 1Q9bgi-0005un-MQ
- for logs at buildd.debian.org; Tue, 12 Apr 2011 11:23:17 +0000
-Received: from buildd by lucatelli.debian.org with local (Exim 4.69)
- (envelope-from <buildd at lucatelli.debian.org>) id 1Q9bgb-0003Ec-JQ
- for logs at buildd.debian.org; Tue, 12 Apr 2011 11:23:09 +0000
-From: buildd on lucatelli <buildd at lucatelli.debian.org>
-To: logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on mips (dist=sid)
+ (Exim 4.72) (envelope-from <buildd at ball.debian.org>)
+ id 1QJkxG-00077s-6x
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:18 +0000
+Received: from buildd by ball.debian.org with local (Exim 4.69)
+ (envelope-from <buildd at ball.debian.org>)
+ id 1QJkxF-0005YD-Cg; Tue, 10 May 2011 11:18:17 +0000
+From: buildd on ball <buildd at ball.debian.org>
+To: logs at buildd.debian.org,buildd-porters at ball.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on mips (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1Q9bgb-0003Ec-JQ at lucatelli.debian.org>
-Date: Tue, 12 Apr 2011 11:23:09 +0000
+Message-Id: <E1QJkxF-0005YD-Cg at ball.debian.org>
+Date: Tue, 10 May 2011 11:18:17 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on lucatelli.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ball.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (mips) 12 Apr 2011 11:18 ║
+║ tabix 0.2.5-1 (mips) 10 May 2011 11:13 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: mips
-Get:1 http://mirror-ubc.debian.org unstable InRelease [151 kB]
-Get:2 http://incoming.debian.org unstable InRelease [151 kB]
-Get:3 http://mirror-ubc.debian.org unstable/main Sources [5265 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:6 http://mirror-ubc.debian.org unstable/contrib Sources [48.2 kB]
-Get:7 http://mirror-ubc.debian.org unstable/non-free Sources [97.4 kB]
-Get:8 http://mirror-ubc.debian.org unstable/main mips Packages [6928 kB]
-Get:9 http://mirror-ubc.debian.org unstable/contrib mips Packages [52.7 kB]
-Ign http://mirror-ubc.debian.org unstable/contrib TranslationIndex
-Get:10 http://mirror-ubc.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://mirror-ubc.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main mips Packages [6928 kB]
-Get:14 http://incoming.debian.org unstable/contrib mips Packages [52.7 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [51.4 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.1 kB]
+Get:8 http://ftp.de.debian.org unstable/main mips Packages [7083 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib mips Packages [54.8 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2264 B]
+Ign http://ftp.de.debian.org unstable/contrib Translation-en
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main mips Packages [7083 kB]
+Get:14 http://incoming.debian.org unstable/contrib mips Packages [54.8 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [50.0 kB]
-Get:18 http://incoming.debian.org Packages [773 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 25.9 MB in 1min 2s (411 kB/s)
+Fetched 26.8 MB in 59s (454 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -83,11 +82,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (93.3 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (104 kB/s)
Download complete and in download only mode
Check arch
@@ -107,12 +106,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -128,31 +127,31 @@ coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.1)
+dpkg: already installed (1.16.0.2)
e2fsprogs: already installed (1.41.12-2)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
-ncurses-bin: already installed (5.8+20110307-1)
-perl-base: already installed (5.10.1-19)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-11)
-gcc: already installed (4:4.4.5-7 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-7 >= 4:4.4.3 is satisfied)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.1 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
@@ -164,8 +163,8 @@ The following extra packages will be installed:
libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make gettext-doc
- groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl
@@ -173,57 +172,57 @@ The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 3 not upgraded.
-Need to get 10.4 MB of archives.
-After this operation, 31.1 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils mips 8.2.2 [210 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main groff-base mips 1.21-5 [1203 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 mips 1.2.0-1 [35.7 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main man-db mips 2.6.0.1-1 [996 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 mips 5.04-5 [239 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main file mips 5.04-5 [49.7 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-3 [153 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 mips 8.12-3 [262 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-2 [837 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 mips 2.28.4-1 [1505 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 mips 0.6.2-1 [110 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-3 [415 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main gettext mips 0.18.1.1-3 [2037 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 8.1.3 [554 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.92 [1268 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.3.4.dfsg-3 [191 kB]
+0 upgraded, 19 newly installed, 0 to remove and 26 not upgraded.
+Need to get 9245 kB of archives.
+After this operation, 29.7 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 8.2.2 [210 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-5 [1203 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mips 1.2.0-1 [35.7 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.0.2-1 [1005 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.04-5+b1 [239 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main file mips 5.04-5+b1 [49.9 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-3 [153 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 8.12-3 [262 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-2+b1 [837 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.28.6-1 [1509 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.2-1 [110 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-4 [415 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-3 [2037 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.3.4.dfsg-3 [191 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 10.4 MB in 1s (5481 kB/s)
+Fetched 9245 kB in 1s (7081 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10115 files and directories currently installed.)
+(Reading database ... 11381 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mips.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_mips.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mips.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_mips.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_mips.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_mips.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mips.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_mips.deb) ...
+Unpacking file (from .../file_5.04-5+b1_mips.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mips.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_mips.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_mips.deb) ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mips.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mips.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_mips.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mips.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mips.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_mips.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mips.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_mips.deb) ...
Selecting previously deselected package intltool-debian.
@@ -231,9 +230,9 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously deselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mips.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -241,33 +240,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.35.4-dsa-octeon mips (mips64)
-Toolchain package versions: binutils_2.21.0.20110327-3 dpkg-dev_1.16.0.1 g++-4.4_4.4.5-15 gcc-4.4_4.4.5-15 libc6-dev_2.11.2-11 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 linux-libc-dev_2.6.38-3
-Package versions: apt_0.8.13.2 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-7 cpp-4.4_4.4.5-15 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.1 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.4.5-7 g++-4.4_4.4.5-15 gcc_4:4.4.5-7 gcc-4.4_4.4.5-15 gcc-4.4-base_4.4.5-15 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.3-3 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011e-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32.2-dsa-mips-swarm mips (mips64)
+Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -279,12 +278,12 @@ Unpack source
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -300,8 +299,8 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mips
fakeroot debian/rules clean
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -311,12 +310,12 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
dh_clean
debian/rules build
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -326,21 +325,23 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mips-BI6hFB/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -371,6 +372,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -389,58 +391,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_mips.deb'.
- dpkg-genchanges -B -mmips Build Daemon (lucatelli) <buildd_mips-lucatelli at buildd.debian.org> >../tabix_0.2.4-1_mips.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mips.deb'.
+ dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../tabix_0.2.5-1_mips.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-1123
+Build finished at 20110510-1118
-tabix_0.2.4-1_mips.changes:
+tabix_0.2.5-1_mips.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: mips
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: mips Build Daemon (lucatelli) <buildd_mips-lucatelli at buildd.debian.org>
+Maintainer: Debian Build Daemon <buildd_mips-ball at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 75ce721600be4e19c29594cc98b9403739032e12 60168 tabix_0.2.4-1_mips.deb
+ 78f21916fd7710f2235bfd39fcfcc81e674f6cc3 56214 tabix_0.2.5-1_mips.deb
Checksums-Sha256:
- bbc574b20e2fd2851a1f5da14296965ca2ac842a8793b15eff469ff11c63f430 60168 tabix_0.2.4-1_mips.deb
+ 09a836ba92aceb7309faa516563ae681851756e82cdbf9285f17bd629617903d 56214 tabix_0.2.5-1_mips.deb
Files:
- 62db6b59400a39b4edc835c4c23ae306 60168 science optional tabix_0.2.4-1_mips.deb
+ 3d6707d56e3b8230d5ce62bc3f6cb1c9 56214 science optional tabix_0.2.5-1_mips.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_mips.deb
+tabix_0.2.5-1_mips.deb
──────────────────────
new debian package, version 2.0.
- size 60168 bytes: control archive= 958 bytes.
+ size 56214 bytes: control archive= 993 bytes.
784 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: mips
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 184
+ Installed-Size: 176
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -453,25 +454,26 @@ tabix_0.2.4-1_mips.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/bin/
--rwxr-xr-x root/root 28876 2011-04-12 11:22 ./usr/bin/bgzip
--rwxr-xr-x root/root 78552 2011-04-12 11:22 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/doc/tabix/
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 11:22 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 11:22 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2011-04-12 11:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 25792 2011-05-10 11:17 ./usr/bin/bgzip
+-rwxr-xr-x root/root 73376 2011-05-10 11:17 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -485,7 +487,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mips-sbuild-a34d86f6-cf16-4994-ae2c-91dd5a6eb44c/build/buildd-tabix_0.2.4-1-mips-BI6hFB
+Purging /var/lib/schroot/mount/sid-mips-sbuild-29525b66-d96d-4648-a4c9-8ff907fbbca4/build/buildd-tabix_0.2.5-1-mips-y1nWwN
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -493,76 +495,86 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mips
-Build-Space: 1396
-Build-Time: 133
+Build-Space: 1480
+Build-Time: 78
Distribution: sid
-Install-Time: 63
-Job: tabix_0.2.4-1
+Install-Time: 85
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 300
-Source-Version: 0.2.4-1
-Space: 1396
+Package-Time: 291
+Source-Version: 0.2.5-1
+Space: 1480
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-1123
-Build needed 00:05:00, 1396k disc space
-Signature with key 'F4C69470' requested:
-
-From buildd at monteverdi.ayous.org Tue Apr 12 18:16:07 2011
-Return-path: <buildd at monteverdi.ayous.org>
-Received: from monteverdi.ayous.org ([2001:a60:f006:deb:20a:1ff:fe00:987])
- by grieg.debian.org with esmtp (Exim 4.69)
- (envelope-from <buildd at monteverdi.ayous.org>) id 1Q9i8E-0002gF-5a
- for logs at buildd.debian.org; Tue, 12 Apr 2011 18:16:07 +0000
-Received: from buildd by monteverdi.ayous.org with local (Exim 4.69)
- (envelope-from <buildd at monteverdi.ayous.org>)
- id 1Q9hzT-0003MO-J3; Tue, 12 Apr 2011 18:07:03 +0000
-From: buildd on monteverdi <buildd at monteverdi.ayous.org>
-To: aba+buildd_monteverdi at not.so.argh.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on mipsel (dist=sid)
+Finished at 20110510-1118
+Build needed 00:04:51, 1480k disc space
+Signature with key '40E097C5' requested:
+
+From buildd at rem.debian.org Tue May 10 11:18:52 2011
+Return-path: <buildd at rem.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1QJkxo-0006cE-2H
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:52 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1QJkxm-000785-QL
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:51 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at rem.debian.org>) id 1QJkxm-0008Qs-5X
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:50 +0000
+Date: Tue, 10 May 2011 11:18:50 +0000
+Message-Id: <E1QJkxm-0008Qs-5X at rem.debian.org>
+From: buildd on rem <buildd at rem.debian.org>
+To: logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1Q9hzT-0003MO-J3 at monteverdi.ayous.org>
-Date: Tue, 12 Apr 2011 18:07:03 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.60.5 (14 Nov 2010) on monteverdi.ayous.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (mipsel) 12 Apr 2011 18:03 ║
+║ tabix 0.2.5-1 (mipsel) 10 May 2011 11:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: mipsel
-Chroot Build Dir: /var/lib/schroot/mount/sid-mipsel-sbuild-52aa155f-4ecf-42fe-9e05-8c4b8446ae04/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD
-Start Time: 20110412-1803
-Get:1 http://incoming.debian.org unstable InRelease [151 kB]
-Get:2 http://mirror.ayous.org unstable InRelease [151 kB]
-Ign http://mirror.ayous.org unstable/contrib TranslationIndex
-Get:3 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
+Get:1 http://mirror.ayous.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://mirror.ayous.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:4 http://mirror.ayous.org unstable/main Sources [6613 kB]
-Get:5 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:6 http://incoming.debian.org Release.gpg [836 B]
-Get:7 http://incoming.debian.org unstable/main Sources [6613 kB]
-Get:8 http://mirror.ayous.org unstable/contrib Sources [57.0 kB]
-Get:9 http://mirror.ayous.org unstable/non-free Sources [116 kB]
-Get:10 http://mirror.ayous.org unstable/main mipsel Packages [9133 kB]
-Get:11 http://incoming.debian.org unstable/contrib Sources [57.0 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [116 kB]
-Get:13 http://incoming.debian.org unstable/main mipsel Packages [9133 kB]
-Get:14 http://mirror.ayous.org unstable/contrib mipsel Packages [63.6 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:6 http://mirror.ayous.org unstable/contrib Sources [51.4 kB]
+Get:7 http://mirror.ayous.org unstable/non-free Sources [97.1 kB]
+Get:8 http://mirror.ayous.org unstable/main mipsel Packages [7094 kB]
+Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [54.8 kB]
+Ign http://mirror.ayous.org unstable/contrib TranslationIndex
+Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
Ign http://mirror.ayous.org unstable/contrib Translation-en
-Get:15 http://incoming.debian.org unstable/contrib mipsel Packages [63.6 kB]
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main mipsel Packages [7094 kB]
+Get:14 http://incoming.debian.org unstable/contrib mipsel Packages [54.8 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [51.8 kB]
-Get:18 http://incoming.debian.org Packages [1050 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 33.4 MB in 48s (689 kB/s)
+Fetched 26.8 MB in 47s (560 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -583,116 +595,157 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (115 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (102 kB/s)
Download complete and in download only mode
Check arch
──────────
-** Using build dependencies supplied by package:
-Build-Depends: cdbs, debhelper (>= 8), zlib1g-dev
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install build dependencies (internal resolver) │
+│ Install core build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Checking for already installed source dependencies...
