[med-svn] [SCM] tabix branch, meta, updated. meta/0.2.3-1-7-g1794f4f
Charles Plessy
plessy at debian.org
Fri Jun 22 04:43:51 UTC 2012
The following commit has been merged in the meta branch:
commit 2c7cd2851a132407f28d2a90324cfcef474b0e2c
Author: Charles Plessy <plessy at debian.org>
Date: Fri Jun 22 13:37:57 2012 +0900
tabix 0.2.5-3
diff --git a/armel.log b/armel.log
index 7e2b66b..7f8985b 100644
--- a/armel.log
+++ b/armel.log
@@ -1,69 +1,65 @@
-From buildd at ancina.debian.org Wed Apr 25 21:22:54 2012
-Return-path: <buildd at ancina.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at arnold.debian.org Sat May 12 09:15:37 2012
+Return-path: <buildd at arnold.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at ancina.debian.org>)
- id 1SN9fq-0004Ob-2h
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:22:54 +0000
-Received: from ancina.ugent.be ([157.193.39.13] helo=ancina.debian.org)
+ (Exim 4.72) (envelope-from <buildd at arnold.debian.org>)
+ id 1ST8QL-0004P6-LR
+ for logs at buildd.debian.org; Sat, 12 May 2012 09:15:37 +0000
+Received: from arnold.islands.arm.com ([217.140.96.57] helo=arnold.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=ancina.debian.org, EMAIL=hostmaster at ancina.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at ancina.debian.org>)
- id 1SN9fp-0006h1-77
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:22:53 +0000
-Received: from buildd by ancina.debian.org with local (Exim 4.72)
- (envelope-from <buildd at ancina.debian.org>)
- id 1SN9fo-0001dx-Ld; Wed, 25 Apr 2012 21:22:52 +0000
-Message-Id: <E1SN9fo-0001dx-Ld at ancina.debian.org>
-MIME-Version: 1.0
-Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:22:52 +0000
-From: buildd on ancina <buildd at ancina.debian.org>
-To: buildd-porters at ancina.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on armel (dist=sid)
-Key-Id: DD902B75
+ CN=arnold.debian.org, EMAIL=hostmaster at arnold.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at arnold.debian.org>)
+ id 1ST8QK-0002AW-Mv
+ for logs at buildd.debian.org; Sat, 12 May 2012 09:15:36 +0000
+Received: from buildd by arnold.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at arnold.debian.org>)
+ id 1ST8QJ-00006T-Fd; Sat, 12 May 2012 09:15:35 +0000
+Date: Sat, 12 May 2012 09:15:35 +0000
+Message-Id: <E1ST8QJ-00006T-Fd at arnold.debian.org>
+From: buildd on arnold <buildd at arnold.debian.org>
+To: buildd-porters at arnold.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on armel (dist=sid)
+Content-Type: text/plain; charset=UTF-8
+Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ancina.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on arnold.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (armel) 25 Apr 2012 21:20 ║
+║ tabix 0.2.5-3 (armel) 12 mai 2012 09:09 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: armel
-Hit http://ftp.de.debian.org sid InRelease
-Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid InRelease
+Get:1 http://ftp.uk.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6280 kB]
Ign http://incoming.debian.org InRelease
-Hit http://ftp.de.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.de.debian.org sid/main armel Packages/DiffIndex
-Hit http://ftp.de.debian.org sid/contrib armel Packages/DiffIndex
-Ign http://ftp.de.debian.org sid/contrib TranslationIndex
-Hit http://ftp.de.debian.org sid/main TranslationIndex
-Get:1 http://incoming.debian.org Release.gpg [836 B]
-Hit http://ftp.de.debian.org sid/contrib Translation-en
-Hit http://ftp.de.debian.org sid/main Translation-en
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main armel Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib armel Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Get:2 http://incoming.debian.org Release [1601 B]
-Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
-Get:3 http://incoming.debian.org Sources [31.9 kB]
-Get:4 http://incoming.debian.org Packages [519 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6280 kB]
+Get:7 http://ftp.uk.debian.org unstable/contrib Sources [54.7 kB]
+Get:8 http://ftp.uk.debian.org unstable/non-free Sources [96.6 kB]
+Get:9 http://ftp.uk.debian.org unstable/main armel Packages [5845 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:12 http://incoming.debian.org unstable/main armel Packages [5845 kB]
+Get:13 http://ftp.uk.debian.org unstable/contrib armel Packages [37.1 kB]
+Get:14 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:15 http://ftp.uk.debian.org unstable/main Translation-en [3952 kB]
+Get:16 http://incoming.debian.org unstable/contrib armel Packages [37.1 kB]
+Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3952 kB]
+Get:19 http://incoming.debian.org Sources [43.1 kB]
+Get:20 http://incoming.debian.org Packages [713 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 553 kB in 10s (55.1 kB/s)
+Fetched 33.8 MB in 2min 23s (235 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +80,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (96.5 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (142 kB/s)
Download complete and in download only mode
Check arch
@@ -102,66 +98,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -173,18 +121,18 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
+coreutils: already installed (8.13-3.2)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.3)
e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-grep: already installed (2.10-1)
+grep: already installed (2.11-3)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
+ncurses-base: already installed (5.9-7)
+ncurses-bin: already installed (5.9-7)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -194,76 +142,137 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+libc6-dev: already installed (2.13-32)
+gcc: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
-debhelper: already installed (9.20120410 >= 9 is satisfied)
-zlib1g-dev: already installed (1:1.2.6.dfsg-2)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
+debhelper: missing
+Using default version 9.20120509
+zlib1g-dev: missing
Checking for dependency conflicts...
-Installing positive dependencies:
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
+The following extra packages will be installed:
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+Suggested packages:
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
+Recommended packages:
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
+The following NEW packages will be installed:
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+0 upgraded, 21 newly installed, 0 to remove and 19 not upgraded.
+Need to get 9665 kB of archives.
+After this operation, 24.9 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armel 1.2.1-1 [34.9 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armel 0.18.1.1-7 [26.3 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armel 5.11-1 [251 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armel 1:8.30-5 [241 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armel 2.7.8.dfsg-9 [819 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armel 3.0.10-3 [22.8 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armel 2.32.2-1 [1962 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armel 0.6.5-1 [142 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armel 0.9.3-5 [406 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo0 armel 0.18.1.1-7 [130 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armel 9.0.1 [208 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main groff-base armel 1.21-7 [1071 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main man-db armel 2.6.1-2 [1034 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main file armel 5.11-1 [52.9 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armel 0.18.1.1-7 [135 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main html2text armel 1.3.2a-15 [97.0 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main gettext armel 0.18.1.1-7 [1874 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armel 1:1.2.7.dfsg-1 [210 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 9665 kB in 4s (2215 kB/s)
+Selecting previously unselected package libpipeline1:armel.
+(Reading database ... 10643 files and directories currently installed.)
+Unpacking libpipeline1:armel (from .../libpipeline1_1.2.1-1_armel.deb) ...
+Selecting previously unselected package libasprintf0c2:armel.
+Unpacking libasprintf0c2:armel (from .../libasprintf0c2_0.18.1.1-7_armel.deb) ...
+Selecting previously unselected package libmagic1:armel.
+Unpacking libmagic1:armel (from .../libmagic1_5.11-1_armel.deb) ...
+Selecting previously unselected package libpcre3:armel.
+Unpacking libpcre3:armel (from .../libpcre3_1%3a8.30-5_armel.deb) ...
+Selecting previously unselected package libxml2:armel.
+Unpacking libxml2:armel (from .../libxml2_2.7.8.dfsg-9_armel.deb) ...
+Selecting previously unselected package libffi5:armel.
+Unpacking libffi5:armel (from .../libffi5_3.0.10-3_armel.deb) ...
+Selecting previously unselected package libglib2.0-0:armel.
+Unpacking libglib2.0-0:armel (from .../libglib2.0-0_2.32.2-1_armel.deb) ...
+Selecting previously unselected package libcroco3:armel.
+Unpacking libcroco3:armel (from .../libcroco3_0.6.5-1_armel.deb) ...
+Selecting previously unselected package libunistring0:armel.
+Unpacking libunistring0:armel (from .../libunistring0_0.9.3-5_armel.deb) ...
+Selecting previously unselected package libgettextpo0:armel.
+Unpacking libgettextpo0:armel (from .../libgettextpo0_0.18.1.1-7_armel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_armel.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_armel.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_armel.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_armel.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_armel.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-7_armel.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
+Selecting previously unselected package zlib1g-dev:armel.
+Unpacking zlib1g-dev:armel (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_armel.deb) ...
+Setting up libpipeline1:armel (1.2.1-1) ...
+Setting up libasprintf0c2:armel (0.18.1.1-7) ...
+Setting up libmagic1:armel (5.11-1) ...
+Setting up libpcre3:armel (1:8.30-5) ...
+Setting up libxml2:armel (2.7.8.dfsg-9) ...
+Setting up libffi5:armel (3.0.10-3) ...
+Setting up libglib2.0-0:armel (2.32.2-1) ...
+No schema files found: doing nothing.
+Setting up libcroco3:armel (0.6.5-1) ...
+Setting up libunistring0:armel (0.9.3-5) ...
+Setting up libgettextpo0:armel (0.18.1.1-7) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
+Building database of manual pages ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-7) ...
+Setting up html2text (1.3.2a-15) ...
+Setting up gettext (0.18.1.1-7) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:armel (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32 armel (armv5tel)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.4_4.4.7-1 g++-4.6_4.6.3-3 gcc-4.4_4.4.7-1 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.4-dev_4.4.7-1 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.14-1
-Package versions: adduser_3.113+nmu1 apex-nslu2_1.6.10 apt_0.8.15.10 apt-utils_0.8.15.10 aspell_0.60.7~20110707-1 aspell-en_7.1-0-1 autoconf_2.68-1 automake_1:1.11.4-1 autopoint_0.18.1.1-5 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 bc_1.06.95-2 bf-utf-source_0.05-0.1 binfmt-support_2.0.8 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 ca-certificates_20120212 ca-certificates-java_20120225 camlidl_1.05-14 cdbs_0.4.111 cmake_2.8.7-4 cmake-data_2.8.7-4 coreutils_8.13-3.1 cpio_2.11-7 cpp_4:4.6.3-4 cpp-4.4_4.4.7-1 cpp-4.6_4.6.3-3 dash_0.5.7-3 dctrl-tools_2.21.1 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debiandoc-sgml_1.2.26 debianutils_4.3 default-jre-headless_1:1.6-47 devio_1.2-1+b1 dh-autoreconf_6 dh-buildinfo_0.9 dictionaries-common_1.12.5 diffstat_1.55-2 diffutils_1:3.2-2 dmsetup_2:1.02.67-2 dns323-firmware-tools_0.3-2 docbook-xml_4.5-7 docbook-xsl_1.76.1+dfsg-1 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 emacsen-common_1.4.23 fakeroot_1.18.2-1 fastjar_2:0.98-3 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-4 g++-4.4_4.4.7-1 g++-4.6_4.6.3-3 gawk_1:4.0.1+dfsg-1 gcc_4:4.6.3-4 gcc-4.2-base_4.2.4-6 gcc-4.4_4.4.7-1 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gconf-service_3.2.3-4 gconf2-common_3.2.3-4 gdc-4.4_1.063-4.4.7-1 gdc-v1_4.6.3-4 genext2fs_1.4.1-4 genisoimage_9:1.1.11-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 ghc_7.4.1-2+b1 ghc-haddock_7.4.1-2+b1 ghc-prof_7.4.1-2+b1 gir1.2-atk-1.0_2.4.0-2 gir1.2-freedesktop_1.32.1-1 gir1.2-glib-2.0_1.32.1-1 gir1.2-pango-1.0_1.30.0-1 git_1:1.7.10-1 git-man_1:1.7.10-1 gnat_4.6 gnat-4.6_4.6.3-2 gnat-4.6-base_4.6.3-2 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 haskell-devscripts_0.8.12 hdf5-helpers_1.8.8-9 hostname_3.11 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libbit-vector-perl_7.2-1 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbluray-dev_1:0.2.2-1 libbluray1_1:0.2.2-1 libbogl-dev_0.1.18-6 libbogl0_0.1.18-6 libbsd-dev_0.3.0-2 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libc6-pic_2.13-27 libcaca-dev_0.99.beta18-1 libcaca0_0.99.beta18-1 libcairo-gobject2_1.12.0-2 libcairo-script-interpreter2_1.12.0-2 libcairo2_1.12.0-2 libcairo2-dev_1.12.0-2 libcamd2.2.0_1:3.4.0-2 libcap2_1:2.22-1 libcarp-clan-perl_6.04-1 libccolamd2.7.1_1:3.4.0-2 libcddb2_1.3.2-3 libcddb2-dev_1.3.2-3 libcdio-dev_0.81-5 libcdio10_0.81-5 libcholmod1.7.1_1:3.4.0-2 libclass-isa-perl_0.36-3 libcolamd2.7.1_1:3.4.0-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcups2_1.5.2-5 libcurl3_7.25.0-1 libcurl3-gnutls_7.25.0-1 libcxsparse2.2.3_1:3.4.0-2 libdatrie1_0.2.5-3 libdb4.8_4.8.30-11 libdb5.1_5.1.29-1 libdbus-1-3_1.5.12-1 libdbus-1-dev_1.5.12-1 libdbus-glib-1-2_0.98-1 libdc1394-22_2.2.0-2 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libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libsgmls-perl_1.03ii-32 libshout3_2.2.2-8 libshout3-dev_2.2.2-8 libsidplay2_2.1.1-13 libsidplay2-dev_2.1.1-13 libsigsegv2_2.9-4 libslang2_2.2.4-8 libslang2-dev_2.2.4-8 libslang2-pic_2.2.4-8 libsm-dev_2:1.2.1-2 libsm6_2:1.2.1-2 libsmbclient_2:3.6.3-2 libsmbclient-dev_2:3.6.3-2 libsndfile1_1.0.25-4 libsp1c2_1.3.4-1.2.1-47.1 libspeex-dev_1.2~rc1-3 libspeex1_1.2~rc1-3 libspeexdsp-dev_1.2~rc1-3 libspeexdsp1_1.2~rc1-3 libsqlite3-0_3.7.11-2 libss2_1.42.2-2 libssh2-1_1.4.1-1 libssl-dev_1.0.1-4 libssl1.0.0_1.0.1-4 libstdc++6_4.7.0-3 libstdc++6-4.4-dev_4.4.7-1 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libswscale-dev_5:0.8.1-4 libswscale2_5:0.8.1-4 libtag1-dev_1.7-2 libtag1-vanilla_1.7-2 libtag1c2a_1.7-2 libtalloc2_2.0.7+git20120207-1 libtar-dev_1.2.11-8 libtar0_1.2.11-8 libtasn1-3_2.12-1 libtasn1-3-dev_2.12-1 libtdb1_1.2.10-1 libtext-format-perl_0.53-1 libtext-iconv-perl_1.7-5 libthai-data_0.1.17-1 libthai0_0.1.17-1 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libx11-6_2:1.4.99.901-1 libx11-data_2:1.4.4-4 libx11-dev_2:1.4.99.901-1 libx11-xcb-dev_2:1.4.4-4 libx11-xcb1_2:1.4.4-4 libx264-120_2:0.120.2171+git01f7a33-3 libx264-dev_2:0.120.2171+git01f7a33-3 libxau-dev_1:1.0.7-1 libxau6_1:1.0.7-1 libxcb-composite0_1.8.1-1 libxcb-composite0-dev_1.8.1-1 libxcb-keysyms1_0.3.8-1 libxcb-keysyms1-dev_0.3.8-1 libxcb-randr0_1.8.1-1 libxcb-randr0-dev_1.8.1-1 libxcb-render0_1.8.1-1 libxcb-render0-dev_1.8.1-1 libxcb-shape0_1.8.1-1 libxcb-shape0-dev_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb-shm0-dev_1.8.1-1 libxcb-xfixes0_1.8.1-1 libxcb-xfixes0-dev_1.8.1-1 libxcb-xv0_1.8.1-1 libxcb-xv0-dev_1.8.1-1 libxcb1_1.8.1-1 libxcb1-dev_1.8.1-1 libxcomposite-dev_1:0.4.3-2 libxcomposite1_1:0.4.3-2 libxcursor-dev_1:1.1.12-1 libxcursor1_1:1.1.12-1 libxdamage-dev_1:1.1.3-2 libxdamage1_1:1.1.3-2 libxdmcp-dev_1:1.1.0-4 libxdmcp6_1:1.1.0-4 libxext-dev_2:1.3.0-3 libxext6_2:1.3.0-3 libxfixes-dev_1:5.0-4 libxfixes3_1:5.0-4 libxft-dev_2.2.0-3 libxft2_2.2.0-3 libxi-dev_2:1.4.5-1.1 libxi6_2:1.4.5-1.1 libxinerama-dev_2:1.1.1-3 libxinerama1_2:1.1.1-3 libxml-dom-perl_1.44-1 libxml-parser-perl_2.41-1+b1 libxml-perl_0.08-2 libxml-regexp-perl_0.04-1 libxml2_2.7.8.dfsg-7 libxml2-dev_2.7.8.dfsg-7 libxml2-utils_2.7.8.dfsg-7 libxmlrpc-core-c3_1.16.33-3.1 libxpm-dev_1:3.5.9-4 libxpm4_1:3.5.9-4 libxrandr-dev_2:1.3.2-2 libxrandr2_2:1.3.2-2 libxrender-dev_1:0.9.6-2 libxrender1_1:0.9.6-2 libxslt1.1_1.1.26-8 libxss-dev_1:1.2.1-2 libxss1_1:1.2.1-2 libxt-dev_1:1.1.1-2 libxt6_1:1.1.1-2 libxtst6_2:1.2.1-1 libxvidcore4_2:1.3.2-9 libxxf86dga-dev_2:1.1.2-1 libxxf86dga1_2:1.1.2-1 libxxf86vm-dev_1:1.1.1-2 libxxf86vm1_1:1.1.1-2 libzvbi-common_0.2.33-5 libzvbi-dev_0.2.33-5 libzvbi0_0.2.33-5 linux-libc-dev_3.2.14-1 llvm-3.0_3.0-9 llvm-3.0-runtime_3.0-9 login_1:4.1.5-1 lsb-base_4.1+Debian0 lua5.1_5.1.5-1 m4_1.4.16-2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mesa-common-dev_7.11.2-1 mime-support_3.52-1 mklibs_0.1.33 mklibs-copy_0.1.33 module-init-tools_6-2 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 netbase_4.47 nullmailer_1:1.05-1 ocaml-base-nox_3.12.1-2 ocaml-findlib_1.2.8+debian-1 ocaml-interp_3.12.1-2 ocaml-nox_3.12.1-2 octave-common_3.6.1-4 openjdk-6-jre-headless_6b24-1.11.1-5 openjdk-6-jre-lib_6b24-1.11.1-5 openssl_1.0.1-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 python_2.7.2-10 python-all_2.7.2-10 python-all-dev_2.7.2-10 python-cairo_1.8.8-1+b2 python-dev_2.7.2-10 python-gobject-2_2.28.6-10 python-gobject-2-dev_2.28.6-10 python-minimal_2.7.2-10 python-numpy_1:1.6.1-8 python-qt4-dev_4.9.1-1 python-sip_4.13.2-1 python-sip-dev_4.13.2-1 python-support_1.0.14 python2.6_2.6.7-4 python2.6-dev_2.6.7-4 python2.6-minimal_2.6.7-4 python2.7_2.7.3~rc2-2 python2.7-dev_2.7.3~rc2-2 python2.7-minimal_2.7.3~rc2-2 qdbus_4:4.7.4-3 qt4-linguist-tools_4:4.7.4-3 qt4-qmake_4:4.7.4-3 quilt_0.60-2 readline-common_6.2-8 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xml-core_0.13 xorg-sgml-doctools_1:1.10-1 xsltproc_1.1.26-8 xtrans-dev_1.2.6-2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.6_4.6.3-5 gcc-4.6_4.6.3-5 libc6-dev_2.13-32 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 linux-libc-dev_3.2.16-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.6.3-5 cpp-4.6_4.6.3-5 dash_0.5.7-3 debconf_1.5.43 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-5 g++-4.6_4.6.3-5 gcc_4:4.6.3-5 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-5 gcc-4.6-base_4.6.3-5 gcc-4.7-base_4.7.0-7 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.3 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-7 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1 libgomp1_4.7.0-7 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.16-1 login_1:4.1.5-1 lsb-base_4.1+Debian2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -274,14 +283,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -291,46 +301,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture armel
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -370,9 +380,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armel-WT2F5I/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armel-aTadcV/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -382,73 +392,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_armel.deb'.
- dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../tabix_0.2.5-2_armel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_armel.deb'.
+ dpkg-genchanges -B -marmel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org> >../tabix_0.2.5-3_armel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2122
+Build finished at 20120512-0915
-tabix_0.2.5-2_armel.changes:
+tabix_0.2.5-3_armel.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: armel
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: armel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org>
+Maintainer: armel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
- .
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- d991405695a4311487711023304d0ec1307bd632 56490 tabix_0.2.5-2_armel.deb
+ 942e93e1f35c98c272eaed266a7e7f9321712c23 56522 tabix_0.2.5-3_armel.deb
Checksums-Sha256:
- 9597faf8a03b46a08497d9a4e4c168312c2e02f02baecba80d9c22ef4663f063 56490 tabix_0.2.5-2_armel.deb
+ 4857c1c3dd2aabeab0180d54d83e14dbe870ac01ecf14536b8120ad035e2a8e7 56522 tabix_0.2.5-3_armel.deb
Files:
- 46439fa4b8a59837caf496befec6b49c 56490 science optional tabix_0.2.5-2_armel.deb
+ 5c68b2d0e3e908c77b54b55dd9c92f3e 56522 science optional tabix_0.2.5-3_armel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_armel.deb
+tabix_0.2.5-3_armel.deb
───────────────────────
new debian package, version 2.0.
- size 56490 bytes: control archive= 992 bytes.
+ size 56522 bytes: control archive= 996 bytes.
780 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 141
+ Installed-Size: 143
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -461,26 +460,26 @@ tabix_0.2.5-2_armel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/bin/
--rwxr-xr-x root/root 24904 2012-04-25 21:22 ./usr/bin/bgzip
--rwxr-xr-x root/root 62732 2012-04-25 21:22 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:22 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 09:15 ./
+drwxr-xr-x root/root 0 2012-05-12 09:14 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 09:15 ./usr/bin/
+-rwxr-xr-x root/root 26288 2012-05-12 09:15 ./usr/bin/bgzip
+-rwxr-xr-x root/root 63332 2012-05-12 09:15 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 09:14 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 09:14 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 09:15 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 09:14 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 09:14 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 09:15 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-05-12 09:14 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-lrwxrwxrwx root/root 0 2012-04-25 21:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+lrwxrwxrwx root/root 0 2012-05-12 09:15 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -494,81 +493,27 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armel-sbuild-b4e296d2-4ef9-4c15-83da-d062da4fd409/build/buildd-tabix_0.2.5-2-armel-WT2F5I
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- aspell-en libgtk2.0-common libatk1.0-0 libenchant1c2a libtorque2
- libcolamd2.7.1 libcxsparse2.2.3 liblcms1 libfftw3-dev libatk1.0-dev
- libgstreamer0.10-0 aspell libwrap0 libwxbase2.8-dev liblapack-dev
- libcamd2.2.0 libglpk0 libarpack2 iso-codes libblas-dev qdbus libpixman-1-0
- libpango1.0-dev libqt4-test libqt4-dbus libopenmpi1.3 libatk-wrapper-java
- libglu1-mesa libgl2ps0 libxi-dev java-common libqrupdate1 libnspr4-0d
- libfftw3-3 libcairo2-dev libcairo2 gir1.2-atk-1.0 libgdk-pixbuf2.0-common
- libdatrie1 x11proto-composite-dev fontconfig libqt4-xmlpatterns libgconf2-4
- libjson0 gir1.2-freedesktop libxcursor-dev libpango1.0-0 libparpack2
- libcups2 libhunspell-1.3-0 libglu1-mesa-dev libfltk1.1
- libcairo-script-interpreter2 libqtcore4 libgif4 x11proto-randr-dev
- x11proto-damage-dev openjdk-6-jre-headless liboctave1 gir1.2-glib-2.0
- dictionaries-common qt4-qmake libxcomposite1 tzdata-java libwxbase2.8-0
- libthai0 gir1.2-pango-1.0 openjdk-6-jre-lib libxdamage-dev
- libgirepository-1.0-1 libqt4-sql libatk1.0-data x11proto-fixes-dev adduser
- libcholmod1.7.1 libqt4-xml libasyncns0 libxcomposite-dev libjasper1
- libqt4-network libamd2.2.0 wx-common libibverbs1 libthai-data libxtst6
- libxrandr-dev libcairo-gobject2 libpixman-1-dev libpulse0 libumfpack5.4.0
- default-jre-headless libxfixes-dev libqt4-script ca-certificates-java libxi6
- qt4-linguist-tools libaudio2 libxcursor1 libgstreamer-plugins-base0.10-0
- wx2.8-headers libccolamd2.7.1 libxrandr2 libnss3-1d libsndfile1 libaspell15
- libmng1 python-cairo libenchant-dev octave-common
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 99 not upgraded.
+Purging /var/lib/schroot/mount/sid-armel-sbuild-68cce964-f47f-4ec1-988a-63d7307ec5ab/build/buildd-tabix_0.2.5-3-armel-aTadcV
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armel
-Build-Space: 1460
-Build-Time: 68
+Build-Space: 1472
+Build-Time: 84
Distribution: sid
-Install-Time: 20
-Job: tabix_0.2.5-2
+Install-Time: 97
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 129
-Source-Version: 0.2.5-2
-Space: 1460
+Package-Time: 366
+Source-Version: 0.2.5-3
+Space: 1472
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2122
-Build needed 00:02:09, 1460k disc space
-Signature with key 'DD902B75' requested:
+Finished at 20120512-0915
+Build needed 00:06:06, 1472k disc space
+Signature with key '364BAAB7' requested:
+
diff --git a/armhf.log b/armhf.log
index 4be41a4..7a53839 100644
--- a/armhf.log
+++ b/armhf.log
@@ -1,66 +1,67 @@
-From buildd at howells.debian.org Wed Apr 25 21:19:33 2012
-Return-path: <buildd at howells.debian.org>
+From buildd at hildegard.debian.org Sat May 12 07:32:50 2012
+Return-path: <buildd at hildegard.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at howells.debian.org>)
- id 1SN9cb-0003rG-LJ
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:33 +0000
-Received: from howells.ynic.york.ac.uk ([144.32.168.75]
- helo=howells.debian.org)
+ (Exim 4.72) (envelope-from <buildd at hildegard.debian.org>)
+ id 1ST6os-0002Kf-9b
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:50 +0000
+Received: from hildegard.ynic.york.ac.uk ([144.32.168.74]
+ helo=hildegard.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=howells.debian.org, EMAIL=hostmaster at howells.debian.org (verified)
+ CN=hildegard.debian.org,
+ EMAIL=hostmaster at hildegard.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at howells.debian.org>)
- id 1SN9ca-0006SL-Lo
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:32 +0000
-Received: from buildd by howells.debian.org with local (Exim 4.77)
- (envelope-from <buildd at howells.debian.org>)
- id 1SN9cZ-00055f-KI; Wed, 25 Apr 2012 21:19:31 +0000
-From: buildd on howells <buildd at howells.debian.org>
-To: logs at buildd.debian.org,buildd-porters at howells.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on armhf (dist=sid)
+ (Exim 4.72) (envelope-from <buildd at hildegard.debian.org>)
+ id 1ST6or-00050T-AG
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:49 +0000
+Received: from buildd by hildegard.debian.org with local (Exim 4.77)
+ (envelope-from <buildd at hildegard.debian.org>)
+ id 1ST6op-0003pS-RP; Sat, 12 May 2012 07:32:48 +0000
+From: buildd on hildegard <buildd at hildegard.debian.org>
+To: logs at buildd.debian.org,buildd-porters at hildegard.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on armhf (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1SN9cZ-00055f-KI at howells.debian.org>
-Date: Wed, 25 Apr 2012 21:19:31 +0000
+Message-Id: <E1ST6op-0003pS-RP at hildegard.debian.org>
+Date: Sat, 12 May 2012 07:32:47 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on howells.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on hildegard.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (armhf) 25 Apr 2012 21:14 ║
+║ tabix 0.2.5-3 (armhf) 12 May 2012 07:27 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: armhf
-Get:1 http://ftp.uk.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.uk.debian.org unstable/main Sources [6244 kB]
+Get:1 http://ftp.uk.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:6 http://ftp.uk.debian.org unstable/contrib Sources [53.9 kB]
-Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
-Get:8 http://ftp.uk.debian.org unstable/main armhf Packages [5724 kB]
-Get:9 http://ftp.uk.debian.org unstable/contrib armhf Packages [35.5 kB]
-Get:10 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:11 http://ftp.uk.debian.org unstable/main Translation-en [3943 kB]
-Get:12 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:13 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:14 http://incoming.debian.org unstable/main armhf Packages [5725 kB]
-Get:15 http://incoming.debian.org unstable/contrib armhf Packages [35.5 kB]
-Get:16 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:17 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org Sources [33.5 kB]
-Get:20 http://incoming.debian.org Packages [517 kB]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:7 http://ftp.uk.debian.org unstable/contrib Sources [54.7 kB]
+Get:8 http://ftp.uk.debian.org unstable/non-free Sources [96.6 kB]
+Get:9 http://ftp.uk.debian.org unstable/main armhf Packages [5778 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:12 http://incoming.debian.org unstable/main armhf Packages [5778 kB]
+Get:13 http://ftp.uk.debian.org unstable/contrib armhf Packages [36.0 kB]
+Get:14 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:15 http://ftp.uk.debian.org unstable/main Translation-en [3953 kB]
+Get:16 http://incoming.debian.org unstable/contrib armhf Packages [36.0 kB]
+Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:19 http://incoming.debian.org Sources [43.6 kB]
+Get:20 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.2 MB in 1min 51s (299 kB/s)
+Fetched 33.8 MB in 1min 51s (303 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -81,11 +82,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (98.8 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (101 kB/s)
Download complete and in download only mode
Check arch
@@ -99,18 +100,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5+b1)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -119,13 +120,13 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-libc6-dev: already installed (2.13-28)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+libc6-dev: already installed (2.13-32)
+gcc: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -134,8 +135,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -144,49 +145,56 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 10 not upgraded.
-Need to get 9329 kB of archives.
-After this operation, 22.8 MB of additional disk space will be used.
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+0 upgraded, 21 newly installed, 0 to remove and 19 not upgraded.
+Need to get 9402 kB of archives.
+After this operation, 23.0 MB of additional disk space will be used.
Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.1-1 [33.2 kB]
-Get:2 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 5.11-1 [247 kB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 1:8.30-4 [241 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.7.8.dfsg-9 [779 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armhf 3.0.10-3+b1 [22.3 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.32.0-4 [1872 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.5-1 [134 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.1 [203 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.21-7 [1027 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.1-2 [1012 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main file armhf 5.11-1 [52.8 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-5+b1 [132 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-5+b1 [1920 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.6.dfsg-2 [206 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armhf 0.18.1.1-7 [26.0 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 5.11-1 [247 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 1:8.30-5 [240 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.7.8.dfsg-9 [779 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armhf 3.0.10-3+b1 [22.3 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.32.2-1 [1895 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.5-1 [134 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo0 armhf 0.18.1.1-7 [121 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.1 [203 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.21-7 [1027 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.1-2 [1012 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main file armhf 5.11-1 [52.8 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-7 [131 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-7 [1826 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.7.dfsg-1 [206 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9329 kB in 4s (2062 kB/s)
+Fetched 9402 kB in 2s (3235 kB/s)
Selecting previously unselected package libpipeline1:armhf.
-(Reading database ... 10778 files and directories currently installed.)
+(Reading database ... 10770 files and directories currently installed.)
Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ...
+Selecting previously unselected package libasprintf0c2:armhf.
+Unpacking libasprintf0c2:armhf (from .../libasprintf0c2_0.18.1.1-7_armhf.deb) ...
Selecting previously unselected package libmagic1:armhf.
Unpacking libmagic1:armhf (from .../libmagic1_5.11-1_armhf.deb) ...
Selecting previously unselected package libpcre3:armhf.
-Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-4_armhf.deb) ...
+Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ...
Selecting previously unselected package libxml2:armhf.
Unpacking libxml2:armhf (from .../libxml2_2.7.8.dfsg-9_armhf.deb) ...
Selecting previously unselected package libffi5:armhf.
Unpacking libffi5:armhf (from .../libffi5_3.0.10-3+b1_armhf.deb) ...
Selecting previously unselected package libglib2.0-0:armhf.
-Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.32.0-4_armhf.deb) ...
+Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.32.2-1_armhf.deb) ...
Selecting previously unselected package libcroco3:armhf.
Unpacking libcroco3:armhf (from .../libcroco3_0.6.5-1_armhf.deb) ...
Selecting previously unselected package libunistring0:armhf.
Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
+Selecting previously unselected package libgettextpo0:armhf.
+Unpacking libgettextpo0:armhf (from .../libgettextpo0_0.18.1.1-7_armhf.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_armhf.deb) ...
Selecting previously unselected package groff-base.
@@ -196,28 +204,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_armhf.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_armhf.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_armhf.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_armhf.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_armhf.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5+b1_armhf.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_armhf.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:armhf.
-Unpacking zlib1g-dev:armhf (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_armhf.deb) ...
+Unpacking zlib1g-dev:armhf (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_armhf.deb) ...
Setting up libpipeline1:armhf (1.2.1-1) ...
+Setting up libasprintf0c2:armhf (0.18.1.1-7) ...
Setting up libmagic1:armhf (5.11-1) ...
-Setting up libpcre3:armhf (1:8.30-4) ...
+Setting up libpcre3:armhf (1:8.30-5) ...
Setting up libxml2:armhf (2.7.8.dfsg-9) ...
Setting up libffi5:armhf (3.0.10-3+b1) ...
-Setting up libglib2.0-0:armhf (2.32.0-4) ...
+Setting up libglib2.0-0:armhf (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.5-1) ...
Setting up libunistring0:armhf (0.9.3-5+b1) ...
+Setting up libgettextpo0:armhf (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -225,22 +235,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15+b1) ...
-Setting up gettext (0.18.1.1-5+b1) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:armhf (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:armhf (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 3.2.0-2-mx5 armhf (armv7l)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6-dev_2.13-28 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.15-1
-Package versions: apt_0.9.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-28 libc-dev-bin_2.13-28 libc6_2.13-28 libc6-dev_2.13-28 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblocale-gettext-perl_1.05-7+b3 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-28 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.6_4.6.3-5 gcc-4.6_4.6.3-5 libc6-dev_2.13-32 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 linux-libc-dev_3.2.16-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.6.3-5 cpp-4.6_4.6.3-5 dash_0.5.7-3 debconf_1.5.43 debconf-i18n_1.5.43 debfoster_2.7-1.1+b1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-5 g++-4.6_4.6.3-5 gcc_4:4.6.3-5 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-5 gcc-4.6-base_4.6.3-5 gcc-4.7-base_4.7.0-7 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.3 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-7 libgdbm3_1.8.3-10+b1 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1 libgomp1_4.7.0-7 liblocale-gettext-perl_1.05-7+b3 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.16-1 login_1:4.1.5-1 lsb-base_4.1+Debian2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -251,14 +261,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -268,46 +279,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -347,9 +358,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-armhf-XRKX_h/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-armhf-GF6jqg/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -359,73 +370,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_armhf.deb'.
- dpkg-genchanges -B -marmhf Build Daemon (howells) <buildd_armhf-howells at buildd.debian.org> >../tabix_0.2.5-2_armhf.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_armhf.deb'.
+ dpkg-genchanges -B -marmhf Build Daemon (hildegard) <buildd_armhf-hildegard at buildd.debian.org> >../tabix_0.2.5-3_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2119
+Build finished at 20120512-0732
-tabix_0.2.5-2_armhf.changes:
+tabix_0.2.5-3_armhf.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: armhf
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: armhf Build Daemon (howells) <buildd_armhf-howells at buildd.debian.org>
+Maintainer: armhf Build Daemon (hildegard) <buildd_armhf-hildegard at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- f11277240109b77086b018a6df933810a1b13bf2 54002 tabix_0.2.5-2_armhf.deb
+ 18b46efca3353519cdeb97ffb8501f3052e3b115 54354 tabix_0.2.5-3_armhf.deb
Checksums-Sha256:
- 9d2d462ef3198be4cfc4af742b0756f874ede03e144278ea0c8345a22ff73403 54002 tabix_0.2.5-2_armhf.deb
+ 43a4c3dbe79233eaf86ae1e92e1d38358d2db793dc1d0bbd63f63fd0c29aac36 54354 tabix_0.2.5-3_armhf.deb
Files:
- 941af7bd9ed657eb0cacaed6bf40ae49 54002 science optional tabix_0.2.5-2_armhf.deb
+ bdf59c3131cab96f9a8ee8c466e3f437 54354 science optional tabix_0.2.5-3_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_armhf.deb
+tabix_0.2.5-3_armhf.deb
───────────────────────
new debian package, version 2.0.
- size 54002 bytes: control archive= 997 bytes.
+ size 54354 bytes: control archive=995 bytes.
