[med-svn] [SCM] tabix branch, meta, updated. meta/0.2.3-1-7-g1794f4f
Charles Plessy
plessy at debian.org
Fri Jun 22 04:43:48 UTC 2012
The following commit has been merged in the meta branch:
commit 8d59907db924bfd0a46972cc06c1da601a5c84e9
Author: Charles Plessy <plessy at debian.org>
Date: Fri Jun 22 13:35:17 2012 +0900
tabix 0.2.5-2
diff --git a/armel.log b/armel.log
index 25813ad..7e2b66b 100644
--- a/armel.log
+++ b/armel.log
@@ -1,67 +1,69 @@
-From buildd at ancina.debian.org Tue May 10 11:18:09 2011
+From buildd at ancina.debian.org Wed Apr 25 21:22:54 2012
Return-path: <buildd at ancina.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ancina.debian.org>)
- id 1QJkx7-0006Uz-Ck
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:09 +0000
+ id 1SN9fq-0004Ob-2h
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:22:54 +0000
Received: from ancina.ugent.be ([157.193.39.13] helo=ancina.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=ancina.debian.org, EMAIL=hostmaster at ancina.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ancina.debian.org>)
- id 1QJkx6-00077m-Ab
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:08 +0000
-Received: from buildd by ancina.debian.org with local (Exim 4.69)
+ id 1SN9fp-0006h1-77
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:22:53 +0000
+Received: from buildd by ancina.debian.org with local (Exim 4.72)
(envelope-from <buildd at ancina.debian.org>)
- id 1QJkx0-0007hH-Ae; Tue, 10 May 2011 11:18:02 +0000
+ id 1SN9fo-0001dx-Ld; Wed, 25 Apr 2012 21:22:52 +0000
+Message-Id: <E1SN9fo-0001dx-Ld at ancina.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 10 May 2011 11:18:02 +0000
-From: Build Daemon <buildd at ancina.debian.org>
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Wed, 25 Apr 2012 21:22:52 +0000
+From: buildd on ancina <buildd at ancina.debian.org>
To: buildd-porters at ancina.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on armel (dist=sid)
-Key-Id: A1EAA0BB
-Message-Id: <E1QJkx0-0007hH-Ae at ancina.debian.org>
+Subject: Log for successful build of tabix_0.2.5-2 on armel (dist=sid)
+Key-Id: DD902B75
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ancina.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (armel) 10 May 2011 11:15 ║
+║ tabix 0.2.5-2 (armel) 25 Apr 2012 21:20 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: armel
Hit http://ftp.de.debian.org sid InRelease
+Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Get:1 http://incoming.debian.org Release.gpg [836 B]
-Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
-Get:2 http://incoming.debian.org Release [1604 B]
Hit http://ftp.de.debian.org sid/contrib Sources/DiffIndex
Hit http://ftp.de.debian.org sid/main armel Packages/DiffIndex
Hit http://ftp.de.debian.org sid/contrib armel Packages/DiffIndex
Ign http://ftp.de.debian.org sid/contrib TranslationIndex
Hit http://ftp.de.debian.org sid/main TranslationIndex
+Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://ftp.de.debian.org sid/contrib Translation-en
+Hit http://ftp.de.debian.org sid/main Translation-en
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/main armel Packages/DiffIndex
Hit http://incoming.debian.org sid/contrib armel Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
-Ign http://ftp.de.debian.org sid/contrib Translation-en
-Get:3 http://incoming.debian.org Sources [27.9 kB]
-Get:4 http://incoming.debian.org Packages [545 kB]
+Get:2 http://incoming.debian.org Release [1601 B]
+Hit http://incoming.debian.org sid/contrib Translation-en
+Hit http://incoming.debian.org sid/main Translation-en
+Get:3 http://incoming.debian.org Sources [31.9 kB]
+Get:4 http://incoming.debian.org Packages [519 kB]
Ign http://incoming.debian.org Translation-en
-Ign http://incoming.debian.org sid/contrib Translation-en
-Fetched 575 kB in 11s (51.2 kB/s)
+Fetched 553 kB in 10s (55.1 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -82,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (95.2 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (96.5 kB/s)
Download complete and in download only mode
Check arch
@@ -100,145 +102,168 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 libssl0.9.8 man-db
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 libssl0.9.8 man-db
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.2)
-e2fsprogs: already installed (1.41.12-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
-cdbs: missing
-debhelper: missing
-Using default version 8.1.6
-zlib1g-dev: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+debhelper: already installed (9.20120410 >= 9 is satisfied)
+zlib1g-dev: already installed (1:1.2.6.dfsg-2)
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
+The following packages were automatically installed and are no longer required:
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-The following extra packages will be installed:
- file gettext gettext-base html2text intltool-debian libcroco3 libglib2.0-0
- libmagic1 libunistring0 libxml2 po-debconf
-Suggested packages:
- devscripts dh-make gettext-doc libmail-box-perl
-Recommended packages:
- autotools-dev autopoint libglib2.0-data shared-mime-info xml-core
- libmail-sendmail-perl
-The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base html2text intltool-debian libcroco3
- libglib2.0-0 libmagic1 libunistring0 libxml2 po-debconf zlib1g-dev
-debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 14 newly installed, 0 to remove and 9 not upgraded.
-Need to get 0 B/6445 kB of archives.
-After this operation, 19.8 MB of additional disk space will be used.
-Selecting previously deselected package libmagic1.
-(Reading database ... 11631 files and directories currently installed.)
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_armel.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_armel.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_armel.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_armel.deb) ...
-Selecting previously deselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_armel.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_armel.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_armel.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_armel.deb) ...
-Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_armel.deb) ...
-Processing triggers for man-db ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
-Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
+The following packages were automatically installed and are no longer required:
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.31-rc9 armel (armv5tel)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.2 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 libc6-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 linux-libc-dev_2.6.38-3
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dmsetup_2:1.02.63-3 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gawk_1:3.1.7.dfsg-5 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdevmapper1.02.1_2:1.02.63-3 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libgpm2_1.20.4-3.4 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-2 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libsasl2-2_2.1.23.dfsg1-8 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libssl0.9.8_0.9.8o-7 libssl1.0.0_1.0.0d-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libudev0_168-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libvolume-id1_0.141-2 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 netbase_4.45 nullmailer_1:1.05-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 wget_1.12-3.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32 armel (armv5tel)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.4_4.4.7-1 g++-4.6_4.6.3-3 gcc-4.4_4.4.7-1 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.4-dev_4.4.7-1 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.14-1
+Package versions: adduser_3.113+nmu1 apex-nslu2_1.6.10 apt_0.8.15.10 apt-utils_0.8.15.10 aspell_0.60.7~20110707-1 aspell-en_7.1-0-1 autoconf_2.68-1 automake_1:1.11.4-1 autopoint_0.18.1.1-5 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 bc_1.06.95-2 bf-utf-source_0.05-0.1 binfmt-support_2.0.8 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 ca-certificates_20120212 ca-certificates-java_20120225 camlidl_1.05-14 cdbs_0.4.111 cmake_2.8.7-4 cmake-data_2.8.7-4 coreutils_8.13-3.1 cpio_2.11-7 cpp_4:4.6.3-4 cpp-4.4_4.4.7-1 cpp-4.6_4.6.3-3 dash_0.5.7-3 dctrl-tools_2.21.1 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debiandoc-sgml_1.2.26 debianutils_4.3 default-jre-headless_1:1.6-47 devio_1.2-1+b1 dh-autoreconf_6 dh-buildinfo_0.9 dictionaries-common_1.12.5 diffstat_1.55-2 diffutils_1:3.2-2 dmsetup_2:1.02.67-2 dns323-firmware-tools_0.3-2 docbook-xml_4.5-7 docbook-xsl_1.76.1+dfsg-1 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libio-socket-ssl-perl_1.62-1 libiso9660-7_0.81-5 libiso9660-dev_0.81-5 libjack-dev_1:0.121.3+20120418git75e3e20b-1 libjack0_1:0.121.3+20120418git75e3e20b-1 libjasper1_1.900.1-13 libjpeg8_8d-1 libjpeg8-dev_8d-1 libjson0_0.9-1 libk5crypto3_1.10+dfsg~beta1-2 libkate-dev_0.4.1-1 libkate1_0.4.1-1 libkeyutils1_1.5.5-1 libkmod2_6-2 libkrb5-3_1.10+dfsg~beta1-2 libkrb5support0_1.10+dfsg~beta1-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblcms1_1.19.dfsg-1+b2 libldap-2.4-2_2.4.28-1.1 liblircclient-dev_0.9.0~pre1-1 liblircclient0_0.9.0~pre1-1 liblivemedia-dev_2012.02.29-2 libllvm3.0_3.0-9 libltdl-dev_2.4.2-1 libltdl7_2.4.2-1 liblua5.1-0_5.1.5-1 liblua5.1-0-dev_5.1.5-1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.03-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmad0_0.15.1b-7 libmad0-dev_0.15.1b-7 libmagic1_5.11-1 libmatroska-dev_1.3.0-2 libmatroska5_1.3.0-2 libmng1_1.0.10-3 libmodplug-dev_1:0.8.8.4-3 libmodplug1_1:0.8.8.4-3 libmount1_2.20.1-4 libmp3lame0_3.99.5+repack1-3 libmpc2_0.9-4 libmpcdec-dev_2:0.1~r459-2 libmpcdec6_2:0.1~r459-2 libmpeg2-4_0.4.1-3 libmpeg2-4-dev_0.4.1-3 libmpfr4_3.1.0-4 libmtp-common_1.1.3-1 libmtp-dev_1.1.3-1 libmtp9_1.1.3-1 libncurses5_5.9-6 libncurses5-dev_5.9-6 libncursesw5_5.9-6 libncursesw5-dev_5.9-6 libnet-http-perl_6.03-1 libnet-ssleay-perl_1.45-2 libnettle4_2.4-1 libnewt-dev_0.52.14-8 libnewt-pic_0.52.14-8 libnewt0.52_0.52.14-8 libnspr4-0d_4.9-1 libnss3-1d_3.13.3-1 liboctave1_3.6.1-4 libogg-dev_1.2.2~dfsg-1 libogg0_1.2.2~dfsg-1 libopenjpeg2_1.3+dfsg-4+b1 libopenmpi1.3_1.4.3-2.1 liborc-0.4-0_1:0.4.16-1 liborc-0.4-dev_1:0.4.16-1 libp11-kit-dev_0.12-2 libp11-kit0_0.12-2 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpango1.0-dev_1.30.0-1 libparpack2_3.1.0-2 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpcsclite1_1.8.3-2 libphobos-4.4-dev_1.063-4.4.7-1 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpixman-1-dev_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libpopt0_1.16-3 libpostproc-dev_5:0.8.1-4 libpostproc52_5:0.8.1-4 libprocps0_1:3.3.2-3 libproxy-dev_0.3.1-4+b3 libproxy0_0.3.1-4+b3 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libpulse0_1.1-3+b1 libpython2.6_2.6.7-4 libpython2.7_2.7.3~rc2-2 libqhull-dev_2009.1-3 libqhull5_2009.1-3 libqrupdate1_1.1.1-1 libqt4-dbus_4:4.7.4-3 libqt4-network_4:4.7.4-3 libqt4-script_4:4.7.4-3 libqt4-sql_4:4.7.4-3 libqt4-test_4:4.7.4-3 libqt4-xml_4:4.7.4-3 libqt4-xmlpatterns_4:4.7.4-3 libqtcore4_4:4.7.4-3 libraw1394-11_2.0.8-1 libraw1394-dev_2.0.8-1 libreadline-dev_6.2-8 libreadline5_5.2-11 libreadline6_6.2-8 libreadline6-dev_6.2-8 libresid-builder-dev_2.1.1-13 libresid-builder0c2a_2.1.1-13 libroman-perl_1.23-1 librtmp0_2.4+20111222.git4e06e21-1 libruby1.8_1.8.7.358-2 libsamplerate0_0.1.8-4 libsamplerate0-dev_0.1.8-4 libsasl2-2_2.1.25.dfsg1-4 libschroedinger-1.0-0_1.0.11-1 libschroedinger-dev_1.0.11-1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libsgmls-perl_1.03ii-32 libshout3_2.2.2-8 libshout3-dev_2.2.2-8 libsidplay2_2.1.1-13 libsidplay2-dev_2.1.1-13 libsigsegv2_2.9-4 libslang2_2.2.4-8 libslang2-dev_2.2.4-8 libslang2-pic_2.2.4-8 libsm-dev_2:1.2.1-2 libsm6_2:1.2.1-2 libsmbclient_2:3.6.3-2 libsmbclient-dev_2:3.6.3-2 libsndfile1_1.0.25-4 libsp1c2_1.3.4-1.2.1-47.1 libspeex-dev_1.2~rc1-3 libspeex1_1.2~rc1-3 libspeexdsp-dev_1.2~rc1-3 libspeexdsp1_1.2~rc1-3 libsqlite3-0_3.7.11-2 libss2_1.42.2-2 libssh2-1_1.4.1-1 libssl-dev_1.0.1-4 libssl1.0.0_1.0.1-4 libstdc++6_4.7.0-3 libstdc++6-4.4-dev_4.4.7-1 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libswscale-dev_5:0.8.1-4 libswscale2_5:0.8.1-4 libtag1-dev_1.7-2 libtag1-vanilla_1.7-2 libtag1c2a_1.7-2 libtalloc2_2.0.7+git20120207-1 libtar-dev_1.2.11-8 libtar0_1.2.11-8 libtasn1-3_2.12-1 libtasn1-3-dev_2.12-1 libtdb1_1.2.10-1 libtext-format-perl_0.53-1 libtext-iconv-perl_1.7-5 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtheora-dev_1.1.1+dfsg.1-3 libtheora0_1.1.1+dfsg.1-3 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libtool_2.4.2-1 libtorque2_2.4.16+dfsg-1 libtwolame-dev_0.3.13-1 libtwolame0_0.3.13-1 libudev-dev_175-3.1 libudev0_175-3.1 libumfpack5.4.0_1:3.4.0-2 libunistring0_0.9.3-5 libupnp-dev_1:1.6.6-5.1 libupnp3_1:1.6.6-5.1 libupnp3-dev_1:1.6.6-5.1 liburi-perl_1.60-1 libusb-0.1-4_2:0.1.12-21 libusb-1.0-0_2:1.0.9~rc3-4 libusb-1.0-0-dev_2:1.0.9~rc3-4 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libv4l-0_0.8.7-1 libv4l-dev_0.8.7-1 libv4lconvert0_0.8.7-1 libva-dev_1.0.15-4 libva-egl1_1.0.15-4 libva-glx1_1.0.15-4 libva-tpi1_1.0.15-4 libva-x11-1_1.0.15-4 libva1_1.0.15-4 libvcdinfo-dev_0.7.24-1 libvcdinfo0_0.7.24-1 libvolume-id1_0.141-2 libvorbis-dev_1.3.2-1.1 libvorbis0a_1.3.2-1.1 libvorbisenc2_1.3.2-1.1 libvorbisfile3_1.3.2-1.1 libvpx1_1.0.0-2 libwbclient0_2:3.6.3-2 libwrap0_7.6.q-23 libwww-perl_6.04-1 libwww-robotrules-perl_6.01-1 libwxbase2.8-0_2.8.12.1-7 libwxbase2.8-dev_2.8.12.1-7 libx11-6_2:1.4.99.901-1 libx11-data_2:1.4.4-4 libx11-dev_2:1.4.99.901-1 libx11-xcb-dev_2:1.4.4-4 libx11-xcb1_2:1.4.4-4 libx264-120_2:0.120.2171+git01f7a33-3 libx264-dev_2:0.120.2171+git01f7a33-3 libxau-dev_1:1.0.7-1 libxau6_1:1.0.7-1 libxcb-composite0_1.8.1-1 libxcb-composite0-dev_1.8.1-1 libxcb-keysyms1_0.3.8-1 libxcb-keysyms1-dev_0.3.8-1 libxcb-randr0_1.8.1-1 libxcb-randr0-dev_1.8.1-1 libxcb-render0_1.8.1-1 libxcb-render0-dev_1.8.1-1 libxcb-shape0_1.8.1-1 libxcb-shape0-dev_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb-shm0-dev_1.8.1-1 libxcb-xfixes0_1.8.1-1 libxcb-xfixes0-dev_1.8.1-1 libxcb-xv0_1.8.1-1 libxcb-xv0-dev_1.8.1-1 libxcb1_1.8.1-1 libxcb1-dev_1.8.1-1 libxcomposite-dev_1:0.4.3-2 libxcomposite1_1:0.4.3-2 libxcursor-dev_1:1.1.12-1 libxcursor1_1:1.1.12-1 libxdamage-dev_1:1.1.3-2 libxdamage1_1:1.1.3-2 libxdmcp-dev_1:1.1.0-4 libxdmcp6_1:1.1.0-4 libxext-dev_2:1.3.0-3 libxext6_2:1.3.0-3 libxfixes-dev_1:5.0-4 libxfixes3_1:5.0-4 libxft-dev_2.2.0-3 libxft2_2.2.0-3 libxi-dev_2:1.4.5-1.1 libxi6_2:1.4.5-1.1 libxinerama-dev_2:1.1.1-3 libxinerama1_2:1.1.1-3 libxml-dom-perl_1.44-1 libxml-parser-perl_2.41-1+b1 libxml-perl_0.08-2 libxml-regexp-perl_0.04-1 libxml2_2.7.8.dfsg-7 libxml2-dev_2.7.8.dfsg-7 libxml2-utils_2.7.8.dfsg-7 libxmlrpc-core-c3_1.16.33-3.1 libxpm-dev_1:3.5.9-4 libxpm4_1:3.5.9-4 libxrandr-dev_2:1.3.2-2 libxrandr2_2:1.3.2-2 libxrender-dev_1:0.9.6-2 libxrender1_1:0.9.6-2 libxslt1.1_1.1.26-8 libxss-dev_1:1.2.1-2 libxss1_1:1.2.1-2 libxt-dev_1:1.1.1-2 libxt6_1:1.1.1-2 libxtst6_2:1.2.1-1 libxvidcore4_2:1.3.2-9 libxxf86dga-dev_2:1.1.2-1 libxxf86dga1_2:1.1.2-1 libxxf86vm-dev_1:1.1.1-2 libxxf86vm1_1:1.1.1-2 libzvbi-common_0.2.33-5 libzvbi-dev_0.2.33-5 libzvbi0_0.2.33-5 linux-libc-dev_3.2.14-1 llvm-3.0_3.0-9 llvm-3.0-runtime_3.0-9 login_1:4.1.5-1 lsb-base_4.1+Debian0 lua5.1_5.1.5-1 m4_1.4.16-2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mesa-common-dev_7.11.2-1 mime-support_3.52-1 mklibs_0.1.33 mklibs-copy_0.1.33 module-init-tools_6-2 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 netbase_4.47 nullmailer_1:1.05-1 ocaml-base-nox_3.12.1-2 ocaml-findlib_1.2.8+debian-1 ocaml-interp_3.12.1-2 ocaml-nox_3.12.1-2 octave-common_3.6.1-4 openjdk-6-jre-headless_6b24-1.11.1-5 openjdk-6-jre-lib_6b24-1.11.1-5 openssl_1.0.1-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 python_2.7.2-10 python-all_2.7.2-10 python-all-dev_2.7.2-10 python-cairo_1.8.8-1+b2 python-dev_2.7.2-10 python-gobject-2_2.28.6-10 python-gobject-2-dev_2.28.6-10 python-minimal_2.7.2-10 python-numpy_1:1.6.1-8 python-qt4-dev_4.9.1-1 python-sip_4.13.2-1 python-sip-dev_4.13.2-1 python-support_1.0.14 python2.6_2.6.7-4 python2.6-dev_2.6.7-4 python2.6-minimal_2.6.7-4 python2.7_2.7.3~rc2-2 python2.7-dev_2.7.3~rc2-2 python2.7-minimal_2.7.3~rc2-2 qdbus_4:4.7.4-3 qt4-linguist-tools_4:4.7.4-3 qt4-qmake_4:4.7.4-3 quilt_0.60-2 readline-common_6.2-8 ruby1.8_1.8.7.358-2 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 sgml-data_2.0.6 sgmlspl_1.03ii-32 shared-mime-info_0.90-1 slice_1.3.8-11 slugimage_1:0.0+r104-5 sp_1.3.4-1.2.1-47.1 sudo_1.8.3p2-1 swig_2.0.4-5 swig2.0_2.0.4-5 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tcl8.5-dev_8.5.11-1 texinfo_4.13a.dfsg.1-9 tk8.5_8.5.11-1 tk8.5-dev_8.5.11-1 ttf-dejavu-core_2.33-2 ttf-freefont_20100919-1 tzdata_2012b-1 tzdata-java_2012b-1 u-boot-tools_2011.12-3 ucf_3.0025+nmu2 util-linux_2.20.1-4 wget_1.13.4-3 wx-common_2.8.12.1-7 wx2.8-headers_2.8.12.1-7 x11-common_1:7.6+12 x11proto-composite-dev_1:0.4.2-2 x11proto-core-dev_7.0.22-1 x11proto-damage-dev_1:1.2.1-2 x11proto-fixes-dev_1:5.0-2 x11proto-input-dev_2.2-1 x11proto-kb-dev_1.0.5-2 x11proto-randr-dev_1.3.2-2 x11proto-render-dev_2:0.11.1-2 x11proto-scrnsaver-dev_1.2.1-2 x11proto-xext-dev_7.2.0-3 x11proto-xf86dga-dev_2.1-3 x11proto-xf86vidmode-dev_2.3.1-2 x11proto-xinerama-dev_1.2.1-2 xml-core_0.13 xorg-sgml-doctools_1:1.10-1 xsltproc_1.1.26-8 xtrans-dev_1.2.6-2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -248,14 +273,15 @@ Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -264,157 +290,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture armel
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-dh_clean
- debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-armel-x2P61d/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_armel.deb'.
- dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../tabix_0.2.5-1_armel.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_armel.deb'.
+ dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../tabix_0.2.5-2_armel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1117
+Build finished at 20120425-2122
-tabix_0.2.5-1_armel.changes:
+tabix_0.2.5-2_armel.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: armel
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: armel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- c6e87af1cf3100af5cda3db32967076054cace29 54600 tabix_0.2.5-1_armel.deb
+ d991405695a4311487711023304d0ec1307bd632 56490 tabix_0.2.5-2_armel.deb
Checksums-Sha256:
- d80c969249c04e2a8b5e1e7555a77f2ea5a749f7f35b5546b5983195bed86d75 54600 tabix_0.2.5-1_armel.deb
+ 9597faf8a03b46a08497d9a4e4c168312c2e02f02baecba80d9c22ef4663f063 56490 tabix_0.2.5-2_armel.deb
Files:
- 0e46b33d1ef6380e244791ddaa9806cf 54600 science optional tabix_0.2.5-1_armel.deb
+ 46439fa4b8a59837caf496befec6b49c 56490 science optional tabix_0.2.5-2_armel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_armel.deb
+tabix_0.2.5-2_armel.deb
───────────────────────
new debian package, version 2.0.
- size 54600 bytes: control archive= 992 bytes.
- 785 bytes, 16 lines control
+ size 56490 bytes: control archive= 992 bytes.
+ 780 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 160
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 141
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -426,26 +461,26 @@ tabix_0.2.5-1_armel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 23588 2011-05-10 11:17 ./usr/bin/bgzip
--rwxr-xr-x root/root 60240 2011-05-10 11:17 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/bin/
+-rwxr-xr-x root/root 24904 2012-04-25 21:22 ./usr/bin/bgzip
+-rwxr-xr-x root/root 62732 2012-04-25 21:22 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:22 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+lrwxrwxrwx root/root 0 2012-04-25 21:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -459,66 +494,81 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armel-sbuild-1f46d419-2c6c-4021-99fa-d28afdff2ffd/build/buildd-tabix_0.2.5-1-armel-x2P61d
+Purging /var/lib/schroot/mount/sid-armel-sbuild-b4e296d2-4ef9-4c15-83da-d062da4fd409/build/buildd-tabix_0.2.5-2-armel-WT2F5I
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libssl0.9.8
+The following packages were automatically installed and are no longer required:
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 libssl0.9.8 man-db
+ aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
+ libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
+ libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
+ libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
+ libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
+ libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
+ libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
+ libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
+ libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
+ libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
+ libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
+ x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
+ dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
+ libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
+ libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
+ libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
+ libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
+ libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
+ default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
+ qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
+ wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
+ libmng1 python-cairo libenchant-dev octave-common
Use 'apt-get autoremove' to remove them.
-The following packages will be REMOVED:
- cdbs* debhelper* file* gettext* gettext-base* html2text* intltool-debian*
- libcroco3* libglib2.0-0* libmagic1* libunistring0* libxml2* po-debconf*
- zlib1g-dev*
-0 upgraded, 0 newly installed, 14 to remove and 9 not upgraded.
-After this operation, 19.8 MB disk space will be freed.
-(Reading database ... 12506 files and directories currently installed.)
-Removing cdbs ...
-Removing debhelper ...
-Removing file ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing gettext-base ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing zlib1g-dev ...
-Processing triggers for man-db ...