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5)
+fakeroot: already installed (1.15.1-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Checking for already installed dependencies...
+base-files: already installed (6.3)
+base-passwd: already installed (3.5.22)
+bash: already installed (4.1-3)
+coreutils: already installed (8.5-1)
+dash: already installed (0.5.5.1-7.4)
+debianutils: already installed (3.4.4)
+diffutils: already installed (1:3.0-1)
+dpkg: already installed (1.16.0.2)
+e2fsprogs: already installed (1.41.12-2)
+findutils: already installed (4.4.2-1+b1)
+grep: already installed (2.6.3-3)
+gzip: already installed (1.3.12-9)
+hostname: already installed (3.06)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
+sed: already installed (4.2.1-9)
+login: already installed (1:4.1.4.2+svn3283-3)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
+tar: already installed (1.25-3)
+bsdutils: already installed (1:2.17.2-9.1)
+mount: already installed (2.17.2-9.1)
+util-linux: already installed (2.17.2-9.1)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
-Checking for source dependency conflicts...
+Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpkg-dev file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libdpkg-perl libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make debian-keyring
- gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
- autotools-dev libalgorithm-merge-perl curl wget lynx-cur autopoint
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-The following packages will be upgraded:
- dpkg-dev libdpkg-perl
-2 upgraded, 19 newly installed, 0 to remove and 31 not upgraded.
-Need to get 12.0 MB of archives.
-After this operation, 31.2 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 17 not upgraded.
+Need to get 9167 kB of archives.
+After this operation, 29.7 MB of additional disk space will be used.
Get:1 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 8.2.2 [207 kB]
Get:2 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-5 [1154 kB]
Get:3 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.0-1 [35.1 kB]
-Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.1-1 [995 kB]
-Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5 [238 kB]
-Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5 [49.5 kB]
+Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.2-1 [1008 kB]
+Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5+b1 [238 kB]
+Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5+b1 [49.9 kB]
Get:7 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-3 [152 kB]
Get:8 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 8.12-3 [262 kB]
-Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2 [833 kB]
-Get:10 http://mirror.ayous.org/debian/ unstable/main dpkg-dev mipsel 1.16.0.1 [871 kB]
-Get:11 http://mirror.ayous.org/debian/ unstable/main libdpkg-perl mipsel 1.16.0.1 [748 kB]
-Get:12 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:13 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.4-1 [1499 kB]
-Get:14 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
-Get:15 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-3 [411 kB]
-Get:16 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
-Get:17 http://mirror.ayous.org/debian/ unstable/main intltool-debian mipsel 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://mirror.ayous.org/debian/ unstable/main po-debconf mipsel 1.0.16+nmu1 [223 kB]
-Get:19 http://mirror.ayous.org/debian/ unstable/main debhelper mipsel 8.1.3 [554 kB]
-Get:20 http://mirror.ayous.org/debian/ unstable/main cdbs mipsel 0.4.92 [1268 kB]
-Get:21 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
+Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2+b1 [832 kB]
+Get:10 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:11 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.6-1 [1503 kB]
+Get:12 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
+Get:13 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-4 [411 kB]
+Get:14 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
+Get:15 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://mirror.ayous.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://mirror.ayous.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.0 MB in 2s (4895 kB/s)
+Fetched 9167 kB in 1s (8368 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10124 files and directories currently installed.)
+(Reading database ... 11389 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mipsel.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_mipsel.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mipsel.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_mipsel.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_mipsel.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_mipsel.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mipsel.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5_mipsel.deb) ...
+Unpacking file (from .../file_5.04-5+b1_mipsel.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mipsel.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_mipsel.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_mipsel.deb) ...
-Preparing to replace dpkg-dev 1.15.8.10 (using .../dpkg-dev_1.16.0.1_mipsel.deb) ...
-Unpacking replacement dpkg-dev ...
-Preparing to replace libdpkg-perl 1.15.8.10 (using .../libdpkg-perl_1.16.0.1_mipsel.deb) ...
-Unpacking replacement libdpkg-perl ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mipsel.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_mipsel.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mipsel.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mipsel.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_mipsel.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mipsel.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_mipsel.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_mipsel.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_mipsel.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_mipsel.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../cdbs_0.4.92_mipsel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mipsel.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -700,31 +753,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up libdpkg-perl (1.16.0.1) ...
-Setting up dpkg-dev (1.16.0.1) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
-Checking correctness of source dependencies...
-Kernel: Linux 2.6.33-rc7 mipsel (mips64)
-Toolchain package versions: libc6-dev_2.11.2-11 dpkg-dev_1.16.0.1 linux-libc-dev_2.6.37-2 gcc-4.4_4.4.5-13 g++-4.4_4.4.5-13 binutils_2.21.0.20110302-1 libstdc++6-4.4-dev_4.4.5-13 libstdc++6_4.5.2-4
-Package versions: apt_0.8.12 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110302-1 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-4 cpp-4.4_4.4.5-13 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.14.5-2 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.4.5-4 g++-4.4_4.4.5-13 gcc_4:4.4.5-4 gcc-4.4_4.4.5-13 gcc-4.4-base_4.4.5-13 gcc-4.5-base_4.5.2-4 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.5.2-4 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-6 libgmp3c2_2:4.3.2+dfsg-1 libgomp1_4.5.2-4 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr1ldbl_2.4.2-3 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.96-1 libsepol1_2.0.42-1 libslang2_2.2.2-4 libss2_1.41.12-2 libstdc++6_4.5.2-4 libstdc++6-4.4-dev_4.4.5-13 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.37-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-17 perl-base_5.10.1-17 perl-modules_5.10.1-17 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011c-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Checking correctness of dependencies...
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-2 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -734,14 +789,13 @@ Package versions: apt_0.8.12 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binuti
Unpack source
─────────────
-dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -756,42 +810,44 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
- /usr/bin/fakeroot debian/rules clean
+ fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
- /usr/bin/fakeroot debian/rules binary-arch
+ fakeroot debian/rules binary-arch
test -x debian/rules
dh_testroot
dh_prep
@@ -815,6 +871,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -833,58 +890,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (monteverdi) <buildd_mipsel-monteverdi at buildd.debian.org> >../tabix_0.2.4-1_mipsel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-1806
+Build finished at 20110510-1118
-tabix_0.2.4-1_mipsel.changes:
+tabix_0.2.5-1_mipsel.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (monteverdi) <buildd_mipsel-monteverdi at buildd.debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 1c95d4c5e4648c65d2e2040524a4dd3e3695a053 60584 tabix_0.2.4-1_mipsel.deb
+ cb9248273b05e891d21ccddb8437d851eea2b26f 56558 tabix_0.2.5-1_mipsel.deb
Checksums-Sha256:
- 8ab1a6c9f35869a690ef29a61c98a7fbab01b39f78387aaf761729ff4a1d625b 60584 tabix_0.2.4-1_mipsel.deb
+ 5172771332558c050cea038548f434974b41ce9b6d4cc5c9723c633cbefd6dec 56558 tabix_0.2.5-1_mipsel.deb
Files:
- 8ef42dec146f1a59539fb5fb3b270b15 60584 science optional tabix_0.2.4-1_mipsel.deb
+ 43de2dd42946ae7944ac51bdcf90ea44 56558 science optional tabix_0.2.5-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_mipsel.deb
+tabix_0.2.5-1_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 60584 bytes: control archive= 964 bytes.
+ size 56558 bytes: control archive= 997 bytes.