784 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 118
+ Installed-Size: 123
Depends: libc6 (>= 2.13-28), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -438,26 +438,26 @@ tabix_0.2.5-2_armhf.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/bin/
--rwxr-xr-x root/root 46092 2012-04-25 21:19 ./usr/bin/tabix
--rwxr-xr-x root/root 18688 2012-04-25 21:19 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:19 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:32 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-lrwxrwxrwx root/root 0 2012-04-25 21:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/bin/
+-rwxr-xr-x root/root 46956 2012-05-12 07:32 ./usr/bin/tabix
+-rwxr-xr-x root/root 22200 2012-05-12 07:32 ./usr/bin/bgzip
+lrwxrwxrwx root/root 0 2012-05-12 07:32 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -471,7 +471,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armhf-sbuild-ea67993f-f14f-49dc-98c2-d3f01095484c/build/buildd-tabix_0.2.5-2-armhf-XRKX_h
+Purging /var/lib/schroot/mount/sid-armhf-sbuild-b8704d60-33a1-4f6e-8741-d066edc8b969/build/buildd-tabix_0.2.5-3-armhf-GF6jqg
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -479,19 +479,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armhf
-Build-Space: 1396
-Build-Time: 70
+Build-Space: 1416
+Build-Time: 73
Distribution: sid
-Install-Time: 86
-Job: tabix_0.2.5-2
+Install-Time: 90
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 302
-Source-Version: 0.2.5-2
-Space: 1396
+Package-Time: 309
+Source-Version: 0.2.5-3
+Space: 1416
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2119
-Build needed 00:05:02, 1396k disc space
-Signature with key 'DB148B42' requested:
+Finished at 20120512-0732
+Build needed 00:05:09, 1416k disc space
+Signature with key '0E1957C5' requested:
diff --git a/hurd-i386.log b/hurd-i386.log
index 8f7deda..667e7af 100644
--- a/hurd-i386.log
+++ b/hurd-i386.log
@@ -1,63 +1,61 @@
-From buildd at mozart.debian.net Wed Apr 25 21:23:36 2012
-Return-path: <buildd at mozart.debian.net>
+From buildd at bach.debian.net Sat May 12 07:37:49 2012
+Return-path: <buildd at bach.debian.net>
Received: from callisto.debian.net ([80.87.129.151])
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mozart.debian.net>)
- id 1SN9gU-0004Qy-Kv
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:23:35 +0000
-Received: from mozart.debian.net ([10.1.0.1])
+ (Exim 4.72) (envelope-from <buildd at bach.debian.net>)
+ id 1ST6th-000348-71
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:37:49 +0000
+Received: from bach.debian.net ([10.3.0.1])
by callisto.debian.net with esmtp (Exim 4.72)
- (envelope-from <buildd at mozart.debian.net>)
- id 1SN9gQ-0001sd-JQ; Wed, 25 Apr 2012 22:23:30 +0100
-Received: from buildd by mozart.debian.net with local (Exim 4.76)
- (envelope-from <buildd at mozart.debian.net>)
- id 1SN9gR-0006Qf-TL; Wed, 25 Apr 2012 21:23:31 +0000
-From: Build Daemon <buildd at mozart.debian.net>
-To: samuel.thibault at ens-lyon.org, mbanck at gmx.net, logs at buildd.debian-ports.org,
- logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on hurd-i386 (dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
-Message-Id: <E1SN9gR-0006Qf-TL at mozart.debian.net>
-Date: Wed, 25 Apr 2012 21:23:31 +0000
+ (envelope-from <buildd at bach.debian.net>)
+ id 1ST6tf-0006nL-ES; Sat, 12 May 2012 08:37:47 +0100
+Received: from buildd by bach.debian.net with local (Exim 4.72)
+ (envelope-from <buildd at bach.debian.net>)
+ id 1ST6tn-0000am-Tj; Sat, 12 May 2012 07:37:55 +0000
+Message-Id: <E1ST6tn-0000am-Tj at bach.debian.net>
+MIME-Version: 1.0
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.78; A2.07; B3.08; Q3.08)
+Date: Sat, 12 May 2012 07:37:55 +0000
+From: Build Daemon <buildd at bach.debian.net>
+To: samuel.thibault at ens-lyon.org,mbanck at gmx.net,logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on hurd-i386 (dist=sid)
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mozart.debian.net
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on bach.debian.net
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (hurd-i386) 25 avril 2012 21:18 ║
+║ tabix 0.2.5-3 (hurd-i386) 12 mai 2012 07:29 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: hurd-i386
Ign file: ./ InRelease
Ign file: ./ Release.gpg
Ign file: ./ Release
Ign file: ./ Translation-en
+Ign file: ./ Translation-fr
Hit http://ftp.fr.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Ign http://ftp.debian-ports.org unreleased InRelease
Hit http://incoming.debian.org Release.gpg
Hit http://ftp.fr.debian.org sid/main Sources/DiffIndex
-Hit http://ftp.debian-ports.org unreleased Release.gpg
Hit http://incoming.debian.org Release
Hit http://ftp.fr.debian.org sid/contrib Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/non-free Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/main hurd-i386 Packages/DiffIndex
-Hit http://ftp.debian-ports.org unreleased Release
Hit http://ftp.fr.debian.org sid/contrib hurd-i386 Packages/DiffIndex
Ign http://ftp.fr.debian.org sid/contrib TranslationIndex
Hit http://ftp.fr.debian.org sid/main TranslationIndex
Hit http://ftp.fr.debian.org sid/contrib Translation-en
Hit http://ftp.fr.debian.org sid/main Translation-en
+Hit http://ftp.fr.debian.org sid/main Translation-fr
Hit http://incoming.debian.org Sources
Hit http://incoming.debian.org Packages
-Hit http://ftp.debian-ports.org unreleased/main hurd-i386 Packages
-Ign http://ftp.debian-ports.org unreleased/main TranslationIndex
+Ign http://ftp.fr.debian.org sid/contrib Translation-fr
Ign http://incoming.debian.org Translation-en
-Ign http://ftp.debian-ports.org unreleased/main Translation-en
+Ign http://incoming.debian.org Translation-fr
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -78,11 +76,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (88.5 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (91.5 kB/s)
Download complete and in download only mode
Check arch
@@ -95,27 +93,68 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-build-essential: already installed (11.5)
+build-essential: missing
fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
-Installing positive dependencies:
+Installing positive dependencies: build-essential
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+The following extra packages will be installed:
+ cpp cpp-4.7 g++ g++-4.7 gcc gcc-4.7 libstdc++6-4.7-dev
+Suggested packages:
+ cpp-doc gcc-4.7-locales gcc-4.7-doc libstdc++6-4.7-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ libmudflap0-4.7-dev libgcc1-dbg libgomp1-dbg libitm1-dbg libquadmath0-dbg
+ libmudflap0-dbg libstdc++6-4.7-doc
+The following NEW packages will be installed:
+ build-essential cpp cpp-4.7 g++ g++-4.7 gcc gcc-4.7 libstdc++6-4.7-dev
+0 upgraded, 8 newly installed, 0 to remove and 88 not upgraded.
+Need to get 0 B/17.9 MB of archives.
+After this operation, 49.0 MB of additional disk space will be used.
+WARNING: The following packages cannot be authenticated!
+ cpp-4.7 cpp gcc-4.7 gcc libstdc++6-4.7-dev g++-4.7 g++ build-essential
+Authentication warning overridden.
+Selecting previously unselected package cpp-4.7.
+(Reading database ... 16715 files and directories currently installed.)
+Unpacking cpp-4.7 (from .../cpp-4.7_4.7.0-8_hurd-i386.deb) ...
+Selecting previously unselected package cpp.
+Unpacking cpp (from .../cpp_4%3a4.7.0-6_hurd-i386.deb) ...
+Selecting previously unselected package gcc-4.7.
+Unpacking gcc-4.7 (from .../gcc-4.7_4.7.0-8_hurd-i386.deb) ...
+Selecting previously unselected package gcc.
+Unpacking gcc (from .../gcc_4%3a4.7.0-6_hurd-i386.deb) ...
+Selecting previously unselected package libstdc++6-4.7-dev.
+Unpacking libstdc++6-4.7-dev (from .../libstdc++6-4.7-dev_4.7.0-8_hurd-i386.deb) ...
+Selecting previously unselected package g++-4.7.
+Unpacking g++-4.7 (from .../g++-4.7_4.7.0-8_hurd-i386.deb) ...
+Selecting previously unselected package g++.
+Unpacking g++ (from .../g++_4%3a4.7.0-6_hurd-i386.deb) ...
+Selecting previously unselected package build-essential.
+Unpacking build-essential (from .../build-essential_11.5+b1_hurd-i386.deb) ...
+Processing triggers for man-db ...
+Setting up cpp-4.7 (4.7.0-8) ...
+Setting up cpp (4:4.7.0-6) ...
+Setting up gcc-4.7 (4.7.0-8) ...
+Setting up gcc (4:4.7.0-6) ...
+Setting up libstdc++6-4.7-dev (4.7.0-8) ...
+Setting up g++-4.7 (4.7.0-8) ...
+Setting up g++ (4:4.7.0-6) ...
+update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode.
+Setting up build-essential (11.5+b1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 88 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -124,60 +163,119 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, hurd, ncurses-base, ncurses-bin, perl-base, sed, sysvinit-utils, sysvinit, tar, bsdutils, util-linux, libc0.3-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), hurd-dev, debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.5)
-base-passwd: already installed (3.5.23)
+base-files: already installed (6.4)
+base-passwd: already installed (3.5.22)
bash: already installed (4.2-2)
-coreutils: already installed (8.13-3)
-dash: already installed (0.5.7-2)
-debianutils: already installed (4.0.4)
-diffutils: already installed (1:3.2-1)
-dpkg: already installed (1.16.1.1)
-e2fsprogs: already installed (1.42.1-2)
+coreutils: already installed (8.5-1)
+dash: already installed (0.5.5.1-7.4)
+debianutils: already installed (4.0.2)
+diffutils: already installed (1:3.0-1)
+dpkg: already installed (1.16.1.2)
+e2fsprogs: already installed (1.42.2-1)
findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.9-2)
+grep: already installed (2.9-1)
gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
-hurd: already installed (20111206-1)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-6)
+hurd: already installed (20120408-3)
+ncurses-base: already installed (5.9-1)
+ncurses-bin: already installed (5.9-7)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-sysvinit-utils: already installed (2.88dsf-13.13)
-sysvinit: already installed (2.88dsf-13.13)
-tar: already installed (1.26-2)
-bsdutils: already installed (1:2.19.1-5)
-util-linux: already installed (2.19.1-5)
-libc0.3-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
+sysvinit-utils: already installed (2.88dsf-13.10)
+sysvinit: already installed (2.88dsf-13.10)
+tar: already installed (1.25-2)
+bsdutils: already installed (1:2.16.2-0)
+util-linux: already installed (2.16.2-0)
+libc0.3-dev: already installed (2.13-31)
+gcc: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.1 >= 1.13.5 is satisfied)
-hurd-dev: already installed (20111206-1)
-debhelper: already installed (9.20120419 >= 9 is satisfied)
-zlib1g-dev: already installed (1:1.2.6.dfsg-1)
+dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+hurd-dev: already installed (20120408-3)
+debhelper: missing
+Using default version 9.20120509
+zlib1g-dev: already installed (1:1.2.6.dfsg-2)
Checking for dependency conflicts...
-Installing positive dependencies:
+Installing positive dependencies: debhelper
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+The following extra packages will be installed:
+ file gettext gettext-base html2text intltool-debian libasprintf0c2 libcroco3
+ libexpat1 libgettextpo0 libmagic1 libunistring0 po-debconf
+Suggested packages:
+ dh-make gettext-doc libmail-box-perl
+Recommended packages:
+ curl wget lynx-cur autopoint libmail-sendmail-perl
+The following NEW packages will be installed:
+ debhelper file gettext gettext-base html2text intltool-debian libasprintf0c2
+ libcroco3 libexpat1 libgettextpo0 libmagic1 libunistring0 po-debconf
+0 upgraded, 13 newly installed, 0 to remove and 88 not upgraded.
+Need to get 0 B/4267 kB of archives.
+After this operation, 13.9 MB of additional disk space will be used.
+WARNING: The following packages cannot be authenticated!
+ libasprintf0c2 libmagic1 libcroco3 libexpat1 libunistring0 libgettextpo0
+ file gettext-base html2text gettext intltool-debian po-debconf debhelper
+Authentication warning overridden.
+Selecting previously unselected package libasprintf0c2.
+(Reading database ... 17559 files and directories currently installed.)
+Unpacking libasprintf0c2 (from .../libasprintf0c2_0.18.1.1-7_hurd-i386.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.11-1+b1_hurd-i386.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_hurd-i386.deb) ...
+Selecting previously unselected package libexpat1.
+Unpacking libexpat1 (from .../libexpat1_2.1.0-1+b1_hurd-i386.deb) ...
+Selecting previously unselected package libunistring0.
+Unpacking libunistring0 (from .../libunistring0_0.9.3-5_hurd-i386.deb) ...
+Selecting previously unselected package libgettextpo0.
+Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-7_hurd-i386.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_5.11-1+b1_hurd-i386.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_hurd-i386.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15+b2_hurd-i386.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-7_hurd-i386.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
+Processing triggers for man-db ...
+Processing triggers for install-info ...
+Setting up libasprintf0c2 (0.18.1.1-7) ...
+Setting up libmagic1 (5.11-1+b1) ...
+Setting up libcroco3 (0.6.5-1) ...
+Setting up libexpat1 (2.1.0-1+b1) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up libgettextpo0 (0.18.1.1-7) ...
+Setting up file (5.11-1+b1) ...
+Setting up gettext-base (0.18.1.1-7) ...
+Setting up html2text (1.3.2a-15+b2) ...
+Setting up gettext (0.18.1.1-7) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120509) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 88 not upgraded.
Checking correctness of dependencies...
Kernel: GNU 0.3 hurd-i386 (i686-AT386)
-Toolchain package versions: binutils_2.22-5+hurd.1 dpkg-dev_1.16.1.1 g++-4.6_4.6.3-1+hurd.2 gcc-4.6_4.6.3-1+hurd.2 gnumach-dev_2:1.3.99.dfsg.git20111010-1 hurd-dev_20111206-1 libc0.3-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1+hurd.2
-Package versions: adduser_3.113 apt_0.8.15.9 apt-utils_0.8.15.9 autotools-dev_20120210.1 base-files_6.5 base-passwd_3.5.23 bash_4.2-2 binutils_2.22-5+hurd.1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1+hurd.2 cron_3.0pl1-120 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2012.01.08 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-1+b1 g++_4:4.6.1-3 g++-4.6_4.6.3-1+hurd.2 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-9 gcc-4.6_4.6.3-1+hurd.2 gcc-4.6-base_4.6.3-1+hurd.2 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnumach-dev_2:1.3.99.dfsg.git20111010-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-7 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15+b1 hurd_20111206-1 hurd-dev_20111206-1 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg-dev_0.8.15.9 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libboost-iostreams1.46.1_1.46.1-8 libboost-iostreams1.48.0_1.48.0-3 libboost-iostreams1.49.0_1.49.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.3_2.13-27 libc0.3-dev_2.13-27 libc0.3-xen_2.13-27 libclass-isa-perl_0.36-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcwidget3_0.5.16-3.1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.1 libept-dev_1.0.5 libept1_1.0.5 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3 libfreexl-dev_1.0.0b-1 libfreexl1_1.0.0b-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgeos-3.3.1_3.3.1-1 libgeos-c1_3.3.1-1 libgeos-dev_3.3.1-1 libglib2.0-0_2.32.0-4 libglib2.0-data_2.28.8-1 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.18-1 libgomp1_4.7.0-3 libgpg-error0_1.10-3 libldap-2.4-2_2.4.28-1.1 liblocale-gettext-perl_1.05-7+b1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libp11-kit0_0.12-3 libpam-modules_1.1.3-5 libpam-modules-bin_1.1.3-5 libpam-runtime_1.1.3-5 libpam0g_1.1.3-7 libparted0debian1_2.3-3+hurd.1 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libpopt0_1.16-3 libproj-dev_4.7.0-1 libproj0_4.7.0-1 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsasl2-2_2.1.25.dfsg1-4 libsasl2-modules_2.1.25.dfsg1-4 libsigc++-2.0-0c2a_2.2.10-0.1 libsigsegv2_2.9-4 libslang2_2.2.4-8 libsqlite3-0_3.7.11-2 libsqlite3-dev_3.7.11-2 libss2_1.42.1-2 libssl0.9.8_0.9.8o-7+b1 libssl1.0.0_1.0.1a-3 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1+hurd.2 libswitch-perl_2.16-2 libsysfs2_2.1.0+repack-1 libtagcoll2-dev_2.0.13-1 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4+b1 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libuuid1_2.20.1-4 libwibble-dev_0.1.26-1 libxapian-dev_1.2.7-1 libxapian22_1.2.7-1 libxml2_2.7.8.dfsg-9 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-16 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.2.8-11 proj-data_4.7.0-1 psmisc_22.16-1+hurd.1 readline-common_6.2-7 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 shared-mime-info_0.90-1 sudo_1.7.2p7-1 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-2 tzdata_2011n-1 util-linux_2.19.1-5 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-1 zlib1g-dev_1:1.2.6.dfsg-1
+Toolchain package versions: binutils_2.22-6+b1 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-5 g++-4.7_4.7.0-8 gcc-4.4_4.4.7-1 gcc-4.5_4.5.3-12 gcc-4.6_4.6.3-5 gcc-4.7_4.7.0-8 gnumach-dev_2:1.3.99.dfsg.git20110609-1 hurd-dev_20120408-3 libc0.3-dev_2.13-31 libstdc++6_4.7.0-8 libstdc++6-4.6-dev_4.6.3-5 libstdc++6-4.7-dev_4.7.0-8
+Package versions: adduser_3.113 apt_0.8.15.10 apt-utils_0.9.0 base-files_6.4 base-passwd_3.5.22 bash_4.2-2 binutils_2.22-6+b1 bsd-mailx_8.1.2-0.20100314cvs-1 bsdmainutils_8.2.3 bsdutils_1:2.16.2-0 build-essential_11.5+b1 bzip2_1.0.6-1+b1 coreutils_8.5-1 cpio_2.11-7 cpp_4:4.7.0-6 cpp-4.4_4.4.7-1 cpp-4.5_4.5.3-12 cpp-4.6_4.6.3-5 cpp-4.7_4.7.0-8 cron_3.0pl1-118 dash_0.5.5.1-7.4 debconf_1.5.40 debfoster_2.6-2 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2012.01.08 debianutils_4.0.2 diffutils_1:3.0-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 exim4-base_4.76-2+b3 exim4-config_4.76-2 exim4-daemon-light_4.76-2+b3 fakeroot_1.18.2-1 file_5.11-1+b1 findutils_4.4.2-1+b1 g++_4:4.7.0-6 g++-4.6_4.6.3-5 g++-4.7_4.7.0-8 gawk_1:3.1.7.dfsg-5 gcc_4:4.7.0-6 gcc-4.2-base_4.2.4-6+b1 gcc-4.4_4.4.7-1 gcc-4.4-base_4.4.7-1 gcc-4.5_4.5.3-12 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-5 gcc-4.6-base_4.6.3-5 gcc-4.7_4.7.0-8 gcc-4.7-base_4.7.0-8 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnumach-dev_2:1.3.99.dfsg.git20110609-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-1 groff-base_1.21-7 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15+b2 hurd_20120408-3 hurd-dev_20120408-3 initscripts_2.88dsf-13.10 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-6 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-inst1.5_0.9.0 libapt-pkg-dev_0.9.0 libapt-pkg4.12_0.9.0 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-7 libblkid1_2.20.1-4 libboost-iostreams1.46.1_1.46.1-8 libboost-iostreams1.48.0_1.48.0-3 libboost-iostreams1.49.0_1.49.0-3 libbz2-1.0_1.0.6-1+b1 libc-bin_2.13-31 libc-dev-bin_2.13-31 libc0.3_2.13-31 libc0.3-dev_2.13-31 libc0.3-xen_2.13-31 libclass-isa-perl_0.36-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcwidget3_0.5.16-3.2 libdb5.1_5.1.29-2 libdpkg-perl_1.16.1.2 libelfg0_0.8.13-3 libept-dev_1.0.6+b1 libept1.4.12_1.0.6+b1 libexpat1_2.1.0-1+b1 libffi5_3.0.10-3 libgcc1_1:4.7.0-8 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10+b1 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libglib2.0-data_2.28.6-1 libgmp10_2:5.0.5+dfsg-1.1 libgnutls26_2.12.19-1 libgomp1_4.7.0-8 libgpg-error0_1.10-3 libldap-2.4-2_2.4.28-1.3 liblocale-gettext-perl_1.05-7+b1 liblockfile-bin_1.09-3 liblockfile1_1.09-3 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1+b1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libncursesw5_5.9-7 libp11-kit0_0.12-3 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-7.1 libparted0debian1_2.3-9.1 libpcre3_1:8.30-5 libpipeline1_1.2.0-5 libpng12-0_1.2.49-1 libpopt0_1.16-4 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libquadmath0_4.7.0-8 libreadline6_6.2-8 libsasl2-2_2.1.25.dfsg1-4+b1 libsasl2-modules_2.1.25.dfsg1-4+b1 libsigc++-2.0-0c2a_2.2.10-0.1 libslang2_2.2.4-9 libss2_1.42-1 libssl0.9.8_0.9.8o-7+b1 libssl1.0.0_1.0.1b-1 libstdc++6_4.7.0-8 libstdc++6-4.6-dev_4.6.3-5 libstdc++6-4.7-dev_4.7.0-8 libswitch-perl_2.16-2 libsysfs2_2.1.0+repack-1 libtagcoll2-dev_2.0.13-1 libtasn1-3_2.12-1 libtext-iconv-perl_1.7-5 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5 libuuid1_2.20.1-4 libwibble-dev_0.1.26-1 libxapian-dev_1.2.8-1 libxapian22_1.2.8-1 libxml2_2.7.8.dfsg-9 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 multiarch-support_2.13-10 ncurses-base_5.9-1 ncurses-bin_5.9-7 netbase_4.46 netcat-traditional_1.10-39 original-awk_2011-05-06-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 procps_1:3.2.8-10 readline-common_6.2-2 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 shared-mime-info_0.90-1 sudo_1.7.2p7-1 sysv-rc_2.88dsf-13.10 sysvinit_2.88dsf-13.10 sysvinit-utils_2.88dsf-13.10 tar_1.25-2 tzdata_2011h-3 util-linux_2.16.2-0 xml-core_0.13 xz-utils_5.0.0-2 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -188,14 +286,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -205,46 +304,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture hurd-i386
/usr/bin/fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
dh_clean
debian/rules build
dh build
dh_testdir
dh_auto_configure
dh_auto_build
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
dh_auto_test
/usr/bin/fakeroot debian/rules binary-arch
dh binary-arch
@@ -284,9 +383,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -296,73 +395,62 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_hurd-i386.deb'.
- dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org> >../tabix_0.2.5-2_hurd-i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_hurd-i386.deb'.
+ dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org> >../tabix_0.2.5-3_hurd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2123
+Build finished at 20120512-0737
-tabix_0.2.5-2_hurd-i386.changes:
+tabix_0.2.5-3_hurd-i386.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: hurd-i386
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org>
+Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 382a3d74c51e092bd307d8e05b8df8df5ba377de 62942 tabix_0.2.5-2_hurd-i386.deb
+ 31b0d55c11d09f80640d2627fc9810fd523de451 61666 tabix_0.2.5-3_hurd-i386.deb
Checksums-Sha256:
- 4e3ebe57c61da2d0d1699b2c5cd881b5a3566bb688668b88c85e5a2e382bcdb6 62942 tabix_0.2.5-2_hurd-i386.deb
+ ee9d0295fde10ef9a6c3c9c79dd1c3fe274e80ebc24400de74e5fc19e25bb79c 61666 tabix_0.2.5-3_hurd-i386.deb
Files:
- b5fb5c7e28d2beea5cf1e98167bfb5ba 62942 science optional tabix_0.2.5-2_hurd-i386.deb
+ 649961b52dbb90db5b97843c181f8117 61666 science optional tabix_0.2.5-3_hurd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_hurd-i386.deb
+tabix_0.2.5-3_hurd-i386.deb
───────────────────────────
new debian package, version 2.0.
- size 62942 bytes: control archive= 1000 bytes.
+ size 61666 bytes: control archive= 998 bytes.
786 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: hurd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 151
+ Installed-Size: 154
Depends: libc0.3 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -375,26 +463,26 @@ tabix_0.2.5-2_hurd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/bin/
--rwxr-xr-x root/root 72016 2012-04-25 21:22 ./usr/bin/tabix
--rwxr-xr-x root/root 26464 2012-04-25 21:22 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/bin/
+-rwxr-xr-x root/root 71408 2012-05-12 07:36 ./usr/bin/tabix
+-rwxr-xr-x root/root 30288 2012-05-12 07:36 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:22 ./usr/share/man/man1/tabix.1.gz
-lrwxr-xr-x root/root 0 2012-04-25 21:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:36 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-05-12 07:36 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -408,41 +496,75 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-2-hurd-i386-_7RfLw
+Purging /home/buildd/build/chroot-sid/build/buildd-tabix_0.2.5-3-hurd-i386-8OtprR
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 88 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2
+ libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.48.0
+ libboost-iostreams1.49.0
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 85 not upgraded.
+The following packages will be REMOVED:
+ build-essential* cpp* cpp-4.7* debhelper* file* g++* g++-4.7* gcc* gcc-4.7*
+ gettext* gettext-base* html2text* intltool-debian* libasprintf0c2*
+ libcroco3* libexpat1* libgettextpo0* libmagic1* libstdc++6-4.7-dev*
+ libunistring0* po-debconf*
+0 upgraded, 0 newly installed, 21 to remove and 88 not upgraded.
+After this operation, 62.8 MB disk space will be freed.
+(Reading database ... 18383 files and directories currently installed.)
+Removing build-essential ...
+Removing g++ ...
+Removing gcc ...
+Removing cpp ...
+Removing debhelper ...
+Removing file ...
+Removing po-debconf ...
+Removing intltool-debian ...
+Removing gettext ...
+Removing gettext-base ...
+Removing html2text ...
+Purging configuration files for html2text ...
+Removing libasprintf0c2 ...
+Removing libcroco3 ...
+Purging configuration files for libcroco3 ...
+Removing libexpat1 ...
+Purging configuration files for libexpat1 ...
+Removing libgettextpo0 ...
+Removing libmagic1 ...
+Purging configuration files for libmagic1 ...
+Removing libunistring0 ...
+Purging configuration files for libunistring0 ...
+Removing g++-4.7 ...
+Removing libstdc++6-4.7-dev ...
+Removing gcc-4.7 ...
+Removing cpp-4.7 ...
+Processing triggers for man-db ...
+Processing triggers for install-info ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: hurd-i386
-Build-Space: 1532
-Build-Time: 72
+Build-Space: 1684
+Build-Time: 120
Distribution: sid
-Install-Time: 23
-Job: tabix_0.2.5-2
+Install-Time: 209
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 266
-Source-Version: 0.2.5-2
-Space: 1532
+Package-Time: 431
+Source-Version: 0.2.5-3
+Space: 1684
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2123
-Build needed 00:04:26, 1532k disc space
-
+Finished at 20120512-0737
+Build needed 00:07:11, 1684k disc space
diff --git a/i386.log b/i386.log
index 763105c..65ee555 100644
--- a/i386.log
+++ b/i386.log
@@ -1,66 +1,65 @@
-From buildd at biber.debian.org Wed Apr 25 21:19:35 2012
-Return-path: <buildd at biber.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at murphy.debian.org Sat May 12 07:28:37 2012
+Return-path: <buildd at murphy.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at biber.debian.org>)
- id 1SN9cc-0003rc-P7
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:34 +0000
-Received: from biber.debian.org ([2001:648:2ffc:deb:214:22ff:feb2:1268])
+ (Exim 4.72) (envelope-from <buildd at murphy.debian.org>)
+ id 1ST6kn-0001eP-DG
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:28:37 +0000
+Received: from murphy.debian.org ([70.103.162.31])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=biber.debian.org, EMAIL=hostmaster at biber.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at biber.debian.org>)
- id 1SN9cb-0006Ni-JW; Wed, 25 Apr 2012 21:19:33 +0000
-Received: from buildd by biber.debian.org with local (Exim 4.72)
- (envelope-from <buildd at biber.debian.org>)
- id 1SN9ca-0003di-Jd; Wed, 25 Apr 2012 21:19:32 +0000
-Message-Id: <E1SN9ca-0003di-Jd at biber.debian.org>
+ CN=murphy.debian.org, EMAIL=hostmaster at murphy.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at murphy.debian.org>)
+ id 1ST6kl-0004gY-E9
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:28:35 +0000
+Received: from buildd by murphy.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at murphy.debian.org>)
+ id 1ST6kj-0005Aq-VD; Sat, 12 May 2012 07:28:33 +0000
+Message-Id: <E1ST6kj-0005Aq-VD at murphy.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:19:32 +0000
-From: buildd on biber <buildd at biber.debian.org>
-To: kurt at roeckx.be,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on i386 (dist=sid)
-Key-Id: 6EBCB100
+Date: Sat, 12 May 2012 07:28:33 +0000
+From: buildd on murphy <buildd at murphy.debian.org>
+To: logs at buildd.debian.org,buildd-admin at murphy.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on i386 (dist=sid)
+Key-Id: 2B54027C
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on biber.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on murphy.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (i386) 25 Apr 2012 21:17 ║
+║ tabix 0.2.5-3 (i386) 12 May 2012 07:27 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: i386
-Get:1 http://ftp.gr.debian.org unstable InRelease [210 kB]
-Get:2 http://ftp.gr.debian.org unstable/main Sources [6244 kB]
-Get:3 http://incoming.debian.org unstable InRelease [210 kB]
-Get:4 http://ftp.gr.debian.org unstable/contrib Sources [53.9 kB]
-Get:5 http://ftp.gr.debian.org unstable/non-free Sources [97.9 kB]
-Get:6 http://ftp.gr.debian.org unstable/main i386 Packages [5973 kB]
-Get:7 http://ftp.gr.debian.org unstable/contrib i386 Packages [45.9 kB]
-Get:8 http://ftp.gr.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:9 http://ftp.gr.debian.org unstable/main Translation-en [3943 kB]
+Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Get:10 http://incoming.debian.org Release.gpg [836 B]
-Get:11 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:12 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:13 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:14 http://incoming.debian.org unstable/main i386 Packages [5974 kB]
-Get:15 http://incoming.debian.org unstable/contrib i386 Packages [45.9 kB]
-Get:16 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:17 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org Sources [33.5 kB]
-Get:20 http://incoming.debian.org Packages [517 kB]
+Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://incoming.debian.org sid/main Sources/DiffIndex
+Hit http://ftp.us.debian.org sid InRelease
+Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
+Hit http://incoming.debian.org sid/main i386 Packages/DiffIndex
+Hit http://incoming.debian.org sid/contrib i386 Packages/DiffIndex
+Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
+Get:2 http://incoming.debian.org Release [1601 B]
+Get:3 http://incoming.debian.org Sources [43.6 kB]
+Hit http://ftp.us.debian.org sid/main Sources/DiffIndex
+Get:4 http://incoming.debian.org Packages [767 kB]
+Hit http://ftp.us.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.us.debian.org sid/main i386 Packages/DiffIndex
+Hit http://ftp.us.debian.org sid/contrib i386 Packages/DiffIndex
+Hit http://ftp.us.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://ftp.us.debian.org sid/main Translation-en/DiffIndex
Ign http://incoming.debian.org Translation-en
-Fetched 33.8 MB in 28s (1197 kB/s)
+Fetched 813 kB in 6s (132 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -81,11 +80,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (69.3 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (176 kB/s)
Download complete and in download only mode
Check arch
@@ -99,18 +98,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -122,19 +121,19 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
+coreutils: already installed (8.13-3.2)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.3)
e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
grep: already installed (2.11-3)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
-perl-base: already installed (5.14.2-9)
+ncurses-base: already installed (5.9-7)
+ncurses-bin: already installed (5.9-7)
+perl-base: already installed (5.14.2-10)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
sysvinit-utils: already installed (2.88dsf-22.1)
@@ -143,13 +142,13 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+libc6-dev: already installed (2.13-32)
+gcc: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -158,8 +157,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -168,49 +167,34 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 20 not upgraded.
-Need to get 9931 kB of archives.
-After this operation, 25.8 MB of additional disk space will be used.
-Get:1 http://ftp.gr.debian.org/debian/ unstable/main libpipeline1 i386 1.2.1-1 [38.6 kB]
-Get:2 http://ftp.gr.debian.org/debian/ unstable/main libmagic1 i386 5.11-1 [250 kB]
-Get:3 http://ftp.gr.debian.org/debian/ unstable/main libpcre3 i386 1:8.30-4 [240 kB]
-Get:4 http://ftp.gr.debian.org/debian/ unstable/main libxml2 i386 2.7.8.dfsg-9 [886 kB]
-Get:5 http://ftp.gr.debian.org/debian/ unstable/main libffi5 i386 3.0.10-3 [21.0 kB]
-Get:6 http://ftp.gr.debian.org/debian/ unstable/main libglib2.0-0 i386 2.32.0-4 [2048 kB]
-Get:7 http://ftp.gr.debian.org/debian/ unstable/main libcroco3 i386 0.6.5-1 [151 kB]
-Get:8 http://ftp.gr.debian.org/debian/ unstable/main libunistring0 i386 0.9.3-5 [442 kB]
-Get:9 http://ftp.gr.debian.org/debian/ unstable/main bsdmainutils i386 9.0.1 [205 kB]
-Get:10 http://ftp.gr.debian.org/debian/ unstable/main groff-base i386 1.21-7 [1128 kB]
-Get:11 http://ftp.gr.debian.org/debian/ unstable/main man-db i386 2.6.1-2 [1051 kB]
-Get:12 http://ftp.gr.debian.org/debian/ unstable/main file i386 5.11-1 [52.7 kB]
-Get:13 http://ftp.gr.debian.org/debian/ unstable/main gettext-base i386 0.18.1.1-5 [133 kB]
-Get:14 http://ftp.gr.debian.org/debian/ unstable/main html2text i386 1.3.2a-15 [101 kB]
-Get:15 http://ftp.gr.debian.org/debian/ unstable/main gettext i386 0.18.1.1-5 [2025 kB]
-Get:16 http://ftp.gr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.gr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.gr.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.gr.debian.org/debian/ unstable/main zlib1g-dev i386 1:1.2.6.dfsg-2 [210 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9931 kB in 0s (12.6 MB/s)
+0 upgraded, 21 newly installed, 0 to remove and 4 not upgraded.
+Need to get 0 B/10.0 MB of archives.
+After this operation, 26.0 MB of additional disk space will be used.
Selecting previously unselected package libpipeline1:i386.
-(Reading database ... 10816 files and directories currently installed.)
+(Reading database ... 10990 files and directories currently installed.)
Unpacking libpipeline1:i386 (from .../libpipeline1_1.2.1-1_i386.deb) ...
+Selecting previously unselected package libasprintf0c2:i386.
+Unpacking libasprintf0c2:i386 (from .../libasprintf0c2_0.18.1.1-7_i386.deb) ...
Selecting previously unselected package libmagic1:i386.
Unpacking libmagic1:i386 (from .../libmagic1_5.11-1_i386.deb) ...
Selecting previously unselected package libpcre3:i386.
-Unpacking libpcre3:i386 (from .../libpcre3_1%3a8.30-4_i386.deb) ...
+Unpacking libpcre3:i386 (from .../libpcre3_1%3a8.30-5_i386.deb) ...
Selecting previously unselected package libxml2:i386.
Unpacking libxml2:i386 (from .../libxml2_2.7.8.dfsg-9_i386.deb) ...
Selecting previously unselected package libffi5:i386.
Unpacking libffi5:i386 (from .../libffi5_3.0.10-3_i386.deb) ...
Selecting previously unselected package libglib2.0-0:i386.
-Unpacking libglib2.0-0:i386 (from .../libglib2.0-0_2.32.0-4_i386.deb) ...
+Unpacking libglib2.0-0:i386 (from .../libglib2.0-0_2.32.2-1_i386.deb) ...
Selecting previously unselected package libcroco3:i386.
Unpacking libcroco3:i386 (from .../libcroco3_0.6.5-1_i386.deb) ...
Selecting previously unselected package libunistring0:i386.
Unpacking libunistring0:i386 (from .../libunistring0_0.9.3-5_i386.deb) ...
+Selecting previously unselected package libgettextpo0:i386.
+Unpacking libgettextpo0:i386 (from .../libgettextpo0_0.18.1.1-7_i386.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_i386.deb) ...
Selecting previously unselected package groff-base.
@@ -220,28 +204,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_i386.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_i386.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_i386.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_i386.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_i386.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_i386.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:i386.
-Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_i386.deb) ...
+Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_i386.deb) ...
Setting up libpipeline1:i386 (1.2.1-1) ...
+Setting up libasprintf0c2:i386 (0.18.1.1-7) ...
Setting up libmagic1:i386 (5.11-1) ...
-Setting up libpcre3:i386 (1:8.30-4) ...
+Setting up libpcre3:i386 (1:8.30-5) ...
Setting up libxml2:i386 (2.7.8.dfsg-9) ...
Setting up libffi5:i386 (3.0.10-3) ...
-Setting up libglib2.0-0:i386 (2.32.0-4) ...
+Setting up libglib2.0-0:i386 (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:i386 (0.6.5-1) ...
Setting up libunistring0:i386 (0.9.3-5) ...
+Setting up libgettextpo0:i386 (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -249,22 +235,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:i386 (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:i386 (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-amd64 i386 (x86_64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
-Package versions: apt_0.9.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libquadmath0_4.7.0-3 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-686-bigmem i386 (i686)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.7_4.7.0-8 gcc-4.7_4.7.0-8 libc6-dev_2.13-32 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8 linux-libc-dev_3.2.16-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.7.0-6 cpp-4.7_4.7.0-8 dash_0.5.7-3 debconf_1.5.43 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.7.0-6 g++-4.7_4.7.0-8 gawk_1:4.0.1+dfsg-1 gcc_4:4.7.0-6 gcc-4.7_4.7.0-8 gcc-4.7-base_4.7.0-8 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.3 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-7 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-2 libdpkg-perl_1.16.3 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-8 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1.1 libgomp1_4.7.0-8 libitm1_4.7.0-8 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libquadmath0_4.7.0-8 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libsigsegv2_2.9-4 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.16-1 login_1:4.1.5-1 lsb-base_4.1+Debian2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-10 perl-base_5.14.2-10 perl-modules_5.14.2-10 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -275,14 +261,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -292,46 +279,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture i386
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -371,9 +358,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-i386-RnqN3R/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-i386-WngUvJ/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -383,73 +370,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_i386.deb'.
- dpkg-genchanges -B -mi386 Build Daemon <buildd_i386-biber at buildd.debian.org> >../tabix_0.2.5-2_i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_i386.deb'.
+ dpkg-genchanges -B -mi386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org> >../tabix_0.2.5-3_i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2119
+Build finished at 20120512-0728
-tabix_0.2.5-2_i386.changes:
+tabix_0.2.5-3_i386.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: i386
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: i386 Build Daemon <buildd_i386-biber at buildd.debian.org>
+Maintainer: i386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 2a80453bea4ac5a2b9c0801408e525455ccf4968 62738 tabix_0.2.5-2_i386.deb
+ 81a272ed0b738452aa13c4bbc01174f250ec8b1e 57276 tabix_0.2.5-3_i386.deb
Checksums-Sha256:
- 49f78b142ae756bc53439130b0c57406be94b2f2c84508886c893875d973d3b6 62738 tabix_0.2.5-2_i386.deb
+ 0500f0486c92b3d98ad444b02f158430bdf553328d1830fcb46a7c70be9cab87 57276 tabix_0.2.5-3_i386.deb
Files:
- ef7fcad8a6178d9f264d616bc3e0f3be 62738 science optional tabix_0.2.5-2_i386.deb
+ 53bfec634fc246b17de5f9b60a0dba04 57276 science optional tabix_0.2.5-3_i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_i386.deb
+tabix_0.2.5-3_i386.deb
──────────────────────
new debian package, version 2.0.
- size 62738 bytes: control archive= 994 bytes.
+ size 57276 bytes: control archive= 994 bytes.
779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 151
+ Installed-Size: 150
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -462,26 +438,26 @@ tabix_0.2.5-2_i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/bin/
--rwxr-xr-x root/root 71812 2012-04-25 21:18 ./usr/bin/tabix
--rwxr-xr-x root/root 26452 2012-04-25 21:18 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/bin/
+-rwxr-xr-x root/root 26192 2012-05-12 07:28 ./usr/bin/bgzip
+-rwxr-xr-x root/root 71408 2012-05-12 07:28 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:28 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:28 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:18 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2012-04-25 21:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+lrwxrwxrwx root/root 0 2012-05-12 07:28 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -495,26 +471,73 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-i386-sbuild-1b4c1252-ba6e-44e6-aa83-6216f90c0064/build/buildd-tabix_0.2.5-2-i386-RnqN3R
-Not cleaning session: cloned chroot in use
+Purging /var/lib/schroot/mount/sid-i386-sbuild-88d0e2d0-05e2-43a6-8127-72df96738c1f/build/buildd-tabix_0.2.5-3-i386-WngUvJ
+Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
+Reading package lists...
+Building dependency tree...
+Reading state information...
+The following packages will be REMOVED:
+ bsdmainutils* debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libasprintf0c2* libcroco3* libffi5* libgettextpo0*
+ libglib2.0-0* libmagic1* libpcre3* libpipeline1* libunistring0* libxml2*
+ man-db* po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 21 to remove and 4 not upgraded.
+After this operation, 26.0 MB disk space will be freed.
+(Reading database ... 12402 files and directories currently installed.)
+Removing debhelper ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing bsdmainutils ...
+Purging configuration files for bsdmainutils ...
+Removing file ...
+Removing po-debconf ...
+Removing intltool-debian ...
+Removing gettext ...
+Removing gettext-base ...
+Removing groff-base ...
+Purging configuration files for groff-base ...
+Removing html2text ...
+Purging configuration files for html2text ...
+Removing libasprintf0c2:i386 ...
+Removing libcroco3:i386 ...
+Purging configuration files for libcroco3:i386 ...
+Removing libglib2.0-0:i386 ...
+Purging configuration files for libglib2.0-0:i386 ...
+Removing libffi5:i386 ...
+Purging configuration files for libffi5:i386 ...
+Removing libgettextpo0:i386 ...
+Removing libmagic1:i386 ...
+Purging configuration files for libmagic1:i386 ...
+Removing libpcre3:i386 ...
+Purging configuration files for libpcre3:i386 ...
+Removing libpipeline1:i386 ...
+Purging configuration files for libpipeline1:i386 ...
+Removing libunistring0:i386 ...
+Purging configuration files for libunistring0:i386 ...
+Removing libxml2:i386 ...
+Purging configuration files for libxml2:i386 ...