+0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armel
-Build-Space: 1356
-Build-Time: 74
+Build-Space: 1460
+Build-Time: 68
Distribution: sid
-Install-Time: 26
-Job: tabix_0.2.5-1
+Install-Time: 20
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 133
-Source-Version: 0.2.5-1
-Space: 1356
+Package-Time: 129
+Source-Version: 0.2.5-2
+Space: 1460
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1117
-Build needed 00:02:13, 1356k disc space
-Signature with key 'A1EAA0BB' requested:
+Finished at 20120425-2122
+Build needed 00:02:09, 1460k disc space
+Signature with key 'DD902B75' requested:
diff --git a/armhf.log b/armhf.log
new file mode 100644
index 0000000..4be41a4
--- /dev/null
+++ b/armhf.log
@@ -0,0 +1,497 @@
+From buildd at howells.debian.org Wed Apr 25 21:19:33 2012
+Return-path: <buildd at howells.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at howells.debian.org>)
+ id 1SN9cb-0003rG-LJ
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:33 +0000
+Received: from howells.ynic.york.ac.uk ([144.32.168.75]
+ helo=howells.debian.org)
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=howells.debian.org, EMAIL=hostmaster at howells.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at howells.debian.org>)
+ id 1SN9ca-0006SL-Lo
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:32 +0000
+Received: from buildd by howells.debian.org with local (Exim 4.77)
+ (envelope-from <buildd at howells.debian.org>)
+ id 1SN9cZ-00055f-KI; Wed, 25 Apr 2012 21:19:31 +0000
+From: buildd on howells <buildd at howells.debian.org>
+To: logs at buildd.debian.org,buildd-porters at howells.debian.org
+Subject: Log for successful build of tabix_0.2.5-2 on armhf (dist=sid)
+Content-Type: text/plain; charset=UTF-8
+Content-Transfer-Encoding: 8bit
+Message-Id: <E1SN9cZ-00055f-KI at howells.debian.org>
+Date: Wed, 25 Apr 2012 21:19:31 +0000
+Delivered-To: logs at buildd.debian.org
+
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on howells.debian.org
+
+╔══════════════════════════════════════════════════════════════════════════════╗
+║ tabix 0.2.5-2 (armhf) 25 Apr 2012 21:14 ║
+╚══════════════════════════════════════════════════════════════════════════════╝
+
+Package: tabix
+Version: 0.2.5-2
+Source Version: 0.2.5-2
+Architecture: armhf
+Get:1 http://ftp.uk.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6244 kB]
+Ign http://incoming.debian.org InRelease
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [53.9 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
+Get:8 http://ftp.uk.debian.org unstable/main armhf Packages [5724 kB]
+Get:9 http://ftp.uk.debian.org unstable/contrib armhf Packages [35.5 kB]
+Get:10 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:11 http://ftp.uk.debian.org unstable/main Translation-en [3943 kB]
+Get:12 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:13 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:14 http://incoming.debian.org unstable/main armhf Packages [5725 kB]
+Get:15 http://incoming.debian.org unstable/contrib armhf Packages [35.5 kB]
+Get:16 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:17 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org Sources [33.5 kB]
+Get:20 http://incoming.debian.org Packages [517 kB]
+Ign http://incoming.debian.org Translation-en
+Fetched 33.2 MB in 1min 51s (299 kB/s)
+Reading package lists...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Fetch source files │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Check APT
+─────────
+
+Checking available source versions...
+
+Download source files with APT
+──────────────────────────────
+
+Reading package lists...
+Building dependency tree...
+Reading state information...
+NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
+git://git.debian.org/debian-med/tabix.git
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (98.8 kB/s)
+Download complete and in download only mode
+
+Check arch
+──────────
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install core build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5+b1)
+fakeroot: already installed (1.18.2-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
+Checking for already installed dependencies...
+libc6-dev: already installed (2.13-28)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+debhelper: missing
+Using default version 9.20120419
+zlib1g-dev: missing
+Checking for dependency conflicts...
+Installing positive dependencies: debhelper zlib1g-dev
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following extra packages will be installed:
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
+Suggested packages:
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
+Recommended packages:
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
+The following NEW packages will be installed:
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 10 not upgraded.
+Need to get 9329 kB of archives.
+After this operation, 22.8 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.1-1 [33.2 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 5.11-1 [247 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 1:8.30-4 [241 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.7.8.dfsg-9 [779 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armhf 3.0.10-3+b1 [22.3 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.32.0-4 [1872 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.5-1 [134 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.1 [203 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.21-7 [1027 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.1-2 [1012 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main file armhf 5.11-1 [52.8 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-5+b1 [132 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-5+b1 [1920 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.6.dfsg-2 [206 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 9329 kB in 4s (2062 kB/s)
+Selecting previously unselected package libpipeline1:armhf.
+(Reading database ... 10778 files and directories currently installed.)
+Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ...
+Selecting previously unselected package libmagic1:armhf.
+Unpacking libmagic1:armhf (from .../libmagic1_5.11-1_armhf.deb) ...
+Selecting previously unselected package libpcre3:armhf.
+Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-4_armhf.deb) ...
+Selecting previously unselected package libxml2:armhf.
+Unpacking libxml2:armhf (from .../libxml2_2.7.8.dfsg-9_armhf.deb) ...
+Selecting previously unselected package libffi5:armhf.
+Unpacking libffi5:armhf (from .../libffi5_3.0.10-3+b1_armhf.deb) ...
+Selecting previously unselected package libglib2.0-0:armhf.
+Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.32.0-4_armhf.deb) ...
+Selecting previously unselected package libcroco3:armhf.
+Unpacking libcroco3:armhf (from .../libcroco3_0.6.5-1_armhf.deb) ...
+Selecting previously unselected package libunistring0:armhf.
+Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_armhf.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_armhf.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_armhf.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_armhf.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_armhf.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15+b1_armhf.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5+b1_armhf.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:armhf.
+Unpacking zlib1g-dev:armhf (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_armhf.deb) ...
+Setting up libpipeline1:armhf (1.2.1-1) ...
+Setting up libmagic1:armhf (5.11-1) ...
+Setting up libpcre3:armhf (1:8.30-4) ...
+Setting up libxml2:armhf (2.7.8.dfsg-9) ...
+Setting up libffi5:armhf (3.0.10-3+b1) ...
+Setting up libglib2.0-0:armhf (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:armhf (0.6.5-1) ...
+Setting up libunistring0:armhf (0.9.3-5+b1) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
+Building database of manual pages ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up html2text (1.3.2a-15+b1) ...
+Setting up gettext (0.18.1.1-5+b1) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:armhf (1:1.2.6.dfsg-2) ...
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+Checking correctness of dependencies...
+Kernel: Linux 3.2.0-2-mx5 armhf (armv7l)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6-dev_2.13-28 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.15-1
+Package versions: apt_0.9.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-28 libc-dev-bin_2.13-28 libc6_2.13-28 libc6-dev_2.13-28 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblocale-gettext-perl_1.05-7+b3 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-28 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Unpack source
+─────────────
+
+gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Can't check signature: public key not found
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
+
+Check disc space
+────────────────
+
+
+dpkg-buildpackage
+─────────────────
+
+dpkg-buildpackage: source package tabix
+dpkg-buildpackage: source version 0.2.5-2
+ dpkg-source --before-build tabix-0.2.5
+dpkg-buildpackage: host architecture armhf
+ fakeroot debian/rules clean
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+ dh_auto_test -a
+ fakeroot debian/rules binary-arch
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_armhf.deb'.
+ dpkg-genchanges -B -marmhf Build Daemon (howells) <buildd_armhf-howells at buildd.debian.org> >../tabix_0.2.5-2_armhf.changes
+dpkg-genchanges: arch-specific upload - not including arch-independent packages
+dpkg-genchanges: binary-only upload - not including any source code
+ dpkg-source --after-build tabix-0.2.5
+dpkg-buildpackage: binary only upload (no source included)
+────────────────────────────────────────────────────────────────────────────────
+Build finished at 20120425-2119
+
+tabix_0.2.5-2_armhf.changes:
+Format: 1.8
+Date: Wed, 25 Apr 2012 17:02:10 +0200
+Source: tabix
+Binary: tabix
+Architecture: armhf
+Version: 0.2.5-2
+Distribution: sid
+Urgency: low
+Maintainer: armhf Build Daemon (howells) <buildd_armhf-howells at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
+Description:
+ tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
+Changes:
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
+Checksums-Sha1:
+ f11277240109b77086b018a6df933810a1b13bf2 54002 tabix_0.2.5-2_armhf.deb
+Checksums-Sha256:
+ 9d2d462ef3198be4cfc4af742b0756f874ede03e144278ea0c8345a22ff73403 54002 tabix_0.2.5-2_armhf.deb
+Files:
+ 941af7bd9ed657eb0cacaed6bf40ae49 54002 science optional tabix_0.2.5-2_armhf.deb
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Package contents │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+tabix_0.2.5-2_armhf.deb
+───────────────────────
+
+ new debian package, version 2.0.
+ size 54002 bytes: control archive= 997 bytes.
+ 784 bytes, 16 lines control
+ 653 bytes, 10 lines md5sums
+ Package: tabix
+ Version: 0.2.5-2
+ Architecture: armhf
+ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+ Installed-Size: 118
+ Depends: libc6 (>= 2.13-28), zlib1g (>= 1:1.2.3.3)
+ Section: science
+ Priority: optional
+ Homepage: http://samtools.sourceforge.net/tabix.shtml
+ Description: generic indexer for TAB-delimited genome position files
+ Tabix indexes files where some columns indicate sequence coordinates: name
+ (usually a chromosme), start and stop. The input data file must be position
+ sorted and compressed by bgzip (provided in this package), which has a gzip
+ like interface. After indexing, tabix is able to quickly retrieve data lines by
+ chromosomal coordinates. Fast data retrieval also works over network if an URI
+ is given as a file name.
+
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/bin/
+-rwxr-xr-x root/root 46092 2012-04-25 21:19 ./usr/bin/tabix
+-rwxr-xr-x root/root 18688 2012-04-25 21:19 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:19 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+lrwxrwxrwx root/root 0 2012-04-25 21:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Finished │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Built successfully
+────────────────────────────────────────────────────────────────────────────────
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /var/lib/schroot/mount/sid-armhf-sbuild-ea67993f-f14f-49dc-98c2-d3f01095484c/build/buildd-tabix_0.2.5-2-armhf-XRKX_h
+Not cleaning session: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: armhf
+Build-Space: 1396
+Build-Time: 70
+Distribution: sid
+Install-Time: 86
+Job: tabix_0.2.5-2
+Package: tabix
+Package-Time: 302
+Source-Version: 0.2.5-2
+Space: 1396
+Status: successful
+Version: 0.2.5-2
+────────────────────────────────────────────────────────────────────────────────
+Finished at 20120425-2119
+Build needed 00:05:02, 1396k disc space
+Signature with key 'DB148B42' requested:
+
diff --git a/hurd-i386.log b/hurd-i386.log
index 27a0e91..8f7deda 100644
--- a/hurd-i386.log
+++ b/hurd-i386.log
@@ -1,73 +1,63 @@
-From buildd at bach.debian.net Tue May 10 11:27:03 2011
-Return-path: <buildd at bach.debian.net>
+From buildd at mozart.debian.net Wed Apr 25 21:23:36 2012
+Return-path: <buildd at mozart.debian.net>
Received: from callisto.debian.net ([80.87.129.151])
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at bach.debian.net>)
- id 1QJl5i-0008Su-Iz
- for logs at buildd.debian.org; Tue, 10 May 2011 11:27:03 +0000
-Received: from bach.debian.net ([10.3.0.1])
- by callisto.debian.net with esmtp (Exim 4.69)
- (envelope-from <buildd at bach.debian.net>)
- id 1QJl5g-0007Uc-G6; Tue, 10 May 2011 12:27:00 +0100
-Received: from buildd by bach.debian.net with local (Exim 4.72)
- (envelope-from <buildd at bach.debian.net>)
- id 1QJl5k-0001bI-AD; Tue, 10 May 2011 11:27:04 +0000
-Date: Tue, 10 May 2011 11:27:04 +0000
-Message-Id: <E1QJl5k-0001bI-AD at bach.debian.net>
-From: Build Daemon <buildd at bach.debian.net>
-To: samuel.thibault at labri.fr, mbanck at gmx.net, logs at buildd.debian-ports.org,
- logs at buildd.debian.org, debian-hurd-build-logs at lists.alioth.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on hurd-i386 (dist=sid)
+ (Exim 4.72) (envelope-from <buildd at mozart.debian.net>)
+ id 1SN9gU-0004Qy-Kv
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:23:35 +0000
+Received: from mozart.debian.net ([10.1.0.1])
+ by callisto.debian.net with esmtp (Exim 4.72)
+ (envelope-from <buildd at mozart.debian.net>)
+ id 1SN9gQ-0001sd-JQ; Wed, 25 Apr 2012 22:23:30 +0100
+Received: from buildd by mozart.debian.net with local (Exim 4.76)
+ (envelope-from <buildd at mozart.debian.net>)
+ id 1SN9gR-0006Qf-TL; Wed, 25 Apr 2012 21:23:31 +0000
+From: Build Daemon <buildd at mozart.debian.net>
+To: samuel.thibault at ens-lyon.org, mbanck at gmx.net, logs at buildd.debian-ports.org,
+ logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-2 on hurd-i386 (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
+Message-Id: <E1SN9gR-0006Qf-TL at mozart.debian.net>
+Date: Wed, 25 Apr 2012 21:23:31 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.59.1 (31 Jan 2010) on bach.debian.net
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mozart.debian.net
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (hurd-i386) 10 mai 2011 11:22 ║
+║ tabix 0.2.5-2 (hurd-i386) 25 avril 2012 21:18 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: hurd-i386
-Chroot Build Dir: /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7
-Start Time: 20110510-1122
Ign file: ./ InRelease
Ign file: ./ Release.gpg
Ign file: ./ Release
Ign file: ./ Translation-en
-Ign file: ./ Translation-fr
-Hit http://ftp.uk.debian.org sid InRelease
+Hit http://ftp.fr.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Get:1 http://incoming.debian.org Release.gpg [836 B]
Ign http://ftp.debian-ports.org unreleased InRelease
-Get:2 http://incoming.debian.org Release [1604 B]
+Hit http://incoming.debian.org Release.gpg
+Hit http://ftp.fr.debian.org sid/main Sources/DiffIndex
Hit http://ftp.debian-ports.org unreleased Release.gpg
-Hit http://ftp.uk.debian.org sid/main Sources/DiffIndex
+Hit http://incoming.debian.org Release
+Hit http://ftp.fr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.fr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.fr.debian.org sid/main hurd-i386 Packages/DiffIndex
Hit http://ftp.debian-ports.org unreleased Release
-Get:3 http://incoming.debian.org Sources [27.5 kB]
-Hit http://ftp.uk.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.uk.debian.org sid/non-free Sources/DiffIndex
-Hit http://ftp.uk.debian.org sid/main hurd-i386 Packages/DiffIndex
-Hit http://ftp.uk.debian.org sid/contrib hurd-i386 Packages/DiffIndex
-Hit http://ftp.uk.debian.org sid/non-free hurd-i386 Packages/DiffIndex
-Ign http://ftp.uk.debian.org sid/contrib TranslationIndex
-Hit http://ftp.uk.debian.org sid/main TranslationIndex
-Ign http://ftp.uk.debian.org sid/non-free TranslationIndex
-Hit http://ftp.uk.debian.org sid/main Translation-fr
-Get:4 http://incoming.debian.org Packages [510 kB]
-Ign http://ftp.uk.debian.org sid/contrib Translation-en
-Ign http://ftp.uk.debian.org sid/contrib Translation-fr
-Ign http://ftp.uk.debian.org sid/non-free Translation-en
-Ign http://ftp.uk.debian.org sid/non-free Translation-fr
+Hit http://ftp.fr.debian.org sid/contrib hurd-i386 Packages/DiffIndex
+Ign http://ftp.fr.debian.org sid/contrib TranslationIndex
+Hit http://ftp.fr.debian.org sid/main TranslationIndex
+Hit http://ftp.fr.debian.org sid/contrib Translation-en
+Hit http://ftp.fr.debian.org sid/main Translation-en
+Hit http://incoming.debian.org Sources
+Hit http://incoming.debian.org Packages
Hit http://ftp.debian-ports.org unreleased/main hurd-i386 Packages
Ign http://ftp.debian-ports.org unreleased/main TranslationIndex
-Ign http://ftp.debian-ports.org unreleased/main Translation-en
-Ign http://ftp.debian-ports.org unreleased/main Translation-fr
Ign http://incoming.debian.org Translation-en
-Ign http://incoming.debian.org Translation-fr
-Fetched 540 kB in 1min 12s (7414 B/s)
+Ign http://ftp.debian-ports.org unreleased/main Translation-en
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -88,60 +78,106 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (98.4 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (88.5 kB/s)
Download complete and in download only mode
Check arch
──────────
-** Using build dependencies supplied by package:
-Build-Depends: cdbs, debhelper (>= 8), zlib1g-dev
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install build dependencies (internal resolver) │
+│ Install core build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Checking for already installed source dependencies...
-cdbs: missing
-debhelper: already installed (8.1.2 >= 8 is satisfied)
-zlib1g-dev: missing
-Checking for source dependency conflicts...
-Installing positive dependencies: cdbs zlib1g-dev
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5)
+fakeroot: already installed (1.18.2-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libpopt0 libwrap0 liblzo2-2 libsysfs2 libssl1.0.0 libusb-0.1-4p
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
Use 'apt-get autoremove' to remove them.
-Suggested packages:
- devscripts
-Recommended packages:
- autotools-dev
-The following NEW packages will be installed:
- cdbs zlib1g-dev
-0 upgraded, 2 newly installed, 0 to remove and 68 not upgraded.
-Need to get 0 B/262 kB of archives.
-After this operation, 803 kB of additional disk space will be used.
-WARNING: The following packages cannot be authenticated!
- cdbs zlib1g-dev
-Authentication warning overridden.
-Selecting previously deselected package cdbs.
-(Reading database ... 14489 files and directories currently installed.)
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_hurd-i386.deb) ...
-Processing triggers for man-db ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
Removing negative dependencies:
-Checking correctness of source dependencies...
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages were automatically installed and are no longer required:
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, hurd, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc0.3-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), hurd-dev, debhelper (>= 9), zlib1g-dev
+Checking for already installed dependencies...
+base-files: already installed (6.5)
+base-passwd: already installed (3.5.23)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3)
+dash: already installed (0.5.7-2)
+debianutils: already installed (4.0.4)
+diffutils: already installed (1:3.2-1)
+dpkg: already installed (1.16.1.1)
+e2fsprogs: already installed (1.42.1-2)
+findutils: already installed (4.4.2-1+b1)
+grep: already installed (2.9-2)
+gzip: already installed (1.3.12-9)
+hostname: already installed (3.06)
+hurd: already installed (20111206-1)
+ncurses-base: already installed (5.9-4)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
+sed: already installed (4.2.1-9)
+sysvinit-utils: already installed (2.88dsf-13.13)
+sysvinit: already installed (2.88dsf-13.13)
+tar: already installed (1.26-2)
+bsdutils: already installed (1:2.19.1-5)
+util-linux: already installed (2.19.1-5)
+libc0.3-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.1.1 >= 1.13.5 is satisfied)
+hurd-dev: already installed (20111206-1)
+debhelper: already installed (9.20120419 >= 9 is satisfied)
+zlib1g-dev: already installed (1:1.2.6.dfsg-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages were automatically installed and are no longer required:
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages were automatically installed and are no longer required:
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+Checking correctness of dependencies...
Kernel: GNU 0.3 hurd-i386 (i686-AT386)
-Toolchain package versions: libc0.3-dev_2.11.2-13 dpkg-dev_1.16.0.2 hurd-dev_20110303-1~1 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gcc-4.6_4.6.0-6 g++-4.6_4.6.0-6 binutils_2.21.51.20110419-2 libstdc++6-4.6-dev_4.6.0-6 libstdc++6_4.6.0-6
-Package versions: adduser_3.112+nmu1 apt_0.8.13.2 apt-utils_0.8.13.2 base-files_5.9 base-passwd_3.5.22 bash_4.1-3+hurd.1 binutils_2.21.51.20110419-2 bsd-mailx_8.1.2-0.20100314cvs-1 bsdmainutils_8.0.13 bsdutils_1:2.16.2-0 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.5-10 cpp-4.5_4.5.3-1 cpp-4.6_4.6.0-6 cron_3.0pl1-116 dash_0.5.5.1-7 debconf_1.5.35 debconf-english_1.5.35 debfoster_2.6-2 debhelper_8.1.2 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2011.01.12 debianutils_3.4.1 deborphan_1.7.28 dialog_1.1-20100428-1 diffutils_1:3.0-1 dpkg_1.15.8.5 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-3 e2fsprogs_1.41.12-3 exim4-base_4.72-3+b1 exim4-config_4.72-3 exim4-daemon-light_4.72-3+b1 fakeroot_1.15.1-1 file_5.03-5+b1 findutils_4.4.2-1 fontconfig_2.8.0-2.2 fontconfig-config_2.8.0-2.2 g++_4:4.4.4-2 g++-4.4_4.4.5-10 g++-4.5_4.5.3-1 g++-4.6_4.6.0-6 gawk_1:3.1.7.dfsg-5 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6+b1 gcc-4.4_4.4.5-10 gcc-4.4-base_4.4.5-10 gcc-4.5_4.5.3-1 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gfortran-4.4_4.4.5-10 gnumach-dev_2:1.3.99.dfsg.git20100732-1 gnupg_1.4.10-4 gobjc-4.4_4.4.5-10 gpgv_1.4.10-4 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.04 html2text_1.3.2a-15+b1 hurd_20110319-1 hurd-dev_20110303-1~1 initscripts_2.88dsf-12 insserv_1.14.0-2 install-info_4.13a.dfsg.1-5 intltool-debian_0.35.0+20060710.1 libacl1_2.2.47-3 libattr1_1:2.4.44-2 libblkid1_2.16.2-0 libbz2-1.0_1.0.5-6 libc-bin_2.11.2-13 libc-dev-bin_2.11.2-13 libc0.3_2.11.2-13 libc0.3-dev_2.11.2-13 libc0.3-xen_2.11.2-13 libcloog-ppl0_0.15.9-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-6 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libelfg0_0.8.13-1 libexpat1_2.0.1-7 libfontconfig1_2.8.0-2.2 libfreetype6_2.4.4-1 libgcc1_1:4.6.0-6 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgfortran3_4.6.0-6 libglib2.0-0_2.28.6-1 libglib2.0-data_2.28.0-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-1+b1 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.4-2 libgomp1_4.6.0-6 libgpg-error0_1.10-0.3 libldap-2.4-2_2.4.17-1 liblockfile1_1.08-4 liblzma2_5.0.0-2 liblzo2-2_2.04-1 libmagic1_5.03-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libobjc2_4.4.5-10 libpam-modules_1.1.1-6 libpam-runtime_1.1.1-6 libpam0g_1.1.2-3 libparted0debian1_2.3-3+hurd.1 libpcre3_8.12-3+b1 libpng12-0_1.2.44-2 libpopt0_1.16-1 libppl-c2_0.10.2-9 libppl7_0.10.2-9 libpthread-stubs0_0.3-2 libpthread-stubs0-dev_0.3-2 libquadmath0_4.6.0-6 libreadline6_6.2-1 libsasl2-2_2.1.23.dfsg1-8 libsasl2-modules_2.1.23.dfsg1-8 libslang2_2.2.4-2 libss2_1.41.12-2 libssl0.9.8_0.9.8o-5 libssl1.0.0_1.0.0d-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.5-10 libstdc++6-4.5-dev_4.5.3-1 libstdc++6-4.6-dev_4.6.0-6 libsysfs2_2.1.0+repack-1 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-3 libusb-0.1-4p_2:0.1.12-13+hurd.1 libuuid1_2.16.2-0 libwrap0_7.6.dbs-14+hurd.2 libxml2_2.7.8.dfsg-2+b1 lsb-base_3.2-25 make_3.81-8 man-db_2.5.7-4 mawk_1.3.3-15 ncurses-base_5.7+20100313-4 ncurses-bin_5.9-1 netbase_4.42 netcat-traditional_1.10-39 passwd_1:4.1.4.2+svn3283-2 patch_2.6-3 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16 procps_1:3.2.7-11 psmisc_22.3-1 readline-common_6.1-3 sed_4.2.1-7 sensible-utils_0.0.4 sgml-base_1.26+nmu1 shared-mime-info_0.71-3 sudo_1.7.2p7-1 sysv-rc_2.88dsf-12 sysvinit_2.88dsf-12 sysvinit-utils_2.88dsf-12 tar_1.23-3 ttf-freefont_20090104-7 type-handling_0.2.23 tzdata_2010m-1 ucf_3.0025+nmu1 util-linux_2.16.2-0 xml-core_0.13 xz-utils_4.999.9beta+20100810-1 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-5+hurd.1 dpkg-dev_1.16.1.1 g++-4.6_4.6.3-1+hurd.2 gcc-4.6_4.6.3-1+hurd.2 gnumach-dev_2:1.3.99.dfsg.git20111010-1 hurd-dev_20111206-1 libc0.3-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1+hurd.2
+Package versions: adduser_3.113 apt_0.8.15.9 apt-utils_0.8.15.9 autotools-dev_20120210.1 base-files_6.5 base-passwd_3.5.23 bash_4.2-2 binutils_2.22-5+hurd.1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1+hurd.2 cron_3.0pl1-120 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2012.01.08 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-1+b1 g++_4:4.6.1-3 g++-4.6_4.6.3-1+hurd.2 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-9 gcc-4.6_4.6.3-1+hurd.2 gcc-4.6-base_4.6.3-1+hurd.2 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnumach-dev_2:1.3.99.dfsg.git20111010-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-7 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15+b1 hurd_20111206-1 hurd-dev_20111206-1 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg-dev_0.8.15.9 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libboost-iostreams1.46.1_1.46.1-8 libboost-iostreams1.48.0_1.48.0-3 libboost-iostreams1.49.0_1.49.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.3_2.13-27 libc0.3-dev_2.13-27 libc0.3-xen_2.13-27 libclass-isa-perl_0.36-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcwidget3_0.5.16-3.1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.1 libept-dev_1.0.5 libept1_1.0.5 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3 libfreexl-dev_1.0.0b-1 libfreexl1_1.0.0b-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgeos-3.3.1_3.3.1-1 libgeos-c1_3.3.1-1 libgeos-dev_3.3.1-1 libglib2.0-0_2.32.0-4 libglib2.0-data_2.28.8-1 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.18-1 libgomp1_4.7.0-3 libgpg-error0_1.10-3 libldap-2.4-2_2.4.28-1.1 liblocale-gettext-perl_1.05-7+b1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libp11-kit0_0.12-3 libpam-modules_1.1.3-5 libpam-modules-bin_1.1.3-5 libpam-runtime_1.1.3-5 libpam0g_1.1.3-7 libparted0debian1_2.3-3+hurd.1 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libpopt0_1.16-3 libproj-dev_4.7.0-1 libproj0_4.7.0-1 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsasl2-2_2.1.25.dfsg1-4 libsasl2-modules_2.1.25.dfsg1-4 libsigc++-2.0-0c2a_2.2.10-0.1 libsigsegv2_2.9-4 libslang2_2.2.4-8 libsqlite3-0_3.7.11-2 libsqlite3-dev_3.7.11-2 libss2_1.42.1-2 libssl0.9.8_0.9.8o-7+b1 libssl1.0.0_1.0.1a-3 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1+hurd.2 libswitch-perl_2.16-2 libsysfs2_2.1.0+repack-1 libtagcoll2-dev_2.0.13-1 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4+b1 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libuuid1_2.20.1-4 libwibble-dev_0.1.26-1 libxapian-dev_1.2.7-1 libxapian22_1.2.7-1 libxml2_2.7.8.dfsg-9 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-16 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.2.8-11 proj-data_4.7.0-1 psmisc_22.16-1+hurd.1 readline-common_6.2-7 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 shared-mime-info_0.90-1 sudo_1.7.2p7-1 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-2 tzdata_2011n-1 util-linux_2.19.1-5 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-1 zlib1g-dev_1:1.2.6.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -151,14 +187,15 @@ Package versions: adduser_3.112+nmu1 apt_0.8.13.2 apt-utils_0.8.13.2 base-files_
Unpack source
─────────────
-dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -167,143 +204,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture hurd-i386
/usr/bin/fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-dh_clean
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+ dh_clean
debian/rules build
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-test -x debian/rules
-mkdir -p "."