786 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 184
+ Installed-Size: 176
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -897,25 +953,26 @@ tabix_0.2.4-1_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/tabix/
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:18 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 18:06 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/bin/
--rwxr-xr-x root/root 28876 2011-04-12 18:06 ./usr/bin/bgzip
--rwxr-xr-x root/root 78504 2011-04-12 18:06 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-04-12 18:06 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/bin/
+-rwxr-xr-x root/root 25792 2011-05-10 11:18 ./usr/bin/bgzip
+-rwxr-xr-x root/root 73376 2011-05-10 11:18 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2011-05-10 11:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -924,9 +981,32 @@ lrwxrwxrwx root/root 0 2011-04-12 18:06 ./usr/share/man/man1/bgzip.1.gz
Built successfully
────────────────────────────────────────────────────────────────────────────────
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-52aa155f-4ecf-42fe-9e05-8c4b8446ae04/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD
-Not removing build depends: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-970195d3-7efe-46a8-830d-95b863b60c53/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1
+Not cleaning session: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: mipsel
+Build-Space: 1480
+Build-Time: 67
+Distribution: sid
+Install-Time: 55
+Job: tabix_0.2.5-1
+Package: tabix
+Package-Time: 200
+Source-Version: 0.2.5-1
+Space: 1480
+Status: successful
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-1806
-Build needed 00:03:40, 1396k disc space
+Finished at 20110510-1118
+Build needed 00:03:20, 1480k disc space
+Signature with key '21BDEC11' requested:
diff --git a/mipsel.log b/mipsel.log
index 10c6cfc..e4c3b40 100644
--- a/mipsel.log
+++ b/mipsel.log
@@ -1,57 +1,67 @@
-From buildd at monteverdi.ayous.org Tue Apr 12 18:16:07 2011
-Return-path: <buildd at monteverdi.ayous.org>
-Received: from monteverdi.ayous.org ([2001:a60:f006:deb:20a:1ff:fe00:987])
- by grieg.debian.org with esmtp (Exim 4.69)
- (envelope-from <buildd at monteverdi.ayous.org>) id 1Q9i8E-0002gF-5a
- for logs at buildd.debian.org; Tue, 12 Apr 2011 18:16:07 +0000
-Received: from buildd by monteverdi.ayous.org with local (Exim 4.69)
- (envelope-from <buildd at monteverdi.ayous.org>)
- id 1Q9hzT-0003MO-J3; Tue, 12 Apr 2011 18:07:03 +0000
-From: buildd on monteverdi <buildd at monteverdi.ayous.org>
-To: aba+buildd_monteverdi at not.so.argh.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on mipsel (dist=sid)
+From buildd at rem.debian.org Tue May 10 11:18:52 2011
+Return-path: <buildd at rem.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1QJkxo-0006cE-2H
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:52 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1QJkxm-000785-QL
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:51 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at rem.debian.org>) id 1QJkxm-0008Qs-5X
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:18:50 +0000
+Date: Tue, 10 May 2011 11:18:50 +0000
+Message-Id: <E1QJkxm-0008Qs-5X at rem.debian.org>
+From: buildd on rem <buildd at rem.debian.org>
+To: logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1Q9hzT-0003MO-J3 at monteverdi.ayous.org>
-Date: Tue, 12 Apr 2011 18:07:03 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.60.5 (14 Nov 2010) on monteverdi.ayous.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (mipsel) 12 Apr 2011 18:03 ║
+║ tabix 0.2.5-1 (mipsel) 10 May 2011 11:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: mipsel
-Chroot Build Dir: /var/lib/schroot/mount/sid-mipsel-sbuild-52aa155f-4ecf-42fe-9e05-8c4b8446ae04/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD
-Start Time: 20110412-1803
-Get:1 http://incoming.debian.org unstable InRelease [151 kB]
-Get:2 http://mirror.ayous.org unstable InRelease [151 kB]
-Ign http://mirror.ayous.org unstable/contrib TranslationIndex
-Get:3 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
+Get:1 http://mirror.ayous.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://mirror.ayous.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:4 http://mirror.ayous.org unstable/main Sources [6613 kB]
-Get:5 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:6 http://incoming.debian.org Release.gpg [836 B]
-Get:7 http://incoming.debian.org unstable/main Sources [6613 kB]
-Get:8 http://mirror.ayous.org unstable/contrib Sources [57.0 kB]
-Get:9 http://mirror.ayous.org unstable/non-free Sources [116 kB]
-Get:10 http://mirror.ayous.org unstable/main mipsel Packages [9133 kB]
-Get:11 http://incoming.debian.org unstable/contrib Sources [57.0 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [116 kB]
-Get:13 http://incoming.debian.org unstable/main mipsel Packages [9133 kB]
-Get:14 http://mirror.ayous.org unstable/contrib mipsel Packages [63.6 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:6 http://mirror.ayous.org unstable/contrib Sources [51.4 kB]
+Get:7 http://mirror.ayous.org unstable/non-free Sources [97.1 kB]
+Get:8 http://mirror.ayous.org unstable/main mipsel Packages [7094 kB]
+Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [54.8 kB]
+Ign http://mirror.ayous.org unstable/contrib TranslationIndex
+Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
Ign http://mirror.ayous.org unstable/contrib Translation-en
-Get:15 http://incoming.debian.org unstable/contrib mipsel Packages [63.6 kB]
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main mipsel Packages [7094 kB]
+Get:14 http://incoming.debian.org unstable/contrib mipsel Packages [54.8 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [51.8 kB]
-Get:18 http://incoming.debian.org Packages [1050 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 33.4 MB in 48s (689 kB/s)
+Fetched 26.8 MB in 47s (560 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -72,116 +82,157 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://mirror.ayous.org/debian/ unstable/main tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (115 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (102 kB/s)
Download complete and in download only mode
Check arch
──────────
-** Using build dependencies supplied by package:
-Build-Depends: cdbs, debhelper (>= 8), zlib1g-dev
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install build dependencies (internal resolver) │
+│ Install core build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Checking for already installed source dependencies...
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5)
+fakeroot: already installed (1.15.1-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Checking for already installed dependencies...
+base-files: already installed (6.3)
+base-passwd: already installed (3.5.22)
+bash: already installed (4.1-3)
+coreutils: already installed (8.5-1)
+dash: already installed (0.5.5.1-7.4)
+debianutils: already installed (3.4.4)
+diffutils: already installed (1:3.0-1)
+dpkg: already installed (1.16.0.2)
+e2fsprogs: already installed (1.41.12-2)
+findutils: already installed (4.4.2-1+b1)
+grep: already installed (2.6.3-3)
+gzip: already installed (1.3.12-9)
+hostname: already installed (3.06)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
+sed: already installed (4.2.1-9)
+login: already installed (1:4.1.4.2+svn3283-3)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
+tar: already installed (1.25-3)
+bsdutils: already installed (1:2.17.2-9.1)
+mount: already installed (2.17.2-9.1)
+util-linux: already installed (2.17.2-9.1)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
-Checking for source dependency conflicts...
+Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpkg-dev file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libdpkg-perl libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make debian-keyring
- gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
- autotools-dev libalgorithm-merge-perl curl wget lynx-cur autopoint
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-The following packages will be upgraded:
- dpkg-dev libdpkg-perl
-2 upgraded, 19 newly installed, 0 to remove and 31 not upgraded.
-Need to get 12.0 MB of archives.
-After this operation, 31.2 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 17 not upgraded.
+Need to get 9167 kB of archives.
+After this operation, 29.7 MB of additional disk space will be used.
Get:1 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 8.2.2 [207 kB]
Get:2 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-5 [1154 kB]
Get:3 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.0-1 [35.1 kB]
-Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.1-1 [995 kB]
-Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5 [238 kB]
-Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5 [49.5 kB]
+Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.2-1 [1008 kB]
+Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5+b1 [238 kB]
+Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5+b1 [49.9 kB]
Get:7 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-3 [152 kB]
Get:8 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 8.12-3 [262 kB]
-Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2 [833 kB]
-Get:10 http://mirror.ayous.org/debian/ unstable/main dpkg-dev mipsel 1.16.0.1 [871 kB]
-Get:11 http://mirror.ayous.org/debian/ unstable/main libdpkg-perl mipsel 1.16.0.1 [748 kB]
-Get:12 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:13 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.4-1 [1499 kB]
-Get:14 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
-Get:15 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-3 [411 kB]
-Get:16 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
-Get:17 http://mirror.ayous.org/debian/ unstable/main intltool-debian mipsel 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://mirror.ayous.org/debian/ unstable/main po-debconf mipsel 1.0.16+nmu1 [223 kB]
-Get:19 http://mirror.ayous.org/debian/ unstable/main debhelper mipsel 8.1.3 [554 kB]
-Get:20 http://mirror.ayous.org/debian/ unstable/main cdbs mipsel 0.4.92 [1268 kB]
-Get:21 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
+Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2+b1 [832 kB]
+Get:10 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:11 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.6-1 [1503 kB]
+Get:12 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
+Get:13 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-4 [411 kB]
+Get:14 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
+Get:15 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://mirror.ayous.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://mirror.ayous.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.0 MB in 2s (4895 kB/s)
+Fetched 9167 kB in 1s (8368 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10124 files and directories currently installed.)
+(Reading database ... 11389 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mipsel.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_mipsel.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mipsel.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_mipsel.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_mipsel.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_mipsel.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mipsel.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5_mipsel.deb) ...
+Unpacking file (from .../file_5.04-5+b1_mipsel.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mipsel.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_mipsel.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_mipsel.deb) ...
-Preparing to replace dpkg-dev 1.15.8.10 (using .../dpkg-dev_1.16.0.1_mipsel.deb) ...
-Unpacking replacement dpkg-dev ...
-Preparing to replace libdpkg-perl 1.15.8.10 (using .../libdpkg-perl_1.16.0.1_mipsel.deb) ...
-Unpacking replacement libdpkg-perl ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mipsel.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_mipsel.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mipsel.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mipsel.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_mipsel.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mipsel.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_mipsel.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_mipsel.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_mipsel.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_mipsel.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../cdbs_0.4.92_mipsel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mipsel.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -189,31 +240,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up libdpkg-perl (1.16.0.1) ...
-Setting up dpkg-dev (1.16.0.1) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
-Checking correctness of source dependencies...
-Kernel: Linux 2.6.33-rc7 mipsel (mips64)
-Toolchain package versions: libc6-dev_2.11.2-11 dpkg-dev_1.16.0.1 linux-libc-dev_2.6.37-2 gcc-4.4_4.4.5-13 g++-4.4_4.4.5-13 binutils_2.21.0.20110302-1 libstdc++6-4.4-dev_4.4.5-13 libstdc++6_4.5.2-4
-Package versions: apt_0.8.12 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110302-1 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-4 cpp-4.4_4.4.5-13 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.14.5-2 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.4.5-4 g++-4.4_4.4.5-13 gcc_4:4.4.5-4 gcc-4.4_4.4.5-13 gcc-4.4-base_4.4.5-13 gcc-4.5-base_4.5.2-4 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.5.2-4 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-6 libgmp3c2_2:4.3.2+dfsg-1 libgomp1_4.5.2-4 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr1ldbl_2.4.2-3 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.96-1 libsepol1_2.0.42-1 libslang2_2.2.2-4 libss2_1.41.12-2 libstdc++6_4.5.2-4 libstdc++6-4.4-dev_4.4.5-13 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.37-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-17 perl-base_5.10.1-17 perl-modules_5.10.1-17 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011c-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+Checking correctness of dependencies...
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-2 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -223,14 +276,13 @@ Package versions: apt_0.8.12 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binuti
Unpack source
─────────────
-dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -245,42 +297,44 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
- /usr/bin/fakeroot debian/rules clean
+ fakeroot debian/rules clean
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
- /usr/bin/fakeroot debian/rules binary-arch
+ fakeroot debian/rules binary-arch
test -x debian/rules
dh_testroot
dh_prep
@@ -304,6 +358,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -322,58 +377,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (monteverdi) <buildd_mipsel-monteverdi at buildd.debian.org> >../tabix_0.2.4-1_mipsel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-1806
+Build finished at 20110510-1118
-tabix_0.2.4-1_mipsel.changes:
+tabix_0.2.5-1_mipsel.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (monteverdi) <buildd_mipsel-monteverdi at buildd.debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 1c95d4c5e4648c65d2e2040524a4dd3e3695a053 60584 tabix_0.2.4-1_mipsel.deb
+ cb9248273b05e891d21ccddb8437d851eea2b26f 56558 tabix_0.2.5-1_mipsel.deb
Checksums-Sha256:
- 8ab1a6c9f35869a690ef29a61c98a7fbab01b39f78387aaf761729ff4a1d625b 60584 tabix_0.2.4-1_mipsel.deb
+ 5172771332558c050cea038548f434974b41ce9b6d4cc5c9723c633cbefd6dec 56558 tabix_0.2.5-1_mipsel.deb
Files:
- 8ef42dec146f1a59539fb5fb3b270b15 60584 science optional tabix_0.2.4-1_mipsel.deb
+ 43de2dd42946ae7944ac51bdcf90ea44 56558 science optional tabix_0.2.5-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_mipsel.deb
+tabix_0.2.5-1_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 60584 bytes: control archive= 964 bytes.
+ size 56558 bytes: control archive= 997 bytes.