+Removing zlib1g-dev:i386 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: i386
-Build-Space: 1520
-Build-Time: 12
+Build-Space: 1668
+Build-Time: 13
Distribution: sid
-Install-Time: 35
-Job: tabix_0.2.5-2
+Install-Time: 11
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 88
-Source-Version: 0.2.5-2
-Space: 1520
+Package-Time: 37
+Source-Version: 0.2.5-3
+Space: 1668
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2119
-Build needed 00:01:28, 1520k disc space
-Signature with key '6EBCB100' requested:
+Finished at 20120512-0728
+Build needed 00:00:37, 1668k disc space
+Signature with key '2B54027C' requested:
diff --git a/ia64.log b/ia64.log
index 0233fa0..8012d7b 100644
--- a/ia64.log
+++ b/ia64.log
@@ -1,160 +1,68 @@
-From buildd at caballero.debian.org Wed Apr 25 21:14:26 2012
-Return-path: <buildd at caballero.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at mundy.debian.org Sat May 12 07:31:01 2012
+Return-path: <buildd at mundy.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
- id 1SN9Xd-0002oz-Lx
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:14:26 +0000
-Received: from caballero.debian.org ([193.201.200.200])
+ (Exim 4.72) (envelope-from <buildd at mundy.debian.org>)
+ id 1ST6n7-00023F-Oe
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:31:01 +0000
+Received: from mundy.debian.org ([192.25.206.62])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=caballero.debian.org,
- EMAIL=hostmaster at caballero.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
- id 1SN9Xc-00068m-3R; Wed, 25 Apr 2012 21:14:24 +0000
-Received: from buildd by caballero.debian.org with local (Exim 4.72)
- (envelope-from <buildd at caballero.debian.org>) id 1SN9Xb-0001a9-8R
- for buildd-porters at caballero.debian.org; Wed, 25 Apr 2012 21:14:23 +0000
-Date: Wed, 25 Apr 2012 21:14:23 +0000
-Message-Id: <E1SN9Xb-0001a9-8R at caballero.debian.org>
-From: buildd on caballero <buildd at caballero.debian.org>
-To: buildd-porters at caballero.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on ia64 (dist=sid)
+ CN=mundy.debian.org, EMAIL=hostmaster at mundy.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at mundy.debian.org>)
+ id 1ST6n6-0005wK-Fg; Sat, 12 May 2012 07:31:01 +0000
+Received: from buildd by mundy.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at mundy.debian.org>)
+ id 1ST6n3-0000Sq-QW; Sat, 12 May 2012 07:30:57 +0000
+Date: Sat, 12 May 2012 07:30:57 +0000
+Message-Id: <E1ST6n3-0000Sq-QW at mundy.debian.org>
+From: buildd on mundy <buildd at mundy.debian.org>
+To: dannf at master.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on ia64 (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Delivered-To: buildd-porters at caballero.debian.org
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on caballero.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mundy.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (ia64) 25 Apr 2012 21:13 ║
+║ tabix 0.2.5-3 (ia64) 12 May 2012 07:28 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: ia64
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Hit http://mirror.positive-internet.com sid InRelease
-Hit http://mirror.positive-internet.com sid/main Sources/DiffIndex
-Get:1 http://incoming.debian.org sid InRelease [210 kB]
+Get:1 http://spohr.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://spohr.debian.org unstable/main Sources [6282 kB]
+Get:4 http://spohr.debian.org unstable/contrib Sources [54.7 kB]
+Get:5 http://spohr.debian.org unstable/non-free Sources [96.6 kB]
+Get:6 http://spohr.debian.org unstable/main ia64 Packages [5705 kB]
Ign http://incoming.debian.org InRelease
-Hit http://mirror.positive-internet.com sid/contrib Sources/DiffIndex
-Hit http://mirror.positive-internet.com sid/main ia64 Packages/DiffIndex
-Hit http://mirror.positive-internet.com sid/contrib ia64 Packages/DiffIndex
-Hit http://mirror.positive-internet.com sid/contrib Translation-en/DiffIndex
-Hit http://mirror.positive-internet.com sid/main Translation-en/DiffIndex
-Get:2 http://incoming.debian.org Release.gpg [836 B]
-Get:3 http://incoming.debian.org sid/main Sources/DiffIndex [7876 B]
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Get:4 http://incoming.debian.org sid/main ia64 Packages/DiffIndex [7876 B]
-Hit http://incoming.debian.org sid/contrib ia64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
-Get:5 http://incoming.debian.org sid/main Translation-en/DiffIndex [7876 B]
-Get:6 http://incoming.debian.org Release [1601 B]
-Get:7 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [8469 B]
-Get:8 http://incoming.debian.org sid/main ia64 2012-04-25-2014.24.pdiff [7314 B]
-Get:9 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [416 B]
-Get:10 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [8469 B]
-Get:11 http://incoming.debian.org Sources [33.5 kB]
-Get:12 http://incoming.debian.org Packages [517 kB]
+Get:7 http://incoming.debian.org Release.gpg [836 B]
+Get:8 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:9 http://spohr.debian.org unstable/contrib ia64 Packages [37.6 kB]
+Ign http://spohr.debian.org unstable/contrib TranslationIndex
+Get:10 http://spohr.debian.org unstable/main TranslationIndex [2295 B]
+Get:11 http://spohr.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://spohr.debian.org unstable/main Translation-en [3953 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:15 http://incoming.debian.org unstable/main ia64 Packages [5705 kB]
+Get:16 http://incoming.debian.org unstable/contrib ia64 Packages [37.6 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:21 http://incoming.debian.org Sources [43.6 kB]
+Get:22 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Get:13 http://incoming.debian.org sid/main ia64 2012-04-25-2014.24.pdiff [7314 B]
-Get:14 http://incoming.debian.org sid/main 2012-04-25-2014.24.pdiff [416 B]
-Fetched 802 kB in 21s (36.9 kB/s)
+Fetched 33.6 MB in 22s (1491 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -166,80 +74,20 @@ Check APT
─────────
Checking available source versions...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Download source files with APT
──────────────────────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (123 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (117 kB/s)
Download complete and in download only mode
Check arch
@@ -252,170 +100,20 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
build-essential: already installed (11.5)
fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 64 not upgraded.
Removing negative dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 64 not upgraded.
Checking correctness of dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install tabix build dependencies (internal resolver) │
@@ -423,51 +121,21 @@ I: This option will be removed in the future; please update your configuration
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
-debianutils: already installed (4.2.2)
+debianutils: already installed (4.2.1)
diffutils: already installed (1:3.2-2)
dpkg: already installed (1.16.2)
-e2fsprogs: already installed (1.42.2-2)
+e2fsprogs: already installed (1.42.1-2)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-6)
+ncurses-bin: already installed (5.9-4)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -477,148 +145,139 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
-libc6.1-dev: already installed (2.13-30)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
+libc6.1-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
-debhelper: already installed (9.20120410 >= 9 is satisfied)
-zlib1g-dev: already installed (1:1.2.6.dfsg-2)
+debhelper: missing
+Using default version 9.20120509
+zlib1g-dev: missing
Checking for dependency conflicts...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Installing positive dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
+Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+The following extra packages will be installed:
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
+Suggested packages:
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
+Recommended packages:
+ curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl
+The following NEW packages will be installed:
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 20 newly installed, 0 to remove and 63 not upgraded.
+Need to get 11.6 MB of archives.
+After this operation, 34.3 MB of additional disk space will be used.
+Get:1 http://spohr.debian.org/debian/ unstable/main zlib1g ia64 1:1.2.7.dfsg-1 [118 kB]
+Get:2 http://spohr.debian.org/debian/ unstable/main libpipeline1 ia64 1.2.1-1 [48.2 kB]
+Get:3 http://spohr.debian.org/debian/ unstable/main libasprintf0c2 ia64 0.18.1.1-7 [27.2 kB]
+Get:4 http://spohr.debian.org/debian/ unstable/main libmagic1 ia64 5.11-1 [275 kB]
+Get:5 http://spohr.debian.org/debian/ unstable/main libxml2 ia64 2.7.8.dfsg-9 [1179 kB]
+Get:6 http://spohr.debian.org/debian/ unstable/main libffi5 ia64 3.0.10-3 [35.5 kB]
+Get:7 http://spohr.debian.org/debian/ unstable/main libglib2.0-0 ia64 2.32.2-1 [2433 kB]
+Get:8 http://spohr.debian.org/debian/ unstable/main libcroco3 ia64 0.6.5-1 [175 kB]
+Get:9 http://spohr.debian.org/debian/ unstable/main libunistring0 ia64 0.9.3-5 [463 kB]
+Get:10 http://spohr.debian.org/debian/ unstable/main libgettextpo0 ia64 0.18.1.1-7 [205 kB]
+Get:11 http://spohr.debian.org/debian/ unstable/main bsdmainutils ia64 9.0.1 [240 kB]
+Get:12 http://spohr.debian.org/debian/ unstable/main groff-base ia64 1.21-7 [1376 kB]
+Get:13 http://spohr.debian.org/debian/ unstable/main man-db ia64 2.6.1-2 [1156 kB]
+Get:14 http://spohr.debian.org/debian/ unstable/main file ia64 5.11-1 [55.3 kB]
+Get:15 http://spohr.debian.org/debian/ unstable/main gettext-base ia64 0.18.1.1-7 [172 kB]
+Get:16 http://spohr.debian.org/debian/ unstable/main html2text ia64 1.3.2a-15 [134 kB]
+Get:17 http://spohr.debian.org/debian/ unstable/main gettext ia64 0.18.1.1-7 [2264 kB]
+Get:18 http://spohr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:19 http://spohr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:20 http://spohr.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:21 http://spohr.debian.org/debian/ unstable/main zlib1g-dev ia64 1:1.2.7.dfsg-1 [251 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 11.6 MB in 1s (10.9 MB/s)
+(Reading database ... 10760 files and directories currently installed.)
+Preparing to replace zlib1g:ia64 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_ia64.deb) ...
+Unpacking replacement zlib1g:ia64 ...
+Setting up zlib1g:ia64 (1:1.2.7.dfsg-1) ...
+Selecting previously unselected package libpipeline1:ia64.
+(Reading database ... 10760 files and directories currently installed.)
+Unpacking libpipeline1:ia64 (from .../libpipeline1_1.2.1-1_ia64.deb) ...
+Selecting previously unselected package libasprintf0c2:ia64.
+Unpacking libasprintf0c2:ia64 (from .../libasprintf0c2_0.18.1.1-7_ia64.deb) ...
+Selecting previously unselected package libmagic1:ia64.
+Unpacking libmagic1:ia64 (from .../libmagic1_5.11-1_ia64.deb) ...
+Selecting previously unselected package libxml2:ia64.
+Unpacking libxml2:ia64 (from .../libxml2_2.7.8.dfsg-9_ia64.deb) ...
+Selecting previously unselected package libffi5:ia64.
+Unpacking libffi5:ia64 (from .../libffi5_3.0.10-3_ia64.deb) ...
+Selecting previously unselected package libglib2.0-0:ia64.
+Unpacking libglib2.0-0:ia64 (from .../libglib2.0-0_2.32.2-1_ia64.deb) ...
+Selecting previously unselected package libcroco3:ia64.
+Unpacking libcroco3:ia64 (from .../libcroco3_0.6.5-1_ia64.deb) ...
+Selecting previously unselected package libunistring0:ia64.
+Unpacking libunistring0:ia64 (from .../libunistring0_0.9.3-5_ia64.deb) ...
+Selecting previously unselected package libgettextpo0:ia64.
+Unpacking libgettextpo0:ia64 (from .../libgettextpo0_0.18.1.1-7_ia64.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_ia64.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_ia64.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.1-2_ia64.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../archives/file_5.11-1_ia64.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_ia64.deb) ...
+Selecting previously unselected package html2text.
+Unpacking html2text (from .../html2text_1.3.2a-15_ia64.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-7_ia64.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
+Selecting previously unselected package zlib1g-dev:ia64.
+Unpacking zlib1g-dev:ia64 (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_ia64.deb) ...
+Setting up libpipeline1:ia64 (1.2.1-1) ...
+Setting up libasprintf0c2:ia64 (0.18.1.1-7) ...
+Setting up libmagic1:ia64 (5.11-1) ...
+Setting up libxml2:ia64 (2.7.8.dfsg-9) ...
+Setting up libffi5:ia64 (3.0.10-3) ...
+Setting up libglib2.0-0:ia64 (2.32.2-1) ...
+No schema files found: doing nothing.
+Setting up libcroco3:ia64 (0.6.5-1) ...
+Setting up libunistring0:ia64 (0.9.3-5) ...
+Setting up libgettextpo0:ia64 (0.18.1.1-7) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
+Building database of manual pages ...
+Setting up file (5.11-1) ...
+Setting up gettext-base (0.18.1.1-7) ...
+Setting up html2text (1.3.2a-15) ...
+Setting up gettext (0.18.1.1-7) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:ia64 (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 63 not upgraded.
Checking correctness of dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Kernel: Linux 2.6.32-bpo.5-mckinley ia64 (ia64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.12-1
-Package versions: apt_0.9.1 apt-utils_0.9.1 autoconf_2.68-1 automake_1:1.11.5-1 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 ca-certificates_20120212 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.2 diffutils_1:3.2-2 docutils-common_0.8.1-6 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool_0.50.2-2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-inst1.5_0.9.1 libapt-pkg-dev_0.9.1 libapt-pkg4.12_0.9.1 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6.1_2.13-30 libc6.1-dev_2.13-30 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb4.8_4.8.30-11 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libencode-locale-perl_1.03-1 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfile-listing-perl_6.04-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libhtml-parser-perl_3.69-2 libhtml-tagset-perl_3.20-2 libhtml-tree-perl_4.2-1 libhttp-cookies-perl_6.00-2 libhttp-date-perl_6.02-1 libhttp-message-perl_6.03-1 libhttp-negotiate-perl_6.00-2 libio-socket-ssl-perl_1.62-1 libjs-jquery_1.7.2-1 libjs-sphinxdoc_1.1.3+dfsg-3 libjs-underscore_1.3.3-1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.03-1 liblzma2_5.0.0-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libnet-http-perl_6.03-1 libnet-ssleay-perl_1.47-1 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpython2.6_2.6.7-4 libpython2.7_2.7.3~rc2-1 libpython3.2_3.2.3~rc2-1 libquadmath0_4.7.0-4 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-8 libsqlite3-0_3.7.11-2 libss2_1.42.2-1 libssl-dev_1.0.1-4 libssl1.0.0_1.0.1-4 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libunwind7_0.99-0.3 libunwind7-dev_0.99-0.3 liburi-perl_1.60-1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libwww-perl_6.04-1 libwww-robotrules-perl_6.01-1 libxml-parser-perl_2.41-1+b1 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 m4_1.4.16-2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 openssl_1.0.1-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 python_2.7.2-10 python-all_2.7.2-10 python-all-dbg_2.7.2-10 python-all-dev_2.7.2-10 python-chardet_2.0.1-2 python-dbg_2.7.2-10 python-debian_0.1.21 python-dev_2.7.2-10 python-distutils-extra_2.32-2 python-docutils_0.8.1-6 python-jinja2_2.6-1 python-markupsafe_0.15-1 python-minimal_2.7.2-10 python-pygments_1.5+dfsg-1 python-roman_0.8.1-6 python-sphinx_1.1.3+dfsg-3 python-support_1.0.14 python2.6_2.6.7-4 python2.6-dbg_2.6.7-4 python2.6-dev_2.6.7-4 python2.6-minimal_2.6.7-4 python2.7_2.7.3~rc2-1 python2.7-dbg_2.7.3~rc2-1 python2.7-dev_2.7.3~rc2-1 python2.7-minimal_2.7.3~rc2-1 python3_3.2.3~rc1-2 python3-all_3.2.3~rc1-2 python3-all-dbg_3.2.3~rc1-2 python3-all-dev_3.2.3~rc1-2 python3-dbg_3.2.3~rc1-2 python3-dev_3.2.3~rc1-2 python3-minimal_3.2.3~rc1-2 python3.2_3.2.3~rc2-1 python3.2-dbg_3.2.3~rc2-1 python3.2-dev_3.2.3~rc2-1 python3.2-minimal_3.2.3~rc2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 sphinx-common_1.1.3+dfsg-3 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-mckinley ia64 (ia64)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6.1-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.12-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6.1_2.13-27 libc6.1-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_8.12-4 libpipeline1_1.2.1-1 libquadmath0_4.6.3-1 libreadline6_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libunwind7_0.99-0.3 libunwind7-dev_0.99-0.3 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -628,45 +287,16 @@ Package versions: apt_0.9.1 apt-utils_0.9.1 autoconf_2.68-1 automake_1:1.11.5-1
Unpack source
─────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -675,77 +305,47 @@ Check disc space
dpkg-buildpackage
─────────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture ia64
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -785,9 +385,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-ia64-mGnDax/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -797,70 +397,59 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_ia64.deb'.
- dpkg-genchanges -B -mia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org> >../tabix_0.2.5-2_ia64.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_ia64.deb'.
+ dpkg-genchanges -B -mia64 Build Daemon (mundy) <buildd_ia64-mundy at buildd.debian.org> >../tabix_0.2.5-3_ia64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2114
+Build finished at 20120512-0730
-tabix_0.2.5-2_ia64.changes:
+tabix_0.2.5-3_ia64.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: ia64
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: ia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org>
+Maintainer: ia64 Build Daemon (mundy) <buildd_ia64-mundy at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
- .
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- fe4426c5f859644c3e80137d978452a80b79f10e 88262 tabix_0.2.5-2_ia64.deb
+ 5756a3d3c618e09bcf8d49e51f2b247bc27b274a 88656 tabix_0.2.5-3_ia64.deb
Checksums-Sha256:
- e1c2193e474ce9f21b18b62c66d578de31eb3ac81f11a31c416a36eb15b9e25c 88262 tabix_0.2.5-2_ia64.deb
+ dd5034ee2846492838933f8a341ddb2fae2e3e3caa1d76ea674f7616c5a477f6 88656 tabix_0.2.5-3_ia64.deb
Files:
- 9bad52ef1336445bef61f29f909e6bcf 88262 science optional tabix_0.2.5-2_ia64.deb
+ 67c9a3683673cc5b6258275efdf52a0f 88656 science optional tabix_0.2.5-3_ia64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_ia64.deb
+tabix_0.2.5-3_ia64.deb
──────────────────────
new debian package, version 2.0.
- size 88262 bytes: control archive= 993 bytes.
+ size 88656 bytes: control archive= 992 bytes.
781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: ia64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Installed-Size: 244
@@ -876,26 +465,26 @@ tabix_0.2.5-2_ia64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/bin/
--rwxr-xr-x root/root 141784 2012-04-25 21:14 ./usr/bin/tabix
--rwxr-xr-x root/root 51936 2012-04-25 21:14 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:14 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:14 ./usr/share/man/man1/tabix.1.gz
-lrwxrwxrwx root/root 0 2012-04-25 21:14 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:30 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:30 ./usr/bin/
+-rwxr-xr-x root/root 51936 2012-05-12 07:30 ./usr/bin/bgzip
+-rwxr-xr-x root/root 141784 2012-05-12 07:30 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2012-05-12 07:30 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -909,183 +498,27 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ia64-sbuild-9b2c21e4-a406-45ba-b28b-ab68e84ea13b/build/buildd-tabix_0.2.5-2-ia64-mGnDax
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 31 not upgraded.