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+dh build
+ dh_testdir
+ dh_auto_configure
+ dh_auto_build
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7/tabix-0.2.5'
-touch debian/stamp-makefile-build
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+ dh_auto_test
/usr/bin/fakeroot debian/rules binary-arch
-DEB_MAKE_CHECK_TARGET unset, not running checks
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_hurd-i386.deb'.
- dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org> >../tabix_0.2.5-1_hurd-i386.changes
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_hurd-i386.deb'.
+ dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org> >../tabix_0.2.5-2_hurd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1126
+Build finished at 20120425-2123
-tabix_0.2.5-1_hurd-i386.changes:
+tabix_0.2.5-2_hurd-i386.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: hurd-i386
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 08ed9a6fc9c05d384e3a90540df32433e5f805e8 60130 tabix_0.2.5-1_hurd-i386.deb
+ 382a3d74c51e092bd307d8e05b8df8df5ba377de 62942 tabix_0.2.5-2_hurd-i386.deb
Checksums-Sha256:
- 790f0450477baa7be3e6f6ef44dba3eb362e6eeac12ba41c114851ed02ed7445 60130 tabix_0.2.5-1_hurd-i386.deb
+ 4e3ebe57c61da2d0d1699b2c5cd881b5a3566bb688668b88c85e5a2e382bcdb6 62942 tabix_0.2.5-2_hurd-i386.deb
Files:
- 01d7a1ba007c16cadbe5efe88109119c 60130 science optional tabix_0.2.5-1_hurd-i386.deb
+ b5fb5c7e28d2beea5cf1e98167bfb5ba 62942 science optional tabix_0.2.5-2_hurd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_hurd-i386.deb
+tabix_0.2.5-2_hurd-i386.deb
───────────────────────────
new debian package, version 2.0.
- size 60130 bytes: control archive= 1003 bytes.
- 792 bytes, 16 lines control
+ size 62942 bytes: control archive= 1000 bytes.
+ 786 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: hurd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 168
- Depends: libc0.3 (>= 2.11), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 151
+ Depends: libc0.3 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -315,26 +375,26 @@ tabix_0.2.5-1_hurd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/bin/
+-rwxr-xr-x root/root 72016 2012-04-25 21:22 ./usr/bin/tabix
+-rwxr-xr-x root/root 26464 2012-04-25 21:22 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:26 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/bin/
--rwxr-xr-x root/root 68324 2011-05-10 11:26 ./usr/bin/tabix
--rwxr-xr-x root/root 24272 2011-05-10 11:26 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:22 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -343,12 +403,46 @@ lrwxr-xr-x root/root 0 2011-05-10 11:26 ./usr/share/man/man1/bgzip.1.gz
Built successfully
────────────────────────────────────────────────────────────────────────────────
-Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-1-hurd-i386-zTnyv7
-(Reading database ... 14574 files and directories currently installed.)
-Removing cdbs ...
-Removing zlib1g-dev ...
-Processing triggers for man-db ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages were automatically installed and are no longer required:
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages were automatically installed and are no longer required:
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: hurd-i386
+Build-Space: 1532
+Build-Time: 72
+Distribution: sid
+Install-Time: 23
+Job: tabix_0.2.5-2
+Package: tabix
+Package-Time: 266
+Source-Version: 0.2.5-2
+Space: 1532
+Status: successful
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1126
-Build needed 00:04:29, 1404k disc space
+Finished at 20120425-2123
+Build needed 00:04:26, 1532k disc space
diff --git a/i386.log b/i386.log
index 1e8e722..763105c 100644
--- a/i386.log
+++ b/i386.log
@@ -1,4 +1,4 @@
-From buildd at biber.debian.org Tue May 10 11:18:26 2011
+From buildd at biber.debian.org Wed Apr 25 21:19:35 2012
Return-path: <buildd at biber.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -6,63 +6,61 @@ Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at biber.debian.org>)
- id 1QJkxO-0006Xz-4t
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:26 +0000
+ id 1SN9cc-0003rc-P7
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:34 +0000
Received: from biber.debian.org ([2001:648:2ffc:deb:214:22ff:feb2:1268])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=biber.debian.org, EMAIL=hostmaster at biber.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at biber.debian.org>)
- id 1QJkxM-00077y-S5; Tue, 10 May 2011 11:18:25 +0000
+ id 1SN9cb-0006Ni-JW; Wed, 25 Apr 2012 21:19:33 +0000
Received: from buildd by biber.debian.org with local (Exim 4.72)
(envelope-from <buildd at biber.debian.org>)
- id 1QJkxL-0002ZA-Up; Tue, 10 May 2011 11:18:23 +0000
-Message-Id: <E1QJkxL-0002ZA-Up at biber.debian.org>
+ id 1SN9ca-0003di-Jd; Wed, 25 Apr 2012 21:19:32 +0000
+Message-Id: <E1SN9ca-0003di-Jd at biber.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 10 May 2011 11:18:23 +0000
+Date: Wed, 25 Apr 2012 21:19:32 +0000
From: buildd on biber <buildd at biber.debian.org>
To: kurt at roeckx.be,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on i386 (dist=sid)
-Key-Id: 44C3EAC7
+Subject: Log for successful build of tabix_0.2.5-2 on i386 (dist=sid)
+Key-Id: 6EBCB100
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on biber.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (i386) 10 May 2011 11:16 ║
+║ tabix 0.2.5-2 (i386) 25 Apr 2012 21:17 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: i386
-Get:1 http://ftp.gr.debian.org unstable InRelease [167 kB]
-Get:2 http://ftp.gr.debian.org unstable/main Sources [5657 kB]
-Get:3 http://ftp.gr.debian.org unstable/contrib Sources [51.4 kB]
-Get:4 http://ftp.gr.debian.org unstable/non-free Sources [97.1 kB]
-Get:5 http://ftp.gr.debian.org unstable/main i386 Packages [7282 kB]
-Get:6 http://incoming.debian.org unstable InRelease [167 kB]
-Get:7 http://ftp.gr.debian.org unstable/contrib i386 Packages [64.7 kB]
-Ign http://ftp.gr.debian.org unstable/contrib TranslationIndex
-Get:8 http://ftp.gr.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://ftp.gr.debian.org unstable/contrib Translation-en
+Get:1 http://ftp.gr.debian.org unstable InRelease [210 kB]
+Get:2 http://ftp.gr.debian.org unstable/main Sources [6244 kB]
+Get:3 http://incoming.debian.org unstable InRelease [210 kB]
+Get:4 http://ftp.gr.debian.org unstable/contrib Sources [53.9 kB]
+Get:5 http://ftp.gr.debian.org unstable/non-free Sources [97.9 kB]
+Get:6 http://ftp.gr.debian.org unstable/main i386 Packages [5973 kB]
+Get:7 http://ftp.gr.debian.org unstable/contrib i386 Packages [45.9 kB]
+Get:8 http://ftp.gr.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:9 http://ftp.gr.debian.org unstable/main Translation-en [3943 kB]
Ign http://incoming.debian.org InRelease
-Get:9 http://incoming.debian.org Release.gpg [836 B]
-Get:10 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main i386 Packages [7282 kB]
-Get:14 http://incoming.debian.org unstable/contrib i386 Packages [64.7 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:10 http://incoming.debian.org Release.gpg [836 B]
+Get:11 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:12 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:13 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:14 http://incoming.debian.org unstable/main i386 Packages [5974 kB]
+Get:15 http://incoming.debian.org unstable/contrib i386 Packages [45.9 kB]
+Get:16 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:17 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org Sources [33.5 kB]
+Get:20 http://incoming.debian.org Packages [517 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 27.2 MB in 13s (2023 kB/s)
+Fetched 33.8 MB in 28s (1197 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -83,11 +81,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (63.0 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (69.3 kB/s)
Download complete and in download only mode
Check arch
@@ -101,173 +99,172 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.11-3)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 10 not upgraded.
-Need to get 9047 kB of archives.
-After this operation, 27.2 MB of additional disk space will be used.
-Get:1 http://ftp.gr.debian.org/debian/ unstable/main bsdmainutils i386 8.2.2 [200 kB]
-Get:2 http://ftp.gr.debian.org/debian/ unstable/main groff-base i386 1.21-5 [1125 kB]
-Get:3 http://ftp.gr.debian.org/debian/ unstable/main libpipeline1 i386 1.2.0-1 [35.6 kB]
-Get:4 http://ftp.gr.debian.org/debian/ unstable/main man-db i386 2.6.0.2-1 [991 kB]
-Get:5 http://ftp.gr.debian.org/debian/ unstable/main libmagic1 i386 5.04-5+b1 [233 kB]
-Get:6 http://ftp.gr.debian.org/debian/ unstable/main file i386 5.04-5+b1 [49.4 kB]
-Get:7 http://ftp.gr.debian.org/debian/ unstable/main gettext-base i386 0.18.1.1-3 [130 kB]
-Get:8 http://ftp.gr.debian.org/debian/ unstable/main libpcre3 i386 8.12-3 [255 kB]
-Get:9 http://ftp.gr.debian.org/debian/ unstable/main libxml2 i386 2.7.8.dfsg-2+b1 [831 kB]
-Get:10 http://ftp.gr.debian.org/debian/ unstable/main html2text i386 1.3.2a-15 [101 kB]
-Get:11 http://ftp.gr.debian.org/debian/ unstable/main libglib2.0-0 i386 2.28.6-1 [1503 kB]
-Get:12 http://ftp.gr.debian.org/debian/ unstable/main libcroco3 i386 0.6.2-1 [116 kB]
-Get:13 http://ftp.gr.debian.org/debian/ unstable/main libunistring0 i386 0.9.3-4 [431 kB]
-Get:14 http://ftp.gr.debian.org/debian/ unstable/main gettext i386 0.18.1.1-3 [1973 kB]
-Get:15 http://ftp.gr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://ftp.gr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://ftp.gr.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://ftp.gr.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://ftp.gr.debian.org/debian/ unstable/main zlib1g-dev i386 1:1.2.3.4.dfsg-3 [186 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 20 not upgraded.
+Need to get 9931 kB of archives.
+After this operation, 25.8 MB of additional disk space will be used.
+Get:1 http://ftp.gr.debian.org/debian/ unstable/main libpipeline1 i386 1.2.1-1 [38.6 kB]
+Get:2 http://ftp.gr.debian.org/debian/ unstable/main libmagic1 i386 5.11-1 [250 kB]
+Get:3 http://ftp.gr.debian.org/debian/ unstable/main libpcre3 i386 1:8.30-4 [240 kB]
+Get:4 http://ftp.gr.debian.org/debian/ unstable/main libxml2 i386 2.7.8.dfsg-9 [886 kB]
+Get:5 http://ftp.gr.debian.org/debian/ unstable/main libffi5 i386 3.0.10-3 [21.0 kB]
+Get:6 http://ftp.gr.debian.org/debian/ unstable/main libglib2.0-0 i386 2.32.0-4 [2048 kB]
+Get:7 http://ftp.gr.debian.org/debian/ unstable/main libcroco3 i386 0.6.5-1 [151 kB]
+Get:8 http://ftp.gr.debian.org/debian/ unstable/main libunistring0 i386 0.9.3-5 [442 kB]
+Get:9 http://ftp.gr.debian.org/debian/ unstable/main bsdmainutils i386 9.0.1 [205 kB]
+Get:10 http://ftp.gr.debian.org/debian/ unstable/main groff-base i386 1.21-7 [1128 kB]
+Get:11 http://ftp.gr.debian.org/debian/ unstable/main man-db i386 2.6.1-2 [1051 kB]
+Get:12 http://ftp.gr.debian.org/debian/ unstable/main file i386 5.11-1 [52.7 kB]
+Get:13 http://ftp.gr.debian.org/debian/ unstable/main gettext-base i386 0.18.1.1-5 [133 kB]
+Get:14 http://ftp.gr.debian.org/debian/ unstable/main html2text i386 1.3.2a-15 [101 kB]
+Get:15 http://ftp.gr.debian.org/debian/ unstable/main gettext i386 0.18.1.1-5 [2025 kB]
+Get:16 http://ftp.gr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.gr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.gr.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.gr.debian.org/debian/ unstable/main zlib1g-dev i386 1:1.2.6.dfsg-2 [210 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9047 kB in 1s (7303 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 10641 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_i386.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_i386.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_i386.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_i386.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_i386.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_i386.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_i386.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_i386.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_i386.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9931 kB in 0s (12.6 MB/s)
+Selecting previously unselected package libpipeline1:i386.
+(Reading database ... 10816 files and directories currently installed.)
+Unpacking libpipeline1:i386 (from .../libpipeline1_1.2.1-1_i386.deb) ...
+Selecting previously unselected package libmagic1:i386.
+Unpacking libmagic1:i386 (from .../libmagic1_5.11-1_i386.deb) ...
+Selecting previously unselected package libpcre3:i386.
+Unpacking libpcre3:i386 (from .../libpcre3_1%3a8.30-4_i386.deb) ...
+Selecting previously unselected package libxml2:i386.
+Unpacking libxml2:i386 (from .../libxml2_2.7.8.dfsg-9_i386.deb) ...
+Selecting previously unselected package libffi5:i386.
+Unpacking libffi5:i386 (from .../libffi5_3.0.10-3_i386.deb) ...
+Selecting previously unselected package libglib2.0-0:i386.
+Unpacking libglib2.0-0:i386 (from .../libglib2.0-0_2.32.0-4_i386.deb) ...
+Selecting previously unselected package libcroco3:i386.
+Unpacking libcroco3:i386 (from .../libcroco3_0.6.5-1_i386.deb) ...
+Selecting previously unselected package libunistring0:i386.
+Unpacking libunistring0:i386 (from .../libunistring0_0.9.3-5_i386.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_i386.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_i386.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_i386.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_i386.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_i386.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_i386.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_i386.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_i386.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_i386.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_i386.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_i386.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:i386.
+Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_i386.deb) ...
+Setting up libpipeline1:i386 (1.2.1-1) ...
+Setting up libmagic1:i386 (5.11-1) ...
+Setting up libpcre3:i386 (1:8.30-4) ...
+Setting up libxml2:i386 (2.7.8.dfsg-9) ...
+Setting up libffi5:i386 (3.0.10-3) ...
+Setting up libglib2.0-0:i386 (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:i386 (0.6.5-1) ...
+Setting up libunistring0:i386 (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:i386 (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-amd64 i386 (x86_64)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-6 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-6 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
+Package versions: apt_0.9.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libquadmath0_4.7.0-3 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -278,12 +275,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -292,144 +291,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture i386
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-i386-UkeebA/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_i386.deb'.
- dpkg-genchanges -B -mi386 Build Daemon <buildd_i386-biber at buildd.debian.org> >../tabix_0.2.5-1_i386.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_i386.deb'.
+ dpkg-genchanges -B -mi386 Build Daemon <buildd_i386-biber at buildd.debian.org> >../tabix_0.2.5-2_i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1118
+Build finished at 20120425-2119
-tabix_0.2.5-1_i386.changes:
+tabix_0.2.5-2_i386.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: i386
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: i386 Build Daemon <buildd_i386-biber at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- ca0acd05ef77ea1ac4e8e02c376664f54ff9c9e3 59818 tabix_0.2.5-1_i386.deb
+ 2a80453bea4ac5a2b9c0801408e525455ccf4968 62738 tabix_0.2.5-2_i386.deb
Checksums-Sha256:
- d5818d4aa5f23713862a040e30058c638813f897124f9e018b445f341233918d 59818 tabix_0.2.5-1_i386.deb
+ 49f78b142ae756bc53439130b0c57406be94b2f2c84508886c893875d973d3b6 62738 tabix_0.2.5-2_i386.deb
Files:
- 5f885cdf9603e292efd9a7d083c7e778 59818 science optional tabix_0.2.5-1_i386.deb
+ ef7fcad8a6178d9f264d616bc3e0f3be 62738 science optional tabix_0.2.5-2_i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_i386.deb
+tabix_0.2.5-2_i386.deb
──────────────────────
new debian package, version 2.0.
- size 59818 bytes: control archive= 991 bytes.
- 784 bytes, 16 lines control
+ size 62738 bytes: control archive= 994 bytes.
+ 779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 168
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 151
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -441,26 +462,26 @@ tabix_0.2.5-1_i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 68216 2011-05-10 11:17 ./usr/bin/tabix
--rwxr-xr-x root/root 24164 2011-05-10 11:17 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/bin/
+-rwxr-xr-x root/root 71812 2012-04-25 21:18 ./usr/bin/tabix
+-rwxr-xr-x root/root 26452 2012-04-25 21:18 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:18 ./usr/share/man/man1/tabix.1.gz
+lrwxrwxrwx root/root 0 2012-04-25 21:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -474,7 +495,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-i386-sbuild-9e553c1f-b31c-4c5c-851e-1fce8607b12f/build/buildd-tabix_0.2.5-1-i386-UkeebA
+Purging /var/lib/schroot/mount/sid-i386-sbuild-1b4c1252-ba6e-44e6-aa83-6216f90c0064/build/buildd-tabix_0.2.5-2-i386-RnqN3R
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -482,18 +503,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: i386
-Build-Space: 1404
-Build-Time: 13
+Build-Space: 1520
+Build-Time: 12
Distribution: sid
Install-Time: 35
-Job: tabix_0.2.5-1
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 75
-Source-Version: 0.2.5-1
-Space: 1404
+Package-Time: 88
+Source-Version: 0.2.5-2
+Space: 1520
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1118
-Build needed 00:01:15, 1404k disc space
-Signature with key '44C3EAC7' requested:
+Finished at 20120425-2119
+Build needed 00:01:28, 1520k disc space
+Signature with key '6EBCB100' requested:
diff --git a/ia64.log b/ia64.log
index 04507af..0233fa0 100644
--- a/ia64.log
+++ b/ia64.log
@@ -1,66 +1,160 @@
-From buildd at caballero.debian.org Tue May 10 11:18:12 2011
+From buildd at caballero.debian.org Wed Apr 25 21:14:26 2012
Return-path: <buildd at caballero.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
- id 1QJkxA-0006VD-6p
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:12 +0000
+ id 1SN9Xd-0002oz-Lx
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:14:26 +0000
Received: from caballero.debian.org ([193.201.200.200])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=caballero.debian.org,
EMAIL=hostmaster at caballero.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at caballero.debian.org>)
- id 1QJkxB-0003dP-ML; Tue, 10 May 2011 11:18:13 +0000
-Received: from buildd by caballero.debian.org with local (Exim 4.69)
- (envelope-from <buildd at caballero.debian.org>) id 1QJkx3-0002Cw-21
- for buildd-porters at caballero.debian.org; Tue, 10 May 2011 11:18:05 +0000
+ (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
+ id 1SN9Xc-00068m-3R; Wed, 25 Apr 2012 21:14:24 +0000
+Received: from buildd by caballero.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at caballero.debian.org>) id 1SN9Xb-0001a9-8R
+ for buildd-porters at caballero.debian.org; Wed, 25 Apr 2012 21:14:23 +0000
+Date: Wed, 25 Apr 2012 21:14:23 +0000
+Message-Id: <E1SN9Xb-0001a9-8R at caballero.debian.org>
From: buildd on caballero <buildd at caballero.debian.org>
To: buildd-porters at caballero.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on ia64 (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-2 on ia64 (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1QJkx3-0002Cw-21 at caballero.debian.org>
-Date: Tue, 10 May 2011 11:18:05 +0000
Delivered-To: buildd-porters at caballero.debian.org
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on caballero.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (ia64) 10 May 2011 11:16 ║
+║ tabix 0.2.5-2 (ia64) 25 Apr 2012 21:13 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: ia64
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Hit http://mirror.positive-internet.com sid InRelease
Hit http://mirror.positive-internet.com sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid InRelease
+Get:1 http://incoming.debian.org sid InRelease [210 kB]
Ign http://incoming.debian.org InRelease
Hit http://mirror.positive-internet.com sid/contrib Sources/DiffIndex
Hit http://mirror.positive-internet.com sid/main ia64 Packages/DiffIndex
Hit http://mirror.positive-internet.com sid/contrib ia64 Packages/DiffIndex
-Ign http://mirror.positive-internet.com sid/contrib TranslationIndex
-Hit http://mirror.positive-internet.com sid/main TranslationIndex
-Get:1 http://incoming.debian.org Release.gpg [836 B]
-Ign http://mirror.positive-internet.com sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
+Hit http://mirror.positive-internet.com sid/contrib Translation-en/DiffIndex
+Hit http://mirror.positive-internet.com sid/main Translation-en/DiffIndex
+Get:2 http://incoming.debian.org Release.gpg [836 B]
+Get:3 http://incoming.debian.org sid/main Sources/DiffIndex [7876 B]
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main ia64 Packages/DiffIndex
+Get:4 http://incoming.debian.org sid/main ia64 Packages/DiffIndex [7876 B]
Hit http://incoming.debian.org sid/contrib ia64 Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Get:2 http://incoming.debian.org Release [1604 B]
-Get:3 http://incoming.debian.org Sources [27.9 kB]
-Get:4 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org sid/contrib Translation-en
+Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
+Get:5 http://incoming.debian.org sid/main Translation-en/DiffIndex [7876 B]
+Get:6 http://incoming.debian.org Release [1601 B]
+Get:7 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [8469 B]
+Get:8 http://incoming.debian.org sid/main ia64 2012-04-25-2014.24.pdiff [7314 B]
+Get:9 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [416 B]
+Get:10 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [8469 B]
+Get:11 http://incoming.debian.org Sources [33.5 kB]
+Get:12 http://incoming.debian.org Packages [517 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 575 kB in 6s (82.4 kB/s)
+Get:13 http://incoming.debian.org sid/main ia64 2012-04-25-2014.24.pdiff [7314 B]
+Get:14 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [416 B]
+Fetched 802 kB in 21s (36.9 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -72,20 +166,80 @@ Check APT
─────────
Checking available source versions...
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Download source files with APT
──────────────────────────────
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (101 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (123 kB/s)
Download complete and in download only mode
Check arch
@@ -98,154 +252,373 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Installing positive dependencies:
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
Removing negative dependencies:
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
Checking correctness of dependencies...
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.2.2)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-4)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6.1-dev: already installed (2.13-2)
-gcc: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
-debhelper: missing
-Using default version 8.1.6
-zlib1g-dev: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6.1-dev: already installed (2.13-30)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+debhelper: already installed (9.20120410 >= 9 is satisfied)
+zlib1g-dev: already installed (1:1.2.6.dfsg-2)
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+Installing positive dependencies:
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-The following extra packages will be installed:
- bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
-Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
-Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
-The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
-Need to get 0 B/11.1 MB of archives.
-After this operation, 38.9 MB of additional disk space will be used.
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 10485 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_ia64.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_ia64.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_ia64.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_ia64.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_ia64.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_ia64.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_ia64.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_ia64.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_ia64.deb) ...
-Selecting previously deselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_ia64.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_ia64.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_ia64.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_ia64.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_ia64.deb) ...
-Selecting previously deselected package intltool-debian.
-Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_ia64.deb) ...
-Setting up bsdmainutils (8.2.2) ...
-update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
-update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
-Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
-Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
Removing negative dependencies:
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
Checking correctness of dependencies...