786 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 184
+ Installed-Size: 176
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -386,25 +440,26 @@ tabix_0.2.4-1_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/tabix/
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:18 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 18:06 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 18:06 ./usr/bin/
--rwxr-xr-x root/root 28876 2011-04-12 18:06 ./usr/bin/bgzip
--rwxr-xr-x root/root 78504 2011-04-12 18:06 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-04-12 18:06 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/bin/
+-rwxr-xr-x root/root 25792 2011-05-10 11:18 ./usr/bin/bgzip
+-rwxr-xr-x root/root 73376 2011-05-10 11:18 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2011-05-10 11:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -413,9 +468,32 @@ lrwxrwxrwx root/root 0 2011-04-12 18:06 ./usr/share/man/man1/bgzip.1.gz
Built successfully
────────────────────────────────────────────────────────────────────────────────
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-52aa155f-4ecf-42fe-9e05-8c4b8446ae04/build/buildd-tabix_0.2.4-1-mipsel-M1XQcD
-Not removing build depends: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-970195d3-7efe-46a8-830d-95b863b60c53/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1
+Not cleaning session: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: mipsel
+Build-Space: 1480
+Build-Time: 67
+Distribution: sid
+Install-Time: 55
+Job: tabix_0.2.5-1
+Package: tabix
+Package-Time: 200
+Source-Version: 0.2.5-1
+Space: 1480
+Status: successful
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-1806
-Build needed 00:03:40, 1396k disc space
+Finished at 20110510-1118
+Build needed 00:03:20, 1480k disc space
+Signature with key '21BDEC11' requested:
diff --git a/powerpc.log b/powerpc.log
index 764ede1..cb1ef8f 100644
--- a/powerpc.log
+++ b/powerpc.log
@@ -1,69 +1,69 @@
-From buildd at porpora.debian.org Tue Apr 12 09:46:21 2011
-Return-path: <buildd at porpora.debian.org>
+From buildd at poulenc.debian.org Tue May 10 11:15:30 2011
+Return-path: <buildd at poulenc.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at porpora.debian.org>)
- id 1Q9aAv-0003AO-FX
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:46:21 +0000
-Received: from porpora.ynic.york.ac.uk ([144.32.168.78]
- helo=porpora.debian.org)
+ (Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
+ id 1QJkuY-00064h-1j
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:15:30 +0000
+Received: from poulenc.ynic.york.ac.uk ([144.32.168.77]
+ helo=poulenc.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=porpora.debian.org, EMAIL=hostmaster at porpora.debian.org (verified)
+ CN=poulenc.debian.org, EMAIL=hostmaster at poulenc.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at porpora.debian.org>)
- id 1Q9aAr-0001bq-6a; Tue, 12 Apr 2011 09:46:17 +0000
-Received: from buildd by porpora.debian.org with local (Exim 4.69)
- (envelope-from <buildd at porpora.debian.org>)
- id 1Q9aAo-0008NT-FI; Tue, 12 Apr 2011 09:46:14 +0000
+ (Exim 4.69) (envelope-from <buildd at poulenc.debian.org>)
+ id 1QJkua-0003Zb-2a; Tue, 10 May 2011 11:15:32 +0000
+Received: from buildd by poulenc.debian.org with local (Exim 4.69)
+ (envelope-from <buildd at poulenc.debian.org>)
+ id 1QJkuV-0005Dw-FM; Tue, 10 May 2011 11:15:27 +0000
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 12 Apr 2011 09:46:14 +0000
-From: buildd on porpora <buildd at porpora.debian.org>
+Date: Tue, 10 May 2011 11:15:27 +0000
+From: buildd on poulenc <buildd at poulenc.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on powerpc (dist=sid)
-Key-Id: CDFA0A89
-Message-Id: <E1Q9aAo-0008NT-FI at porpora.debian.org>
+Subject: Log for successful build of tabix_0.2.5-1 on powerpc (dist=sid)
+Key-Id: 205E9E83
+Message-Id: <E1QJkuV-0005Dw-FM at poulenc.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on porpora.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on poulenc.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (powerpc) 12 Apr 2011 09:43 ║
+║ tabix 0.2.5-1 (powerpc) 10 May 2011 11:13 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: powerpc
-Get:1 http://ftp.uk.debian.org unstable InRelease [151 kB]
-Get:2 http://ftp.uk.debian.org unstable/main Sources [5264 kB]
-Get:3 http://incoming.debian.org unstable InRelease [151 kB]
-Get:4 http://ftp.uk.debian.org unstable/contrib Sources [48.2 kB]
-Get:5 http://ftp.uk.debian.org unstable/non-free Sources [97.4 kB]
-Get:6 http://ftp.uk.debian.org unstable/main powerpc Packages [7060 kB]
+Get:1 http://ftp.uk.debian.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
-Get:7 http://incoming.debian.org Release.gpg [836 B]
-Get:8 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [52.4 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [51.4 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.1 kB]
+Get:8 http://ftp.uk.debian.org unstable/main powerpc Packages [7185 kB]
+Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [54.4 kB]
Ign http://ftp.uk.debian.org unstable/contrib TranslationIndex
Get:10 http://ftp.uk.debian.org unstable/main TranslationIndex [2264 B]
Ign http://ftp.uk.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main powerpc Packages [7058 kB]
-Get:14 http://incoming.debian.org unstable/contrib powerpc Packages [52.4 kB]
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main powerpc Packages [7185 kB]
+Get:14 http://incoming.debian.org unstable/contrib powerpc Packages [54.4 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [49.0 kB]
-Get:18 http://incoming.debian.org Packages [775 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 26.2 MB in 26s (994 kB/s)
+Fetched 27.0 MB in 26s (1016 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (88.8 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (86.4 kB/s)
Download complete and in download only mode
Check arch
@@ -108,18 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libppl7 libppl-c2
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libppl7 libppl-c2
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -128,130 +122,119 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.1)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.15.8.10)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8-1)
-ncurses-bin: already installed (5.8-1)
-perl-base: already installed (5.10.1-18)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-11)
-gcc: already installed (4:4.5.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.5.2-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.15.8.10 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libppl7 libppl-c2
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- bsdmainutils dpkg-dev file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libdpkg-perl libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make debian-keyring
- gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
- autotools-dev libalgorithm-merge-perl curl wget lynx-cur autopoint
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-The following packages will be upgraded:
- dpkg-dev libdpkg-perl
-2 upgraded, 19 newly installed, 0 to remove and 15 not upgraded.
-Need to get 12.2 MB of archives.
-After this operation, 30.3 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
+Need to get 9385 kB of archives.
+After this operation, 28.8 MB of additional disk space will be used.
Get:1 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils powerpc 8.2.2 [209 kB]
Get:2 http://ftp.uk.debian.org/debian/ unstable/main groff-base powerpc 1.21-5 [1189 kB]
Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.0-1 [37.2 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.0.1-1 [1018 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 5.04-5 [241 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 5.04-5 [49.9 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.0.2-1 [1020 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 5.04-5+b1 [240 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 5.04-5+b1 [49.9 kB]
Get:7 http://ftp.uk.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-3 [141 kB]
Get:8 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 powerpc 8.12-3 [258 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-2 [849 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main dpkg-dev powerpc 1.16.0.1 [871 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main libdpkg-perl powerpc 1.16.0.1 [748 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.28.4-1 [1601 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.2-1 [128 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-3 [422 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-3 [2046 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian powerpc 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main po-debconf powerpc 1.0.16+nmu1 [223 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main debhelper powerpc 8.1.3 [554 kB]
-Get:20 http://ftp.uk.debian.org/debian/ unstable/main cdbs powerpc 0.4.92 [1268 kB]
-Get:21 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.3.4.dfsg-3 [190 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-2+b1 [853 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.28.6-1 [1611 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.2-1 [128 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-4 [422 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-3 [2046 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.3.4.dfsg-3 [190 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.2 MB in 2s (5791 kB/s)
+Fetched 9385 kB in 4s (2112 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10241 files and directories currently installed.)
+(Reading database ... 10573 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_powerpc.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_powerpc.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_powerpc.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_powerpc.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_powerpc.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_powerpc.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_powerpc.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5_powerpc.deb) ...
+Unpacking file (from .../file_5.04-5+b1_powerpc.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_powerpc.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_powerpc.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_powerpc.deb) ...
-Preparing to replace dpkg-dev 1.15.8.10 (using .../dpkg-dev_1.16.0.1_powerpc.deb) ...
-Unpacking replacement dpkg-dev ...
-Preparing to replace libdpkg-perl 1.15.8.10 (using .../libdpkg-perl_1.16.0.1_powerpc.deb) ...
-Unpacking replacement libdpkg-perl ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_powerpc.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_powerpc.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_powerpc.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_powerpc.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_powerpc.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_powerpc.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_powerpc.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_powerpc.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_powerpc.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_powerpc.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_powerpc.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../cdbs_0.4.92_powerpc.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_powerpc.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -259,38 +242,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up libdpkg-perl (1.16.0.1) ...
-Setting up dpkg-dev (1.16.0.1) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libppl7 libppl-c2
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.26-2-powerpc64 powerpc (ppc64)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.5_4.5.2-8 gcc-4.5_4.5.2-8 libc6-dev_2.11.2-11 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 linux-libc-dev_2.6.38-2
-Package versions: apt_0.8.13 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.5.2-4 cpp-4.5_4.5.2-8 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.5.2-4 g++-4.5_4.5.2-8 gcc_4:4.5.2-4 gcc-4.4-base_4.4.5-15 gcc-4.5_4.5.2-8 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libelfg0_0.8.13-1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-2 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpc2_0.9-2 libmpfr4_3.0.0-9 libncurses5_5.8-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c2_0.10.2-9 libppl-c4_0.11.2-3 libppl7_0.10.2-9 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.2-4 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.5-dev_4.5.2-8 libtext-charwidth-perl_0.04-6+b1 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8-1 ncurses-bin_5.8-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-18 perl-base_5.10.1-18 perl-modules_5.10.1-18 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011d-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 libc6-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 linux-libc-dev_2.6.38-5
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-7 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-5 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -302,12 +280,12 @@ Unpack source
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -323,8 +301,8 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture powerpc
fakeroot debian/rules clean
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -334,12 +312,12 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
dh_clean
debian/rules build
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -349,21 +327,23 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -394,6 +374,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -412,55 +393,54 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_powerpc.deb'.
- dpkg-genchanges -B -mpowerpc Build Daemon (porpora) <buildd_powerpc-porpora at buildd.debian.org> >../tabix_0.2.4-1_powerpc.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_powerpc.deb'.
+ dpkg-genchanges -B -mpowerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org> >../tabix_0.2.5-1_powerpc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0946
+Build finished at 20110510-1115
-tabix_0.2.4-1_powerpc.changes:
+tabix_0.2.5-1_powerpc.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: powerpc
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: powerpc Build Daemon (porpora) <buildd_powerpc-porpora at buildd.debian.org>
+Maintainer: powerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 7f4c421196edc7ae6701f2eb7f3ed55f8c6bebe1 58194 tabix_0.2.4-1_powerpc.deb
+ 2de9c94fc6184a0b74adb013d03dc9fd058c7855 60112 tabix_0.2.5-1_powerpc.deb
Checksums-Sha256:
- f0cd7ec1e24676240cf1633626836ae20da60b8ca48201a873d81e0d60c7acce 58194 tabix_0.2.4-1_powerpc.deb
+ ab56d07c65af628c81564b0cfe6b894a6294dc01f170521c429617907e87ecd2 60112 tabix_0.2.5-1_powerpc.deb
Files:
- ecb4a56ff45c45a4b724575fa149268f 58194 science optional tabix_0.2.4-1_powerpc.deb
+ dd476f3bfa58f6075c3dc84dbfdc5fa9 60112 science optional tabix_0.2.5-1_powerpc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_powerpc.deb
+tabix_0.2.5-1_powerpc.deb
─────────────────────────
new debian package, version 2.0.
- size 58194 bytes: control archive= 959 bytes.
+ size 60112 bytes: control archive= 998 bytes.