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
+Purging /var/lib/schroot/mount/sid-ia64-sbuild-540e374e-6f55-4314-9a16-8a1c4140fab0/build/buildd-tabix_0.2.5-3-ia64-Q7K_ds
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: ia64
-Build-Space: 2264
-Build-Time: 28
+Build-Space: 2276
+Build-Time: 31
Distribution: sid
-Install-Time: 8
-Job: tabix_0.2.5-2
+Install-Time: 65
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 70
-Source-Version: 0.2.5-2
-Space: 2264
+Package-Time: 160
+Source-Version: 0.2.5-3
+Space: 2276
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2114
-Build needed 00:01:10, 2264k disc space
+Finished at 20120512-0730
+Build needed 00:02:40, 2276k disc space
+Signature with key 'A2605B34' requested:
diff --git a/info b/info
index 7abf438..190db76 100644
--- a/info
+++ b/info
@@ -1,13 +1,13 @@
-ia64~1335388467~sid~successful
-powerpc~1335388677~sid~successful
-kfreebsd-i386~1335388721~sid~successful
-armhf~1335388774~sid~successful
-i386~1335388775~sid~successful
-sparc~1335388801~sid~successful
-armel~1335388974~sid~successful
-hurd-i386~1335389016~sid~successful
-s390~1335389214~sid~successful
-mips~1335390477~sid~successful
-s390x~1335390592~sid~successful
-kfreebsd-amd64~1335396225~sid~successful
-mipsel~1335403694~sid~successful
+i386~1336807718~sid~successful
+powerpc~1336807840~sid~successful
+ia64~1336807862~sid~successful
+s390x~1336807920~sid~successful
+s390~1336807950~sid~successful
+armhf~1336807971~sid~successful
+sparc~1336807976~sid~successful
+kfreebsd-i386~1336808042~sid~successful
+kfreebsd-amd64~1336808085~sid~successful
+mipsel~1336808144~sid~successful
+hurd-i386~1336808269~sid~successful
+mips~1336813335~sid~successful
+armel~1336814138~sid~successful
diff --git a/kfreebsd-amd64.log b/kfreebsd-amd64.log
index f606542..3b55b46 100644
--- a/kfreebsd-amd64.log
+++ b/kfreebsd-amd64.log
@@ -1,72 +1,64 @@
-From buildd at fasch.debian.org Wed Apr 25 23:23:43 2012
-Return-path: <buildd at fasch.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at fano.debian.org Sat May 12 07:34:45 2012
+Return-path: <buildd at fano.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
- id 1SNBYl-0006IJ-L5
- for logs at buildd.debian.org; Wed, 25 Apr 2012 23:23:43 +0000
-Received: from fasch.debian.org ([194.177.211.201])
+ (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
+ id 1ST6qi-0002Wm-Uz
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:34:45 +0000
+Received: from fano.debian.org ([206.12.19.110])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=fasch.debian.org, EMAIL=hostmaster at fasch.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
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-Message-Id: <E1SNBYj-000Dwj-G8 at fasch.debian.org>
+ CN=fano.debian.org, EMAIL=hostmaster at fano.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
+ id 1ST6qg-0006Lu-3J; Sat, 12 May 2012 07:34:42 +0000
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+ id 1ST6qd-000Lcj-MT; Sat, 12 May 2012 07:34:39 +0000
+Message-Id: <E1ST6qd-000Lcj-MT at fano.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 23:23:41 +0000
-From: buildd on fasch <buildd at fasch.debian.org>
+Date: Sat, 12 May 2012 07:34:39 +0000
+From: buildd on fano <buildd at fano.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on kfreebsd-amd64 (dist=sid)
-Key-Id: 94C0145B
+Subject: Log for successful build of tabix_0.2.5-3 on kfreebsd-amd64 (dist=sid)
+Key-Id: 4584BE29
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fasch.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fano.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (kfreebsd-amd64) 25 Apr 2012 23:20 ║
+║ tabix 0.2.5-3 (kfreebsd-amd64) 12 May 2012 07:33 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: kfreebsd-amd64
-Hit http://ftp.gr.debian.org sid InRelease
-Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
-Hit http://ftp.gr.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Hit http://ftp.gr.debian.org sid/contrib Translation-en/DiffIndex
-Hit http://ftp.gr.debian.org sid/main Translation-en/DiffIndex
-Hit http://ftp.gr.debian.org sid/non-free Translation-en/DiffIndex
Get:1 http://incoming.debian.org Release.gpg [836 B]
-Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
-Hit http://incoming.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
-Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
-Hit http://incoming.debian.org sid/non-free Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/main Sources
+Hit http://incoming.debian.org sid/contrib Sources
+Hit http://incoming.debian.org sid/main kfreebsd-amd64 Packages
+Hit http://incoming.debian.org sid/contrib kfreebsd-amd64 Packages
+Hit http://incoming.debian.org sid/contrib Translation-en
+Hit http://incoming.debian.org sid/main Translation-en
Get:2 http://incoming.debian.org Release [1601 B]
-Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages
-Get:3 http://incoming.debian.org Sources [30.7 kB]
-Get:4 http://incoming.debian.org Packages [479 kB]
+Get:3 http://incoming.debian.org Sources [43.6 kB]
+Get:4 http://incoming.debian.org Packages [767 kB]
+Hit http://mirror-ubc.debian.org sid InRelease
+Hit http://mirror-ubc.debian.org sid/main Sources
+Hit http://mirror-ubc.debian.org sid/contrib Sources
+Hit http://mirror-ubc.debian.org sid/main kfreebsd-amd64 Packages
+Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-amd64 Packages
+Hit http://mirror-ubc.debian.org sid/contrib Translation-en
+Hit http://mirror-ubc.debian.org sid/main Translation-en
Ign http://incoming.debian.org Translation-en
-Fetched 512 kB in 5s (92.5 kB/s)
+Fetched 813 kB in 2s (321 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -87,11 +79,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 1s (52.1 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (104 kB/s)
Download complete and in download only mode
Check arch
@@ -111,12 +103,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -128,19 +120,19 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
+coreutils: already installed (8.13-3.2)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.3)
e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-freebsd-utils: already installed (9.0+ds1-3)
-grep: already installed (2.11-3)
+freebsd-utils: already installed (9.0+ds1-4)
+grep: already installed (2.12-1)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
+ncurses-base: already installed (5.9-7)
+ncurses-bin: already installed (5.9-7)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -150,12 +142,12 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -163,37 +155,47 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- file gettext gettext-base groff-base html2text intltool-debian libcroco3
- libffi5 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2 man-db
- po-debconf
+ bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
Suggested packages:
- dh-make gettext-doc groff less www-browser libmail-box-perl
+ wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
+ libmail-box-perl
Recommended packages:
curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
- debhelper file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpipeline1 libunistring0 libxml2
- man-db po-debconf zlib1g-dev
+ bsdmainutils debhelper file gettext gettext-base groff-base html2text
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 17 newly installed, 0 to remove and 1 not upgraded.
-Need to get 0 B/9555 kB of archives.
-After this operation, 23.7 MB of additional disk space will be used.
+0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/10.1 MB of archives.
+After this operation, 24.7 MB of additional disk space will be used.
Selecting previously unselected package libpipeline1:kfreebsd-amd64.
-(Reading database ... 11518 files and directories currently installed.)
+(Reading database ... 11477 files and directories currently installed.)
Unpacking libpipeline1:kfreebsd-amd64 (from .../libpipeline1_1.2.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libasprintf0c2:kfreebsd-amd64.
+Unpacking libasprintf0c2:kfreebsd-amd64 (from .../libasprintf0c2_0.18.1.1-7_kfreebsd-amd64.deb) ...
Selecting previously unselected package libmagic1:kfreebsd-amd64.
Unpacking libmagic1:kfreebsd-amd64 (from .../libmagic1_5.11-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpcre3:kfreebsd-amd64.
+Unpacking libpcre3:kfreebsd-amd64 (from .../libpcre3_1%3a8.30-5_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxml2:kfreebsd-amd64.
Unpacking libxml2:kfreebsd-amd64 (from .../libxml2_2.7.8.dfsg-9_kfreebsd-amd64.deb) ...
Selecting previously unselected package libffi5:kfreebsd-amd64.
Unpacking libffi5:kfreebsd-amd64 (from .../libffi5_3.0.10-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package libglib2.0-0:kfreebsd-amd64.
-Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.32.0-4_kfreebsd-amd64.deb) ...
+Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.32.2-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libcroco3:kfreebsd-amd64.
Unpacking libcroco3:kfreebsd-amd64 (from .../libcroco3_0.6.5-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libunistring0:kfreebsd-amd64.
Unpacking libunistring0:kfreebsd-amd64 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libgettextpo0:kfreebsd-amd64.
+Unpacking libgettextpo0:kfreebsd-amd64 (from .../libgettextpo0_0.18.1.1-7_kfreebsd-amd64.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_kfreebsd-amd64.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-amd64.deb) ...
Selecting previously unselected package man-db.
@@ -201,47 +203,53 @@ Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_5.11-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-amd64.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_kfreebsd-amd64.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-amd64.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_kfreebsd-amd64.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_kfreebsd-amd64.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:kfreebsd-amd64.
-Unpacking zlib1g-dev:kfreebsd-amd64 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-amd64.deb) ...
+Unpacking zlib1g-dev:kfreebsd-amd64 (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_kfreebsd-amd64.deb) ...
Setting up libpipeline1:kfreebsd-amd64 (1.2.1-1) ...
+Setting up libasprintf0c2:kfreebsd-amd64 (0.18.1.1-7) ...
Setting up libmagic1:kfreebsd-amd64 (5.11-1) ...
+Setting up libpcre3:kfreebsd-amd64 (1:8.30-5) ...
Setting up libxml2:kfreebsd-amd64 (2.7.8.dfsg-9) ...
Setting up libffi5:kfreebsd-amd64 (3.0.10-3) ...
-Setting up libglib2.0-0:kfreebsd-amd64 (2.32.0-4) ...
+Setting up libglib2.0-0:kfreebsd-amd64 (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:kfreebsd-amd64 (0.6.5-1) ...
Setting up libunistring0:kfreebsd-amd64 (0.9.3-5) ...
+Setting up libgettextpo0:kfreebsd-amd64 (0.18.1.1-7) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:kfreebsd-amd64 (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:kfreebsd-amd64 (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
Kernel: GNU/kFreeBSD 8.1-1-amd64 kfreebsd-amd64 (x86_64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1
-Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-3 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-3 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc0.1_2.13-30 libc0.1-dev_2.13-30 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libgssglue1_0.3-4 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncursesw5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libprocps0_1:3.3.2-3 libquadmath0_4.7.0-4 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-9 libss2_1.42.2-2 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 type-handling_0.2.23 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.7_4.7.0-8 gcc-4.7_4.7.0-8 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-32 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8
+Package versions: apt_0.9.3 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.7.0-6 cpp-4.7_4.7.0-8 dash_0.5.7-3 debconf_1.5.43 debconf-i18n_1.5.43 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-4 g++_4:4.7.0-6 g++-4.7_4.7.0-8 gcc_4:4.7.0-6 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6-base_4.6.3-5 gcc-4.7_4.7.0-8 gcc-4.7-base_4.7.0-8 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.12-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-4 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-7 libapt-pkg4.12_0.9.3 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-7 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc0.1_2.13-32 libc0.1-dev_2.13-32 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-2 libdpkg-perl_1.16.3 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-8 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1.1 libgomp1_4.7.0-8 libgssglue1_0.4-1 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libquadmath0_4.7.0-8 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian3 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -252,14 +260,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -269,46 +278,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-amd64
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -348,9 +357,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -360,73 +369,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_kfreebsd-amd64.deb'.
- dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org> >../tabix_0.2.5-2_kfreebsd-amd64.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_kfreebsd-amd64.deb'.
+ dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org> >../tabix_0.2.5-3_kfreebsd-amd64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2322
+Build finished at 20120512-0734
-tabix_0.2.5-2_kfreebsd-amd64.changes:
+tabix_0.2.5-3_kfreebsd-amd64.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: kfreebsd-amd64
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org>
+Maintainer: kfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 6c50b21ef399922a14530fdb57250d4fec5c25f5 58752 tabix_0.2.5-2_kfreebsd-amd64.deb
+ ea7f7020c38b8310cdd623a3c4d8c51806b686c8 59812 tabix_0.2.5-3_kfreebsd-amd64.deb
Checksums-Sha256:
- 8a8e99941f3c0f5ab3321f4ead39b5e61533820ba9ec8e97c0a4b45df251f462 58752 tabix_0.2.5-2_kfreebsd-amd64.deb
+ 6d504303efe43248882539c8aeb63e3e3b30bb461e5c12561a8f93795d78a916 59812 tabix_0.2.5-3_kfreebsd-amd64.deb
Files:
- b328daef86f497bda2d658994581d16a 58752 science optional tabix_0.2.5-2_kfreebsd-amd64.deb
+ 6a29681493ea2ad07d99675ad2d704ee 59812 science optional tabix_0.2.5-3_kfreebsd-amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_kfreebsd-amd64.deb
+tabix_0.2.5-3_kfreebsd-amd64.deb
────────────────────────────────
new debian package, version 2.0.
- size 58752 bytes: control archive= 997 bytes.
+ size 59812 bytes: control archive= 998 bytes.
791 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: kfreebsd-amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 111
+ Installed-Size: 113
Depends: libc0.1 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -439,26 +437,26 @@ tabix_0.2.5-2_kfreebsd-amd64.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/bin/
--rwxr-xr-x root/root 66400 2012-04-25 23:22 ./usr/bin/tabix
--rwxr-xr-x root/root 26344 2012-04-25 23:22 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/bin/
+-rwxr-xr-x root/root 68280 2012-05-12 07:34 ./usr/bin/tabix
+-rwxr-xr-x root/root 27088 2012-05-12 07:34 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 23:22 ./usr/share/man/man1/tabix.1.gz
-lrwxr-xr-x root/root 0 2012-04-25 23:22 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:34 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-05-12 07:34 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -472,41 +470,48 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ka-sbuild-1335396042-52154/build/buildd-tabix_0.2.5-2-kfreebsd-amd64-08Q5t6
+Purging /var/lib/schroot/mount/sid-ka-sbuild-1336807989-81882/build/buildd-tabix_0.2.5-3-kfreebsd-amd64-yFW6tz
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
- debhelper* file* gettext* gettext-base* groff-base* html2text*
- intltool-debian* libcroco3* libffi5* libglib2.0-0* libmagic1* libpipeline1*
- libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 17 to remove and 1 not upgraded.
-After this operation, 23.7 MB disk space will be freed.
-(Reading database ... 12803 files and directories currently installed.)
+ bsdmainutils* debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libasprintf0c2* libcroco3* libffi5* libgettextpo0*
+ libglib2.0-0* libmagic1* libpcre3* libpipeline1* libunistring0* libxml2*
+ man-db* po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 21 to remove and 0 not upgraded.
+After this operation, 24.7 MB disk space will be freed.
+(Reading database ... 12889 files and directories currently installed.)
Removing debhelper ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing bsdmainutils ...
+Purging configuration files for bsdmainutils ...
Removing file ...
Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
-Removing man-db ...
-Purging configuration files for man-db ...
Removing groff-base ...
Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
+Removing libasprintf0c2:kfreebsd-amd64 ...
Removing libcroco3:kfreebsd-amd64 ...
Purging configuration files for libcroco3:kfreebsd-amd64 ...
Removing libglib2.0-0:kfreebsd-amd64 ...
Purging configuration files for libglib2.0-0:kfreebsd-amd64 ...
Removing libffi5:kfreebsd-amd64 ...
Purging configuration files for libffi5:kfreebsd-amd64 ...
+Removing libgettextpo0:kfreebsd-amd64 ...
Removing libmagic1:kfreebsd-amd64 ...
Purging configuration files for libmagic1:kfreebsd-amd64 ...
+Removing libpcre3:kfreebsd-amd64 ...
+Purging configuration files for libpcre3:kfreebsd-amd64 ...
Removing libpipeline1:kfreebsd-amd64 ...
Purging configuration files for libpipeline1:kfreebsd-amd64 ...
Removing libunistring0:kfreebsd-amd64 ...
@@ -520,18 +525,18 @@ Removing zlib1g-dev:kfreebsd-amd64 ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-amd64
-Build-Space: 1702
-Build-Time: 13
+Build-Space: 1924
+Build-Time: 16
Distribution: sid
-Install-Time: 83
-Job: tabix_0.2.5-2
+Install-Time: 41
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 122
-Source-Version: 0.2.5-2
-Space: 1702
+Package-Time: 69
+Source-Version: 0.2.5-3
+Space: 1924
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2322
-Build needed 00:02:02, 1702k disc space
-Signature with key '94C0145B' requested:
+Finished at 20120512-0734
+Build needed 00:01:09, 1924k disc space
+Signature with key '4584BE29' requested:
diff --git a/kfreebsd-i386.log b/kfreebsd-i386.log
index d452cbf..1ab765b 100644
--- a/kfreebsd-i386.log
+++ b/kfreebsd-i386.log
@@ -1,59 +1,65 @@
-From buildd at finzi.debian.org Wed Apr 25 21:18:40 2012
-Return-path: <buildd at finzi.debian.org>
+From buildd at field.debian.org Sat May 12 07:34:01 2012
+Return-path: <buildd at field.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1SN9bk-0003ng-5Q
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:18:40 +0000
-Received: from finzi.debian.org ([206.12.19.111])
+ (Exim 4.72) (envelope-from <buildd at field.debian.org>)
+ id 1ST6q1-0002Tr-Fm
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:34:01 +0000
+Received: from field.debian.org ([194.177.211.210])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=finzi.debian.org, EMAIL=hostmaster at finzi.debian.org (verified)
+ CN=field.debian.org, EMAIL=hostmaster at field.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1SN9bi-0006NV-Mq; Wed, 25 Apr 2012 21:18:39 +0000
-Received: from buildd by finzi.debian.org with local (Exim 4.72)
- (envelope-from <buildd at finzi.debian.org>)
- id 1SN9bU-000D9l-Kn; Wed, 25 Apr 2012 21:18:24 +0000
-Message-Id: <E1SN9bU-000D9l-Kn at finzi.debian.org>
+ (Exim 4.72) (envelope-from <buildd at field.debian.org>)
+ id 1ST6q0-0006Kk-Kk; Sat, 12 May 2012 07:34:00 +0000
+Received: from buildd by field.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at field.debian.org>)
+ id 1ST6pz-000MRw-Pb; Sat, 12 May 2012 07:33:59 +0000
+Message-Id: <E1ST6pz-000MRw-Pb at field.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:18:24 +0000
-From: buildd on finzi <buildd at finzi.debian.org>
+Date: Sat, 12 May 2012 07:33:59 +0000
+From: buildd on field <buildd at field.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on kfreebsd-i386 (dist=sid)
-Key-Id: B3DA9773
+Subject: Log for successful build of tabix_0.2.5-3 on kfreebsd-i386 (dist=sid)
+Key-Id: B2824833
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on finzi.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on field.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (kfreebsd-i386) 25 Apr 2012 21:17 ║
+║ tabix 0.2.5-3 (kfreebsd-i386) 12 May 2012 07:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: kfreebsd-i386
-Hit http://mirror-ubc.debian.org sid InRelease
-Hit http://mirror-ubc.debian.org sid/main Sources
-Hit http://mirror-ubc.debian.org sid/contrib Sources
-Hit http://mirror-ubc.debian.org sid/main kfreebsd-i386 Packages
-Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-i386 Packages
-Hit http://mirror-ubc.debian.org sid/contrib Translation-en
-Hit http://mirror-ubc.debian.org sid/main Translation-en
+Hit http://ftp.gr.debian.org sid InRelease
+Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
+Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://ftp.gr.debian.org sid/main Translation-en/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Translation-en/DiffIndex
Hit http://incoming.debian.org Release.gpg
-Hit http://incoming.debian.org sid/main Sources
-Hit http://incoming.debian.org sid/contrib Sources
-Hit http://incoming.debian.org sid/main kfreebsd-i386 Packages
-Hit http://incoming.debian.org sid/contrib kfreebsd-i386 Packages
-Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
+Hit http://incoming.debian.org sid/main Sources/DiffIndex
+Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
+Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
+Hit http://incoming.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
+Hit http://incoming.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
+Hit http://incoming.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
+Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
+Hit http://incoming.debian.org sid/non-free Translation-en/DiffIndex
Hit http://incoming.debian.org Release
Hit http://incoming.debian.org Sources
Hit http://incoming.debian.org Packages
@@ -78,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (104 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 1s (56.3 kB/s)
Download complete and in download only mode
Check arch
@@ -102,12 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -119,19 +125,19 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
+coreutils: already installed (8.13-3.2)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.3)
e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-freebsd-utils: already installed (9.0+ds1-3)
-grep: already installed (2.11-3)
+freebsd-utils: already installed (9.0+ds1-4)
+grep: already installed (2.12-1)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
+ncurses-base: already installed (5.9-7)
+ncurses-bin: already installed (5.9-7)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -141,12 +147,12 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.7.0-6 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -154,42 +160,41 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ file gettext gettext-base groff-base html2text intltool-debian
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpipeline1 libunistring0 libxml2 man-db po-debconf
Suggested packages:
- wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
- libmail-box-perl
+ dh-make gettext-doc groff less www-browser libmail-box-perl
Recommended packages:
curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
+ debhelper file gettext gettext-base groff-base html2text intltool-debian
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-0 upgraded, 19 newly installed, 0 to remove and 2 not upgraded.