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Kernel: Linux 2.6.32-bpo.5-mckinley ia64 (ia64)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.4_4.4.6-3 gcc-4.4_4.4.6-3 libc6.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.4-dev_4.4.6-3 linux-libc-dev_2.6.38-5
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.4.5-9 cpp-4.4_4.4.6-3 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.4.5-9 g++-4.4_4.4.6-3 gcc_4:4.4.5-9 gcc-4.4_4.4.6-3 gcc-4.4-base_4.4.6-3 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6.1_2.13-2 libc6.1-dev_2.13-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-7 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.4-dev_4.4.6-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libunwind7_0.99-0.2 libunwind7-dev_0.99-0.2 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-5 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.12-1
+Package versions: apt_0.9.1 apt-utils_0.9.1 autoconf_2.68-1 automake_1:1.11.5-1 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 ca-certificates_20120212 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.2 diffutils_1:3.2-2 docutils-common_0.8.1-6 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool_0.50.2-2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-inst1.5_0.9.1 libapt-pkg-dev_0.9.1 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6.1_2.13-30 libc6.1-dev_2.13-30 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb4.8_4.8.30-11 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libencode-locale-perl_1.03-1 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfile-listing-perl_6.04-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libhtml-parser-perl_3.69-2 libhtml-tagset-perl_3.20-2 libhtml-tree-perl_4.2-1 libhttp-cookies-perl_6.00-2 libhttp-date-perl_6.02-1 libhttp-message-perl_6.03-1 libhttp-negotiate-perl_6.00-2 libio-socket-ssl-perl_1.62-1 libjs-jquery_1.7.2-1 libjs-sphinxdoc_1.1.3+dfsg-3 libjs-underscore_1.3.3-1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.03-1 liblzma2_5.0.0-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libnet-http-perl_6.03-1 libnet-ssleay-perl_1.47-1 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpython2.6_2.6.7-4 libpython2.7_2.7.3~rc2-1 libpython3.2_3.2.3~rc2-1 libquadmath0_4.7.0-4 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-8 libsqlite3-0_3.7.11-2 libss2_1.42.2-1 libssl-dev_1.0.1-4 libssl1.0.0_1.0.1-4 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libunwind7_0.99-0.3 libunwind7-dev_0.99-0.3 liburi-perl_1.60-1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libwww-perl_6.04-1 libwww-robotrules-perl_6.01-1 libxml-parser-perl_2.41-1+b1 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 m4_1.4.16-2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 openssl_1.0.1-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 python_2.7.2-10 python-all_2.7.2-10 python-all-dbg_2.7.2-10 python-all-dev_2.7.2-10 python-chardet_2.0.1-2 python-dbg_2.7.2-10 python-debian_0.1.21 python-dev_2.7.2-10 python-distutils-extra_2.32-2 python-docutils_0.8.1-6 python-jinja2_2.6-1 python-markupsafe_0.15-1 python-minimal_2.7.2-10 python-pygments_1.5+dfsg-1 python-roman_0.8.1-6 python-sphinx_1.1.3+dfsg-3 python-support_1.0.14 python2.6_2.6.7-4 python2.6-dbg_2.6.7-4 python2.6-dev_2.6.7-4 python2.6-minimal_2.6.7-4 python2.7_2.7.3~rc2-1 python2.7-dbg_2.7.3~rc2-1 python2.7-dev_2.7.3~rc2-1 python2.7-minimal_2.7.3~rc2-1 python3_3.2.3~rc1-2 python3-all_3.2.3~rc1-2 python3-all-dbg_3.2.3~rc1-2 python3-all-dev_3.2.3~rc1-2 python3-dbg_3.2.3~rc1-2 python3-dev_3.2.3~rc1-2 python3-minimal_3.2.3~rc1-2 python3.2_3.2.3~rc2-1 python3.2-dbg_3.2.3~rc2-1 python3.2-dev_3.2.3~rc2-1 python3.2-minimal_3.2.3~rc2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 sphinx-common_1.1.3+dfsg-3 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -255,14 +628,45 @@ Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -271,155 +675,196 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture ia64
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-dh_clean
- debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-ia64-26qUW3/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6.1 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_ia64.deb'.
- dpkg-genchanges -B -mia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org> >../tabix_0.2.5-1_ia64.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6.1 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_ia64.deb'.
+ dpkg-genchanges -B -mia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org> >../tabix_0.2.5-2_ia64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1117
+Build finished at 20120425-2114
-tabix_0.2.5-1_ia64.changes:
+tabix_0.2.5-2_ia64.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: ia64
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: ia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 972e15bb6a2a247fd9d72368e81f25d81608a4a7 88304 tabix_0.2.5-1_ia64.deb
+ fe4426c5f859644c3e80137d978452a80b79f10e 88262 tabix_0.2.5-2_ia64.deb
Checksums-Sha256:
- 76498611401e9caf577745b0995a554944c659ad7d8b74e1c19f82eceab3ec9f 88304 tabix_0.2.5-1_ia64.deb
+ e1c2193e474ce9f21b18b62c66d578de31eb3ac81f11a31c416a36eb15b9e25c 88262 tabix_0.2.5-2_ia64.deb
Files:
- 3fd2295fae3d9bc4a642e05aa0107b76 88304 science optional tabix_0.2.5-1_ia64.deb
+ 9bad52ef1336445bef61f29f909e6bcf 88262 science optional tabix_0.2.5-2_ia64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_ia64.deb
+tabix_0.2.5-2_ia64.deb
──────────────────────
new debian package, version 2.0.
- size 88304 bytes: control archive= 995 bytes.
- 786 bytes, 16 lines control
+ size 88262 bytes: control archive= 993 bytes.
+ 781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: ia64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 272
- Depends: libc6.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 244
+ Depends: libc6.1 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -431,26 +876,26 @@ tabix_0.2.5-1_ia64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/bin/
+-rwxr-xr-x root/root 141784 2012-04-25 21:14 ./usr/bin/tabix
+-rwxr-xr-x root/root 51936 2012-04-25 21:14 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 141560 2011-05-10 11:17 ./usr/bin/tabix
--rwxr-xr-x root/root 52096 2011-05-10 11:17 ./usr/bin/bgzip
-lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:14 ./usr/share/man/man1/tabix.1.gz
+lrwxrwxrwx root/root 0 2012-04-25 21:14 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -464,69 +909,183 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ia64-sbuild-479ee363-3634-4c52-887a-c1460c82cd46/build/buildd-tabix_0.2.5-1-ia64-26qUW3
+Purging /var/lib/schroot/mount/sid-ia64-sbuild-9b2c21e4-a406-45ba-b28b-ab68e84ea13b/build/buildd-tabix_0.2.5-2-ia64-mGnDax
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages will be REMOVED:
- bsdmainutils* cdbs* debhelper* file* gettext* gettext-base* groff-base*
- html2text* intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3*
- libpipeline1* libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 19 to remove and 0 not upgraded.
-After this operation, 38.9 MB disk space will be freed.
-(Reading database ... 11873 files and directories currently installed.)
-Removing cdbs ...
-Removing debhelper ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing bsdmainutils ...
-Purging configuration files for bsdmainutils ...
-Removing file ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing gettext-base ...
-Removing groff-base ...
-Purging configuration files for groff-base ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing zlib1g-dev ...
+0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
+W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
+I: This option will be removed in the future; please update your configuration
+W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
+I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: ia64
-Build-Space: 2000
-Build-Time: 27
+Build-Space: 2264
+Build-Time: 28
Distribution: sid
-Install-Time: 20
-Job: tabix_0.2.5-1
+Install-Time: 8
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 62
-Source-Version: 0.2.5-1
-Space: 2000
+Package-Time: 70
+Source-Version: 0.2.5-2
+Space: 2264
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1117
-Build needed 00:01:02, 2000k disc space
+Finished at 20120425-2114
+Build needed 00:01:10, 2264k disc space
diff --git a/info b/info
index f6dc4c8..7abf438 100644
--- a/info
+++ b/info
@@ -1,13 +1,13 @@
-powerpc~1305026131~sid~successful
-kfreebsd-i386~1305026218~sid~successful
-s390~1305026231~sid~successful
-kfreebsd-amd64~1305026245~sid~successful
-armel~1305026289~sid~successful
-ia64~1305026293~sid~successful
-mips~1305026299~sid~successful
-i386~1305026306~sid~successful
-mipsel~1305026332~sid~successful
-sparc~1305026422~sid~successful
-hurd-i386~1305026823~sid~successful
-s390x~1322356912~sid~successful
-armhf~1322455384~sid~successful
+ia64~1335388467~sid~successful
+powerpc~1335388677~sid~successful
+kfreebsd-i386~1335388721~sid~successful
+armhf~1335388774~sid~successful
+i386~1335388775~sid~successful
+sparc~1335388801~sid~successful
+armel~1335388974~sid~successful
+hurd-i386~1335389016~sid~successful
+s390~1335389214~sid~successful
+mips~1335390477~sid~successful
+s390x~1335390592~sid~successful
+kfreebsd-amd64~1335396225~sid~successful
+mipsel~1335403694~sid~successful
diff --git a/kfreebsd-amd64.log b/kfreebsd-amd64.log
index ec324cb..f606542 100644
--- a/kfreebsd-amd64.log
+++ b/kfreebsd-amd64.log
@@ -1,76 +1,72 @@
-From buildd at fano.debian.org Tue May 10 11:17:24 2011
-Return-path: <buildd at fano.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at fasch.debian.org Wed Apr 25 23:23:43 2012
+Return-path: <buildd at fasch.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
- id 1QJkwO-0006No-FR
- for logs at buildd.debian.org; Tue, 10 May 2011 11:17:24 +0000
-Received: from fano.debian.org ([206.12.19.110])
+ (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
+ id 1SNBYl-0006IJ-L5
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 23:23:43 +0000
+Received: from fasch.debian.org ([194.177.211.201])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=fano.debian.org, EMAIL=hostmaster at fano.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
- id 1QJkwN-00077S-4A; Tue, 10 May 2011 11:17:23 +0000
-Received: from buildd by fano.debian.org with local (Exim 4.72)
- (envelope-from <buildd at fano.debian.org>)
- id 1QJkwK-000EUP-6U; Tue, 10 May 2011 11:17:20 +0000
-Message-Id: <E1QJkwK-000EUP-6U at fano.debian.org>
+ CN=fasch.debian.org, EMAIL=hostmaster at fasch.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
+ id 1SNBYk-0005Z1-F5; Wed, 25 Apr 2012 23:23:42 +0000
+Received: from buildd by fasch.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at fasch.debian.org>)
+ id 1SNBYj-000Dwj-G8; Wed, 25 Apr 2012 23:23:41 +0000
+Message-Id: <E1SNBYj-000Dwj-G8 at fasch.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 10 May 2011 11:17:20 +0000
-From: buildd on fano <buildd at fano.debian.org>
+Date: Wed, 25 Apr 2012 23:23:41 +0000
+From: buildd on fasch <buildd at fasch.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on kfreebsd-amd64 (dist=sid)
-Key-Id: 91116966
+Subject: Log for successful build of tabix_0.2.5-2 on kfreebsd-amd64 (dist=sid)
+Key-Id: 94C0145B
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fano.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fasch.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (kfreebsd-amd64) 10 May 2011 11:16 ║
+║ tabix 0.2.5-2 (kfreebsd-amd64) 25 Apr 2012 23:20 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: kfreebsd-amd64
-Hit http://mirror-ubc.debian.org sid InRelease
-Hit http://mirror-ubc.debian.org sid/main Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid InRelease
+Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://mirror-ubc.debian.org sid/contrib Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Ign http://mirror-ubc.debian.org sid/contrib TranslationIndex
-Hit http://mirror-ubc.debian.org sid/main TranslationIndex
-Ign http://mirror-ubc.debian.org sid/non-free TranslationIndex
+Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://ftp.gr.debian.org sid/main Translation-en/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Translation-en/DiffIndex
Get:1 http://incoming.debian.org Release.gpg [836 B]
-Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages
-Ign http://mirror-ubc.debian.org sid/contrib Translation-en
-Ign http://mirror-ubc.debian.org sid/non-free Translation-en
-Get:2 http://incoming.debian.org Release [1604 B]
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
Hit http://incoming.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
Hit http://incoming.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Ign http://incoming.debian.org sid/non-free TranslationIndex
-Get:3 http://incoming.debian.org Sources [27.9 kB]
-Get:4 http://incoming.debian.org Packages [545 kB]
+Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/non-free Translation-en/DiffIndex
+Get:2 http://incoming.debian.org Release [1601 B]
Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages
+Get:3 http://incoming.debian.org Sources [30.7 kB]
+Get:4 http://incoming.debian.org Packages [479 kB]
Ign http://incoming.debian.org Translation-en
-Ign http://incoming.debian.org sid/contrib Translation-en
-Ign http://incoming.debian.org sid/non-free Translation-en
-Fetched 575 kB in 4s (119 kB/s)
+Fetched 512 kB in 5s (92.5 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -91,11 +87,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (95.1 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 1s (52.1 kB/s)
Download complete and in download only mode
Check arch
@@ -109,147 +105,143 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1)
-freebsd-utils: already installed (8.1-4+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+freebsd-utils: already installed (9.0+ds1-3)
+grep: already installed (2.11-3)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
file gettext gettext-base groff-base html2text intltool-debian libcroco3
- libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db
+ libffi5 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2 man-db
po-debconf
Suggested packages:
- devscripts dh-make gettext-doc groff less www-browser libmail-box-perl
+ dh-make gettext-doc groff less www-browser libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
+ debhelper file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2
+ man-db po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
-Need to get 0 B/9211 kB of archives.
-After this operation, 25.8 MB of additional disk space will be used.
-Selecting previously deselected package groff-base.
-(Reading database ... 12270 files and directories currently installed.)
-Unpacking groff-base (from .../groff-base_1.21-5_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package html2text.
+0 upgraded, 17 newly installed, 0 to remove and 1 not upgraded.
+Need to get 0 B/9555 kB of archives.
+After this operation, 23.7 MB of additional disk space will be used.
+Selecting previously unselected package libpipeline1:kfreebsd-amd64.
+(Reading database ... 11518 files and directories currently installed.)
+Unpacking libpipeline1:kfreebsd-amd64 (from .../libpipeline1_1.2.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-amd64.
+Unpacking libmagic1:kfreebsd-amd64 (from .../libmagic1_5.11-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxml2:kfreebsd-amd64.
+Unpacking libxml2:kfreebsd-amd64 (from .../libxml2_2.7.8.dfsg-9_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libffi5:kfreebsd-amd64.
+Unpacking libffi5:kfreebsd-amd64 (from .../libffi5_3.0.10-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libglib2.0-0:kfreebsd-amd64.
+Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.32.0-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libcroco3:kfreebsd-amd64.
+Unpacking libcroco3:kfreebsd-amd64 (from .../libcroco3_0.6.5-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-amd64.
+Unpacking libunistring0:kfreebsd-amd64 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-amd64.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_kfreebsd-amd64.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_kfreebsd-amd64.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_kfreebsd-amd64.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_kfreebsd-amd64.deb) ...
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:kfreebsd-amd64.
+Unpacking zlib1g-dev:kfreebsd-amd64 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-amd64.deb) ...
+Setting up libpipeline1:kfreebsd-amd64 (1.2.1-1) ...
+Setting up libmagic1:kfreebsd-amd64 (5.11-1) ...
+Setting up libxml2:kfreebsd-amd64 (2.7.8.dfsg-9) ...
+Setting up libffi5:kfreebsd-amd64 (3.0.10-3) ...
+Setting up libglib2.0-0:kfreebsd-amd64 (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:kfreebsd-amd64 (0.6.5-1) ...
+Setting up libunistring0:kfreebsd-amd64 (0.9.3-5) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:kfreebsd-amd64 (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
Kernel: GNU/kFreeBSD 8.1-1-amd64 kfreebsd-amd64 (x86_64)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1 freebsd-utils_8.1-4+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc0.1_2.13-2 libc0.1-dev_2.13-2 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libedit2_2.11-20080614-2 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-7 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 type-handling_0.2.23 tzdata_2011g-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-3 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-3 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc0.1_2.13-30 libc0.1-dev_2.13-30 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libgssglue1_0.3-4 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libprocps0_1:3.3.2-3 libquadmath0_4.7.0-4 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-9 libss2_1.42.2-2 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 type-handling_0.2.23 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -260,12 +252,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -274,144 +268,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-amd64
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.1 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_kfreebsd-amd64.deb'.
- dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org> >../tabix_0.2.5-1_kfreebsd-amd64.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.1 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_kfreebsd-amd64.deb'.
+ dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org> >../tabix_0.2.5-2_kfreebsd-amd64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1117
+Build finished at 20120425-2322
-tabix_0.2.5-1_kfreebsd-amd64.changes:
+tabix_0.2.5-2_kfreebsd-amd64.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: kfreebsd-amd64
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: kfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- ed6acb903f82482a3836f2bb24c23c85e23b1d6b 58136 tabix_0.2.5-1_kfreebsd-amd64.deb
+ 6c50b21ef399922a14530fdb57250d4fec5c25f5 58752 tabix_0.2.5-2_kfreebsd-amd64.deb
Checksums-Sha256:
- 866b51cc8b257ef7fa2df23b1e3c052f1bc499caa5e90b75481e10eafc4a32d7 58136 tabix_0.2.5-1_kfreebsd-amd64.deb
+ 8a8e99941f3c0f5ab3321f4ead39b5e61533820ba9ec8e97c0a4b45df251f462 58752 tabix_0.2.5-2_kfreebsd-amd64.deb
Files:
- 7bf68fdc4354fc2c7b0fad4c76bd58b8 58136 science optional tabix_0.2.5-1_kfreebsd-amd64.deb
+ b328daef86f497bda2d658994581d16a 58752 science optional tabix_0.2.5-2_kfreebsd-amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_kfreebsd-amd64.deb
+tabix_0.2.5-2_kfreebsd-amd64.deb
────────────────────────────────
new debian package, version 2.0.
- size 58136 bytes: control archive= 1003 bytes.
- 796 bytes, 16 lines control
+ size 58752 bytes: control archive= 997 bytes.
+ 791 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: kfreebsd-amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 132
- Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 111
+ Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -423,26 +439,26 @@ tabix_0.2.5-1_kfreebsd-amd64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/bin/
+-rwxr-xr-x root/root 66400 2012-04-25 23:22 ./usr/bin/tabix
+-rwxr-xr-x root/root 26344 2012-04-25 23:22 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 65440 2011-05-10 11:17 ./usr/bin/tabix
--rwxr-xr-x root/root 25784 2011-05-10 11:17 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 23:22 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -456,22 +472,21 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ka-sbuild-1305026168-54528/build/buildd-tabix_0.2.5-1-kfreebsd-amd64-a2zj5U
+Purging /var/lib/schroot/mount/sid-ka-sbuild-1335396042-52154/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
- cdbs* debhelper* file* gettext* gettext-base* groff-base* html2text*
- intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3* libpipeline1*
+ debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libcroco3* libffi5* libglib2.0-0* libmagic1* libpipeline1*
libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 18 to remove and 0 not upgraded.
-After this operation, 25.8 MB disk space will be freed.
-(Reading database ... 13550 files and directories currently installed.)
-Removing cdbs ...
+0 upgraded, 0 newly installed, 17 to remove and 1 not upgraded.
+After this operation, 23.7 MB disk space will be freed.
+(Reading database ... 12803 files and directories currently installed.)
Removing debhelper ...
Removing file ...
Removing po-debconf ...
@@ -484,39 +499,39 @@ Removing groff-base ...
Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing zlib1g-dev ...
+Removing libcroco3:kfreebsd-amd64 ...
+Purging configuration files for libcroco3:kfreebsd-amd64 ...
+Removing libglib2.0-0:kfreebsd-amd64 ...
+Purging configuration files for libglib2.0-0:kfreebsd-amd64 ...
+Removing libffi5:kfreebsd-amd64 ...
+Purging configuration files for libffi5:kfreebsd-amd64 ...
+Removing libmagic1:kfreebsd-amd64 ...
+Purging configuration files for libmagic1:kfreebsd-amd64 ...
+Removing libpipeline1:kfreebsd-amd64 ...
+Purging configuration files for libpipeline1:kfreebsd-amd64 ...
+Removing libunistring0:kfreebsd-amd64 ...
+Purging configuration files for libunistring0:kfreebsd-amd64 ...
+Removing libxml2:kfreebsd-amd64 ...
+Purging configuration files for libxml2:kfreebsd-amd64 ...
+Removing zlib1g-dev:kfreebsd-amd64 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-amd64
-Build-Space: 1622
-Build-Time: 15
+Build-Space: 1702
+Build-Time: 13
Distribution: sid
-Install-Time: 31
-Job: tabix_0.2.5-1
+Install-Time: 83
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 58
-Source-Version: 0.2.5-1
-Space: 1622
+Package-Time: 122
+Source-Version: 0.2.5-2
+Space: 1702
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1117
-Build needed 00:00:58, 1622k disc space
-Signature with key '91116966' requested:
+Finished at 20120425-2322
+Build needed 00:02:02, 1702k disc space
+Signature with key '94C0145B' requested:
diff --git a/kfreebsd-i386.log b/kfreebsd-i386.log
index fdfcfaa..d452cbf 100644
--- a/kfreebsd-i386.log
+++ b/kfreebsd-i386.log
@@ -1,74 +1,63 @@
-From buildd at field.debian.org Tue May 10 11:16:57 2011
-Return-path: <buildd at field.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+From buildd at finzi.debian.org Wed Apr 25 21:18:40 2012
+Return-path: <buildd at finzi.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at field.debian.org>)
- id 1QJkvx-0006Ik-Jq
- for logs at buildd.debian.org; Tue, 10 May 2011 11:16:57 +0000
-Received: from field.debian.org ([194.177.211.210])
+ (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
+ id 1SN9bk-0003ng-5Q
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:18:40 +0000
+Received: from finzi.debian.org ([206.12.19.111])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=field.debian.org, EMAIL=hostmaster at field.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at field.debian.org>)
- id 1QJkvz-0003ce-Js; Tue, 10 May 2011 11:16:59 +0000
-Received: from buildd by field.debian.org with local (Exim 4.72)
- (envelope-from <buildd at field.debian.org>)
- id 1QJkvv-0003GH-ET; Tue, 10 May 2011 11:16:55 +0000
-Message-Id: <E1QJkvv-0003GH-ET at field.debian.org>
+ CN=finzi.debian.org, EMAIL=hostmaster at finzi.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
+ id 1SN9bi-0006NV-Mq; Wed, 25 Apr 2012 21:18:39 +0000
+Received: from buildd by finzi.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at finzi.debian.org>)
+ id 1SN9bU-000D9l-Kn; Wed, 25 Apr 2012 21:18:24 +0000
+Message-Id: <E1SN9bU-000D9l-Kn at finzi.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 10 May 2011 11:16:55 +0000
-From: buildd on field <buildd at field.debian.org>
+Date: Wed, 25 Apr 2012 21:18:24 +0000
+From: buildd on finzi <buildd at finzi.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on kfreebsd-i386 (dist=sid)
-Key-Id: 22C61858
+Subject: Log for successful build of tabix_0.2.5-2 on kfreebsd-i386 (dist=sid)
+Key-Id: B3DA9773
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on field.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on finzi.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (kfreebsd-i386) 10 May 2011 11:14 ║
+║ tabix 0.2.5-2 (kfreebsd-i386) 25 Apr 2012 21:17 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: kfreebsd-i386
-Hit http://ftp.gr.debian.org sid InRelease
-Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
+Hit http://mirror-ubc.debian.org sid InRelease
+Hit http://mirror-ubc.debian.org sid/main Sources
+Hit http://mirror-ubc.debian.org sid/contrib Sources
+Hit http://mirror-ubc.debian.org sid/main kfreebsd-i386 Packages
+Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-i386 Packages
+Hit http://mirror-ubc.debian.org sid/contrib Translation-en
+Hit http://mirror-ubc.debian.org sid/main Translation-en
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
-Ign http://ftp.gr.debian.org sid/contrib TranslationIndex
-Hit http://ftp.gr.debian.org sid/main TranslationIndex
-Ign http://ftp.gr.debian.org sid/non-free TranslationIndex
-Get:1 http://incoming.debian.org Release.gpg [836 B]
-Ign http://ftp.gr.debian.org sid/contrib Translation-en
-Ign http://ftp.gr.debian.org sid/non-free Translation-en
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
-Hit http://incoming.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
-Hit http://incoming.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Ign http://incoming.debian.org sid/non-free TranslationIndex
-Get:2 http://incoming.debian.org Release [1604 B]
-Get:3 http://incoming.debian.org Sources [27.9 kB]
-Get:4 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org sid/contrib Translation-en
-Ign http://incoming.debian.org sid/non-free Translation-en
+Hit http://incoming.debian.org Release.gpg
+Hit http://incoming.debian.org sid/main Sources
+Hit http://incoming.debian.org sid/contrib Sources
+Hit http://incoming.debian.org sid/main kfreebsd-i386 Packages
+Hit http://incoming.debian.org sid/contrib kfreebsd-i386 Packages
+Hit http://incoming.debian.org sid/contrib Translation-en
+Hit http://incoming.debian.org sid/main Translation-en
+Hit http://incoming.debian.org Release
+Hit http://incoming.debian.org Sources
+Hit http://incoming.debian.org Packages
Ign http://incoming.debian.org Translation-en
-Fetched 575 kB in 6s (94.1 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -89,11 +78,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (60.2 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (104 kB/s)
Download complete and in download only mode
Check arch
@@ -107,147 +96,152 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1)
-freebsd-utils: already installed (8.1-4)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+freebsd-utils: already installed (9.0+ds1-3)
+grep: already installed (2.11-3)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- file gettext gettext-base groff-base html2text intltool-debian libcroco3
- libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db
- po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- devscripts dh-make gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
-Need to get 0 B/8780 kB of archives.
-After this operation, 24.6 MB of additional disk space will be used.
-Selecting previously deselected package groff-base.
-(Reading database ... 12213 files and directories currently installed.)