787 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: powerpc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Installed-Size: 168
@@ -476,25 +456,26 @@ tabix_0.2.4-1_powerpc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/bin/
--rwxr-xr-x root/root 65732 2011-04-12 09:46 ./usr/bin/tabix
--rwxr-xr-x root/root 25252 2011-04-12 09:46 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:46 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:15 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 09:46 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-lrwxrwxrwx root/root 0 2011-04-12 09:46 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/bin/
+-rwxr-xr-x root/root 67656 2011-05-10 11:15 ./usr/bin/tabix
+-rwxr-xr-x root/root 24052 2011-05-10 11:15 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2011-05-10 11:15 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -508,7 +489,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-powerpc-sbuild-77fdb2b1-e638-4fce-addc-36efe3c0f883/build/buildd-tabix_0.2.4-1-powerpc-EgRMKo
+Purging /var/lib/schroot/mount/sid-powerpc-sbuild-a2291399-426c-4753-95b1-690e0b51d587/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -516,18 +497,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: powerpc
-Build-Space: 1412
-Build-Time: 22
+Build-Space: 1452
+Build-Time: 20
Distribution: sid
-Install-Time: 74
-Job: tabix_0.2.4-1
+Install-Time: 62
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 138
-Source-Version: 0.2.4-1
-Space: 1412
+Package-Time: 124
+Source-Version: 0.2.5-1
+Space: 1452
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0946
-Build needed 00:02:18, 1412k disc space
-Signature with key 'CDFA0A89' requested:
+Finished at 20110510-1115
+Build needed 00:02:04, 1452k disc space
+Signature with key '205E9E83' requested:
diff --git a/s390.log b/s390.log
index 6659278..fe6b593 100644
--- a/s390.log
+++ b/s390.log
@@ -1,69 +1,69 @@
-From buildd at zandonai.debian.org Tue Apr 12 09:50:26 2011
+From buildd at zandonai.debian.org Tue May 10 11:17:11 2011
Return-path: <buildd at zandonai.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at zandonai.debian.org>)
- id 1Q9aEr-0003ry-PQ
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:50:25 +0000
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
+ id 1QJkwA-0006LG-Us
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:17:11 +0000
Received: from zandonai.debian.org ([80.245.147.46])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1Q9aEl-00033m-6o; Tue, 12 Apr 2011 09:50:19 +0000
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.69) (envelope-from <buildd at zandonai.debian.org>)
+ id 1QJkwD-0003cm-2e; Tue, 10 May 2011 11:17:13 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.69)
(envelope-from <buildd at zandonai.debian.org>)
- id 1Q9aEk-0005Ye-N7; Tue, 12 Apr 2011 09:50:18 +0000
+ id 1QJkw9-0006dY-RF; Tue, 10 May 2011 11:17:09 +0000
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 12 Apr 2011 09:50:18 +0000
+Date: Tue, 10 May 2011 11:17:09 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on s390 (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-1 on s390 (dist=sid)
Key-Id: 9BD94C88
-Message-Id: <E1Q9aEk-0005Ye-N7 at zandonai.debian.org>
+Message-Id: <E1QJkw9-0006dY-RF at zandonai.debian.org>
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (s390) 12 Apr 2011 09:49 ║
+║ tabix 0.2.5-1 (s390) 10 May 2011 11:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: s390
-Get:1 http://ftp.de.debian.org unstable InRelease [151 kB]
-Get:2 http://incoming.debian.org unstable InRelease [151 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [5264 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [48.2 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.4 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390 Packages [6988 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [51.4 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [51.4 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.1 kB]
+Get:8 http://ftp.de.debian.org unstable/main s390 Packages [7093 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [53.4 kB]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2264 B]
Ign http://ftp.de.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main s390 Packages [6985 kB]
-Get:14 http://incoming.debian.org unstable/contrib s390 Packages [51.4 kB]
+Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:13 http://incoming.debian.org unstable/main s390 Packages [7093 kB]
+Get:14 http://incoming.debian.org unstable/contrib s390 Packages [53.4 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [49.0 kB]
-Get:18 http://incoming.debian.org Packages [775 kB]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org unstable/contrib Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 26.0 MB in 26s (982 kB/s)
+Fetched 26.8 MB in 25s (1034 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (88.5 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (89.5 kB/s)
Download complete and in download only mode
Check arch
@@ -108,12 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -122,38 +122,38 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.1)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.15.8.10)
+dpkg: already installed (1.16.0.2)
e2fsprogs: already installed (1.41.12-2)
findutils: already installed (4.4.2-1+b1)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
-ncurses-bin: already installed (5.8+20110307-1)
-perl-base: already installed (5.10.1-18)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-11)
-gcc: already installed (4:4.4.5-6 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-6 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.15.8.10 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-2)
+gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
@@ -161,88 +161,80 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpkg-dev file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libdpkg-perl libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make debian-keyring
- gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
- autotools-dev libalgorithm-merge-perl curl wget lynx-cur autopoint
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-The following packages will be upgraded:
- dpkg-dev libdpkg-perl
-2 upgraded, 19 newly installed, 0 to remove and 17 not upgraded.
-Need to get 12.2 MB of archives.
-After this operation, 29.9 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 20 not upgraded.
+Need to get 9439 kB of archives.
+After this operation, 28.4 MB of additional disk space will be used.
Get:1 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 8.2.2 [208 kB]
Get:2 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-5 [1158 kB]
Get:3 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.0-1 [38.7 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.0.1-1 [1017 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.04-5 [243 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main file s390 5.04-5 [50.0 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.0.2-1 [1017 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.04-5+b1 [243 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main file s390 5.04-5+b1 [50.1 kB]
Get:7 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-3 [142 kB]
Get:8 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 8.12-3 [262 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-2 [873 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main dpkg-dev s390 1.16.0.1 [871 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libdpkg-perl s390 1.16.0.1 [748 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.28.4-1 [1635 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.2-1 [128 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-3 [431 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-3 [2068 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main intltool-debian s390 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main po-debconf s390 1.0.16+nmu1 [223 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main debhelper s390 8.1.3 [554 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main cdbs s390 0.4.92 [1268 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.3.4.dfsg-3 [193 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-2+b1 [873 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.28.6-1 [1639 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.2-1 [128 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-4 [431 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-3 [2068 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.3.4.dfsg-3 [193 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.2 MB in 4s (3001 kB/s)
+Fetched 9439 kB in 2s (3212 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10051 files and directories currently installed.)
+(Reading database ... 10521 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_s390.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_s390.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_s390.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_s390.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_s390.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_s390.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_s390.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_s390.deb) ...
+Unpacking file (from .../file_5.04-5+b1_s390.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_s390.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_s390.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_s390.deb) ...
-Preparing to replace dpkg-dev 1.15.8.10 (using .../dpkg-dev_1.16.0.1_s390.deb) ...
-Unpacking replacement dpkg-dev ...
-Preparing to replace libdpkg-perl 1.15.8.10 (using .../libdpkg-perl_1.16.0.1_s390.deb) ...
-Unpacking replacement libdpkg-perl ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_s390.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_s390.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_s390.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_s390.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_s390.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_s390.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_s390.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_s390.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_s390.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_s390.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_s390.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_s390.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_s390.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -250,35 +242,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up libdpkg-perl (1.16.0.1) ...
-Setting up dpkg-dev (1.16.0.1) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-bpo.5-s390x s390 (s390x)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.4_4.4.5-15 gcc-4.4_4.4.5-15 libc6-dev_2.11.2-11 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 linux-libc-dev_2.6.38-2
-Package versions: apt_0.8.13 base-files_6.1 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-6 cpp-4.4_4.4.5-15 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b1 g++_4:4.4.5-6 g++-4.4_4.4.5-15 gcc_4:4.4.5-6 gcc-4.4_4.4.5-15 gcc-4.4-base_4.4.5-15 gcc-4.5-base_4.5.2-8 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-5 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblocale-gettext-perl_1.05-6 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.2-4 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 libtext-charwidth-perl_0.04-6 libtext-iconv-perl_1.7-2 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-18 perl-base_5.10.1-18 perl-modules_5.10.1-18 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011d-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.6_4.6.0-6 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4-base_4.4.6-2 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -290,12 +280,12 @@ Unpack source
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -311,8 +301,8 @@ dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390
fakeroot debian/rules clean
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -322,12 +312,12 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
dh_clean
debian/rules build
Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
@@ -337,21 +327,23 @@ Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/s
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-s390-yUcvD4/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
@@ -382,6 +374,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -400,22 +393,22 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_s390.deb'.
- dpkg-genchanges -B -ms390 Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.4-1_s390.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_s390.deb'.
+ dpkg-genchanges -B -ms390 Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-1_s390.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0950
+Build finished at 20110510-1117
-tabix_0.2.4-1_s390.changes:
+tabix_0.2.5-1_s390.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: s390
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
Maintainer: s390 Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
@@ -423,35 +416,34 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- b7e1d5ca5e47cbc5eab0d038fad2175906e6666f 54688 tabix_0.2.4-1_s390.deb
+ 361ad6d3bd39c79a07609263a0318ec84c71a2aa 58552 tabix_0.2.5-1_s390.deb
Checksums-Sha256:
- 69250d445aa56fbf15ba67026d8cf4adfc362470a03026a0826db7b297126cb2 54688 tabix_0.2.4-1_s390.deb
+ 83a29474b0865ae85bc6aa9a473a319808651a951035ffc6288fc09966894bd9 58552 tabix_0.2.5-1_s390.deb
Files:
- 309ca9ad7980c21bc5715bc60bb2c697 54688 science optional tabix_0.2.4-1_s390.deb
+ 6038141cc5c35caf1ff72ef711085929 58552 science optional tabix_0.2.5-1_s390.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_s390.deb
+tabix_0.2.5-1_s390.deb
──────────────────────
new debian package, version 2.0.
- size 54688 bytes: control archive= 958 bytes.
+ size 58552 bytes: control archive= 994 bytes.
784 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: s390
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 168
+ Installed-Size: 180
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -464,25 +456,26 @@ tabix_0.2.4-1_s390.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/bin/
--rwxr-xr-x root/root 25792 2011-04-12 09:50 ./usr/bin/bgzip
--rwxr-xr-x root/root 67528 2011-04-12 09:50 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:50 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
+-rwxr-xr-x root/root 26612 2011-05-10 11:17 ./usr/bin/bgzip
+-rwxr-xr-x root/root 73908 2011-05-10 11:17 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-04-12 09:50 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2011-04-12 09:50 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -496,7 +489,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390-sbuild-84b4c003-4d11-4431-aa2d-bb91400b31ac/build/buildd-tabix_0.2.4-1-s390-yUcvD4
+Purging /var/lib/schroot/mount/sid-s390-sbuild-1d027449-01d5-4a5e-ac51-5e45cc1afa82/build/buildd-tabix_0.2.5-1-s390-Vl3vf0
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -504,18 +497,493 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390
-Build-Space: 1392
+Build-Space: 1588
Build-Time: 12
Distribution: sid
-Install-Time: 22
-Job: tabix_0.2.4-1
+Install-Time: 21
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 68
-Source-Version: 0.2.4-1
-Space: 1392
+Package-Time: 70
+Source-Version: 0.2.5-1
+Space: 1588
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0950
-Build needed 00:01:08, 1392k disc space
+Finished at 20110510-1117
+Build needed 00:01:10, 1588k disc space
Signature with key '9BD94C88' requested:
+From buildd at zandonai.debian.org Sun Nov 27 01:21:51 2011
+Return-path: <buildd at zandonai.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
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+ for logs at buildd.debian.org; Sun, 27 Nov 2011 01:21:51 +0000
+Received: from zandonai.debian.org ([80.245.147.46])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=zandonai.debian.org,
+ EMAIL=hostmaster at zandonai.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
+ id 1RUTRH-0008LD-28; Sun, 27 Nov 2011 01:21:51 +0000
+Received: from buildd by zandonai.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at zandonai.debian.org>)
+ id 1RUTRG-0005NP-JZ; Sun, 27 Nov 2011 01:21:50 +0000
+Message-Id: <E1RUTRG-0005NP-JZ at zandonai.debian.org>
+MIME-Version: 1.0
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Sun, 27 Nov 2011 01:21:50 +0000
+From: buildd on zandonai <buildd at zandonai.debian.org>
+To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on s390x (dist=sid)
+Key-Id: 96C8554F
+Delivered-To: logs at buildd.debian.org
+
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+
+╔══════════════════════════════════════════════════════════════════════════════╗
+║ tabix 0.2.5-1 (s390x) 27 Nov 2011 01:21 ║
+╚══════════════════════════════════════════════════════════════════════════════╝
+
+Package: tabix
+Version: 0.2.5-1
+Source Version: 0.2.5-1
+Architecture: s390x
+Get:1 http://ftp.de.debian.org unstable InRelease [181 kB]
+Get:2 http://ftp.de.debian.org unstable/main Sources [5921 kB]
+Get:3 http://incoming.debian.org unstable InRelease [181 kB]
+Ign http://incoming.debian.org InRelease
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [5921 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [56.5 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [103 kB]
+Get:8 http://ftp.de.debian.org unstable/main s390x Packages [3917 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib s390x Packages [33.4 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2045 B]
+Ign http://ftp.de.debian.org unstable/contrib Translation-en
+Get:11 http://incoming.debian.org unstable/contrib Sources [56.5 kB]
+Get:12 http://incoming.debian.org unstable/non-free Sources [103 kB]
+Get:13 http://incoming.debian.org unstable/main s390x Packages [3917 kB]
+Get:14 http://incoming.debian.org unstable/contrib s390x Packages [33.4 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:15 http://incoming.debian.org unstable/main TranslationIndex [2045 B]
+Get:16 http://incoming.debian.org Release [1616 B]
+Get:17 http://incoming.debian.org Sources [29.8 kB]
+Get:18 http://incoming.debian.org Packages [1002 kB]
+Ign http://incoming.debian.org unstable/contrib Translation-en
+Ign http://incoming.debian.org Translation-en
+Fetched 21.5 MB in 18s (1149 kB/s)
+Reading package lists...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Fetch source files │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Check APT
+─────────
+
+Checking available source versions...