-Need to get 0 B/9854 kB of archives.
-After this operation, 24.0 MB of additional disk space will be used.
+0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/9485 kB of archives.
+After this operation, 23.2 MB of additional disk space will be used.
Selecting previously unselected package libpipeline1:kfreebsd-i386.
-(Reading database ... 11447 files and directories currently installed.)
+(Reading database ... 11613 files and directories currently installed.)
Unpacking libpipeline1:kfreebsd-i386 (from .../libpipeline1_1.2.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libasprintf0c2:kfreebsd-i386.
+Unpacking libasprintf0c2:kfreebsd-i386 (from .../libasprintf0c2_0.18.1.1-7_kfreebsd-i386.deb) ...
Selecting previously unselected package libmagic1:kfreebsd-i386.
Unpacking libmagic1:kfreebsd-i386 (from .../libmagic1_5.11-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libpcre3:kfreebsd-i386.
-Unpacking libpcre3:kfreebsd-i386 (from .../libpcre3_1%3a8.30-4_kfreebsd-i386.deb) ...
Selecting previously unselected package libxml2:kfreebsd-i386.
Unpacking libxml2:kfreebsd-i386 (from .../libxml2_2.7.8.dfsg-9_kfreebsd-i386.deb) ...
Selecting previously unselected package libffi5:kfreebsd-i386.
Unpacking libffi5:kfreebsd-i386 (from .../libffi5_3.0.10-3_kfreebsd-i386.deb) ...
Selecting previously unselected package libglib2.0-0:kfreebsd-i386.
-Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.32.0-4_kfreebsd-i386.deb) ...
+Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.32.2-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libcroco3:kfreebsd-i386.
Unpacking libcroco3:kfreebsd-i386 (from .../libcroco3_0.6.5-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libunistring0:kfreebsd-i386.
Unpacking libunistring0:kfreebsd-i386 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
-Selecting previously unselected package bsdmainutils.
-Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libgettextpo0:kfreebsd-i386.
+Unpacking libgettextpo0:kfreebsd-i386 (from .../libgettextpo0_0.18.1.1-7_kfreebsd-i386.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-i386.deb) ...
Selecting previously unselected package man-db.
@@ -197,51 +202,49 @@ Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-i386.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_5.11-1_kfreebsd-i386.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-i386.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_kfreebsd-i386.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-i386.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_kfreebsd-i386.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_kfreebsd-i386.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:kfreebsd-i386.
-Unpacking zlib1g-dev:kfreebsd-i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-i386.deb) ...
+Unpacking zlib1g-dev:kfreebsd-i386 (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_kfreebsd-i386.deb) ...
Setting up libpipeline1:kfreebsd-i386 (1.2.1-1) ...
+Setting up libasprintf0c2:kfreebsd-i386 (0.18.1.1-7) ...
Setting up libmagic1:kfreebsd-i386 (5.11-1) ...
-Setting up libpcre3:kfreebsd-i386 (1:8.30-4) ...
Setting up libxml2:kfreebsd-i386 (2.7.8.dfsg-9) ...
Setting up libffi5:kfreebsd-i386 (3.0.10-3) ...
-Setting up libglib2.0-0:kfreebsd-i386 (2.32.0-4) ...
+Setting up libglib2.0-0:kfreebsd-i386 (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:kfreebsd-i386 (0.6.5-1) ...
Setting up libunistring0:kfreebsd-i386 (0.9.3-5) ...
-Setting up bsdmainutils (9.0.1) ...
-update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
-update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up libgettextpo0:kfreebsd-i386 (0.18.1.1-7) ...
Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:kfreebsd-i386 (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:kfreebsd-i386 (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Checking correctness of dependencies...
-Kernel: GNU/kFreeBSD 8.1-1-686 kfreebsd-i386 (i686)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1
-Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-3 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-3 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc0.1_2.13-30 libc0.1-dev_2.13-30 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 libgssglue1_0.3-4 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libquadmath0_4.7.0-4 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: GNU/kFreeBSD 8.1-1-686-smp kfreebsd-i386 (i686)
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.7_4.7.0-8 gcc-4.7_4.7.0-8 kfreebsd-kernel-headers_0.79 libc0.1-dev_2.13-32 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8
+Package versions: apt_0.9.3 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.7.0-6 cpp-4.7_4.7.0-8 dash_0.5.7-3 debconf_1.5.43 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 freebsd-utils_9.0+ds1-4 g++_4:4.7.0-6 g++-4.7_4.7.0-8 gcc_4:4.7.0-6 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6-base_4.6.3-5 gcc-4.7_4.7.0-8 gcc-4.7-base_4.7.0-8 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.12-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-4 kfreebsd-kernel-headers_0.79 libacl1_2.2.51-7 libapt-pkg4.12_0.9.3 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-7 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc0.1_2.13-32 libc0.1-dev_2.13-32 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-2 libdpkg-perl_1.16.3 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-8 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1.1 libgomp1_4.7.0-8 libgssglue1_0.4-1 libjail1_9.0+ds1-2 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-7 libncursesw5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libprocps0_1:3.3.2-3 libquadmath0_4.7.0-8 libreadline6_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-8 libstdc++6-4.7-dev_4.7.0-8 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 login_1:4.1.5-1 lsb-base_4.1+Debian3 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 netbase_4.47 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 type-handling_0.2.23 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -252,14 +255,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -269,46 +273,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture kfreebsd-i386
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -348,9 +352,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -360,70 +364,59 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_kfreebsd-i386.deb'.
- dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../tabix_0.2.5-2_kfreebsd-i386.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_kfreebsd-i386.deb'.
+ dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org> >../tabix_0.2.5-3_kfreebsd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2118
+Build finished at 20120512-0733
-tabix_0.2.5-2_kfreebsd-i386.changes:
+tabix_0.2.5-3_kfreebsd-i386.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: kfreebsd-i386
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org>
+Maintainer: kfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 8d0fdde0a0ef77d883779e9992eca9dae7f2ff02 62634 tabix_0.2.5-2_kfreebsd-i386.deb
+ 5c8841729b232c2aff44b568a0a299df4f8cac2c 61254 tabix_0.2.5-3_kfreebsd-i386.deb
Checksums-Sha256:
- f5d30ecff5d6e46f855a0cc4939ea6c0772ca282c20c961badfa0edb992cadde 62634 tabix_0.2.5-2_kfreebsd-i386.deb
+ 5db56cbab63d0a5e2c79bc274b57bfaea6f4f123947e86e9e222ed9ab5c24c6e 61254 tabix_0.2.5-3_kfreebsd-i386.deb
Files:
- d68e87a7e460fb821385fa46a80fb23e 62634 science optional tabix_0.2.5-2_kfreebsd-i386.deb
+ d7b3dd754cab707f769b15f59fd20773 61254 science optional tabix_0.2.5-3_kfreebsd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_kfreebsd-i386.deb
+tabix_0.2.5-3_kfreebsd-i386.deb
───────────────────────────────
new debian package, version 2.0.
- size 62634 bytes: control archive= 999 bytes.
+ size 61254 bytes: control archive= 999 bytes.
790 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: kfreebsd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Installed-Size: 115
@@ -439,26 +432,26 @@ tabix_0.2.5-2_kfreebsd-i386.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/bin/
--rwxr-xr-x root/root 71712 2012-04-25 21:18 ./usr/bin/tabix
--rwxr-xr-x root/root 25852 2012-04-25 21:18 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/bin/
+-rwxr-xr-x root/root 71408 2012-05-12 07:33 ./usr/bin/tabix
+-rwxr-xr-x root/root 26192 2012-05-12 07:33 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/doc/tabix/examples/
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:18 ./usr/share/man/man1/tabix.1.gz
-lrwxr-xr-x root/root 0 2012-04-25 21:18 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:33 ./usr/share/man/man1/tabix.1.gz
+lrwxr-xr-x root/root 0 2012-05-12 07:33 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -472,45 +465,44 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ki-sbuild-1335388622-49480/build/buildd-tabix_0.2.5-2-kfreebsd-i386-i5dq9c
+Purging /var/lib/schroot/mount/sid-ki-sbuild-1336807871-85002/build/buildd-tabix_0.2.5-3-kfreebsd-i386-XdtEHC
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
- bsdmainutils* debhelper* file* gettext* gettext-base* groff-base* html2text*
- intltool-debian* libcroco3* libffi5* libglib2.0-0* libmagic1* libpcre3*
- libpipeline1* libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 19 to remove and 2 not upgraded.
-After this operation, 24.0 MB disk space will be freed.
-(Reading database ... 12852 files and directories currently installed.)
+ debhelper* file* gettext* gettext-base* groff-base* html2text*
+ intltool-debian* libasprintf0c2* libcroco3* libffi5* libgettextpo0*
+ libglib2.0-0* libmagic1* libpipeline1* libunistring0* libxml2* man-db*
+ po-debconf* zlib1g-dev*
+0 upgraded, 0 newly installed, 19 to remove and 0 not upgraded.
+After this operation, 23.2 MB disk space will be freed.
+(Reading database ... 12905 files and directories currently installed.)
Removing debhelper ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing bsdmainutils ...
-Purging configuration files for bsdmainutils ...
Removing file ...
Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
+Removing man-db ...
+Purging configuration files for man-db ...
Removing groff-base ...
Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
+Removing libasprintf0c2:kfreebsd-i386 ...
Removing libcroco3:kfreebsd-i386 ...
Purging configuration files for libcroco3:kfreebsd-i386 ...
Removing libglib2.0-0:kfreebsd-i386 ...
Purging configuration files for libglib2.0-0:kfreebsd-i386 ...
Removing libffi5:kfreebsd-i386 ...
Purging configuration files for libffi5:kfreebsd-i386 ...
+Removing libgettextpo0:kfreebsd-i386 ...
Removing libmagic1:kfreebsd-i386 ...
Purging configuration files for libmagic1:kfreebsd-i386 ...
-Removing libpcre3:kfreebsd-i386 ...
-Purging configuration files for libpcre3:kfreebsd-i386 ...
Removing libpipeline1:kfreebsd-i386 ...
Purging configuration files for libpipeline1:kfreebsd-i386 ...
Removing libunistring0:kfreebsd-i386 ...
@@ -524,18 +516,18 @@ Removing zlib1g-dev:kfreebsd-i386 ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-i386
-Build-Space: 1386
-Build-Time: 15
+Build-Space: 1518
+Build-Time: 14
Distribution: sid
-Install-Time: 37
-Job: tabix_0.2.5-2
+Install-Time: 83
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 64
-Source-Version: 0.2.5-2
-Space: 1386
+Package-Time: 114
+Source-Version: 0.2.5-3
+Space: 1518
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2118
-Build needed 00:01:04, 1386k disc space
-Signature with key 'B3DA9773' requested:
+Finished at 20120512-0733
+Build needed 00:01:54, 1518k disc space
+Signature with key 'B2824833' requested:
diff --git a/mips.log b/mips.log
index 73b4a12..a8a4d75 100644
--- a/mips.log
+++ b/mips.log
@@ -1,4 +1,4 @@
-From buildd at ball.debian.org Wed Apr 25 21:47:57 2012
+From buildd at ball.debian.org Sat May 12 09:02:14 2012
Return-path: <buildd at ball.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -6,23 +6,23 @@ Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ball.debian.org>)
- id 1SNA45-0008GF-0t
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:47:57 +0000
+ id 1ST8DO-0006NO-Id
+ for logs at buildd.debian.org; Sat, 12 May 2012 09:02:14 +0000
Received: from ball.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d09])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=ball.debian.org, EMAIL=hostmaster at ball.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at ball.debian.org>)
- id 1SNA44-000889-3S
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:47:56 +0000
+ id 1ST8DN-0001au-FB
+ for logs at buildd.debian.org; Sat, 12 May 2012 09:02:13 +0000
Received: from buildd by ball.debian.org with local (Exim 4.72)
(envelope-from <buildd at ball.debian.org>)
- id 1SNA43-00006a-I1; Wed, 25 Apr 2012 21:47:55 +0000
-Date: Wed, 25 Apr 2012 21:47:55 +0000
-Message-Id: <E1SNA43-00006a-I1 at ball.debian.org>
+ id 1ST8DM-0005ec-UI; Sat, 12 May 2012 09:02:13 +0000
+Date: Sat, 12 May 2012 09:02:12 +0000
+Message-Id: <E1ST8DM-0005ec-UI at ball.debian.org>
From: buildd on ball <buildd at ball.debian.org>
To: logs at buildd.debian.org,buildd-porters at ball.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on mips (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-3 on mips (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
@@ -30,40 +30,40 @@ Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ball.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (mips) 25 Apr 2012 21:42 ║
+║ tabix 0.2.5-3 (mips) 12 May 2012 08:56 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: mips
-Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
-Get:8 http://ftp.de.debian.org unstable/main mips Packages [5785 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib mips Packages [37.3 kB]
-Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
-Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:12 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main mips Packages [5785 kB]
-Get:16 http://incoming.debian.org unstable/contrib mips Packages [37.3 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6280 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [54.7 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [96.6 kB]
+Get:8 http://ftp.de.debian.org unstable/main mips Packages [5799 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:11 http://incoming.debian.org unstable/main mips Packages [5802 kB]
+Get:12 http://incoming.debian.org unstable/contrib mips Packages [37.5 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:21 http://incoming.debian.org Sources [31.5 kB]
-Get:22 http://incoming.debian.org Packages [498 kB]
+Get:13 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:14 http://incoming.debian.org Release [1601 B]
+Get:15 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://incoming.debian.org unstable/main Translation-en [3952 kB]
+Get:17 http://incoming.debian.org Sources [43.1 kB]
+Get:18 http://incoming.debian.org Packages [713 kB]
+Get:19 http://ftp.de.debian.org unstable/contrib mips Packages [37.5 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:20 http://ftp.de.debian.org unstable/main TranslationIndex [2295 B]
+Get:21 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.4 MB in 1min 31s (364 kB/s)
+Get:22 http://ftp.de.debian.org unstable/main Translation-en [3952 kB]
+Fetched 33.7 MB in 1min 26s (392 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (101 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/debian/ unstable/main tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/debian/ unstable/main tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/debian/ unstable/main tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (105 kB/s)
Download complete and in download only mode
Check arch
@@ -108,12 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 75 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 79 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 75 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 79 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -152,7 +152,7 @@ g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -161,8 +161,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf zlib1g
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -171,56 +171,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
The following packages will be upgraded:
zlib1g
-1 upgraded, 19 newly installed, 0 to remove and 74 not upgraded.
-Need to get 9891 kB of archives.
-After this operation, 26.7 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main zlib1g mips 1:1.2.6.dfsg-2 [85.3 kB]
+1 upgraded, 21 newly installed, 0 to remove and 78 not upgraded.
+Need to get 9964 kB of archives.
+After this operation, 26.8 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main zlib1g mips 1:1.2.7.dfsg-1 [86.6 kB]
Get:2 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mips 1.2.1-1 [36.7 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.11-1 [253 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 1:8.30-4 [244 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-9 [860 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libffi5 mips 3.0.10-3 [23.0 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.32.0-4 [1968 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.5-1 [140 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 9.0.1 [207 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-7 [1154 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.1-2 [1024 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main file mips 5.11-1 [53.2 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-5 [136 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-5 [2032 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.6.dfsg-2 [211 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 mips 0.18.1.1-7 [26.6 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.11-1 [253 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 1:8.30-5 [245 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-9 [860 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libffi5 mips 3.0.10-3 [23.0 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.32.2-1 [1988 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.5-1 [140 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libgettextpo0 mips 0.18.1.1-7 [139 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 9.0.1 [207 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-7 [1154 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.1-2 [1024 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main file mips 5.11-1 [53.2 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-7 [134 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-7 [1919 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.7.dfsg-1 [213 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9891 kB in 2s (4741 kB/s)
+Fetched 9964 kB in 3s (2675 kB/s)
(Reading database ... 10640 files and directories currently installed.)
-Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_mips.deb) ...
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.7.dfsg-1_mips.deb) ...
Unpacking replacement zlib1g ...
-Setting up zlib1g (1:1.2.6.dfsg-2) ...
+Setting up zlib1g (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1.
(Reading database ... 10640 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mips.deb) ...
+Selecting previously unselected package libasprintf0c2.
+Unpacking libasprintf0c2 (from .../libasprintf0c2_0.18.1.1-7_mips.deb) ...
Selecting previously unselected package libmagic1.
Unpacking libmagic1 (from .../libmagic1_5.11-1_mips.deb) ...
Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_mips.deb) ...
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-5_mips.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-9_mips.deb) ...
Selecting previously unselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.10-3_mips.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-4_mips.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.2-1_mips.deb) ...
Selecting previously unselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mips.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mips.deb) ...
+Selecting previously unselected package libgettextpo0.
+Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-7_mips.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mips.deb) ...
Selecting previously unselected package groff-base.
@@ -230,28 +237,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_mips.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_mips.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mips.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_mips.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mips.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_mips.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_mips.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mips.deb) ...
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_mips.deb) ...
Setting up libpipeline1 (1.2.1-1) ...
+Setting up libasprintf0c2 (0.18.1.1-7) ...
Setting up libmagic1 (5.11-1) ...
-Setting up libpcre3 (1:8.30-4) ...
+Setting up libpcre3 (1:8.30-5) ...
Setting up libxml2 (2.7.8.dfsg-9) ...
Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.32.0-4) ...
+Setting up libglib2.0-0 (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3 (0.6.5-1) ...
Setting up libunistring0 (0.9.3-5) ...
+Setting up libgettextpo0 (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -259,22 +268,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 78 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-sb1-bcm91250a mips (mips64)
Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-12 gcc-4.6_4.6.2-12 libc6-dev_2.13-24 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 linux-libc-dev_3.2.1-2
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-12 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.2-12 gcc_4:4.6.2-4 gcc-4.6_4.6.2-12 gcc-4.6-base_4.6.2-12 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-18 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-24 libc-dev-bin_2.13-24 libc6_2.13-24 libc6-dev_2.13-24 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-12 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-12 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libss2_1.42-1 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.1-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-24 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-6 perl-base_5.14.2-6 perl-modules_5.14.2-6 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-3 sysv-rc_2.88dsf-18 sysvinit_2.88dsf-18 sysvinit-utils_2.88dsf-18 tar_1.26-4 tzdata_2011n-2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-12 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.2-12 gcc_4:4.6.2-4 gcc-4.6_4.6.2-12 gcc-4.6-base_4.6.2-12 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-18 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-24 libc-dev-bin_2.13-24 libc6_2.13-24 libc6-dev_2.13-24 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-12 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-12 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libss2_1.42-1 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.1-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-24 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-6 perl-base_5.14.2-6 perl-modules_5.14.2-6 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-3 sysv-rc_2.88dsf-18 sysvinit_2.88dsf-18 sysvinit-utils_2.88dsf-18 tar_1.26-4 tzdata_2011n-2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -285,14 +294,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -302,46 +312,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mips
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
dh_clean
debian/rules build
dh build
dh_testdir
dh_auto_configure
dh_auto_build
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
dh_auto_test
fakeroot debian/rules binary-arch
dh binary-arch
@@ -381,9 +391,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mips-VnUYYZ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mips-IwEQVB/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -393,73 +403,62 @@ dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tab
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mips.deb'.
- dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../tabix_0.2.5-2_mips.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_mips.deb'.
+ dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../tabix_0.2.5-3_mips.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2147
+Build finished at 20120512-0902
-tabix_0.2.5-2_mips.changes:
+tabix_0.2.5-3_mips.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: mips
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
Maintainer: Debian Build Daemon <buildd_mips-ball at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- e622de78f815e260bf36563866ce218b0683ac68 65122 tabix_0.2.5-2_mips.deb
+ d36d564c3c21d5fa84c0901d86c8fa4f4bb775aa 66542 tabix_0.2.5-3_mips.deb
Checksums-Sha256:
- f6cb12c29c621c9110550f435a22e7b789bb96a308579d586663fa654de925a6 65122 tabix_0.2.5-2_mips.deb
+ 2935f05cb5c802220c916f23c94923b055e2fe14cc99a37e8415a281defd4cad 66542 tabix_0.2.5-3_mips.deb
Files:
- 9c5e859543d7d827d8d8ef5e44d2741d 65122 science optional tabix_0.2.5-2_mips.deb
+ 05bbf6116ba6da4d4330fe57c33f55bc 66542 science optional tabix_0.2.5-3_mips.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_mips.deb
+tabix_0.2.5-3_mips.deb
──────────────────────
new debian package, version 2.0.