-Unpacking groff-base (from .../groff-base_1.21-5_kfreebsd-i386.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_kfreebsd-i386.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_kfreebsd-i386.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_kfreebsd-i386.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_kfreebsd-i386.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_kfreebsd-i386.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_kfreebsd-i386.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_kfreebsd-i386.deb) ...
-Selecting previously deselected package html2text.
+0 upgraded, 19 newly installed, 0 to remove and 2 not upgraded.
+Need to get 0 B/9854 kB of archives.
+After this operation, 24.0 MB of additional disk space will be used.
+Selecting previously unselected package libpipeline1:kfreebsd-i386.
+(Reading database ... 11447 files and directories currently installed.)
+Unpacking libpipeline1:kfreebsd-i386 (from .../libpipeline1_1.2.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-i386.
+Unpacking libmagic1:kfreebsd-i386 (from .../libmagic1_5.11-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpcre3:kfreebsd-i386.
+Unpacking libpcre3:kfreebsd-i386 (from .../libpcre3_1%3a8.30-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxml2:kfreebsd-i386.
+Unpacking libxml2:kfreebsd-i386 (from .../libxml2_2.7.8.dfsg-9_kfreebsd-i386.deb) ...
+Selecting previously unselected package libffi5:kfreebsd-i386.
+Unpacking libffi5:kfreebsd-i386 (from .../libffi5_3.0.10-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libglib2.0-0:kfreebsd-i386.
+Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.32.0-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libcroco3:kfreebsd-i386.
+Unpacking libcroco3:kfreebsd-i386 (from .../libcroco3_0.6.5-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-i386.
+Unpacking libunistring0:kfreebsd-i386 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_kfreebsd-i386.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-i386.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-i386.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-i386.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_kfreebsd-i386.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_kfreebsd-i386.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_kfreebsd-i386.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_kfreebsd-i386.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_kfreebsd-i386.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_kfreebsd-i386.deb) ...
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:kfreebsd-i386.
+Unpacking zlib1g-dev:kfreebsd-i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-i386.deb) ...
+Setting up libpipeline1:kfreebsd-i386 (1.2.1-1) ...
+Setting up libmagic1:kfreebsd-i386 (5.11-1) ...
+Setting up libpcre3:kfreebsd-i386 (1:8.30-4) ...
+Setting up libxml2:kfreebsd-i386 (2.7.8.dfsg-9) ...
+Setting up libffi5:kfreebsd-i386 (3.0.10-3) ...
+Setting up libglib2.0-0:kfreebsd-i386 (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:kfreebsd-i386 (0.6.5-1) ...
+Setting up libunistring0:kfreebsd-i386 (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:kfreebsd-i386 (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
Checking correctness of dependencies...
-Kernel: GNU/kFreeBSD 8.1-1-686-smp kfreebsd-i386 (i686)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 kfreebsd-kernel-headers_0.53 libc0.1-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1 freebsd-utils_8.1-4 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.4-base_4.4.6-3 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 kfreebsd-kernel-headers_0.53 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbsd0_0.2.0-1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc0.1_2.13-2 libc0.1-dev_2.13-2 libcam0_8.1-5 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb4.8_4.8.30-8 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libedit2_2.11-20080614-2 libexpat1_2.0.1-7 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgcrypt11_1.4.6-5 libgdbm3_1.8.3-9 libgeom0_8.1-5 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgnutls26_2.10.5-1+b1 libgomp1_4.6.0-7 libgpg-error0_1.10-0.3 libkiconv4_8.1-5 libkvm0_8.1-5 libldap-2.4-2_2.4.25-1+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libncursesw5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libpng12-0_1.2.44-2 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libquadmath0_4.6.0-7 libreadline6_6.1-3 libsasl2-2_2.1.23.dfsg1-8 libsbuf0_8.1-5 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtasn1-3_2.9-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 lzma_4.43-14 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 ncurses-base_5.9-1 ncurses-bin_5.9-1 netbase_4.45 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 procps_1:3.2.8-10 psmisc_22.13-1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 type-handling_0.2.23 tzdata_2011g-1 ufsutils_7.3-1+b1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: GNU/kFreeBSD 8.1-1-686 kfreebsd-i386 (i686)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-3 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-3 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc0.1_2.13-30 libc0.1-dev_2.13-30 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libgssglue1_0.3-4 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libquadmath0_4.7.0-4 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -258,12 +252,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -272,144 +268,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-i386
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.1 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_kfreebsd-i386.deb'.
- dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org> >../tabix_0.2.5-1_kfreebsd-i386.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.1 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_kfreebsd-i386.deb'.
+ dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../tabix_0.2.5-2_kfreebsd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1116
+Build finished at 20120425-2118
-tabix_0.2.5-1_kfreebsd-i386.changes:
+tabix_0.2.5-2_kfreebsd-i386.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: kfreebsd-i386
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: kfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 231dfe225f2d7dafa1b2a0d4071052c89914fc8c 59940 tabix_0.2.5-1_kfreebsd-i386.deb
+ 8d0fdde0a0ef77d883779e9992eca9dae7f2ff02 62634 tabix_0.2.5-2_kfreebsd-i386.deb
Checksums-Sha256:
- fe509f91840fcd637679206ceea2857af99f4f04a3a02a4e7ef2ae9c1d51ee7d 59940 tabix_0.2.5-1_kfreebsd-i386.deb
+ f5d30ecff5d6e46f855a0cc4939ea6c0772ca282c20c961badfa0edb992cadde 62634 tabix_0.2.5-2_kfreebsd-i386.deb
Files:
- 212a37c3e9f31354cfa2e35de19c88d5 59940 science optional tabix_0.2.5-1_kfreebsd-i386.deb
+ d68e87a7e460fb821385fa46a80fb23e 62634 science optional tabix_0.2.5-2_kfreebsd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_kfreebsd-i386.deb
+tabix_0.2.5-2_kfreebsd-i386.deb
───────────────────────────────
new debian package, version 2.0.
- size 59940 bytes: control archive= 1001 bytes.
- 795 bytes, 16 lines control
+ size 62634 bytes: control archive= 999 bytes.
+ 790 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: kfreebsd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 134
- Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 115
+ Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -421,26 +439,26 @@ tabix_0.2.5-1_kfreebsd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/bin/
+-rwxr-xr-x root/root 71712 2012-04-25 21:18 ./usr/bin/tabix
+-rwxr-xr-x root/root 25852 2012-04-25 21:18 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:16 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/bin/
--rwxr-xr-x root/root 68156 2011-05-10 11:16 ./usr/bin/tabix
--rwxr-xr-x root/root 24104 2011-05-10 11:16 ./usr/bin/bgzip
-lrwxr-xr-x root/root 0 2011-05-10 11:16 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:18 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -454,67 +472,70 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ki-sbuild-1305026071-10843/build/buildd-tabix_0.2.5-1-kfreebsd-i386-knJqsW
+Purging /var/lib/schroot/mount/sid-ki-sbuild-1335388622-49480/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
- cdbs* debhelper* file* gettext* gettext-base* groff-base* html2text*
- intltool-debian* libcroco3* libglib2.0-0* libmagic1* libpcre3* libpipeline1*
- libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 18 to remove and 0 not upgraded.
-After this operation, 24.6 MB disk space will be freed.
-(Reading database ... 13493 files and directories currently installed.)
-Removing cdbs ...
+ bsdmainutils* debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libcroco3* libffi5* libglib2.0-0* libmagic1* libpcre3*
+ libpipeline1* libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 19 to remove and 2 not upgraded.
+After this operation, 24.0 MB disk space will be freed.
+(Reading database ... 12852 files and directories currently installed.)
Removing debhelper ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing bsdmainutils ...
+Purging configuration files for bsdmainutils ...
Removing file ...
Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
-Removing man-db ...
-Purging configuration files for man-db ...
Removing groff-base ...
Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing zlib1g-dev ...
+Removing libcroco3:kfreebsd-i386 ...
+Purging configuration files for libcroco3:kfreebsd-i386 ...
+Removing libglib2.0-0:kfreebsd-i386 ...
+Purging configuration files for libglib2.0-0:kfreebsd-i386 ...
+Removing libffi5:kfreebsd-i386 ...
+Purging configuration files for libffi5:kfreebsd-i386 ...
+Removing libmagic1:kfreebsd-i386 ...
+Purging configuration files for libmagic1:kfreebsd-i386 ...
+Removing libpcre3:kfreebsd-i386 ...
+Purging configuration files for libpcre3:kfreebsd-i386 ...
+Removing libpipeline1:kfreebsd-i386 ...
+Purging configuration files for libpipeline1:kfreebsd-i386 ...
+Removing libunistring0:kfreebsd-i386 ...
+Purging configuration files for libunistring0:kfreebsd-i386 ...
+Removing libxml2:kfreebsd-i386 ...
+Purging configuration files for libxml2:kfreebsd-i386 ...
+Removing zlib1g-dev:kfreebsd-i386 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-i386
-Build-Space: 1292
+Build-Space: 1386
Build-Time: 15
Distribution: sid
-Install-Time: 73
-Job: tabix_0.2.5-1
+Install-Time: 37
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 108
-Source-Version: 0.2.5-1
-Space: 1292
+Package-Time: 64
+Source-Version: 0.2.5-2
+Space: 1386
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1116
-Build needed 00:01:48, 1292k disc space
-Signature with key '22C61858' requested:
+Finished at 20120425-2118
+Build needed 00:01:04, 1386k disc space
+Signature with key 'B3DA9773' requested:
diff --git a/mips.log b/mips.log
index 60f7df8..73b4a12 100644
--- a/mips.log
+++ b/mips.log
@@ -1,67 +1,69 @@
-From buildd at ball.debian.org Tue May 10 11:18:19 2011
+From buildd at ball.debian.org Wed Apr 25 21:47:57 2012
Return-path: <buildd at ball.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ball.debian.org>)
- id 1QJkxH-0006W8-A8
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:19 +0000
+ id 1SNA45-0008GF-0t
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:47:57 +0000
Received: from ball.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d09])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=ball.debian.org, EMAIL=hostmaster at ball.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ball.debian.org>)
- id 1QJkxG-00077s-6x
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:18 +0000
-Received: from buildd by ball.debian.org with local (Exim 4.69)
+ id 1SNA44-000889-3S
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:47:56 +0000
+Received: from buildd by ball.debian.org with local (Exim 4.72)
(envelope-from <buildd at ball.debian.org>)
- id 1QJkxF-0005YD-Cg; Tue, 10 May 2011 11:18:17 +0000
+ id 1SNA43-00006a-I1; Wed, 25 Apr 2012 21:47:55 +0000
+Date: Wed, 25 Apr 2012 21:47:55 +0000
+Message-Id: <E1SNA43-00006a-I1 at ball.debian.org>
From: buildd on ball <buildd at ball.debian.org>
To: logs at buildd.debian.org,buildd-porters at ball.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on mips (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-2 on mips (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1QJkxF-0005YD-Cg at ball.debian.org>
-Date: Tue, 10 May 2011 11:18:17 +0000
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ball.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (mips) 10 May 2011 11:13 ║
+║ tabix 0.2.5-2 (mips) 25 Apr 2012 21:42 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: mips
-Get:1 http://ftp.de.debian.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [5657 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [51.4 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.1 kB]
-Get:8 http://ftp.de.debian.org unstable/main mips Packages [7083 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib mips Packages [54.8 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
+Get:8 http://ftp.de.debian.org unstable/main mips Packages [5785 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib mips Packages [37.3 kB]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://ftp.de.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main mips Packages [7083 kB]
-Get:14 http://incoming.debian.org unstable/contrib mips Packages [54.8 kB]
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main mips Packages [5785 kB]
+Get:16 http://incoming.debian.org unstable/contrib mips Packages [37.3 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:21 http://incoming.debian.org Sources [31.5 kB]
+Get:22 http://incoming.debian.org Packages [498 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 26.8 MB in 59s (454 kB/s)
+Fetched 33.4 MB in 1min 31s (364 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -82,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (104 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (101 kB/s)
Download complete and in download only mode
Check arch
@@ -100,173 +102,179 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 75 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 75 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.2)
-e2fsprogs: already installed (1.41.12-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.5)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3)
+dash: already installed (0.5.7-2)
+debianutils: already installed (4.1)
+diffutils: already installed (1:3.2-1)
+dpkg: already installed (1.16.1.2)
+e2fsprogs: already installed (1.42-1)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-2)
+hostname: already installed (3.10)
+ncurses-base: already installed (5.9-4)
+ncurses-bin: already installed (5.9-4)
+perl-base: already installed (5.14.2-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+sysvinit-utils: already installed (2.88dsf-18)
+sysvinit: already installed (2.88dsf-18)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-1.2)
+mount: already installed (2.20.1-1.2)
+util-linux: already installed (2.20.1-1.2)
+libc6-dev: already installed (2.13-24)
+gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
-cdbs: missing
+dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf zlib1g
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 26 not upgraded.
-Need to get 9245 kB of archives.
-After this operation, 29.7 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 8.2.2 [210 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-5 [1203 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mips 1.2.0-1 [35.7 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.0.2-1 [1005 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.04-5+b1 [239 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main file mips 5.04-5+b1 [49.9 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-3 [153 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 8.12-3 [262 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-2+b1 [837 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.28.6-1 [1509 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.2-1 [110 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-4 [415 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-3 [2037 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.3.4.dfsg-3 [191 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 19 newly installed, 0 to remove and 74 not upgraded.
+Need to get 9891 kB of archives.
+After this operation, 26.7 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main zlib1g mips 1:1.2.6.dfsg-2 [85.3 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mips 1.2.1-1 [36.7 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.11-1 [253 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 1:8.30-4 [244 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-9 [860 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libffi5 mips 3.0.10-3 [23.0 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.32.0-4 [1968 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.5-1 [140 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 9.0.1 [207 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-7 [1154 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.1-2 [1024 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main file mips 5.11-1 [53.2 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-5 [136 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-5 [2032 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.6.dfsg-2 [211 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9245 kB in 1s (7081 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 11381 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mips.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_mips.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mips.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_mips.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mips.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_mips.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mips.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_mips.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mips.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9891 kB in 2s (4741 kB/s)
+(Reading database ... 10640 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_mips.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.6.dfsg-2) ...
+Selecting previously unselected package libpipeline1.
+(Reading database ... 10640 files and directories currently installed.)
+Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mips.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mips.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_mips.deb) ...
+Selecting previously unselected package libxml2.
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-9_mips.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_mips.deb) ...
+Selecting previously unselected package libglib2.0-0.
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-4_mips.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mips.deb) ...
+Selecting previously unselected package libunistring0.
+Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mips.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mips.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_mips.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_mips.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_mips.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mips.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mips.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mips.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mips.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mips.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_mips.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_mips.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mips.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev.
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mips.deb) ...
+Setting up libpipeline1 (1.2.1-1) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-4) ...
+Setting up libxml2 (2.7.8.dfsg-9) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3 (0.6.5-1) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32.2-dsa-mips-swarm mips (mips64)
-Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mips (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-12 gcc-4.6_4.6.2-12 libc6-dev_2.13-24 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 linux-libc-dev_3.2.1-2
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-12 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.2-12 gcc_4:4.6.2-4 gcc-4.6_4.6.2-12 gcc-4.6-base_4.6.2-12 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-18 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-24 libc-dev-bin_2.13-24 libc6_2.13-24 libc6-dev_2.13-24 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-12 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-12 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libss2_1.42-1 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.1-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-24 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-6 perl-base_5.14.2-6 perl-modules_5.14.2-6 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-3 sysv-rc_2.88dsf-18 sysvinit_2.88dsf-18 sysvinit-utils_2.88dsf-18 tar_1.26-4 tzdata_2011n-2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -276,14 +284,15 @@ Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -292,157 +301,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mips
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-dh_clean
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+ dh_clean
debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+dh build
+ dh_testdir
+ dh_auto_configure
+ dh_auto_build
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mips-y1nWwN/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+ dh_auto_test
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mips.deb'.
- dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../tabix_0.2.5-1_mips.changes
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mips.deb'.
+ dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../tabix_0.2.5-2_mips.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1118
+Build finished at 20120425-2147
-tabix_0.2.5-1_mips.changes:
+tabix_0.2.5-2_mips.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: mips
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: Debian Build Daemon <buildd_mips-ball at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 78f21916fd7710f2235bfd39fcfcc81e674f6cc3 56214 tabix_0.2.5-1_mips.deb
+ e622de78f815e260bf36563866ce218b0683ac68 65122 tabix_0.2.5-2_mips.deb
Checksums-Sha256:
- 09a836ba92aceb7309faa516563ae681851756e82cdbf9285f17bd629617903d 56214 tabix_0.2.5-1_mips.deb
+ f6cb12c29c621c9110550f435a22e7b789bb96a308579d586663fa654de925a6 65122 tabix_0.2.5-2_mips.deb
Files:
- 3d6707d56e3b8230d5ce62bc3f6cb1c9 56214 science optional tabix_0.2.5-1_mips.deb
+ 9c5e859543d7d827d8d8ef5e44d2741d 65122 science optional tabix_0.2.5-2_mips.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_mips.deb
+tabix_0.2.5-2_mips.deb
──────────────────────
new debian package, version 2.0.
- size 56214 bytes: control archive= 993 bytes.
- 784 bytes, 16 lines control
+ size 65122 bytes: control archive= 989 bytes.
+ 779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: mips
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 176
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 162
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -454,26 +472,26 @@ tabix_0.2.5-1_mips.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 25792 2011-05-10 11:17 ./usr/bin/bgzip
--rwxr-xr-x root/root 73376 2011-05-10 11:17 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:47 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/bin/
+-rwxr-xr-x root/root 28556 2012-04-25 21:47 ./usr/bin/bgzip
+-rwxr-xr-x root/root 81264 2012-04-25 21:47 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2012-04-25 21:47 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -487,7 +505,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mips-sbuild-29525b66-d96d-4648-a4c9-8ff907fbbca4/build/buildd-tabix_0.2.5-1-mips-y1nWwN
+Purging /var/lib/schroot/mount/sid-mips-sbuild-3e08ff28-ab93-43c3-bc7b-4bd9e30612f4/build/buildd-tabix_0.2.5-2-mips-VnUYYZ
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -495,86 +513,84 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mips
-Build-Space: 1480
-Build-Time: 78
+Build-Space: 1604
+Build-Time: 63
Distribution: sid
-Install-Time: 85
-Job: tabix_0.2.5-1
+Install-Time: 102
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 291
-Source-Version: 0.2.5-1
-Space: 1480
+Package-Time: 336
+Source-Version: 0.2.5-2
+Space: 1604
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1118
-Build needed 00:04:51, 1480k disc space
-Signature with key '40E097C5' requested:
+Finished at 20120425-2147
+Build needed 00:05:36, 1604k disc space
+Signature with key 'E348DA45' requested:
-From buildd at rem.debian.org Tue May 10 11:18:52 2011
-Return-path: <buildd at rem.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at eysler.debian.org Thu Apr 26 01:28:13 2012
+Return-path: <buildd at eysler.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
- id 1QJkxo-0006cE-2H
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:52 +0000
-Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SNDVF-0008Tj-Bt
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:13 +0000
+Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
- id 1QJkxm-000785-QL
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:51 +0000
-Received: from buildd by rem.debian.org with local (Exim 4.72)
- (envelope-from <buildd at rem.debian.org>) id 1QJkxm-0008Qs-5X
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-Date: Tue, 10 May 2011 11:18:50 +0000
-Message-Id: <E1QJkxm-0008Qs-5X at rem.debian.org>
-From: buildd on rem <buildd at rem.debian.org>
+ CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SNDVD-0002lS-S8
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:11 +0000
+Received: from buildd by eysler.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at eysler.debian.org>) id 1SNDVC-0008I0-Pz
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:10 +0000
+Date: Thu, 26 Apr 2012 01:28:10 +0000
+Message-Id: <E1SNDVC-0008I0-Pz at eysler.debian.org>
+From: buildd on eysler <buildd at eysler.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on mipsel (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-2 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (mipsel) 10 May 2011 11:15 ║
+║ tabix 0.2.5-2 (mipsel) 26 Apr 2012 01:22 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: mipsel
-Get:1 http://mirror.ayous.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://mirror.ayous.org unstable/main Sources [5657 kB]
+Get:1 http://ftp.at.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.at.debian.org unstable/main Sources [6244 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:6 http://mirror.ayous.org unstable/contrib Sources [51.4 kB]
-Get:7 http://mirror.ayous.org unstable/non-free Sources [97.1 kB]
-Get:8 http://mirror.ayous.org unstable/main mipsel Packages [7094 kB]
-Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [54.8 kB]
-Ign http://mirror.ayous.org unstable/contrib TranslationIndex
-Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
-Ign http://mirror.ayous.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main mipsel Packages [7094 kB]
-Get:14 http://incoming.debian.org unstable/contrib mipsel Packages [54.8 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:7 http://ftp.at.debian.org unstable/contrib Sources [53.9 kB]
+Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.9 kB]
+Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5816 kB]
+Get:10 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Get:11 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.at.debian.org unstable/main Translation-en [3943 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main mipsel Packages [5816 kB]
+Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:19 http://incoming.debian.org Sources [26.7 kB]
+Get:20 http://incoming.debian.org Packages [398 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 26.8 MB in 47s (560 kB/s)
+Fetched 33.3 MB in 2min 0s (276 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -595,11 +611,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (102 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (85.6 kB/s)
Download complete and in download only mode
Check arch
@@ -613,173 +629,172 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.2)
-e2fsprogs: already installed (1.41.12-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.11-3)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
-cdbs: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 17 not upgraded.
-Need to get 9167 kB of archives.
-After this operation, 29.7 MB of additional disk space will be used.
-Get:1 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 8.2.2 [207 kB]
-Get:2 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-5 [1154 kB]
-Get:3 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.0-1 [35.1 kB]
-Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.2-1 [1008 kB]
-Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5+b1 [238 kB]
-Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5+b1 [49.9 kB]
-Get:7 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-3 [152 kB]
-Get:8 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 8.12-3 [262 kB]
-Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2+b1 [832 kB]
-Get:10 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:11 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.6-1 [1503 kB]
-Get:12 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
-Get:13 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-4 [411 kB]
-Get:14 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
-Get:15 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://mirror.ayous.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://mirror.ayous.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 1 not upgraded.
+Need to get 9717 kB of archives.
+After this operation, 26.7 MB of additional disk space will be used.
+Get:1 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:2 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:3 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
+Get:4 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
+Get:5 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:6 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-4 [1959 kB]
+Get:7 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:8 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:9 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:10 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:11 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:12 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:13 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
+Get:14 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:15 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
+Get:16 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9167 kB in 1s (8368 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 11389 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mipsel.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_mipsel.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mipsel.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_mipsel.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mipsel.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_mipsel.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mipsel.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_mipsel.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mipsel.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9717 kB in 3s (2640 kB/s)
+Selecting previously unselected package libpipeline1:mipsel.
+(Reading database ... 10748 files and directories currently installed.)
+Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
+Selecting previously unselected package libmagic1:mipsel.
+Unpacking libmagic1:mipsel (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3:mipsel.
+Unpacking libpcre3:mipsel (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
+Selecting previously unselected package libxml2:mipsel.
+Unpacking libxml2:mipsel (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
+Selecting previously unselected package libffi5:mipsel.
+Unpacking libffi5:mipsel (from .../libffi5_3.0.10-3_mipsel.deb) ...
+Selecting previously unselected package libglib2.0-0:mipsel.
+Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.32.0-4_mipsel.deb) ...
+Selecting previously unselected package libcroco3:mipsel.
+Unpacking libcroco3:mipsel (from .../libcroco3_0.6.5-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0:mipsel.
+Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_mipsel.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1_mipsel.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mipsel.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mipsel.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mipsel.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_mipsel.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_mipsel.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mipsel.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:mipsel.
+Unpacking zlib1g-dev:mipsel (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
+Setting up libpipeline1:mipsel (1.2.1-1) ...
+Setting up libmagic1:mipsel (5.11-1) ...
+Setting up libpcre3:mipsel (1:8.30-4) ...
+Setting up libxml2:mipsel (2.7.8.dfsg-9) ...
+Setting up libffi5:mipsel (3.0.10-3) ...
+Setting up libglib2.0-0:mipsel (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:mipsel (0.6.5-1) ...
+Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:mipsel (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
-Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-2 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -790,12 +805,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -804,144 +821,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-1_mipsel.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../tabix_0.2.5-2_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1118
+Build finished at 20120426-0128
-tabix_0.2.5-1_mipsel.changes:
+tabix_0.2.5-2_mipsel.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- cb9248273b05e891d21ccddb8437d851eea2b26f 56558 tabix_0.2.5-1_mipsel.deb
+ ba1e99cd0335901e567459a3ef1589896d810e99 65378 tabix_0.2.5-2_mipsel.deb
Checksums-Sha256:
- 5172771332558c050cea038548f434974b41ce9b6d4cc5c9723c633cbefd6dec 56558 tabix_0.2.5-1_mipsel.deb
+ e44c62ac4edd13391cb4553ba286657bb972fe940f3669111c73ff8d2ae04bc0 65378 tabix_0.2.5-2_mipsel.deb
Files:
- 43de2dd42946ae7944ac51bdcf90ea44 56558 science optional tabix_0.2.5-1_mipsel.deb
+ 3f8300c41bcf23824a870ec21b719b2a 65378 science optional tabix_0.2.5-2_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_mipsel.deb
+tabix_0.2.5-2_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 56558 bytes: control archive= 997 bytes.
- 786 bytes, 16 lines control
+ size 65378 bytes: control archive= 996 bytes.