+
+Download source files with APT
+──────────────────────────────
+
+Reading package lists...
+Building dependency tree...
+Reading state information...
+NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
+git://git.debian.org/debian-med/tabix.git
+Need to get 59.1 kB of source archives.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (321 kB/s)
+Download complete and in download only mode
+
+Check arch
+──────────
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install core build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5)
+fakeroot: already installed (1.18.1-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Checking for already installed dependencies...
+libc6-dev: already installed (2.13-21)
+gcc: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+cdbs: missing
+debhelper: missing
+Using default version 8.9.11
+zlib1g-dev: missing
+Checking for dependency conflicts...
+Installing positive dependencies: cdbs debhelper zlib1g-dev
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following extra packages will be installed:
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
+Suggested packages:
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
+Recommended packages:
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
+The following NEW packages will be installed:
+ bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 20 newly installed, 0 to remove and 1 not upgraded.
+Need to get 9843 kB of archives.
+After this operation, 28.2 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.0-5 [39.4 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 8.12-4 [234 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3 [26.1 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.30.2-4 [1866 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-5 [890 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.2-2 [123 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5 [438 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 8.2.3 [213 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-6 [1181 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.0.2-3 [1021 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.09-2 [253 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.09-2 [52.7 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5 [155 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.99 [77.1 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15 [111 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5 [2157 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.9.11 [552 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.3.4.dfsg-3 [199 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 9843 kB in 2s (3390 kB/s)
+Selecting previously unselected package libpipeline1.
+(Reading database ... 10717 files and directories currently installed.)
+Unpacking libpipeline1 (from .../libpipeline1_1.2.0-5_s390x.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_8.12-4_s390x.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_s390x.deb) ...
+Selecting previously unselected package libglib2.0-0.
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-4_s390x.deb) ...
+Selecting previously unselected package libxml2.
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5_s390x.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.2-2_s390x.deb) ...
+Selecting previously unselected package libunistring0.
+Unpacking libunistring0 (from .../libunistring0_0.9.3-5_s390x.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_s390x.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-6_s390x.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.0.2-3_s390x.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.09-2_s390x.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.09-2_s390x.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_s390x.deb) ...
+Selecting previously unselected package cdbs.
+Unpacking cdbs (from .../archives/cdbs_0.4.99_all.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15_s390x.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_s390x.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_8.9.11_all.deb) ...
+Selecting previously unselected package zlib1g-dev.
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_s390x.deb) ...
+Setting up libpipeline1 (1.2.0-5) ...
+Setting up libpcre3 (8.12-4) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.30.2-4) ...
+No schema files found: doing nothing.
+Setting up libxml2 (2.7.8.dfsg-5) ...
+Setting up libcroco3 (0.6.2-2) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up bsdmainutils (8.2.3) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-6) ...
+Setting up man-db (2.6.0.2-3) ...
+Building database of manual pages ...
+Setting up libmagic1 (5.09-2) ...
+Setting up file (5.09-2) ...
+Setting up gettext-base (0.18.1.1-5) ...
+Setting up cdbs (0.4.99) ...
+Setting up html2text (1.3.2a-15) ...
+Setting up gettext (0.18.1.1-5) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu1) ...
+Setting up debhelper (8.9.11) ...
+Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+Checking correctness of dependencies...
+Kernel: Linux 2.6.32-5-s390x s390x (s390x)
+Toolchain package versions: binutils_2.22-1 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-5 gcc-4.6_4.6.2-5 libc6-dev_2.13-21 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 linux-libc-dev_3.1.1-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.22-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.99 coreutils_8.13-3 cpp_4:4.6.1-3 cpp-4.6_4.6.2-5 dash_0.5.7-2 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1 debhelper_8.9.11 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.2 e2fslibs_1.42~WIP-2011-11-20-1 e2fsprogs_1.42~WIP-2011-11-20-1 fakeroot_1.18.1-1 file_5.09-2 findutils_4.4.2-1 g++_4:4.6.1-3 g++-4.6_4.6.2-5 gcc_4:4.6.1-3 gcc-4.6_4.6.2-5 gcc-4.6-base_4.6.2-5 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-2 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-4 libattr1_1:2.4.46-3 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-21 libc-dev-bin_2.13-21 libc6_2.13-21 libc6-dev_2.13-21 libclass-isa-perl_0.36-3 libcomerr2_1.42~WIP-2011-11-20-1 libcroco3_0.6.2-2 libdb5.1_5.1.25-11 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-5 libgdbm3_1.8.3-10 libglib2.0-0_2.30.2-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-5 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.09-2 libmount1_2.19.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_8.12-4 libpipeline1_1.2.0-5 libreadline6_6.2-8 libselinux1_2.1.0-4 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libss2_1.42~WIP-2011-11-20-1 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4.1 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libxml2_2.7.8.dfsg-5 linux-libc-dev_3.1.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-3 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-5 perl-base_5.14.2-5 perl-modules_5.14.2-5 po-debconf_1.0.16+nmu1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-2 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-3 tzdata_2011n-1 util-linux_2.19.1-5 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Unpack source
+─────────────
+
+gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Can't check signature: public key not found
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+
+Check disc space
+────────────────
+
+
+dpkg-buildpackage
+─────────────────
+
+dpkg-buildpackage: source package tabix
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
+dpkg-buildpackage: host architecture s390x
+ fakeroot debian/rules clean
+test -x debian/rules
+dh_testroot
+rm -f debian/stamp-makefile-build debian/stamp-makefile-install
+/usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+dh_clean
+ debian/rules build
+test -x debian/rules
+mkdir -p "."
+/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
+/usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+bgzf.c: In function 'bgzf_close':
+bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+touch debian/stamp-makefile-build
+DEB_MAKE_CHECK_TARGET unset, not running checks
+ fakeroot debian/rules binary-arch
+test -x debian/rules
+dh_testroot
+dh_prep
+dh_installdirs -A
+mkdir -p "."
+/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
+DEB_MAKE_CHECK_TARGET unset, not running checks
+DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
+Adding cdbs dependencies to debian/tabix.substvars
+dh_installdirs -ptabix
+dh_installdocs -ptabix ./NEWS
+dh_installexamples -ptabix
+dh_installman -ptabix
+dh_installinfo -ptabix
+dh_installmenu -ptabix
+dh_installcron -ptabix
+dh_installinit -ptabix
+dh_installdebconf -ptabix
+dh_installemacsen -ptabix
+dh_installcatalogs -ptabix
+dh_installpam -ptabix
+dh_installlogrotate -ptabix
+dh_installlogcheck -ptabix
+dh_installchangelogs -ptabix ./ChangeLog
+dh_installudev -ptabix
+dh_lintian -ptabix
+dh_bugfiles -ptabix
+dh_install -ptabix
+dh_link -ptabix
+dh_installmime -ptabix
+dh_installgsettings -ptabix
+dh_strip -ptabix
+dh_compress -ptabix -X .tbi
+dh_fixperms -ptabix
+dh_makeshlibs -ptabix
+dh_installdeb -ptabix
+dh_perl -ptabix
+dh_shlibdeps -ptabix
+dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
+dh_gencontrol -ptabix
+dh_md5sums -ptabix
+dh_builddeb -ptabix
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-1_s390x.changes
+dpkg-genchanges: arch-specific upload - not including arch-independent packages
+dpkg-genchanges: binary-only upload - not including any source code
+ dpkg-source --after-build tabix-0.2.5
+dpkg-buildpackage: binary only upload (no source included)
+────────────────────────────────────────────────────────────────────────────────
+Build finished at 20111127-0121
+
+tabix_0.2.5-1_s390x.changes:
+Format: 1.8
+Date: Tue, 10 May 2011 19:42:07 +0900
+Source: tabix
+Binary: tabix
+Architecture: s390x
+Version: 0.2.5-1
+Distribution: sid
+Urgency: low
+Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
+Description:
+ tabix - generic indexer for TAB-delimited genome position files
+Changes:
+ tabix (0.2.5-1) unstable; urgency=low
+ .
+ * New upstream release.
+ * Added debian/README.test to explain how to test tabix and bgzip.
+Checksums-Sha1:
+ 43b5cbe29f879328523e0f0d37d8e751d090e8f2 61704 tabix_0.2.5-1_s390x.deb
+Checksums-Sha256:
+ 815e4d001e0ba24b6fb40ba986274a86e8e5827f6603bcb8f11d0930de382cc7 61704 tabix_0.2.5-1_s390x.deb
+Files:
+ 29af47ff096c864ddef090aa8bce088c 61704 science optional tabix_0.2.5-1_s390x.deb
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Package contents │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+tabix_0.2.5-1_s390x.deb
+───────────────────────
+
+ new debian package, version 2.0.
+ size 61704 bytes: control archive= 996 bytes.
+ 786 bytes, 16 lines control
+ 653 bytes, 10 lines md5sums
+ Package: tabix
+ Version: 0.2.5-1
+ Architecture: s390x
+ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+ Installed-Size: 160
+ Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3.dfsg)
+ Section: science
+ Priority: optional
+ Homepage: http://samtools.sourceforge.net/tabix.shtml
+ Description: generic indexer for TAB-delimited genome position files
+ Tabix indexes files where some columns indicate sequence coordinates: name
+ (usually a chromosme), start and stop. The input data file must be position
+ sorted and compressed by bgzip (provided in this package), which has a gzip
+ like interface. After indexing, tabix is able to quickly retrieve data lines by
+ chromosomal coordinates. Fast data retrieval also works over network if an URI
+ is given as a file name.
+
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/bin/
+-rwxr-xr-x root/root 29672 2011-11-27 01:21 ./usr/bin/bgzip
+-rwxr-xr-x root/root 77808 2011-11-27 01:21 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-11-27 01:21 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+lrwxrwxrwx root/root 0 2011-11-27 01:21 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Finished │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Built successfully
+────────────────────────────────────────────────────────────────────────────────
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-adf9aa1a-cb87-414e-91c3-963ed97e3330/sid-s390x-sbuild/build/buildd-tabix_0.2.5-1-s390x-s9TZP5
+Not cleaning session: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: s390x
+Build-Space: 1880
+Build-Time: 10
+Distribution: sid
+Install-Time: 8
+Job: tabix_0.2.5-1
+Package: tabix
+Package-Time: 46
+Source-Version: 0.2.5-1
+Space: 1880
+Status: successful
+Version: 0.2.5-1
+────────────────────────────────────────────────────────────────────────────────
+Finished at 20111127-0121
+Build needed 00:00:46, 1880k disc space
+Signature with key '96C8554F' requested:
diff --git a/sparc.log b/sparc.log
index 0509522..2aa48f9 100644
--- a/sparc.log
+++ b/sparc.log
@@ -1,69 +1,70 @@
-From buildd at lebrun.debian.org Tue Apr 12 09:57:21 2011
-Return-path: <buildd at lebrun.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at spontini.debian.org Tue May 10 11:20:22 2011
+Return-path: <buildd at spontini.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at lebrun.debian.org>)
- id 1Q9aLZ-0005bX-9A
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:57:21 +0000
-Received: from lebrun.debian.org ([193.198.184.10])
+ (Exim 4.72) (envelope-from <buildd at spontini.debian.org>)
+ id 1QJkzG-0006rk-E4
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:20:22 +0000
+Received: from spontini.debian.org ([2607:f8f0:610:4000:a00:20ff:fea0:918b])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=lebrun.debian.org, EMAIL=hostmaster at lebrun.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at lebrun.debian.org>)
- id 1Q9aLS-0003HH-L1
- for logs at buildd.debian.org; Tue, 12 Apr 2011 09:57:14 +0000
-Received: from buildd by lebrun.debian.org with local (Exim 4.69)
- (envelope-from <buildd at lebrun.debian.org>)
- id 1Q9aLS-00021S-BT; Tue, 12 Apr 2011 09:57:14 +0000
+ CN=spontini.debian.org,
+ EMAIL=hostmaster at spontini.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.69) (envelope-from <buildd at spontini.debian.org>)
+ id 1QJkzI-0003gJ-7I
+ for logs at buildd.debian.org; Tue, 10 May 2011 11:20:24 +0000
+Received: from buildd by spontini.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at spontini.debian.org>)
+ id 1QJkzB-0001RB-LW; Tue, 10 May 2011 11:20:17 +0000
+Message-Id: <E1QJkzB-0001RB-LW at spontini.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 12 Apr 2011 09:57:14 +0000
-From: buildd on lebrun <buildd at lebrun.debian.org>
-To: logs at buildd.debian.org,buildd-admin at lebrun.debian.org
-Subject: Log for successful build of tabix_0.2.4-1 on sparc (dist=sid)
-Key-Id: 81587D01
-Message-Id: <E1Q9aLS-00021S-BT at lebrun.debian.org>
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Tue, 10 May 2011 11:20:17 +0000
+From: buildd on spontini <buildd at spontini.debian.org>
+To: logs at buildd.debian.org,buildd-admin at spontini.debian.org
+Subject: Log for successful build of tabix_0.2.5-1 on sparc (dist=sid)
+Key-Id: 3B3DF88C
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on lebrun.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on spontini.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.4-1 (sparc) 12 Apr 2011 09:54 ║
+║ tabix 0.2.5-1 (sparc) 10 May 2011 11:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.4-1
-Source Version: 0.2.4-1
+Version: 0.2.5-1
+Source Version: 0.2.5-1
Architecture: sparc
-Get:1 http://debian.carnet.hr unstable InRelease [151 kB]
-Get:2 http://incoming.debian.org unstable InRelease [151 kB]
-Get:3 http://debian.carnet.hr unstable/main Sources [5265 kB]
-Get:4 http://debian.carnet.hr unstable/contrib Sources [48.2 kB]
+Get:1 http://mirror-ubc.debian.org unstable InRelease [167 kB]
+Get:2 http://incoming.debian.org unstable InRelease [167 kB]
+Get:3 http://mirror-ubc.debian.org unstable/main Sources [5657 kB]
Ign http://incoming.debian.org InRelease
-Get:5 http://incoming.debian.org Release.gpg [836 B]
-Get:6 http://debian.carnet.hr unstable/non-free Sources [97.4 kB]
-Get:7 http://incoming.debian.org unstable/main Sources [5265 kB]
-Get:8 http://debian.carnet.hr unstable/main sparc Packages [7009 kB]
-Get:9 http://debian.carnet.hr unstable/contrib sparc Packages [52.5 kB]
-Ign http://debian.carnet.hr unstable/contrib TranslationIndex
-Get:10 http://debian.carnet.hr unstable/main TranslationIndex [2264 B]
-Get:11 http://incoming.debian.org unstable/contrib Sources [48.2 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.4 kB]
-Get:13 http://incoming.debian.org unstable/main sparc Packages [7009 kB]
-Get:14 http://incoming.debian.org unstable/contrib sparc Packages [52.5 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1604 B]
+Get:6 http://incoming.debian.org unstable/main Sources [5657 kB]
+Get:7 http://mirror-ubc.debian.org unstable/contrib Sources [51.4 kB]
+Get:8 http://mirror-ubc.debian.org unstable/non-free Sources [97.1 kB]
+Get:9 http://mirror-ubc.debian.org unstable/main sparc Packages [7115 kB]
+Get:10 http://mirror-ubc.debian.org unstable/contrib sparc Packages [54.4 kB]
+Ign http://mirror-ubc.debian.org unstable/contrib TranslationIndex
+Get:11 http://mirror-ubc.debian.org unstable/main TranslationIndex [2264 B]
+Ign http://mirror-ubc.debian.org unstable/contrib Translation-en
+Get:12 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
+Get:13 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
+Get:14 http://incoming.debian.org unstable/main sparc Packages [7115 kB]
+Get:15 http://incoming.debian.org unstable/contrib sparc Packages [54.4 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Ign http://debian.carnet.hr unstable/contrib Translation-en
-Get:17 http://incoming.debian.org Sources [48.9 kB]
-Get:18 http://incoming.debian.org Packages [773 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:16 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
+Get:17 http://incoming.debian.org Sources [27.9 kB]
+Get:18 http://incoming.debian.org Packages [545 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 26.1 MB in 27s (957 kB/s)
+Ign http://incoming.debian.org unstable/contrib Translation-en
+Fetched 26.9 MB in 1min 1s (438 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +85,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 58.4 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.4-1 (diff) [2322 B]
-Fetched 58.4 kB in 0s (77.5 kB/s)
+Need to get 59.1 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
+Fetched 59.1 kB in 0s (94.1 kB/s)
Download complete and in download only mode
Check arch
@@ -108,12 +109,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 14 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 14 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -122,39 +123,39 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.1)
+base-files: already installed (6.3)
base-passwd: already installed (3.5.22+b1)
bash: already installed (4.1-3)
coreutils: already installed (8.5-1)
dash: already installed (0.5.5.1-7.4)
debianutils: already installed (3.4.4)
diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.15.8.10)
-e2fsprogs: already installed (1.41.12-2)
+dpkg: already installed (1.16.0.3)
+e2fsprogs: already installed (1.41.12-4)
findutils: already installed (4.4.2-1+b2)
grep: already installed (2.6.3-3)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-ncurses-base: already installed (5.8+20110307-1)
-ncurses-bin: already installed (5.8+20110307-1)
-perl-base: already installed (5.10.1-19)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-1)
+perl-base: already installed (5.12.3-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.1)
-sysvinit: already installed (2.88dsf-13.1)
+sysvinit-utils: already installed (2.88dsf-13.2)
+sysvinit: already installed (2.88dsf-13.2)
tar: already installed (1.25-3)
bsdutils: already installed (1:2.17.2-9.1)
mount: already installed (2.17.2-9.1)
util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.11.2-11)
-libc6-dev-sparc64: already installed (2.11.2-11)
-gcc: already installed (4:4.4.5-6 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-6 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8)
-dpkg-dev: already installed (1.15.8.10 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-2)
+libc6-dev-sparc64: already installed (2.13-2)
+gcc: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
cdbs: missing
debhelper: missing
-Using default version 8.1.3
+Using default version 8.1.6
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: cdbs debhelper zlib1g-dev
@@ -162,88 +163,80 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpkg-dev file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libdpkg-perl libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts doc-base dh-make debian-keyring
- gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
+ www-browser libmail-box-perl
Recommended packages:
- autotools-dev libalgorithm-merge-perl curl wget lynx-cur autopoint
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
libunistring0 libxml2 man-db po-debconf zlib1g-dev
-The following packages will be upgraded:
- dpkg-dev libdpkg-perl
-2 upgraded, 19 newly installed, 0 to remove and 12 not upgraded.
-Need to get 12.0 MB of archives.
-After this operation, 29.7 MB of additional disk space will be used.
-Get:1 http://debian.carnet.hr/debian/ unstable/main bsdmainutils sparc 8.2.2 [205 kB]
-Get:2 http://debian.carnet.hr/debian/ unstable/main groff-base sparc 1.21-5 [1152 kB]
-Get:3 http://debian.carnet.hr/debian/ unstable/main libpipeline1 sparc 1.2.0-1 [35.8 kB]
-Get:4 http://debian.carnet.hr/debian/ unstable/main man-db sparc 2.6.0.1-1 [1013 kB]
-Get:5 http://debian.carnet.hr/debian/ unstable/main libmagic1 sparc 5.04-5 [239 kB]
-Get:6 http://debian.carnet.hr/debian/ unstable/main file sparc 5.04-5 [49.5 kB]
-Get:7 http://debian.carnet.hr/debian/ unstable/main gettext-base sparc 0.18.1.1-3 [140 kB]
-Get:8 http://debian.carnet.hr/debian/ unstable/main libpcre3 sparc 8.12-3 [265 kB]
-Get:9 http://debian.carnet.hr/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-2 [840 kB]
-Get:10 http://debian.carnet.hr/debian/ unstable/main dpkg-dev sparc 1.16.0.1 [871 kB]
-Get:11 http://debian.carnet.hr/debian/ unstable/main libdpkg-perl sparc 1.16.0.1 [748 kB]
-Get:12 http://debian.carnet.hr/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
-Get:13 http://debian.carnet.hr/debian/ unstable/main libglib2.0-0 sparc 2.28.4-1 [1553 kB]
-Get:14 http://debian.carnet.hr/debian/ unstable/main libcroco3 sparc 0.6.2-1 [119 kB]
-Get:15 http://debian.carnet.hr/debian/ unstable/main libunistring0 sparc 0.9.3-3 [424 kB]
-Get:16 http://debian.carnet.hr/debian/ unstable/main gettext sparc 0.18.1.1-3 [2006 kB]
-Get:17 http://debian.carnet.hr/debian/ unstable/main intltool-debian sparc 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://debian.carnet.hr/debian/ unstable/main po-debconf sparc 1.0.16+nmu1 [223 kB]
-Get:19 http://debian.carnet.hr/debian/ unstable/main debhelper sparc 8.1.3 [554 kB]
-Get:20 http://debian.carnet.hr/debian/ unstable/main cdbs sparc 0.4.92 [1268 kB]
-Get:21 http://debian.carnet.hr/debian/ unstable/main zlib1g-dev sparc 1:1.2.3.4.dfsg-3 [189 kB]
+0 upgraded, 19 newly installed, 0 to remove and 5 not upgraded.
+Need to get 9220 kB of archives.
+After this operation, 28.2 MB of additional disk space will be used.
+Get:1 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils sparc 8.2.2 [205 kB]
+Get:2 http://mirror-ubc.debian.org/debian/ unstable/main groff-base sparc 1.21-5 [1152 kB]
+Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.0-1 [35.8 kB]
+Get:4 http://mirror-ubc.debian.org/debian/ unstable/main man-db sparc 2.6.0.2-1 [1013 kB]
+Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 sparc 5.04-5+b1 [239 kB]
+Get:6 http://mirror-ubc.debian.org/debian/ unstable/main file sparc 5.04-5+b1 [49.6 kB]
+Get:7 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base sparc 0.18.1.1-3 [140 kB]
+Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 sparc 8.12-3 [265 kB]
+Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-2+b1 [840 kB]
+Get:10 http://mirror-ubc.debian.org/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
+Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.28.6-1 [1556 kB]
+Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 sparc 0.6.2-1 [119 kB]
+Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-4 [424 kB]
+Get:14 http://mirror-ubc.debian.org/debian/ unstable/main gettext sparc 0.18.1.1-3 [2006 kB]
+Get:15 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:16 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
+Get:17 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
+Get:18 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
+Get:19 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.3.4.dfsg-3 [189 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 12.0 MB in 8s (1461 kB/s)
+Fetched 9220 kB in 1s (4712 kB/s)
Selecting previously deselected package bsdmainutils.