+ 781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 176
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 162
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -953,26 +992,26 @@ tabix_0.2.5-1_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:18 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/bin/
--rwxr-xr-x root/root 25792 2011-05-10 11:18 ./usr/bin/bgzip
--rwxr-xr-x root/root 73376 2011-05-10 11:18 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-05-10 11:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-26 01:27 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/bin/
+-rwxr-xr-x root/root 81248 2012-04-26 01:27 ./usr/bin/tabix
+-rwxr-xr-x root/root 28540 2012-04-26 01:27 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2012-04-26 01:27 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -986,7 +1025,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-970195d3-7efe-46a8-830d-95b863b60c53/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-b6dc3c12-cc51-4c82-96d3-a7266257bcc8/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -994,19 +1033,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 1480
-Build-Time: 67
+Build-Space: 1604
+Build-Time: 74
Distribution: sid
-Install-Time: 55
-Job: tabix_0.2.5-1
+Install-Time: 85
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 200
-Source-Version: 0.2.5-1
-Space: 1480
+Package-Time: 334
+Source-Version: 0.2.5-2
+Space: 1604
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1118
-Build needed 00:03:20, 1480k disc space
-Signature with key '21BDEC11' requested:
+Finished at 20120426-0128
+Build needed 00:05:34, 1604k disc space
+Signature with key '7550FB2E' requested:
diff --git a/mipsel.log b/mipsel.log
index e4c3b40..817819d 100644
--- a/mipsel.log
+++ b/mipsel.log
@@ -1,67 +1,65 @@
-From buildd at rem.debian.org Tue May 10 11:18:52 2011
-Return-path: <buildd at rem.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at eysler.debian.org Thu Apr 26 01:28:13 2012
+Return-path: <buildd at eysler.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
- id 1QJkxo-0006cE-2H
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:52 +0000
-Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SNDVF-0008Tj-Bt
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:13 +0000
+Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
- id 1QJkxm-000785-QL
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:51 +0000
-Received: from buildd by rem.debian.org with local (Exim 4.72)
- (envelope-from <buildd at rem.debian.org>) id 1QJkxm-0008Qs-5X
- for logs at buildd.debian.org; Tue, 10 May 2011 11:18:50 +0000
-Date: Tue, 10 May 2011 11:18:50 +0000
-Message-Id: <E1QJkxm-0008Qs-5X at rem.debian.org>
-From: buildd on rem <buildd at rem.debian.org>
+ CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SNDVD-0002lS-S8
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:11 +0000
+Received: from buildd by eysler.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at eysler.debian.org>) id 1SNDVC-0008I0-Pz
+ for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:10 +0000
+Date: Thu, 26 Apr 2012 01:28:10 +0000
+Message-Id: <E1SNDVC-0008I0-Pz at eysler.debian.org>
+From: buildd on eysler <buildd at eysler.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on mipsel (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-2 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (mipsel) 10 May 2011 11:15 ║
+║ tabix 0.2.5-2 (mipsel) 26 Apr 2012 01:22 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: mipsel
-Get:1 http://mirror.ayous.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://mirror.ayous.org unstable/main Sources [5657 kB]
+Get:1 http://ftp.at.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.at.debian.org unstable/main Sources [6244 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:6 http://mirror.ayous.org unstable/contrib Sources [51.4 kB]
-Get:7 http://mirror.ayous.org unstable/non-free Sources [97.1 kB]
-Get:8 http://mirror.ayous.org unstable/main mipsel Packages [7094 kB]
-Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [54.8 kB]
-Ign http://mirror.ayous.org unstable/contrib TranslationIndex
-Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2264 B]
-Ign http://mirror.ayous.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main mipsel Packages [7094 kB]
-Get:14 http://incoming.debian.org unstable/contrib mipsel Packages [54.8 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:7 http://ftp.at.debian.org unstable/contrib Sources [53.9 kB]
+Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.9 kB]
+Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5816 kB]
+Get:10 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Get:11 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.at.debian.org unstable/main Translation-en [3943 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main mipsel Packages [5816 kB]
+Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:19 http://incoming.debian.org Sources [26.7 kB]
+Get:20 http://incoming.debian.org Packages [398 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 26.8 MB in 47s (560 kB/s)
+Fetched 33.3 MB in 2min 0s (276 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -82,11 +80,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (102 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (85.6 kB/s)
Download complete and in download only mode
Check arch
@@ -100,173 +98,172 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.2)
-e2fsprogs: already installed (1.41.12-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.11-3)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
-cdbs: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 17 not upgraded.
-Need to get 9167 kB of archives.
-After this operation, 29.7 MB of additional disk space will be used.
-Get:1 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 8.2.2 [207 kB]
-Get:2 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-5 [1154 kB]
-Get:3 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.0-1 [35.1 kB]
-Get:4 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.0.2-1 [1008 kB]
-Get:5 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.04-5+b1 [238 kB]
-Get:6 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.04-5+b1 [49.9 kB]
-Get:7 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-3 [152 kB]
-Get:8 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 8.12-3 [262 kB]
-Get:9 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-2+b1 [832 kB]
-Get:10 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:11 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.28.6-1 [1503 kB]
-Get:12 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.2-1 [110 kB]
-Get:13 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-4 [411 kB]
-Get:14 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-3 [2023 kB]
-Get:15 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://mirror.ayous.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://mirror.ayous.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.3.4.dfsg-3 [192 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 1 not upgraded.
+Need to get 9717 kB of archives.
+After this operation, 26.7 MB of additional disk space will be used.
+Get:1 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:2 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:3 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
+Get:4 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
+Get:5 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:6 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-4 [1959 kB]
+Get:7 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:8 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:9 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:10 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:11 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:12 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:13 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
+Get:14 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:15 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
+Get:16 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9167 kB in 1s (8368 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 11389 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_mipsel.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_mipsel.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_mipsel.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_mipsel.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_mipsel.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_mipsel.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_mipsel.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_mipsel.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_mipsel.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9717 kB in 3s (2640 kB/s)
+Selecting previously unselected package libpipeline1:mipsel.
+(Reading database ... 10748 files and directories currently installed.)
+Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
+Selecting previously unselected package libmagic1:mipsel.
+Unpacking libmagic1:mipsel (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3:mipsel.
+Unpacking libpcre3:mipsel (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
+Selecting previously unselected package libxml2:mipsel.
+Unpacking libxml2:mipsel (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
+Selecting previously unselected package libffi5:mipsel.
+Unpacking libffi5:mipsel (from .../libffi5_3.0.10-3_mipsel.deb) ...
+Selecting previously unselected package libglib2.0-0:mipsel.
+Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.32.0-4_mipsel.deb) ...
+Selecting previously unselected package libcroco3:mipsel.
+Unpacking libcroco3:mipsel (from .../libcroco3_0.6.5-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0:mipsel.
+Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_mipsel.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1_mipsel.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_mipsel.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_mipsel.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_mipsel.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_mipsel.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_mipsel.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_mipsel.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:mipsel.
+Unpacking zlib1g-dev:mipsel (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
+Setting up libpipeline1:mipsel (1.2.1-1) ...
+Setting up libmagic1:mipsel (5.11-1) ...
+Setting up libpcre3:mipsel (1:8.30-4) ...
+Setting up libxml2:mipsel (2.7.8.dfsg-9) ...
+Setting up libffi5:mipsel (3.0.10-3) ...
+Setting up libglib2.0-0:mipsel (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:mipsel (0.6.5-1) ...
+Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:mipsel (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 17 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
-Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc-4.4_4.4.6-2 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.4_4.4.6-2 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.4_4.4.6-2 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4_4.4.6-2 gcc-4.4-base_4.4.6-2 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb4.7_4.7.25-18 libdb4.8_4.8.30-7 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmp3c2_2:4.3.2+dfsg-2 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-2 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -277,12 +274,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -291,144 +290,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-1_mipsel.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../tabix_0.2.5-2_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1118
+Build finished at 20120426-0128
-tabix_0.2.5-1_mipsel.changes:
+tabix_0.2.5-2_mipsel.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- cb9248273b05e891d21ccddb8437d851eea2b26f 56558 tabix_0.2.5-1_mipsel.deb
+ ba1e99cd0335901e567459a3ef1589896d810e99 65378 tabix_0.2.5-2_mipsel.deb
Checksums-Sha256:
- 5172771332558c050cea038548f434974b41ce9b6d4cc5c9723c633cbefd6dec 56558 tabix_0.2.5-1_mipsel.deb
+ e44c62ac4edd13391cb4553ba286657bb972fe940f3669111c73ff8d2ae04bc0 65378 tabix_0.2.5-2_mipsel.deb
Files:
- 43de2dd42946ae7944ac51bdcf90ea44 56558 science optional tabix_0.2.5-1_mipsel.deb
+ 3f8300c41bcf23824a870ec21b719b2a 65378 science optional tabix_0.2.5-2_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_mipsel.deb
+tabix_0.2.5-2_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 56558 bytes: control archive= 997 bytes.
- 786 bytes, 16 lines control
+ size 65378 bytes: control archive= 996 bytes.
+ 781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 176
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 162
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -440,26 +461,26 @@ tabix_0.2.5-1_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:18 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
-drwxr-xr-x root/root 0 2011-05-10 11:18 ./usr/bin/
--rwxr-xr-x root/root 25792 2011-05-10 11:18 ./usr/bin/bgzip
--rwxr-xr-x root/root 73376 2011-05-10 11:18 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-05-10 11:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-26 01:27 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/bin/
+-rwxr-xr-x root/root 81248 2012-04-26 01:27 ./usr/bin/tabix
+-rwxr-xr-x root/root 28540 2012-04-26 01:27 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2012-04-26 01:27 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -473,7 +494,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-970195d3-7efe-46a8-830d-95b863b60c53/build/buildd-tabix_0.2.5-1-mipsel-HIrDp1
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-b6dc3c12-cc51-4c82-96d3-a7266257bcc8/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -481,19 +502,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 1480
-Build-Time: 67
+Build-Space: 1604
+Build-Time: 74
Distribution: sid
-Install-Time: 55
-Job: tabix_0.2.5-1
+Install-Time: 85
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 200
-Source-Version: 0.2.5-1
-Space: 1480
+Package-Time: 334
+Source-Version: 0.2.5-2
+Space: 1604
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1118
-Build needed 00:03:20, 1480k disc space
-Signature with key '21BDEC11' requested:
+Finished at 20120426-0128
+Build needed 00:05:34, 1604k disc space
+Signature with key '7550FB2E' requested:
diff --git a/powerpc.log b/powerpc.log
index cb1ef8f..0e6ff6f 100644
--- a/powerpc.log
+++ b/powerpc.log
@@ -1,69 +1,71 @@
-From buildd at poulenc.debian.org Tue May 10 11:15:30 2011
+From buildd at poulenc.debian.org Wed Apr 25 21:17:57 2012
Return-path: <buildd at poulenc.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
- id 1QJkuY-00064h-1j
- for logs at buildd.debian.org; Tue, 10 May 2011 11:15:30 +0000
+ id 1SN9b3-0003jw-0Y
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:17:57 +0000
Received: from poulenc.ynic.york.ac.uk ([144.32.168.77]
helo=poulenc.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=poulenc.debian.org, EMAIL=hostmaster at poulenc.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at poulenc.debian.org>)
- id 1QJkua-0003Zb-2a; Tue, 10 May 2011 11:15:32 +0000
-Received: from buildd by poulenc.debian.org with local (Exim 4.69)
+ (Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
+ id 1SN9b1-0006Pv-Vg; Wed, 25 Apr 2012 21:17:56 +0000
+Received: from buildd by poulenc.debian.org with local (Exim 4.72)
(envelope-from <buildd at poulenc.debian.org>)
- id 1QJkuV-0005Dw-FM; Tue, 10 May 2011 11:15:27 +0000
+ id 1SN9b1-0002tR-C2; Wed, 25 Apr 2012 21:17:55 +0000
+Message-Id: <E1SN9b1-0002tR-C2 at poulenc.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 10 May 2011 11:15:27 +0000
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Wed, 25 Apr 2012 21:17:55 +0000
From: buildd on poulenc <buildd at poulenc.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on powerpc (dist=sid)
-Key-Id: 205E9E83
-Message-Id: <E1QJkuV-0005Dw-FM at poulenc.debian.org>
+Subject: Log for successful build of tabix_0.2.5-2 on powerpc (dist=sid)
+Key-Id: 050CE77C
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on poulenc.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (powerpc) 10 May 2011 11:13 ║
+║ tabix 0.2.5-2 (powerpc) 25 Apr 2012 21:14 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: powerpc
-Get:1 http://ftp.uk.debian.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://ftp.uk.debian.org unstable/main Sources [5657 kB]
+Get:1 http://ftp.uk.debian.org unstable InRelease [210 kB]
+Get:2 http://ftp.uk.debian.org unstable/main Sources [6244 kB]
+Get:3 http://incoming.debian.org unstable InRelease [210 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:6 http://ftp.uk.debian.org unstable/contrib Sources [51.4 kB]
-Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.1 kB]
-Get:8 http://ftp.uk.debian.org unstable/main powerpc Packages [7185 kB]
-Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [54.4 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [53.9 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
+Get:8 http://ftp.uk.debian.org unstable/main powerpc Packages [5888 kB]
+Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [36.9 kB]
Ign http://ftp.uk.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.uk.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://ftp.uk.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main powerpc Packages [7185 kB]
-Get:14 http://incoming.debian.org unstable/contrib powerpc Packages [54.4 kB]
+Get:10 http://ftp.uk.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.uk.debian.org unstable/main Translation-en [3943 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main powerpc Packages [5888 kB]
+Get:16 http://incoming.debian.org unstable/contrib powerpc Packages [36.9 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:21 http://incoming.debian.org Sources [33.5 kB]
+Get:22 http://incoming.debian.org Packages [517 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 27.0 MB in 26s (1016 kB/s)
+Fetched 33.6 MB in 2min 4s (270 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +86,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (86.4 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (60.6 kB/s)
Download complete and in download only mode
Check arch
@@ -102,173 +104,172 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-5)
+ncurses-bin: already installed (5.9-5)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
-Need to get 9385 kB of archives.
-After this operation, 28.8 MB of additional disk space will be used.
-Get:1 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils powerpc 8.2.2 [209 kB]
-Get:2 http://ftp.uk.debian.org/debian/ unstable/main groff-base powerpc 1.21-5 [1189 kB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.0-1 [37.2 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.0.2-1 [1020 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 5.04-5+b1 [240 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 5.04-5+b1 [49.9 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-3 [141 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 powerpc 8.12-3 [258 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-2+b1 [853 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.28.6-1 [1611 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.2-1 [128 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-4 [422 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-3 [2046 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.3.4.dfsg-3 [190 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 37 not upgraded.
+Need to get 9913 kB of archives.
+After this operation, 26.3 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.1-1 [38.5 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 5.11-1 [257 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 powerpc 1:8.30-4 [241 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-9 [843 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libffi5 powerpc 3.0.10-3 [25.5 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.32.0-4 [2019 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.5-1 [143 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils powerpc 9.0.1 [208 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main groff-base powerpc 1.21-7 [1179 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.1-2 [1054 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 5.11-1 [53.1 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-5 [132 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-5 [2036 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.6.dfsg-2 [209 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9385 kB in 4s (2112 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 10573 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_powerpc.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_powerpc.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_powerpc.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_powerpc.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_powerpc.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_powerpc.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_powerpc.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_powerpc.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_powerpc.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9913 kB in 4s (2202 kB/s)
+Selecting previously unselected package libpipeline1:powerpc.
+(Reading database ... 10787 files and directories currently installed.)
+Unpacking libpipeline1:powerpc (from .../libpipeline1_1.2.1-1_powerpc.deb) ...
+Selecting previously unselected package libmagic1:powerpc.
+Unpacking libmagic1:powerpc (from .../libmagic1_5.11-1_powerpc.deb) ...
+Selecting previously unselected package libpcre3:powerpc.
+Unpacking libpcre3:powerpc (from .../libpcre3_1%3a8.30-4_powerpc.deb) ...
+Selecting previously unselected package libxml2:powerpc.
+Unpacking libxml2:powerpc (from .../libxml2_2.7.8.dfsg-9_powerpc.deb) ...
+Selecting previously unselected package libffi5:powerpc.
+Unpacking libffi5:powerpc (from .../libffi5_3.0.10-3_powerpc.deb) ...
+Selecting previously unselected package libglib2.0-0:powerpc.
+Unpacking libglib2.0-0:powerpc (from .../libglib2.0-0_2.32.0-4_powerpc.deb) ...
+Selecting previously unselected package libcroco3:powerpc.
+Unpacking libcroco3:powerpc (from .../libcroco3_0.6.5-1_powerpc.deb) ...
+Selecting previously unselected package libunistring0:powerpc.
+Unpacking libunistring0:powerpc (from .../libunistring0_0.9.3-5_powerpc.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_powerpc.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_powerpc.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_powerpc.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1_powerpc.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_powerpc.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_powerpc.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_powerpc.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_powerpc.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_powerpc.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_powerpc.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_powerpc.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_powerpc.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:powerpc.
+Unpacking zlib1g-dev:powerpc (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_powerpc.deb) ...
+Setting up libpipeline1:powerpc (1.2.1-1) ...
+Setting up libmagic1:powerpc (5.11-1) ...
+Setting up libpcre3:powerpc (1:8.30-4) ...
+Setting up libxml2:powerpc (2.7.8.dfsg-9) ...
+Setting up libffi5:powerpc (3.0.10-3) ...
+Setting up libglib2.0-0:powerpc (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:powerpc (0.6.5-1) ...
+Setting up libunistring0:powerpc (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:powerpc (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.26-2-powerpc64 powerpc (ppc64)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.6_4.6.0-7 gcc-4.6_4.6.0-7 libc6-dev_2.13-2 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 linux-libc-dev_2.6.38-5
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-7 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-7 gcc_4:4.6.0-5 gcc-4.6_4.6.0-7 gcc-4.6-base_4.6.0-7 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-7 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-7 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.1-3 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-4 libstdc++6_4.6.0-7 libstdc++6-4.6-dev_4.6.0-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-5 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.1-3 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32-5-powerpc64 powerpc (ppc64)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -278,14 +279,15 @@ Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -294,157 +296,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture powerpc
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-dh_clean
- debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_powerpc.deb'.
- dpkg-genchanges -B -mpowerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org> >../tabix_0.2.5-1_powerpc.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_powerpc.deb'.
+ dpkg-genchanges -B -mpowerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org> >../tabix_0.2.5-2_powerpc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1115
+Build finished at 20120425-2117
-tabix_0.2.5-1_powerpc.changes:
+tabix_0.2.5-2_powerpc.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: powerpc
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: powerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 2de9c94fc6184a0b74adb013d03dc9fd058c7855 60112 tabix_0.2.5-1_powerpc.deb
+ 33dfd09133acf9bb5fa0433d5789c328dad23cbf 62134 tabix_0.2.5-2_powerpc.deb
Checksums-Sha256:
- ab56d07c65af628c81564b0cfe6b894a6294dc01f170521c429617907e87ecd2 60112 tabix_0.2.5-1_powerpc.deb
+ 375c4eadc3d8bb271e2ea86f379f1f5de3621eee783cce55a98c7433c6e331f3 62134 tabix_0.2.5-2_powerpc.deb
Files:
- dd476f3bfa58f6075c3dc84dbfdc5fa9 60112 science optional tabix_0.2.5-1_powerpc.deb
+ 9ce90843376bde0b9fb27c02fb5b206d 62134 science optional tabix_0.2.5-2_powerpc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_powerpc.deb
+tabix_0.2.5-2_powerpc.deb
─────────────────────────
new debian package, version 2.0.
- size 60112 bytes: control archive= 998 bytes.
- 787 bytes, 16 lines control
+ size 62134 bytes: control archive= 997 bytes.
+ 782 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: powerpc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 168
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 148
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -456,26 +467,26 @@ tabix_0.2.5-1_powerpc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:15 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:17 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-drwxr-xr-x root/root 0 2011-05-10 11:15 ./usr/bin/
--rwxr-xr-x root/root 67656 2011-05-10 11:15 ./usr/bin/tabix
--rwxr-xr-x root/root 24052 2011-05-10 11:15 ./usr/bin/bgzip
-lrwxrwxrwx root/root 0 2011-05-10 11:15 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/bin/
+-rwxr-xr-x root/root 69688 2012-04-25 21:17 ./usr/bin/tabix
+-rwxr-xr-x root/root 25408 2012-04-25 21:17 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2012-04-25 21:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -489,7 +500,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-powerpc-sbuild-a2291399-426c-4753-95b1-690e0b51d587/build/buildd-tabix_0.2.5-1-powerpc-yTsWFl
+Purging /var/lib/schroot/mount/sid-powerpc-sbuild-bb24d36f-8b2e-4c06-acd1-ad358f427e9e/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -497,18 +508,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: powerpc
-Build-Space: 1452
-Build-Time: 20
+Build-Space: 1568
+Build-Time: 19
Distribution: sid
-Install-Time: 62
-Job: tabix_0.2.5-1
+Install-Time: 43
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 124
-Source-Version: 0.2.5-1
-Space: 1452
+Package-Time: 202
+Source-Version: 0.2.5-2
+Space: 1568
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1115
-Build needed 00:02:04, 1452k disc space
-Signature with key '205E9E83' requested:
+Finished at 20120425-2117
+Build needed 00:03:22, 1568k disc space
+Signature with key '050CE77C' requested:
diff --git a/s390.log b/s390.log
index fe6b593..9112bbf 100644
--- a/s390.log
+++ b/s390.log
@@ -1,69 +1,71 @@
-From buildd at zandonai.debian.org Tue May 10 11:17:11 2011
+From buildd at zandonai.debian.org Wed Apr 25 21:26:54 2012
Return-path: <buildd at zandonai.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1QJkwA-0006LG-Us
- for logs at buildd.debian.org; Tue, 10 May 2011 11:17:11 +0000
+ id 1SN9jh-0004yJ-Sk
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:26:54 +0000
Received: from zandonai.debian.org ([80.245.147.46])
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CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at zandonai.debian.org>)
- id 1QJkwD-0003cm-2e; Tue, 10 May 2011 11:17:13 +0000
-Received: from buildd by zandonai.debian.org with local (Exim 4.69)
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
+ id 1SN9jg-0006wO-Tg; Wed, 25 Apr 2012 21:26:53 +0000
+Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1QJkw9-0006dY-RF; Tue, 10 May 2011 11:17:09 +0000
+ id 1SN9jg-0007qM-HA; Wed, 25 Apr 2012 21:26:52 +0000
+Message-Id: <E1SN9jg-0007qM-HA at zandonai.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.021 (F2.76; B3.07_01; Q3.07)
-Date: Tue, 10 May 2011 11:17:09 +0000
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Wed, 25 Apr 2012 21:26:52 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on s390 (dist=sid)
-Key-Id: 9BD94C88
-Message-Id: <E1QJkw9-0006dY-RF at zandonai.debian.org>
+Subject: Log for successful build of tabix_0.2.5-2 on s390 (dist=sid)
+Key-Id: E7C67939
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (s390) 10 May 2011 11:15 ║
+║ tabix 0.2.5-2 (s390) 25 Apr 2012 21:26 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: s390
-Get:1 http://ftp.de.debian.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [5657 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
+Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
+Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
+Get:6 http://ftp.de.debian.org unstable/main s390 Packages [5801 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [51.4 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.1 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390 Packages [7093 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [53.4 kB]
+Get:7 http://incoming.debian.org Release.gpg [836 B]
+Get:8 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [36.7 kB]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://ftp.de.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:13 http://incoming.debian.org unstable/main s390 Packages [7093 kB]
-Get:14 http://incoming.debian.org unstable/contrib s390 Packages [53.4 kB]
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main s390 Packages [5802 kB]
+Get:16 http://incoming.debian.org unstable/contrib s390 Packages [36.7 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:16 http://incoming.debian.org Release [1604 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:21 http://incoming.debian.org Sources [31.9 kB]
+Get:22 http://incoming.debian.org Packages [519 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 26.8 MB in 25s (1034 kB/s)
+Fetched 33.4 MB in 11s (2839 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +86,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (89.5 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (93.7 kB/s)
Download complete and in download only mode
Check arch
@@ -102,173 +104,172 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.2)
-e2fsprogs: already installed (1.41.12-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-5)
+ncurses-bin: already installed (5.9-5)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-gcc: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.0-5 >= 4:4.4.3 is satisfied)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.2 >= 1.13.5 is satisfied)
-cdbs: missing
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 20 not upgraded.
-Need to get 9439 kB of archives.
-After this operation, 28.4 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 8.2.2 [208 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-5 [1158 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.0-1 [38.7 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.0.2-1 [1017 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.04-5+b1 [243 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main file s390 5.04-5+b1 [50.1 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-3 [142 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 8.12-3 [262 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-2+b1 [873 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.28.6-1 [1639 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.2-1 [128 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-4 [431 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-3 [2068 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.3.4.dfsg-3 [193 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
+Need to get 10.1 MB of archives.
+After this operation, 26.5 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.1-1 [40.0 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.11-1 [260 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 1:8.30-4 [247 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-9 [882 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390 3.0.10-3 [25.3 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.32.0-4 [2099 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.5-1 [150 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 9.0.1 [213 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-7 [1145 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.1-2 [1068 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390 5.11-1 [53.7 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-5 [143 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-5 [2073 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.6.dfsg-2 [213 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9439 kB in 2s (3212 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 10521 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_s390.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_s390.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_s390.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_s390.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_s390.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_s390.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_s390.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_s390.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_s390.deb) ...
-Selecting previously deselected package html2text.
+Fetched 10.1 MB in 0s (13.8 MB/s)
+Selecting previously unselected package libpipeline1:s390.
+(Reading database ... 10731 files and directories currently installed.)
+Unpacking libpipeline1:s390 (from .../libpipeline1_1.2.1-1_s390.deb) ...
+Selecting previously unselected package libmagic1:s390.
+Unpacking libmagic1:s390 (from .../libmagic1_5.11-1_s390.deb) ...
+Selecting previously unselected package libpcre3:s390.