-(Reading database ... 10348 files and directories currently installed.)
+(Reading database ... 10783 files and directories currently installed.)
Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_sparc.deb) ...
Selecting previously deselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-5_sparc.deb) ...
Selecting previously deselected package libpipeline1.
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_sparc.deb) ...
Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.1-1_sparc.deb) ...
+Unpacking man-db (from .../man-db_2.6.0.2-1_sparc.deb) ...
Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5_sparc.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_sparc.deb) ...
Selecting previously deselected package file.
-Unpacking file (from .../archives/file_5.04-5_sparc.deb) ...
+Unpacking file (from .../file_5.04-5+b1_sparc.deb) ...
Selecting previously deselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_sparc.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_sparc.deb) ...
Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2_sparc.deb) ...
-Preparing to replace dpkg-dev 1.15.8.10 (using .../dpkg-dev_1.16.0.1_sparc.deb) ...
-Unpacking replacement dpkg-dev ...
-Preparing to replace libdpkg-perl 1.15.8.10 (using .../libdpkg-perl_1.16.0.1_sparc.deb) ...
-Unpacking replacement libdpkg-perl ...
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_sparc.deb) ...
Selecting previously deselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_sparc.deb) ...
Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.4-1_sparc.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_sparc.deb) ...
Selecting previously deselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-1_sparc.deb) ...
Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-3_sparc.deb) ...
+Unpacking libunistring0 (from .../libunistring0_0.9.3-4_sparc.deb) ...
Selecting previously deselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-3_sparc.deb) ...
Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_sparc.deb) ...
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_sparc.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.3_sparc.deb) ...
+Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.92_sparc.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
Selecting previously deselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_sparc.deb) ...
Setting up bsdmainutils (8.2.2) ...
@@ -251,35 +244,33 @@ update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write)
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-5) ...
Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.1-1) ...
+Setting up man-db (2.6.0.2-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5) ...
-Setting up file (5.04-5) ...
+Setting up libmagic1 (5.04-5+b1) ...
+Setting up file (5.04-5+b1) ...
Setting up gettext-base (0.18.1.1-3) ...
Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2) ...
-Setting up libdpkg-perl (1.16.0.1) ...
-Setting up dpkg-dev (1.16.0.1) ...
+Setting up libxml2 (2.7.8.dfsg-2+b1) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.4-1) ...
+Setting up libglib2.0-0 (2.28.6-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-3) ...
+Setting up libunistring0 (0.9.3-4) ...
Setting up gettext (0.18.1.1-3) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.3) ...
-Setting up cdbs (0.4.92) ...
+Setting up debhelper (8.1.6) ...
+Setting up cdbs (0.4.93) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 12 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-bpo.5-sparc64-smp sparc (sparc64)
-Toolchain package versions: binutils_2.21.0.20110327-2 dpkg-dev_1.16.0.1 g++-4.4_4.4.5-15 gcc-4.4_4.4.5-15 libc6-dev_2.11.2-11 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 linux-libc-dev_2.6.38-2
-Package versions: apt_0.8.13 base-files_6.1 base-passwd_3.5.22+b1 bash_4.1-3 binutils_2.21.0.20110327-2 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.92 coreutils_8.5-1 cpp_4:4.4.5-6 cpp-4.4_4.4.5-15 dash_0.5.5.1-7.4 debconf_1.5.38 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.3 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.15.8.10 dpkg-dev_1.16.0.1 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5 findutils_4.4.2-1+b2 g++_4:4.4.5-6 g++-4.4_4.4.5-15 gcc_4:4.4.5-6 gcc-4.4_4.4.5-15 gcc-4.4-base_4.4.5-15 gcc-4.6-base_4.6.0-2 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.1 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-11 libc-dev-bin_2.11.2-11 libc6_2.11.2-11 libc6-dev_2.11.2-11 libc6-dev-sparc64_2.11.2-11 libc6-sparc64_2.11.2-11 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-12 libdb4.8_4.8.30-4 libdpkg-perl_1.16.0.1 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-2 libgdbm3_1.8.3-9+b1 libglib2.0-0_2.28.4-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-2 liblzma2_5.0.0-2 libmagic1_5.04-5 libmpfr4_3.0.0-9 libncurses5_5.8+20110307-1 libpam-modules_1.1.2-2 libpam-runtime_1.1.2-2 libpam0g_1.1.2-2 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.1-3 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libss2_1.41.12-2 libstdc++6_4.6.0-2 libstdc++6-4.4-dev_4.4.5-15 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2 linux-libc-dev_2.6.38-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8 man-db_2.6.0.1-1 mawk_1.3.3-15+b1 mount_2.17.2-9.1 ncurses-base_5.8+20110307-1 ncurses-bin_5.8+20110307-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.10.1-19 perl-base_5.10.1-19 perl-modules_5.10.1-19 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.1 sysvinit_2.88dsf-13.1 sysvinit-utils_2.88dsf-13.1 tar_1.25-3 tzdata_2011e-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32-5-sparc64-smp sparc (sparc64)
+Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.4_4.4.6-3 gcc-4.4_4.4.6-3 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-3 linux-libc-dev_2.6.38-4
+Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22+b1 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.4.5-9 cpp-4.4_4.4.6-3 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b2 g++_4:4.4.5-9 g++-4.4_4.4.6-3 gcc_4:4.4.5-9 gcc-4.4_4.4.6-3 gcc-4.4-base_4.4.6-3 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libc6-dev-sparc64_2.13-2 libc6-sparc64_2.13-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9+b1 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libss2_1.41.12-4 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15+b1 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -289,14 +280,13 @@ Package versions: apt_0.8.13 base-files_6.1 base-passwd_3.5.22+b1 bash_4.1-3 bin
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Apr 12 08:22:29 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.4-1.dsc
-dpkg-source: info: extracting tabix in tabix-0.2.4
-dpkg-source: info: unpacking tabix_0.2.4.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.4-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
Check disc space
────────────────
@@ -305,61 +295,48 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.4-1
- dpkg-source --before-build tabix-0.2.4
+dpkg-buildpackage: source version 0.2.5-1
+ dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture sparc
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
dh_testroot
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
dh_clean
debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
mkdir -p "."
/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2" CXXFLAGS="-g -O2 -g -O2" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
-make[2]: Entering directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.4-1-sparc-uziF9b/tabix-0.2.4'
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
touch debian/stamp-makefile-build
DEB_MAKE_CHECK_TARGET unset, not running checks
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
test -x debian/rules
dh_testroot
dh_prep
@@ -383,6 +360,7 @@ dh_installcatalogs -ptabix
dh_installpam -ptabix
dh_installlogrotate -ptabix
dh_installlogcheck -ptabix
+dh_installgsettings -ptabix
dh_installchangelogs -ptabix ./ChangeLog
dh_installudev -ptabix
dh_lintian -ptabix
@@ -401,58 +379,57 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -ptabix
dh_md5sums -ptabix
dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.4-1_sparc.deb'.
- dpkg-genchanges -B -msparc Build Daemon (lebrun) <buildd_sparc-lebrun at buildd.debian.org> >../tabix_0.2.4-1_sparc.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_sparc.deb'.
+ dpkg-genchanges -B -msparc Build Daemon (spontini) <buildd_sparc-spontini at buildd.debian.org> >../tabix_0.2.5-1_sparc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build tabix-0.2.4
+ dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110412-0957
+Build finished at 20110510-1120
-tabix_0.2.4-1_sparc.changes:
+tabix_0.2.5-1_sparc.changes:
Format: 1.8
-Date: Tue, 12 Apr 2011 17:15:33 +0900
+Date: Tue, 10 May 2011 19:42:07 +0900
Source: tabix
Binary: tabix
Architecture: sparc
-Version: 0.2.4-1
+Version: 0.2.5-1
Distribution: sid
Urgency: low
-Maintainer: sparc Build Daemon (lebrun) <buildd_sparc-lebrun at buildd.debian.org>
+Maintainer: sparc Build Daemon (spontini) <buildd_sparc-spontini at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
Changes:
- tabix (0.2.4-1) unstable; urgency=low
+ tabix (0.2.5-1) unstable; urgency=low
.
* New upstream release.
- * Incremented Standards-Version to reflect conformance with Policy 3.9.2
- (debian/control).
+ * Added debian/README.test to explain how to test tabix and bgzip.
Checksums-Sha1:
- 3049b66438e66cf679d29aa3b5321bccb7aa76ea 56156 tabix_0.2.4-1_sparc.deb
+ 11e5f13ff588cc1aaecfd7c290852280972ab343 54960 tabix_0.2.5-1_sparc.deb
Checksums-Sha256:
- 93c3325294d301421fe4ed51dae2ad068754506d87c28843b0379647fb612216 56156 tabix_0.2.4-1_sparc.deb
+ 8841209c696c2842c8a50cfe603076c6ba6dbea1a43d365bebf5642f73e2403c 54960 tabix_0.2.5-1_sparc.deb
Files:
- d4f9687d9e73124ac15a844a2c13087d 56156 science optional tabix_0.2.4-1_sparc.deb
+ 5d4f1a2571d7baeeedf33fa4dc5c68a5 54960 science optional tabix_0.2.5-1_sparc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.4-1_sparc.deb
+tabix_0.2.5-1_sparc.deb
───────────────────────
new debian package, version 2.0.
- size 56156 bytes: control archive= 957 bytes.
+ size 54960 bytes: control archive= 993 bytes.
785 bytes, 16 lines control
- 587 bytes, 9 lines md5sums
+ 653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.4-1
+ Version: 0.2.5-1
Architecture: sparc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 160
+ Installed-Size: 168
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Section: science
Priority: optional
@@ -465,25 +442,26 @@ tabix_0.2.4-1_sparc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/bin/
--rwxr-xr-x root/root 62400 2011-04-12 09:56 ./usr/bin/tabix
--rwxr-xr-x root/root 22664 2011-04-12 09:56 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 1473 2011-04-12 07:17 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 262 2011-04-12 08:16 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-04-12 09:56 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-04-12 09:56 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2011-04-12 09:56 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2011-05-10 11:19 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/bin/
+-rwxr-xr-x root/root 22664 2011-05-10 11:19 ./usr/bin/bgzip
+-rwxr-xr-x root/root 65792 2011-05-10 11:19 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2011-05-10 11:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -497,7 +475,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-sparc-sbuild-812028c8-6a30-4b30-a3fe-cb6a39cc8d5e/build/buildd-tabix_0.2.4-1-sparc-uziF9b
+Purging /var/lib/schroot/mount/sid-sparc-sbuild-53c9c6b3-7b1d-4e8c-be29-e5d178f2df8a/build/buildd-tabix_0.2.5-1-sparc-iXzA_1
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -505,18 +483,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: sparc
-Build-Space: 1296
-Build-Time: 35
+Build-Space: 1340
+Build-Time: 90
Distribution: sid
-Install-Time: 76
-Job: tabix_0.2.4-1
+Install-Time: 74
+Job: tabix_0.2.5-1
Package: tabix
-Package-Time: 163
-Source-Version: 0.2.4-1
-Space: 1296
+Package-Time: 267
+Source-Version: 0.2.5-1
+Space: 1340
Status: successful
-Version: 0.2.4-1
+Version: 0.2.5-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110412-0957
-Build needed 00:02:43, 1296k disc space
-Signature with key '81587D01' requested:
+Finished at 20110510-1120
+Build needed 00:04:27, 1340k disc space
+Signature with key '3B3DF88C' requested:
--
Generic indexer for TAB-delimited genome position files.
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