+Unpacking libpcre3:s390 (from .../libpcre3_1%3a8.30-4_s390.deb) ...
+Selecting previously unselected package libxml2:s390.
+Unpacking libxml2:s390 (from .../libxml2_2.7.8.dfsg-9_s390.deb) ...
+Selecting previously unselected package libffi5:s390.
+Unpacking libffi5:s390 (from .../libffi5_3.0.10-3_s390.deb) ...
+Selecting previously unselected package libglib2.0-0:s390.
+Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.32.0-4_s390.deb) ...
+Selecting previously unselected package libcroco3:s390.
+Unpacking libcroco3:s390 (from .../libcroco3_0.6.5-1_s390.deb) ...
+Selecting previously unselected package libunistring0:s390.
+Unpacking libunistring0:s390 (from .../libunistring0_0.9.3-5_s390.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_s390.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_s390.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_s390.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_s390.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_s390.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_s390.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_s390.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_s390.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_s390.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_s390.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_s390.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:s390.
+Unpacking zlib1g-dev:s390 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390.deb) ...
+Setting up libpipeline1:s390 (1.2.1-1) ...
+Setting up libmagic1:s390 (5.11-1) ...
+Setting up libpcre3:s390 (1:8.30-4) ...
+Setting up libxml2:s390 (2.7.8.dfsg-9) ...
+Setting up libffi5:s390 (3.0.10-3) ...
+Setting up libglib2.0-0:s390 (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:s390 (0.6.5-1) ...
+Setting up libunistring0:s390 (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:s390 (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-bpo.5-s390x s390 (s390x)
-Toolchain package versions: binutils_2.21.51.20110421-3 dpkg-dev_1.16.0.2 g++-4.6_4.6.0-6 gcc-4.6_4.6.0-6 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.51.20110421-3 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.6.0-5 cpp-4.6_4.6.0-6 dash_0.5.5.1-7.4 debconf_1.5.39 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.2 dpkg-dev_1.16.0.2 e2fslibs_1.41.12-2 e2fsprogs_1.41.12-2 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b1 g++_4:4.6.0-5 g++-4.6_4.6.0-6 gcc_4:4.6.0-5 gcc-4.4-base_4.4.6-2 gcc-4.5-base_4.5.3-1 gcc-4.6_4.6.0-6 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libcloog-ppl0_0.15.9-3 libcomerr2_1.41.12-2 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.2 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpc2_0.9-3 libmpfr4_3.0.1-1 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libppl-c4_0.11.2-3 libppl9_0.11.2-3 libpwl5_0.11.2-3 libreadline6_6.2-1 libselinux1_2.0.98-1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.41.12-2 libstdc++6_4.6.0-6 libstdc++6-4.6-dev_4.6.0-6 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.32-5-s390x s390 (s390x)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -278,14 +279,15 @@ Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/Source/Package.pm line 258.
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -294,157 +296,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390
fakeroot debian/rules clean
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-dh_clean
- debian/rules build
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390-Vl3vf0/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-Use of uninitialized value $ENV{"HOME"} in concatenation (.) or string at /usr/share/perl5/Dpkg/BuildFlags.pm line 109.
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_s390.deb'.
- dpkg-genchanges -B -ms390 Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-1_s390.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1117
+Build finished at 20120425-2126
-tabix_0.2.5-1_s390.changes:
+tabix_0.2.5-2_s390.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: s390
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: s390 Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 361ad6d3bd39c79a07609263a0318ec84c71a2aa 58552 tabix_0.2.5-1_s390.deb
+ ba8aea97668c6ea38112f5048047ff02ce1cf461 60860 tabix_0.2.5-2_s390.deb
Checksums-Sha256:
- 83a29474b0865ae85bc6aa9a473a319808651a951035ffc6288fc09966894bd9 58552 tabix_0.2.5-1_s390.deb
+ 0dd175829f5825c359c529c7a0529ae5d3f9ac7240b7c4a6486c23c608dd435a 60860 tabix_0.2.5-2_s390.deb
Files:
- 6038141cc5c35caf1ff72ef711085929 58552 science optional tabix_0.2.5-1_s390.deb
+ 9922425058a03f22cead7f27d2b9054b 60860 science optional tabix_0.2.5-2_s390.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_s390.deb
+tabix_0.2.5-2_s390.deb
──────────────────────
new debian package, version 2.0.
- size 58552 bytes: control archive= 994 bytes.
- 784 bytes, 16 lines control
+ size 60860 bytes: control archive= 992 bytes.
+ 779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: s390
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 180
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 159
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -456,26 +467,26 @@ tabix_0.2.5-1_s390.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/bin/
--rwxr-xr-x root/root 26612 2011-05-10 11:17 ./usr/bin/bgzip
--rwxr-xr-x root/root 73908 2011-05-10 11:17 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/bin/
+-rwxr-xr-x root/root 28512 2012-04-25 21:26 ./usr/bin/bgzip
+-rwxr-xr-x root/root 78404 2012-04-25 21:26 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:26 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-05-10 11:17 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2011-05-10 11:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+lrwxrwxrwx root/root 0 2012-04-25 21:26 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -489,7 +500,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390-sbuild-1d027449-01d5-4a5e-ac51-5e45cc1afa82/build/buildd-tabix_0.2.5-1-s390-Vl3vf0
+Purging /var/lib/schroot/mount/sid-s390-sbuild-ded84564-6b94-4973-9305-78289452d843/build/buildd-tabix_0.2.5-2-s390-wDimVL
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -497,22 +508,22 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390
-Build-Space: 1588
-Build-Time: 12
+Build-Space: 1696
+Build-Time: 9
Distribution: sid
-Install-Time: 21
-Job: tabix_0.2.5-1
+Install-Time: 7
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 70
-Source-Version: 0.2.5-1
-Space: 1588
+Package-Time: 40
+Source-Version: 0.2.5-2
+Space: 1696
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1117
-Build needed 00:01:10, 1588k disc space
-Signature with key '9BD94C88' requested:
-From buildd at zandonai.debian.org Sun Nov 27 01:21:51 2011
+Finished at 20120425-2126
+Build needed 00:00:40, 1696k disc space
+Signature with key 'E7C67939' requested:
+From buildd at zandonai.debian.org Wed Apr 25 21:49:51 2012
Return-path: <buildd at zandonai.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -520,64 +531,66 @@ Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1RUTRH-0007fw-NG
- for logs at buildd.debian.org; Sun, 27 Nov 2011 01:21:51 +0000
+ id 1SNA5v-0008Pp-Ir
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:49:51 +0000
Received: from zandonai.debian.org ([80.245.147.46])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1RUTRH-0008LD-28; Sun, 27 Nov 2011 01:21:51 +0000
+ id 1SNA5u-00086r-HC; Wed, 25 Apr 2012 21:49:50 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1RUTRG-0005NP-JZ; Sun, 27 Nov 2011 01:21:50 +0000
-Message-Id: <E1RUTRG-0005NP-JZ at zandonai.debian.org>
+ id 1SNA5u-0001qu-3D; Wed, 25 Apr 2012 21:49:50 +0000
+Message-Id: <E1SNA5u-0001qu-3D at zandonai.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Sun, 27 Nov 2011 01:21:50 +0000
+Date: Wed, 25 Apr 2012 21:49:50 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on s390x (dist=sid)
-Key-Id: 96C8554F
+Subject: Log for successful build of tabix_0.2.5-2 on s390x (dist=sid)
+Key-Id: BE1C5586
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (s390x) 27 Nov 2011 01:21 ║
+║ tabix 0.2.5-2 (s390x) 25 Apr 2012 21:49 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable InRelease [181 kB]
-Get:2 http://ftp.de.debian.org unstable/main Sources [5921 kB]
-Get:3 http://incoming.debian.org unstable InRelease [181 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
+Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
+Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
+Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5700 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [5921 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [56.5 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [103 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390x Packages [3917 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390x Packages [33.4 kB]
+Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2045 B]
-Ign http://ftp.de.debian.org unstable/contrib Translation-en
-Get:11 http://incoming.debian.org unstable/contrib Sources [56.5 kB]
-Get:12 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:13 http://incoming.debian.org unstable/main s390x Packages [3917 kB]
-Get:14 http://incoming.debian.org unstable/contrib s390x Packages [33.4 kB]
+Get:8 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:9 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:10 http://incoming.debian.org Release.gpg [836 B]
+Get:11 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
+Get:12 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main s390x Packages [5701 kB]
+Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:15 http://incoming.debian.org unstable/main TranslationIndex [2045 B]
-Get:16 http://incoming.debian.org Release [1616 B]
-Get:17 http://incoming.debian.org Sources [29.8 kB]
-Get:18 http://incoming.debian.org Packages [1002 kB]
-Ign http://incoming.debian.org unstable/contrib Translation-en
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:21 http://incoming.debian.org Sources [31.5 kB]
+Get:22 http://incoming.debian.org Packages [498 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 21.5 MB in 18s (1149 kB/s)
+Fetched 33.2 MB in 11s (2986 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -598,11 +611,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (321 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (80.7 kB/s)
Download complete and in download only mode
Check arch
@@ -615,38 +628,37 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-build-essential: already installed (11.5)
-fakeroot: already installed (1.18.1-1)
+build-essential: already installed (11.5+b1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-libc6-dev: already installed (2.13-21)
-gcc: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
-cdbs: missing
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1+b1)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.9.11
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
@@ -655,114 +667,110 @@ The following extra packages will be installed:
libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 20 newly installed, 0 to remove and 1 not upgraded.
-Need to get 9843 kB of archives.
-After this operation, 28.2 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.0-5 [39.4 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 8.12-4 [234 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3 [26.1 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.30.2-4 [1866 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-5 [890 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.2-2 [123 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5 [438 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 8.2.3 [213 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-6 [1181 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.0.2-3 [1021 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.09-2 [253 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.09-2 [52.7 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5 [155 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.99 [77.1 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15 [111 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5 [2157 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main debhelper all 8.9.11 [552 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.3.4.dfsg-3 [199 kB]
+0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
+Need to get 10.3 MB of archives.
+After this operation, 27.7 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9843 kB in 2s (3390 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10717 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-5_s390x.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_s390x.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_s390x.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-4_s390x.deb) ...
-Selecting previously unselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5_s390x.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-2_s390x.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_s390x.deb) ...
+Fetched 10.3 MB in 0s (11.6 MB/s)
+Selecting previously unselected package libpipeline1:s390x.
+(Reading database ... 10853 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libmagic1:s390x.
+Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
+Selecting previously unselected package libpcre3:s390x.
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libxml2:s390x.
+Unpacking libxml2:s390x (from .../libxml2_2.7.8.dfsg-9_s390x.deb) ...
+Selecting previously unselected package libffi5:s390x.
+Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
+Selecting previously unselected package libglib2.0-0:s390x.
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
+Selecting previously unselected package libcroco3:s390x.
+Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_s390x.deb) ...
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_s390x.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_s390x.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-3_s390x.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.09-2_s390x.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.09-2_s390x.deb) ...
+Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_s390x.deb) ...
-Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.99_all.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_s390x.deb) ...
+Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_s390x.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-5+b1_s390x.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.9.11_all.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_s390x.deb) ...
-Setting up libpipeline1 (1.2.0-5) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-4) ...
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:s390x.
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libmagic1:s390x (5.11-1) ...
+Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libxml2:s390x (2.7.8.dfsg-9) ...
+Setting up libffi5:s390x (3.0.10-3+b1) ...
+Setting up libglib2.0-0:s390x (2.32.0-4) ...
No schema files found: doing nothing.
-Setting up libxml2 (2.7.8.dfsg-5) ...
-Setting up libcroco3 (0.6.2-2) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up bsdmainutils (8.2.3) ...
+Setting up libcroco3:s390x (0.6.5-1) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.0.2-3) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.09-2) ...
-Setting up file (5.09-2) ...
-Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.99) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up html2text (1.3.2a-15+b1) ...
+Setting up gettext (0.18.1.1-5+b1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.9.11) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-1 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-5 gcc-4.6_4.6.2-5 libc6-dev_2.13-21 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 linux-libc-dev_3.1.1-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.22-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.99 coreutils_8.13-3 cpp_4:4.6.1-3 cpp-4.6_4.6.2-5 dash_0.5.7-2 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1 debhelper_8.9.11 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.2 e2fslibs_1.42~WIP-2011-11-20-1 e2fsprogs_1.42~WIP-2011-11-20-1 fakeroot_1.18.1-1 file_5.09-2 findutils_4.4.2-1 g++_4:4.6.1-3 g++-4.6_4.6.2-5 gcc_4:4.6.1-3 gcc-4.6_4.6.2-5 gcc-4.6-base_4.6.2-5 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-2 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-4 libattr1_1:2.4.46-3 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-21 libc-dev-bin_2.13-21 libc6_2.13-21 libc6-dev_2.13-21 libclass-isa-perl_0.36-3 libcomerr2_1.42~WIP-2011-11-20-1 libcroco3_0.6.2-2 libdb5.1_5.1.25-11 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-5 libgdbm3_1.8.3-10 libglib2.0-0_2.30.2-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-5 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.09-2 libmount1_2.19.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_8.12-4 libpipeline1_1.2.0-5 libreadline6_6.2-8 libselinux1_2.1.0-4 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libss2_1.42~WIP-2011-11-20-1 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4.1 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libxml2_2.7.8.dfsg-5 linux-libc-dev_3.1.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-3 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-5 perl-base_5.14.2-5 perl-modules_5.14.2-5 po-debconf_1.0.16+nmu1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-2 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-3 tzdata_2011n-1 util-linux_2.19.1-5 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -773,12 +781,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -788,138 +798,165 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-bgzf.c: In function 'bgzf_close':
-bgzf.c:630:8: warning: variable 'count' set but not used [-Wunused-but-set-variable]
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-s390x-s9TZP5/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_installgsettings -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-1_s390x.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20111127-0121
+Build finished at 20120425-2149
-tabix_0.2.5-1_s390x.changes:
+tabix_0.2.5-2_s390x.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: s390x
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 43b5cbe29f879328523e0f0d37d8e751d090e8f2 61704 tabix_0.2.5-1_s390x.deb
+ 430c0c56548851c47209307ffbfe786453fba96d 63986 tabix_0.2.5-2_s390x.deb
Checksums-Sha256:
- 815e4d001e0ba24b6fb40ba986274a86e8e5827f6603bcb8f11d0930de382cc7 61704 tabix_0.2.5-1_s390x.deb
+ c5749f750f15ed2b0fb4bc7fa100be78c510816f6f72a1280118a70bdbed2b73 63986 tabix_0.2.5-2_s390x.deb
Files:
- 29af47ff096c864ddef090aa8bce088c 61704 science optional tabix_0.2.5-1_s390x.deb
+ 202e6360a875ee25d9b2dc24ccdde142 63986 science optional tabix_0.2.5-2_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_s390x.deb
+tabix_0.2.5-2_s390x.deb
───────────────────────
new debian package, version 2.0.
- size 61704 bytes: control archive= 996 bytes.
- 786 bytes, 16 lines control
+ size 63986 bytes: control archive= 992 bytes.
+ 781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 160
- Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 164
+ Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -931,26 +968,26 @@ tabix_0.2.5-1_s390x.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/bin/
--rwxr-xr-x root/root 29672 2011-11-27 01:21 ./usr/bin/bgzip
--rwxr-xr-x root/root 77808 2011-11-27 01:21 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-11-27 01:21 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/bin/
+-rwxr-xr-x root/root 30480 2012-04-25 21:49 ./usr/bin/bgzip
+-rwxr-xr-x root/root 81072 2012-04-25 21:49 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:49 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2011-11-27 01:21 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2011-11-27 01:21 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+lrwxrwxrwx root/root 0 2012-04-25 21:49 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -964,7 +1001,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-adf9aa1a-cb87-414e-91c3-963ed97e3330/sid-s390x-sbuild/build/buildd-tabix_0.2.5-1-s390x-s9TZP5
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-1026279f-80f1-4430-bcdb-6f43f7566348/sid-s390x-sbuild/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -972,18 +1009,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390x
-Build-Space: 1880
-Build-Time: 10
+Build-Space: 1996
+Build-Time: 9
Distribution: sid
-Install-Time: 8
-Job: tabix_0.2.5-1
+Install-Time: 7
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 46
-Source-Version: 0.2.5-1
-Space: 1880
+Package-Time: 42
+Source-Version: 0.2.5-2
+Space: 1996
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20111127-0121
-Build needed 00:00:46, 1880k disc space
-Signature with key '96C8554F' requested:
+Finished at 20120425-2149
+Build needed 00:00:42, 1996k disc space
+Signature with key 'BE1C5586' requested:
diff --git a/s390x.log b/s390x.log
new file mode 100644
index 0000000..91f90b8
--- /dev/null
+++ b/s390x.log
@@ -0,0 +1,501 @@
+From buildd at zandonai.debian.org Wed Apr 25 21:49:51 2012
+Return-path: <buildd at zandonai.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
+ id 1SNA5v-0008Pp-Ir
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:49:51 +0000
+Received: from zandonai.debian.org ([80.245.147.46])
+ from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
+ CN=zandonai.debian.org,
+ EMAIL=hostmaster at zandonai.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
+ id 1SNA5u-00086r-HC; Wed, 25 Apr 2012 21:49:50 +0000
+Received: from buildd by zandonai.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at zandonai.debian.org>)
+ id 1SNA5u-0001qu-3D; Wed, 25 Apr 2012 21:49:50 +0000
+Message-Id: <E1SNA5u-0001qu-3D at zandonai.debian.org>
+MIME-Version: 1.0
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
+Date: Wed, 25 Apr 2012 21:49:50 +0000
+From: buildd on zandonai <buildd at zandonai.debian.org>
+To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-2 on s390x (dist=sid)
+Key-Id: BE1C5586
+Delivered-To: logs at buildd.debian.org
+
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+
+╔══════════════════════════════════════════════════════════════════════════════╗
+║ tabix 0.2.5-2 (s390x) 25 Apr 2012 21:49 ║
+╚══════════════════════════════════════════════════════════════════════════════╝
+
+Package: tabix
+Version: 0.2.5-2
+Source Version: 0.2.5-2
+Architecture: s390x
+Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
+Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
+Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
+Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5700 kB]
+Ign http://incoming.debian.org InRelease
+Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:8 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:9 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:10 http://incoming.debian.org Release.gpg [836 B]
+Get:11 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
+Get:12 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:15 http://incoming.debian.org unstable/main s390x Packages [5701 kB]
+Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:21 http://incoming.debian.org Sources [31.5 kB]
+Get:22 http://incoming.debian.org Packages [498 kB]
+Ign http://incoming.debian.org Translation-en
+Fetched 33.2 MB in 11s (2986 kB/s)
+Reading package lists...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Fetch source files │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Check APT
+─────────
+
+Checking available source versions...
+
+Download source files with APT
+──────────────────────────────
+
+Reading package lists...
+Building dependency tree...
+Reading state information...
+NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
+git://git.debian.org/debian-med/tabix.git
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (80.7 kB/s)
+Download complete and in download only mode
+
+Check arch
+──────────
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install core build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: build-essential, fakeroot
+Checking for already installed dependencies...
+build-essential: already installed (11.5+b1)
+fakeroot: already installed (1.18.2-1)
+Checking for dependency conflicts...
+Installing positive dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+Checking correctness of dependencies...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Install tabix build dependencies (internal resolver) │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
+Checking for already installed dependencies...
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1+b1)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+debhelper: missing
+Using default version 9.20120419
+zlib1g-dev: missing
+Checking for dependency conflicts...
+Installing positive dependencies: debhelper zlib1g-dev
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following extra packages will be installed:
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
+Suggested packages:
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
+Recommended packages:
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
+The following NEW packages will be installed:
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
+Need to get 10.3 MB of archives.
+After this operation, 27.7 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 10.3 MB in 0s (11.6 MB/s)
+Selecting previously unselected package libpipeline1:s390x.
+(Reading database ... 10853 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libmagic1:s390x.
+Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
+Selecting previously unselected package libpcre3:s390x.
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libxml2:s390x.
+Unpacking libxml2:s390x (from .../libxml2_2.7.8.dfsg-9_s390x.deb) ...
+Selecting previously unselected package libffi5:s390x.
+Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
+Selecting previously unselected package libglib2.0-0:s390x.
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
+Selecting previously unselected package libcroco3:s390x.
+Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_s390x.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5+b1_s390x.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:s390x.
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libmagic1:s390x (5.11-1) ...
+Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libxml2:s390x (2.7.8.dfsg-9) ...
+Setting up libffi5:s390x (3.0.10-3+b1) ...
+Setting up libglib2.0-0:s390x (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:s390x (0.6.5-1) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
+Building database of manual pages ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up html2text (1.3.2a-15+b1) ...
+Setting up gettext (0.18.1.1-5+b1) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
+Removing negative dependencies:
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+Checking correctness of dependencies...
+Kernel: Linux 2.6.32-5-s390x s390x (s390x)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+Unpack source
+─────────────
+
+gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Can't check signature: public key not found
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: info: extracting tabix in tabix-0.2.5
+dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
+
+Check disc space
+────────────────
+
+
+dpkg-buildpackage
+─────────────────
+
+dpkg-buildpackage: source package tabix
+dpkg-buildpackage: source version 0.2.5-2
+ dpkg-source --before-build tabix-0.2.5
+dpkg-buildpackage: host architecture s390x
+ fakeroot debian/rules clean
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_auto_test -a
+ fakeroot debian/rules binary-arch
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390x.changes
+dpkg-genchanges: arch-specific upload - not including arch-independent packages
+dpkg-genchanges: binary-only upload - not including any source code
+ dpkg-source --after-build tabix-0.2.5
+dpkg-buildpackage: binary only upload (no source included)
+────────────────────────────────────────────────────────────────────────────────
+Build finished at 20120425-2149
+
+tabix_0.2.5-2_s390x.changes:
+Format: 1.8
+Date: Wed, 25 Apr 2012 17:02:10 +0200
+Source: tabix
+Binary: tabix
+Architecture: s390x
+Version: 0.2.5-2
+Distribution: sid
+Urgency: low
+Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
+Description:
+ tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
+Changes:
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ .
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
+Checksums-Sha1:
+ 430c0c56548851c47209307ffbfe786453fba96d 63986 tabix_0.2.5-2_s390x.deb
+Checksums-Sha256:
+ c5749f750f15ed2b0fb4bc7fa100be78c510816f6f72a1280118a70bdbed2b73 63986 tabix_0.2.5-2_s390x.deb
+Files:
+ 202e6360a875ee25d9b2dc24ccdde142 63986 science optional tabix_0.2.5-2_s390x.deb
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Package contents │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+tabix_0.2.5-2_s390x.deb
+───────────────────────
+
+ new debian package, version 2.0.
+ size 63986 bytes: control archive= 992 bytes.
+ 781 bytes, 16 lines control
+ 653 bytes, 10 lines md5sums
+ Package: tabix
+ Version: 0.2.5-2
+ Architecture: s390x
+ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+ Installed-Size: 164
+ Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3)
+ Section: science
+ Priority: optional
+ Homepage: http://samtools.sourceforge.net/tabix.shtml
+ Description: generic indexer for TAB-delimited genome position files
+ Tabix indexes files where some columns indicate sequence coordinates: name
+ (usually a chromosme), start and stop. The input data file must be position
+ sorted and compressed by bgzip (provided in this package), which has a gzip
+ like interface. After indexing, tabix is able to quickly retrieve data lines by
+ chromosomal coordinates. Fast data retrieval also works over network if an URI
+ is given as a file name.
+
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/bin/
+-rwxr-xr-x root/root 30480 2012-04-25 21:49 ./usr/bin/bgzip
+-rwxr-xr-x root/root 81072 2012-04-25 21:49 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:49 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+lrwxrwxrwx root/root 0 2012-04-25 21:49 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Finished │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Built successfully
+────────────────────────────────────────────────────────────────────────────────
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-1026279f-80f1-4430-bcdb-6f43f7566348/sid-s390x-sbuild/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ
+Not cleaning session: cloned chroot in use
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Summary │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Architecture: s390x
+Build-Space: 1996
+Build-Time: 9
+Distribution: sid
+Install-Time: 7
+Job: tabix_0.2.5-2
+Package: tabix
+Package-Time: 42
+Source-Version: 0.2.5-2
+Space: 1996
+Status: successful
+Version: 0.2.5-2
+────────────────────────────────────────────────────────────────────────────────
+Finished at 20120425-2149
+Build needed 00:00:42, 1996k disc space
+Signature with key 'BE1C5586' requested:
diff --git a/sparc.log b/sparc.log
index 2aa48f9..93afa65 100644
--- a/sparc.log
+++ b/sparc.log
@@ -1,70 +1,71 @@
-From buildd at spontini.debian.org Tue May 10 11:20:22 2011
-Return-path: <buildd at spontini.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:216:35ff:fec4:6340])
+From buildd at stadler.debian.org Wed Apr 25 21:20:00 2012
+Return-path: <buildd at stadler.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at spontini.debian.org>)
- id 1QJkzG-0006rk-E4
- for logs at buildd.debian.org; Tue, 10 May 2011 11:20:22 +0000
-Received: from spontini.debian.org ([2607:f8f0:610:4000:a00:20ff:fea0:918b])
+ (Exim 4.72) (envelope-from <buildd at stadler.debian.org>)
+ id 1SN9d2-0003zO-Gj
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:20:00 +0000
+Received: from stadler.debian.org ([2a02:16a8:dc41:100::ffff])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=spontini.debian.org,
- EMAIL=hostmaster at spontini.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.69) (envelope-from <buildd at spontini.debian.org>)
- id 1QJkzI-0003gJ-7I
- for logs at buildd.debian.org; Tue, 10 May 2011 11:20:24 +0000
-Received: from buildd by spontini.debian.org with local (Exim 4.72)
- (envelope-from <buildd at spontini.debian.org>)
- id 1QJkzB-0001RB-LW; Tue, 10 May 2011 11:20:17 +0000
-Message-Id: <E1QJkzB-0001RB-LW at spontini.debian.org>
+ CN=stadler.debian.org, EMAIL=hostmaster at stadler.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at stadler.debian.org>)
+ id 1SN9d1-0006Ny-Gb
+ for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:59 +0000
+Received: from buildd by stadler.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at stadler.debian.org>)
+ id 1SN9d2-00005b-AE; Wed, 25 Apr 2012 21:20:00 +0000
+Message-Id: <E1SN9d2-00005b-AE at stadler.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 10 May 2011 11:20:17 +0000
-From: buildd on spontini <buildd at spontini.debian.org>
-To: logs at buildd.debian.org,buildd-admin at spontini.debian.org
-Subject: Log for successful build of tabix_0.2.5-1 on sparc (dist=sid)
-Key-Id: 3B3DF88C
+Date: Wed, 25 Apr 2012 21:20:00 +0000
+From: buildd on stadler <buildd at stadler.debian.org>
+To: logs at buildd.debian.org,buildd-admin at stadler.debian.org
+Subject: Log for successful build of tabix_0.2.5-2 on sparc (dist=sid)
+Key-Id: F53143B2
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on spontini.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on stadler.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-1 (sparc) 10 May 2011 11:15 ║
+║ tabix 0.2.5-2 (sparc) 25 Apr 2012 21:15 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-1
-Source Version: 0.2.5-1
+Version: 0.2.5-2
+Source Version: 0.2.5-2
Architecture: sparc
-Get:1 http://mirror-ubc.debian.org unstable InRelease [167 kB]
-Get:2 http://incoming.debian.org unstable InRelease [167 kB]
-Get:3 http://mirror-ubc.debian.org unstable/main Sources [5657 kB]
+Get:1 http://debian.inode.at unstable InRelease [210 kB]
+Get:2 http://incoming.debian.org unstable InRelease [210 kB]
+Get:3 http://debian.inode.at unstable/main Sources [6244 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org Release [1604 B]
-Get:6 http://incoming.debian.org unstable/main Sources [5657 kB]
-Get:7 http://mirror-ubc.debian.org unstable/contrib Sources [51.4 kB]
-Get:8 http://mirror-ubc.debian.org unstable/non-free Sources [97.1 kB]
-Get:9 http://mirror-ubc.debian.org unstable/main sparc Packages [7115 kB]
-Get:10 http://mirror-ubc.debian.org unstable/contrib sparc Packages [54.4 kB]
-Ign http://mirror-ubc.debian.org unstable/contrib TranslationIndex
-Get:11 http://mirror-ubc.debian.org unstable/main TranslationIndex [2264 B]
-Ign http://mirror-ubc.debian.org unstable/contrib Translation-en
-Get:12 http://incoming.debian.org unstable/contrib Sources [51.4 kB]
-Get:13 http://incoming.debian.org unstable/non-free Sources [97.1 kB]
-Get:14 http://incoming.debian.org unstable/main sparc Packages [7115 kB]
-Get:15 http://incoming.debian.org unstable/contrib sparc Packages [54.4 kB]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
+Get:7 http://debian.inode.at unstable/contrib Sources [53.9 kB]
+Get:8 http://debian.inode.at unstable/non-free Sources [97.9 kB]
+Get:9 http://debian.inode.at unstable/main sparc Packages [5832 kB]
+Get:10 http://debian.inode.at unstable/contrib sparc Packages [36.8 kB]
+Ign http://debian.inode.at unstable/contrib TranslationIndex
+Get:11 http://debian.inode.at unstable/main TranslationIndex [2223 B]
+Get:12 http://debian.inode.at unstable/contrib Translation-en [37.0 kB]
+Get:13 http://debian.inode.at unstable/main Translation-en [3943 kB]
+Get:14 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
+Get:15 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:16 http://incoming.debian.org unstable/main sparc Packages [5833 kB]
+Get:17 http://incoming.debian.org unstable/contrib sparc Packages [36.8 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:16 http://incoming.debian.org unstable/main TranslationIndex [2264 B]
-Get:17 http://incoming.debian.org Sources [27.9 kB]
-Get:18 http://incoming.debian.org Packages [545 kB]
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:19 http://incoming.debian.org Sources [33.5 kB]
+Get:20 http://incoming.debian.org Packages [517 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3943 kB]
Ign http://incoming.debian.org Translation-en
-Ign http://incoming.debian.org unstable/contrib Translation-en
-Fetched 26.9 MB in 1min 1s (438 kB/s)
+Fetched 33.5 MB in 1min 11s (469 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -85,11 +86,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.1 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (dsc) [1882 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-1 (diff) [3039 B]
-Fetched 59.1 kB in 0s (94.1 kB/s)
+Need to get 59.7 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
+Fetched 59.7 kB in 0s (95.5 kB/s)
Download complete and in download only mode
Check arch
@@ -103,174 +104,185 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.15.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+The following package was automatically installed and is no longer required:
+ libapt-pkg4.12
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+The following package was automatically installed and is no longer required:
+ libapt-pkg4.12
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), cdbs, debhelper (>= 8), zlib1g-dev
+Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.3)
-base-passwd: already installed (3.5.22+b1)
-bash: already installed (4.1-3)
-coreutils: already installed (8.5-1)
-dash: already installed (0.5.5.1-7.4)
-debianutils: already installed (3.4.4)
-diffutils: already installed (1:3.0-1)
-dpkg: already installed (1.16.0.3)
-e2fsprogs: already installed (1.41.12-4)
-findutils: already installed (4.4.2-1+b2)
-grep: already installed (2.6.3-3)
-gzip: already installed (1.3.12-9)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-1)
-ncurses-bin: already installed (5.9-1)
-perl-base: already installed (5.12.3-6)
+base-files: already installed (6.7)
+base-passwd: already installed (3.5.24)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-3)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.11-2)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.2)
-sysvinit: already installed (2.88dsf-13.2)
-tar: already installed (1.25-3)
-bsdutils: already installed (1:2.17.2-9.1)
-mount: already installed (2.17.2-9.1)
-util-linux: already installed (2.17.2-9.1)
-libc6-dev: already installed (2.13-2)
-libc6-dev-sparc64: already installed (2.13-2)
-gcc: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.4.5-9 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.0.3 >= 1.13.5 is satisfied)
-cdbs: missing
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+libc6-dev-sparc64: already installed (2.13-27)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 8.1.6
+Using default version 9.20120419
zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies: cdbs debhelper zlib1g-dev
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
+The following package was automatically installed and is no longer required:
+ libapt-pkg4.12
+Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
- man-db po-debconf
+ libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
+ libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc groff less
- www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- xml-core libmail-sendmail-perl
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libglib2.0-0 libmagic1 libpcre3 libpipeline1
- libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 5 not upgraded.
-Need to get 9220 kB of archives.
-After this operation, 28.2 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils sparc 8.2.2 [205 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main groff-base sparc 1.21-5 [1152 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.0-1 [35.8 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main man-db sparc 2.6.0.2-1 [1013 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 sparc 5.04-5+b1 [239 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main file sparc 5.04-5+b1 [49.6 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base sparc 0.18.1.1-3 [140 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 sparc 8.12-3 [265 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-2+b1 [840 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.28.6-1 [1556 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 sparc 0.6.2-1 [119 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-4 [424 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main gettext sparc 0.18.1.1-3 [2006 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu1 [223 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 8.1.6 [557 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.93 [75.5 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.3.4.dfsg-3 [189 kB]
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+0 upgraded, 19 newly installed, 0 to remove and 21 not upgraded.
+Need to get 9619 kB of archives.
+After this operation, 25.6 MB of additional disk space will be used.
+Get:1 http://debian.inode.at/debian/ unstable/main libpipeline1 sparc 1.2.1-1 [35.8 kB]
+Get:2 http://debian.inode.at/debian/ unstable/main libmagic1 sparc 5.11-1 [249 kB]
+Get:3 http://debian.inode.at/debian/ unstable/main libpcre3 sparc 1:8.30-4 [246 kB]
+Get:4 http://debian.inode.at/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-9 [820 kB]
+Get:5 http://debian.inode.at/debian/ unstable/main libffi5 sparc 3.0.10-3 [22.7 kB]
+Get:6 http://debian.inode.at/debian/ unstable/main libglib2.0-0 sparc 2.32.0-4 [1902 kB]
+Get:7 http://debian.inode.at/debian/ unstable/main libcroco3 sparc 0.6.5-1 [135 kB]
+Get:8 http://debian.inode.at/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
+Get:9 http://debian.inode.at/debian/ unstable/main bsdmainutils sparc 9.0.1 [205 kB]
+Get:10 http://debian.inode.at/debian/ unstable/main groff-base sparc 1.21-7 [1123 kB]
+Get:11 http://debian.inode.at/debian/ unstable/main man-db sparc 2.6.1-2 [1031 kB]
+Get:12 http://debian.inode.at/debian/ unstable/main file sparc 5.11-1 [52.7 kB]
+Get:13 http://debian.inode.at/debian/ unstable/main gettext-base sparc 0.18.1.1-5 [140 kB]
+Get:14 http://debian.inode.at/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
+Get:15 http://debian.inode.at/debian/ unstable/main gettext sparc 0.18.1.1-5 [1983 kB]
+Get:16 http://debian.inode.at/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:17 http://debian.inode.at/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:18 http://debian.inode.at/debian/ unstable/main debhelper all 9.20120419 [694 kB]
+Get:19 http://debian.inode.at/debian/ unstable/main zlib1g-dev sparc 1:1.2.6.dfsg-2 [209 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9220 kB in 1s (4712 kB/s)
-Selecting previously deselected package bsdmainutils.
-(Reading database ... 10783 files and directories currently installed.)
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.2_sparc.deb) ...
-Selecting previously deselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-5_sparc.deb) ...
-Selecting previously deselected package libpipeline1.
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-1_sparc.deb) ...
-Selecting previously deselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-1_sparc.deb) ...
-Selecting previously deselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_sparc.deb) ...
-Selecting previously deselected package file.
-Unpacking file (from .../file_5.04-5+b1_sparc.deb) ...
-Selecting previously deselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-3_sparc.deb) ...
-Selecting previously deselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-3_sparc.deb) ...
-Selecting previously deselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-2+b1_sparc.deb) ...
-Selecting previously deselected package html2text.
+Fetched 9619 kB in 2s (4460 kB/s)
+Selecting previously unselected package libpipeline1:sparc.
+(Reading database ... 11180 files and directories currently installed.)
+Unpacking libpipeline1:sparc (from .../libpipeline1_1.2.1-1_sparc.deb) ...
+Selecting previously unselected package libmagic1:sparc.
+Unpacking libmagic1:sparc (from .../libmagic1_5.11-1_sparc.deb) ...
+Selecting previously unselected package libpcre3:sparc.
+Unpacking libpcre3:sparc (from .../libpcre3_1%3a8.30-4_sparc.deb) ...
+Selecting previously unselected package libxml2:sparc.
+Unpacking libxml2:sparc (from .../libxml2_2.7.8.dfsg-9_sparc.deb) ...
+Selecting previously unselected package libffi5:sparc.
+Unpacking libffi5:sparc (from .../libffi5_3.0.10-3_sparc.deb) ...
+Selecting previously unselected package libglib2.0-0:sparc.
+Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.32.0-4_sparc.deb) ...
+Selecting previously unselected package libcroco3:sparc.
+Unpacking libcroco3:sparc (from .../libcroco3_0.6.5-1_sparc.deb) ...
+Selecting previously unselected package libunistring0:sparc.
+Unpacking libunistring0:sparc (from .../libunistring0_0.9.3-5_sparc.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_sparc.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_sparc.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_sparc.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_sparc.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_sparc.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_sparc.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_sparc.deb) ...
-Selecting previously deselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_sparc.deb) ...
-Selecting previously deselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_sparc.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_sparc.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_sparc.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.1.6_all.deb) ...
-Selecting previously deselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.93_all.deb) ...
-Selecting previously deselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_sparc.deb) ...
-Setting up bsdmainutils (8.2.2) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Selecting previously unselected package zlib1g-dev:sparc.
+Unpacking zlib1g-dev:sparc (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_sparc.deb) ...
+Setting up libpipeline1:sparc (1.2.1-1) ...
+Setting up libmagic1:sparc (5.11-1) ...
+Setting up libpcre3:sparc (1:8.30-4) ...
+Setting up libxml2:sparc (2.7.8.dfsg-9) ...
+Setting up libffi5:sparc (3.0.10-3) ...
+Setting up libglib2.0-0:sparc (2.32.0-4) ...
+No schema files found: doing nothing.
+Setting up libcroco3:sparc (0.6.5-1) ...
+Setting up libunistring0:sparc (0.9.3-5) ...
+Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-5) ...
-Setting up libpipeline1 (1.2.0-1) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-2+b1) ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.1.6) ...
-Setting up cdbs (0.4.93) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120419) ...
+Setting up zlib1g-dev:sparc (1:1.2.6.dfsg-2) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+The following package was automatically installed and is no longer required:
+ libapt-pkg4.12
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-sparc64-smp sparc (sparc64)
-Toolchain package versions: binutils_2.21.51.20110421-4 dpkg-dev_1.16.0.3 g++-4.4_4.4.6-3 gcc-4.4_4.4.6-3 libc6-dev_2.13-2 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-3 linux-libc-dev_2.6.38-4
-Package versions: apt_0.8.14.1 base-files_6.3 base-passwd_3.5.22+b1 bash_4.1-3 binutils_2.21.51.20110421-4 bsdmainutils_8.2.2 bsdutils_1:2.17.2-9.1 build-essential_11.5 bzip2_1.0.5-6 cdbs_0.4.93 coreutils_8.5-1 cpp_4:4.4.5-9 cpp-4.4_4.4.6-3 dash_0.5.5.1-7.4 debconf_1.5.39 debfoster_2.7-1.1 debhelper_8.1.6 debian-archive-keyring_2010.08.28 debianutils_3.4.4 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.41.12-4 e2fsprogs_1.41.12-4 fakeroot_1.15.1-1 file_5.04-5+b1 findutils_4.4.2-1+b2 g++_4:4.4.5-9 g++-4.4_4.4.6-3 gcc_4:4.4.5-9 gcc-4.4_4.4.6-3 gcc-4.4-base_4.4.6-3 gcc-4.6-base_4.6.0-6 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.6.3-3 groff-base_1.21-5 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.2 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.49-4 libattr1_1:2.4.44-2 libblkid1_2.17.2-9.1 libbz2-1.0_1.0.5-6 libc-bin_2.13-2 libc-dev-bin_2.13-2 libc6_2.13-2 libc6-dev_2.13-2 libc6-dev-sparc64_2.13-2 libc6-sparc64_2.13-2 libcomerr2_1.41.12-4 libcroco3_0.6.2-1 libdb5.1_5.1.25-10 libdpkg-perl_1.16.0.3 libgc1c2_1:7.1-7 libgcc1_1:4.6.0-6 libgdbm3_1.8.3-9+b1 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgomp1_4.6.0-6 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmpfr4_3.0.1-3 libncurses5_5.9-1 libpam-modules_1.1.2-3 libpam-runtime_1.1.2-3 libpam0g_1.1.2-3 libpcre3_8.12-3 libpipeline1_1.2.0-1 libreadline6_6.2-1 libselinux1_2.0.98-1+b1 libsepol1_2.0.42-1 libss2_1.41.12-4 libstdc++6_4.6.0-6 libstdc++6-4.4-dev_4.4.6-3 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.17.2-9.1 libxml2_2.7.8.dfsg-2+b1 linux-libc-dev_2.6.38-4 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15+b1 mount_2.17.2-9.1 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-1 perl_5.12.3-6 perl-base_5.12.3-6 perl-modules_5.12.3-6 po-debconf_1.0.16+nmu1 readline-common_6.2-1 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.7.4p6-1 sysv-rc_2.88dsf-13.2 sysvinit_2.88dsf-13.2 sysvinit-utils_2.88dsf-13.2 tar_1.25-3 tzdata_2011g-1 util-linux_2.17.2-9.1 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-2 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.0 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libc6-dev-sparc64_2.13-27 libc6-sparc64_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libss2_1.42.2-2 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -281,12 +293,14 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue May 10 10:44:46 2011 UTC using RSA key ID 2295D502
+gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-1.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-1.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: applying count-set-but-not-used.patch
+dpkg-source: info: applying use-dpkg-buildflags.patch
Check disc space
────────────────
@@ -295,142 +309,166 @@ Check disc space
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-1
+dpkg-buildpackage: source version 0.2.5-2
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture sparc
fakeroot debian/rules clean
-test -x debian/rules
-dh_testroot
-rm -f debian/stamp-makefile-build debian/stamp-makefile-install
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS="" -k clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
+dh clean
+ dh_testdir
+ dh_auto_clean
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-dh_clean
- debian/rules build
-test -x debian/rules
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-/usr/bin/make -C . CFLAGS="-g -O2 -g -O2 -Wall" CXXFLAGS="-g -O2 -g -O2 -Wall" CPPFLAGS="" LDFLAGS=""
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+ dh_clean
+ debian/rules build-arch
+dh build-arch
+ dh_testdir -a
+ dh_auto_configure -a
+ dh_auto_build -a
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+knetfile.c: In function 'khttp_connect_file':
+knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+knetfile.c: In function 'kftp_send_cmd':
+knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -O2 -g -O2 -Wall -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -g -O2 -g -O2 -Wall -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
-gcc -g -O2 -g -O2 -Wall -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-1-sparc-iXzA_1/tabix-0.2.5'
-touch debian/stamp-makefile-build
-DEB_MAKE_CHECK_TARGET unset, not running checks
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
+gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+bgzip.c: In function 'main':
+bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
+bgzip.c: In function 'write_open':
+bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
+gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+ dh_auto_test -a
fakeroot debian/rules binary-arch
-test -x debian/rules
-dh_testroot
-dh_prep
-dh_installdirs -A
-mkdir -p "."
-/usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_COMPRESS_EXCLUDE is a deprecated variable
-DEB_MAKE_CHECK_TARGET unset, not running checks
-DEB_MAKE_INSTALL_TARGET unset, skipping default makefile.mk common-install target
-Adding cdbs dependencies to debian/tabix.substvars
-dh_installdirs -ptabix
-dh_installdocs -ptabix ./NEWS
-dh_installexamples -ptabix
-dh_installman -ptabix
-dh_installinfo -ptabix
-dh_installmenu -ptabix
-dh_installcron -ptabix
-dh_installinit -ptabix
-dh_installdebconf -ptabix
-dh_installemacsen -ptabix
-dh_installcatalogs -ptabix
-dh_installpam -ptabix
-dh_installlogrotate -ptabix
-dh_installlogcheck -ptabix
-dh_installgsettings -ptabix
-dh_installchangelogs -ptabix ./ChangeLog
-dh_installudev -ptabix
-dh_lintian -ptabix
-dh_bugfiles -ptabix
-dh_install -ptabix
-dh_link -ptabix
-dh_installmime -ptabix
-dh_strip -ptabix
-dh_compress -ptabix -X .tbi
-dh_fixperms -ptabix
-dh_makeshlibs -ptabix
-dh_installdeb -ptabix
-dh_perl -ptabix
-dh_shlibdeps -ptabix
-dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
-dh_gencontrol -ptabix
-dh_md5sums -ptabix
-dh_builddeb -ptabix
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-1_sparc.deb'.
- dpkg-genchanges -B -msparc Build Daemon (spontini) <buildd_sparc-spontini at buildd.debian.org> >../tabix_0.2.5-1_sparc.changes
+dh binary-arch
+ dh_testroot -a
+ dh_prep -a
+ dh_installdirs -a
+ dh_auto_install -a
+ dh_install -a
+ dh_installdocs -a
+ dh_installchangelogs -a
+ dh_installexamples -a
+ dh_installman -a
+ dh_installcatalogs -a
+ dh_installcron -a
+ dh_installdebconf -a
+ dh_installemacsen -a
+ dh_installifupdown -a
+ dh_installinfo -a
+ dh_installinit -a
+ dh_installmenu -a
+ dh_installmime -a
+ dh_installmodules -a
+ dh_installlogcheck -a
+ dh_installlogrotate -a
+ dh_installpam -a
+ dh_installppp -a
+ dh_installudev -a
+ dh_installwm -a
+ dh_installxfonts -a
+ dh_installgsettings -a
+ dh_bugfiles -a
+ dh_ucf -a
+ dh_lintian -a
+ dh_gconf -a
+ dh_icons -a
+ dh_perl -a
+ dh_usrlocal -a
+ dh_link -a
+ debian/rules override_dh_compress
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+dh_compress --exclude=.tbi
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+ dh_fixperms -a
+ dh_strip -a
+ dh_makeshlibs -a
+ dh_shlibdeps -a
+dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+ dh_installdeb -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_sparc.deb'.
+ dpkg-genchanges -B -mStalder <buildd_sparc-stadler at buildd.debian.org> >../tabix_0.2.5-2_sparc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110510-1120
+Build finished at 20120425-2119
-tabix_0.2.5-1_sparc.changes:
+tabix_0.2.5-2_sparc.changes:
Format: 1.8
-Date: Tue, 10 May 2011 19:42:07 +0900
+Date: Wed, 25 Apr 2012 17:02:10 +0200
Source: tabix
Binary: tabix
Architecture: sparc
-Version: 0.2.5-1
+Version: 0.2.5-2
Distribution: sid
Urgency: low
-Maintainer: sparc Build Daemon (spontini) <buildd_sparc-spontini at buildd.debian.org>
-Changed-By: Charles Plessy <plessy at debian.org>
+Maintainer: Stalder <buildd_sparc-stadler at buildd.debian.org>
+Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
+Closes: 626267
Changes:
- tabix (0.2.5-1) unstable; urgency=low
+ tabix (0.2.5-2) unstable; urgency=low
+ .
+ [ Charles Plessy ]
+ 7a09003 Added metadata about Upstream in debian/upstream.
+ 1a85d96 Refreshed Debian copyright file
+ 9c70833 Include 7 digits of the commit ID in the changelog entry.
.
- * New upstream release.
- * Added debian/README.test to explain how to test tabix and bgzip.
+ [ Andreas Tille ]
+ * debian/patches/count-set-but-not-used.patch: uncomment unused
+ variable
+ Closes: #626267
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - removed cdbs from Build-Depends
+ * debian/rules: Switched to dh to easily enable hardening flags
+ * debhelper 9 (control+compat) to enable building with hardening
+ flags
+ * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
+ * debian/watch: Use sf.net redirector
Checksums-Sha1:
- 11e5f13ff588cc1aaecfd7c290852280972ab343 54960 tabix_0.2.5-1_sparc.deb
+ 9780653c13007906833ba2e7b98358690f3771d1 59962 tabix_0.2.5-2_sparc.deb
Checksums-Sha256:
- 8841209c696c2842c8a50cfe603076c6ba6dbea1a43d365bebf5642f73e2403c 54960 tabix_0.2.5-1_sparc.deb
+ 36079de766bf02977dce43cdf9c03c847b0046f40c186093ae4d759f0fbd1247 59962 tabix_0.2.5-2_sparc.deb
Files:
- 5d4f1a2571d7baeeedf33fa4dc5c68a5 54960 science optional tabix_0.2.5-1_sparc.deb
+ f774b4973123b406e01e635d7f22c6c0 59962 science optional tabix_0.2.5-2_sparc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-1_sparc.deb
+tabix_0.2.5-2_sparc.deb
───────────────────────
new debian package, version 2.0.
- size 54960 bytes: control archive= 993 bytes.
- 785 bytes, 16 lines control
+ size 59962 bytes: control archive= 992 bytes.
+ 780 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-1
+ Version: 0.2.5-2
Architecture: sparc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 168
- Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
+ Installed-Size: 144
+ Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
Homepage: http://samtools.sourceforge.net/tabix.shtml
@@ -442,26 +480,26 @@ tabix_0.2.5-1_sparc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2011-05-10 10:40 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/bin/
+-rwxr-xr-x root/root 68156 2012-04-25 21:19 ./usr/bin/tabix
+-rwxr-xr-x root/root 23452 2012-04-25 21:19 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-04-25 21:19 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 1473 2011-05-10 09:40 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 322 2011-05-10 10:42 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2011-05-10 11:19 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2011-05-10 11:19 ./usr/bin/
--rwxr-xr-x root/root 22664 2011-05-10 11:19 ./usr/bin/bgzip
--rwxr-xr-x root/root 65792 2011-05-10 11:19 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2011-05-10 11:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+lrwxrwxrwx root/root 0 2012-04-25 21:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -475,7 +513,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-sparc-sbuild-53c9c6b3-7b1d-4e8c-be29-e5d178f2df8a/build/buildd-tabix_0.2.5-1-sparc-iXzA_1
+Purging /var/lib/schroot/mount/sid-sparc-sbuild-9151ea23-9715-4695-a89e-29862190b57e/build/buildd-tabix_0.2.5-2-sparc-K2jvsv
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -483,18 +521,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: sparc
-Build-Space: 1340
-Build-Time: 90
+Build-Space: 1512
+Build-Time: 69
Distribution: sid
-Install-Time: 74
-Job: tabix_0.2.5-1
+Install-Time: 66
+Job: tabix_0.2.5-2
Package: tabix
-Package-Time: 267
-Source-Version: 0.2.5-1
-Space: 1340
+Package-Time: 241
+Source-Version: 0.2.5-2
+Space: 1512
Status: successful
-Version: 0.2.5-1
+Version: 0.2.5-2
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110510-1120
-Build needed 00:04:27, 1340k disc space
-Signature with key '3B3DF88C' requested:
+Finished at 20120425-2119
+Build needed 00:04:01, 1512k disc space
+Signature with key 'F53143B2' requested:
--
Generic indexer for TAB-delimited genome position files.
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