- size 65122 bytes: control archive= 989 bytes.
+ size 66542 bytes: control archive= 993 bytes.
779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: mips
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 162
+ Installed-Size: 167
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -472,26 +471,26 @@ tabix_0.2.5-2_mips.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:47 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:47 ./usr/bin/
--rwxr-xr-x root/root 28556 2012-04-25 21:47 ./usr/bin/bgzip
--rwxr-xr-x root/root 81264 2012-04-25 21:47 ./usr/bin/tabix
-lrwxrwxrwx root/root 0 2012-04-25 21:47 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 09:01 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 09:01 ./usr/bin/
+-rwxr-xr-x root/root 31820 2012-05-12 09:01 ./usr/bin/bgzip
+-rwxr-xr-x root/root 82816 2012-05-12 09:01 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2012-05-12 09:01 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -505,7 +504,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mips-sbuild-3e08ff28-ab93-43c3-bc7b-4bd9e30612f4/build/buildd-tabix_0.2.5-2-mips-VnUYYZ
+Purging /var/lib/schroot/mount/sid-mips-sbuild-9e98c605-4f18-49ab-b710-27364a8c595c/build/buildd-tabix_0.2.5-3-mips-IwEQVB
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -513,84 +512,88 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mips
-Build-Space: 1604
+Build-Space: 1636
Build-Time: 63
Distribution: sid
-Install-Time: 102
-Job: tabix_0.2.5-2
+Install-Time: 114
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 336
-Source-Version: 0.2.5-2
-Space: 1604
+Package-Time: 347
+Source-Version: 0.2.5-3
+Space: 1636
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2147
-Build needed 00:05:36, 1604k disc space
+Finished at 20120512-0902
+Build needed 00:05:47, 1636k disc space
Signature with key 'E348DA45' requested:
-From buildd at eysler.debian.org Thu Apr 26 01:28:13 2012
-Return-path: <buildd at eysler.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at rem.debian.org Sat May 12 07:35:38 2012
+Return-path: <buildd at rem.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1SNDVF-0008Tj-Bt
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:13 +0000
-Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1ST6rZ-0002iW-Qt
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:38 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1SNDVD-0002lS-S8
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:11 +0000
-Received: from buildd by eysler.debian.org with local (Exim 4.72)
- (envelope-from <buildd at eysler.debian.org>) id 1SNDVC-0008I0-Pz
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:10 +0000
-Date: Thu, 26 Apr 2012 01:28:10 +0000
-Message-Id: <E1SNDVC-0008I0-Pz at eysler.debian.org>
-From: buildd on eysler <buildd at eysler.debian.org>
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1ST6rY-0006PI-Sr
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:37 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at rem.debian.org>) id 1ST6rW-0005ad-Ro
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:34 +0000
+Date: Sat, 12 May 2012 07:35:34 +0000
+Message-Id: <E1ST6rW-0005ad-Ro at rem.debian.org>
+From: buildd on rem <buildd at rem.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on mipsel (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-3 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (mipsel) 26 Apr 2012 01:22 ║
+║ tabix 0.2.5-3 (mipsel) 12 May 2012 07:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: mipsel
-Get:1 http://ftp.at.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.at.debian.org unstable/main Sources [6244 kB]
+Get:1 http://mirror.ayous.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://mirror.ayous.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org Release [1601 B]
-Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:7 http://ftp.at.debian.org unstable/contrib Sources [53.9 kB]
-Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.9 kB]
-Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5816 kB]
-Get:10 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
-Get:11 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:12 http://ftp.at.debian.org unstable/main Translation-en [3943 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main mipsel Packages [5816 kB]
-Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
-Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:18 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:19 http://incoming.debian.org Sources [26.7 kB]
-Get:20 http://incoming.debian.org Packages [398 kB]
+Get:4 http://mirror.ayous.org unstable/contrib Sources [54.7 kB]
+Get:5 http://mirror.ayous.org unstable/non-free Sources [96.6 kB]
+Get:6 http://mirror.ayous.org unstable/main mipsel Packages [5818 kB]
+Get:7 http://incoming.debian.org Release.gpg [836 B]
+Get:8 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [37.5 kB]
+Ign http://mirror.ayous.org unstable/contrib TranslationIndex
+Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2295 B]
+Get:11 http://mirror.ayous.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://mirror.ayous.org unstable/main Translation-en [3953 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:15 http://incoming.debian.org unstable/main mipsel Packages [5818 kB]
+Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.5 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:21 http://incoming.debian.org Sources [43.6 kB]
+Get:22 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.3 MB in 2min 0s (276 kB/s)
+Fetched 33.8 MB in 1min 1s (550 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -611,11 +614,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (85.6 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (104 kB/s)
Download complete and in download only mode
Check arch
@@ -635,12 +638,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 80 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 80 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -649,37 +652,37 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.7)
+base-files: already installed (6.5)
base-passwd: already installed (3.5.24)
-bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
-e2fsprogs: already installed (1.42.2-2)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3)
+dash: already installed (0.5.7-2)
+debianutils: already installed (4.2.1)
+diffutils: already installed (1:3.2-1)
+dpkg: already installed (1.16.1.2)
+e2fsprogs: already installed (1.42-1)
findutils: already installed (4.4.2-4)
-grep: already installed (2.11-3)
-gzip: already installed (1.4-5)
-hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
-perl-base: already installed (5.14.2-9)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-2)
+hostname: already installed (3.10)
+ncurses-base: already installed (5.9-4)
+ncurses-bin: already installed (5.9-4)
+perl-base: already installed (5.14.2-7)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22.1)
-sysvinit: already installed (2.88dsf-22.1)
+login: already installed (1:4.1.4.2+svn3283-3)
+sysvinit-utils: already installed (2.88dsf-22)
+sysvinit: already installed (2.88dsf-22)
tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-4)
-mount: already installed (2.20.1-4)
-util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+bsdutils: already installed (1:2.20.1-1.2)
+mount: already installed (2.20.1-1.2)
+util-linux: already installed (2.20.1-1.2)
+libc6-dev: already installed (2.13-26)
+gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -688,8 +691,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -698,49 +701,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 1 not upgraded.
-Need to get 9717 kB of archives.
-After this operation, 26.7 MB of additional disk space will be used.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
-Get:4 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
-Get:5 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
-Get:6 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-4 [1959 kB]
-Get:7 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
-Get:8 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
-Get:9 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
-Get:10 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
-Get:11 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
-Get:12 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
-Get:13 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
-Get:14 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:15 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
-Get:16 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 79 not upgraded.
+Need to get 9911 kB of archives.
+After this operation, 26.8 MB of additional disk space will be used.
+Get:1 http://mirror.ayous.org/debian/ unstable/main zlib1g mipsel 1:1.2.7.dfsg-1 [87.2 kB]
+Get:2 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:3 http://mirror.ayous.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.1.1-7 [26.4 kB]
+Get:4 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:5 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 1:8.30-5 [245 kB]
+Get:6 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
+Get:7 http://mirror.ayous.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:8 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.2-1 [1982 kB]
+Get:9 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:10 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:11 http://mirror.ayous.org/debian/ unstable/main libgettextpo0 mipsel 0.18.1.1-7 [139 kB]
+Get:12 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:13 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:14 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:15 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:16 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-7 [140 kB]
+Get:17 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:18 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-7 [1917 kB]
+Get:19 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://mirror.ayous.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.7.dfsg-1 [215 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9717 kB in 3s (2640 kB/s)
-Selecting previously unselected package libpipeline1:mipsel.
-(Reading database ... 10748 files and directories currently installed.)
-Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
-Selecting previously unselected package libmagic1:mipsel.
-Unpacking libmagic1:mipsel (from .../libmagic1_5.11-1_mipsel.deb) ...
-Selecting previously unselected package libpcre3:mipsel.
-Unpacking libpcre3:mipsel (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
-Selecting previously unselected package libxml2:mipsel.
-Unpacking libxml2:mipsel (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
-Selecting previously unselected package libffi5:mipsel.
-Unpacking libffi5:mipsel (from .../libffi5_3.0.10-3_mipsel.deb) ...
-Selecting previously unselected package libglib2.0-0:mipsel.
-Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.32.0-4_mipsel.deb) ...
-Selecting previously unselected package libcroco3:mipsel.
-Unpacking libcroco3:mipsel (from .../libcroco3_0.6.5-1_mipsel.deb) ...
-Selecting previously unselected package libunistring0:mipsel.
-Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Fetched 9911 kB in 1s (8589 kB/s)
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.7.dfsg-1_mipsel.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.7.dfsg-1) ...
+Selecting previously unselected package libpipeline1.
+(Reading database ... 10676 files and directories currently installed.)
+Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
+Selecting previously unselected package libasprintf0c2.
+Unpacking libasprintf0c2 (from .../libasprintf0c2_0.18.1.1-7_mipsel.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-5_mipsel.deb) ...
+Selecting previously unselected package libxml2.
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_mipsel.deb) ...
+Selecting previously unselected package libglib2.0-0.
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.2-1_mipsel.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0.
+Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package libgettextpo0.
+Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
Selecting previously unselected package groff-base.
@@ -750,28 +767,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_5.11-1_mipsel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_mipsel.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
-Selecting previously unselected package zlib1g-dev:mipsel.
-Unpacking zlib1g-dev:mipsel (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
-Setting up libpipeline1:mipsel (1.2.1-1) ...
-Setting up libmagic1:mipsel (5.11-1) ...
-Setting up libpcre3:mipsel (1:8.30-4) ...
-Setting up libxml2:mipsel (2.7.8.dfsg-9) ...
-Setting up libffi5:mipsel (3.0.10-3) ...
-Setting up libglib2.0-0:mipsel (2.32.0-4) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
+Selecting previously unselected package zlib1g-dev.
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_mipsel.deb) ...
+Setting up libpipeline1 (1.2.1-1) ...
+Setting up libasprintf0c2 (0.18.1.1-7) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-5) ...
+Setting up libxml2 (2.7.8.dfsg-9) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.32.2-1) ...
No schema files found: doing nothing.
-Setting up libcroco3:mipsel (0.6.5-1) ...
-Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up libcroco3 (0.6.5-1) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up libgettextpo0 (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -779,22 +798,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:mipsel (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 79 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
-Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-12 gcc-4.6_4.6.2-12 libc6-dev_2.13-26 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 linux-libc-dev_3.2.4-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-12 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.2-12 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.6_4.6.2-12 gcc-4.6-base_4.6.2-12 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-12 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.6.2-12 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libss2_1.42-1 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tzdata_2011n-2 ucf_3.0025+nmu2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -805,14 +824,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -822,47 +842,47 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_clean
- debian/rules build-arch
-dh build-arch
- dh_testdir -a
- dh_auto_configure -a
- dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+ debian/rules build
+dh build
+ dh_testdir
+ dh_auto_configure
+ dh_auto_build
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
- dh_auto_test -a
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+ dh_auto_test
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
@@ -901,85 +921,74 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
-dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../tabix_0.2.5-2_mipsel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-3_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120426-0128
+Build finished at 20120512-0735
-tabix_0.2.5-2_mipsel.changes:
+tabix_0.2.5-3_mipsel.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- ba1e99cd0335901e567459a3ef1589896d810e99 65378 tabix_0.2.5-2_mipsel.deb
+ 098dba7b3fdb19c314b8574872d545b070b25a2e 66850 tabix_0.2.5-3_mipsel.deb
Checksums-Sha256:
- e44c62ac4edd13391cb4553ba286657bb972fe940f3669111c73ff8d2ae04bc0 65378 tabix_0.2.5-2_mipsel.deb
+ 343715b81c09ac0be3a5f2a685d2e37d178fdca70970656ab78e9129ca82aba6 66850 tabix_0.2.5-3_mipsel.deb
Files:
- 3f8300c41bcf23824a870ec21b719b2a 65378 science optional tabix_0.2.5-2_mipsel.deb
+ d3b2f07bb304fd233aa2c7880c430443 66850 science optional tabix_0.2.5-3_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_mipsel.deb
+tabix_0.2.5-3_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 65378 bytes: control archive= 996 bytes.
+ size 66850 bytes: control archive= 995 bytes.
781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 162
+ Installed-Size: 167
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -992,26 +1001,26 @@ tabix_0.2.5-2_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:35 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-26 01:27 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/bin/
--rwxr-xr-x root/root 81248 2012-04-26 01:27 ./usr/bin/tabix
--rwxr-xr-x root/root 28540 2012-04-26 01:27 ./usr/bin/bgzip
-lrwxrwxrwx root/root 0 2012-04-26 01:27 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/bin/
+-rwxr-xr-x root/root 31820 2012-05-12 07:35 ./usr/bin/bgzip
+-rwxr-xr-x root/root 82816 2012-05-12 07:35 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2012-05-12 07:35 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1025,7 +1034,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-b6dc3c12-cc51-4c82-96d3-a7266257bcc8/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-09596c2d-93c7-4599-9150-0b703e00ac77/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1033,19 +1042,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 1604
-Build-Time: 74
+Build-Space: 1632
+Build-Time: 63
Distribution: sid
-Install-Time: 85
-Job: tabix_0.2.5-2
+Install-Time: 55
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 334
-Source-Version: 0.2.5-2
-Space: 1604
+Package-Time: 214
+Source-Version: 0.2.5-3
+Space: 1632
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120426-0128
-Build needed 00:05:34, 1604k disc space
-Signature with key '7550FB2E' requested:
+Finished at 20120512-0735
+Build needed 00:03:34, 1632k disc space
+Signature with key 'BDA682F0' requested:
diff --git a/mipsel.log b/mipsel.log
index 817819d..ebe6702 100644
--- a/mipsel.log
+++ b/mipsel.log
@@ -1,65 +1,69 @@
-From buildd at eysler.debian.org Thu Apr 26 01:28:13 2012
-Return-path: <buildd at eysler.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at rem.debian.org Sat May 12 07:35:38 2012
+Return-path: <buildd at rem.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1SNDVF-0008Tj-Bt
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:13 +0000
-Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1ST6rZ-0002iW-Qt
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:38 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1SNDVD-0002lS-S8
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:11 +0000
-Received: from buildd by eysler.debian.org with local (Exim 4.72)
- (envelope-from <buildd at eysler.debian.org>) id 1SNDVC-0008I0-Pz
- for logs at buildd.debian.org; Thu, 26 Apr 2012 01:28:10 +0000
-Date: Thu, 26 Apr 2012 01:28:10 +0000
-Message-Id: <E1SNDVC-0008I0-Pz at eysler.debian.org>
-From: buildd on eysler <buildd at eysler.debian.org>
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1ST6rY-0006PI-Sr
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:37 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at rem.debian.org>) id 1ST6rW-0005ad-Ro
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:35:34 +0000
+Date: Sat, 12 May 2012 07:35:34 +0000
+Message-Id: <E1ST6rW-0005ad-Ro at rem.debian.org>
+From: buildd on rem <buildd at rem.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on mipsel (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-3 on mipsel (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (mipsel) 26 Apr 2012 01:22 ║
+║ tabix 0.2.5-3 (mipsel) 12 May 2012 07:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: mipsel
-Get:1 http://ftp.at.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.at.debian.org unstable/main Sources [6244 kB]
+Get:1 http://mirror.ayous.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://mirror.ayous.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org Release [1601 B]
-Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:7 http://ftp.at.debian.org unstable/contrib Sources [53.9 kB]
-Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.9 kB]
-Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5816 kB]
-Get:10 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
-Get:11 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:12 http://ftp.at.debian.org unstable/main Translation-en [3943 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main mipsel Packages [5816 kB]
-Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
-Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:18 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:19 http://incoming.debian.org Sources [26.7 kB]
-Get:20 http://incoming.debian.org Packages [398 kB]
+Get:4 http://mirror.ayous.org unstable/contrib Sources [54.7 kB]
+Get:5 http://mirror.ayous.org unstable/non-free Sources [96.6 kB]
+Get:6 http://mirror.ayous.org unstable/main mipsel Packages [5818 kB]
+Get:7 http://incoming.debian.org Release.gpg [836 B]
+Get:8 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:9 http://mirror.ayous.org unstable/contrib mipsel Packages [37.5 kB]
+Ign http://mirror.ayous.org unstable/contrib TranslationIndex
+Get:10 http://mirror.ayous.org unstable/main TranslationIndex [2295 B]
+Get:11 http://mirror.ayous.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://mirror.ayous.org unstable/main Translation-en [3953 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:15 http://incoming.debian.org unstable/main mipsel Packages [5818 kB]
+Get:16 http://incoming.debian.org unstable/contrib mipsel Packages [37.5 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:21 http://incoming.debian.org Sources [43.6 kB]
+Get:22 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.3 MB in 2min 0s (276 kB/s)
+Fetched 33.8 MB in 1min 1s (550 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -80,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (85.6 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (104 kB/s)
Download complete and in download only mode
Check arch
@@ -104,12 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 80 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 80 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -118,37 +122,37 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-base-files: already installed (6.7)
+base-files: already installed (6.5)
base-passwd: already installed (3.5.24)
-bash: already installed (4.2-2)
-coreutils: already installed (8.13-3.1)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
-e2fsprogs: already installed (1.42.2-2)
+bash: already installed (4.2-1)
+coreutils: already installed (8.13-3)
+dash: already installed (0.5.7-2)
+debianutils: already installed (4.2.1)
+diffutils: already installed (1:3.2-1)
+dpkg: already installed (1.16.1.2)
+e2fsprogs: already installed (1.42-1)
findutils: already installed (4.4.2-4)
-grep: already installed (2.11-3)
-gzip: already installed (1.4-5)
-hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
-perl-base: already installed (5.14.2-9)
+grep: already installed (2.10-1)
+gzip: already installed (1.4-2)
+hostname: already installed (3.10)
+ncurses-base: already installed (5.9-4)
+ncurses-bin: already installed (5.9-4)
+perl-base: already installed (5.14.2-7)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22.1)
-sysvinit: already installed (2.88dsf-22.1)
+login: already installed (1:4.1.4.2+svn3283-3)
+sysvinit-utils: already installed (2.88dsf-22)
+sysvinit: already installed (2.88dsf-22)
tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-4)
-mount: already installed (2.20.1-4)
-util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+bsdutils: already installed (1:2.20.1-1.2)
+mount: already installed (2.20.1-1.2)
+util-linux: already installed (2.20.1-1.2)
+libc6-dev: already installed (2.13-26)
+gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.1)
+dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -157,8 +161,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -167,49 +171,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 1 not upgraded.
-Need to get 9717 kB of archives.
-After this operation, 26.7 MB of additional disk space will be used.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
-Get:4 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
-Get:5 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
-Get:6 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-4 [1959 kB]
-Get:7 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
-Get:8 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
-Get:9 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
-Get:10 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
-Get:11 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
-Get:12 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
-Get:13 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
-Get:14 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:15 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
-Get:16 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 79 not upgraded.
+Need to get 9911 kB of archives.
+After this operation, 26.8 MB of additional disk space will be used.
+Get:1 http://mirror.ayous.org/debian/ unstable/main zlib1g mipsel 1:1.2.7.dfsg-1 [87.2 kB]
+Get:2 http://mirror.ayous.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:3 http://mirror.ayous.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.1.1-7 [26.4 kB]
+Get:4 http://mirror.ayous.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:5 http://mirror.ayous.org/debian/ unstable/main libpcre3 mipsel 1:8.30-5 [245 kB]
+Get:6 http://mirror.ayous.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-9 [860 kB]
+Get:7 http://mirror.ayous.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:8 http://mirror.ayous.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.2-1 [1982 kB]
+Get:9 http://mirror.ayous.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:10 http://mirror.ayous.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:11 http://mirror.ayous.org/debian/ unstable/main libgettextpo0 mipsel 0.18.1.1-7 [139 kB]
+Get:12 http://mirror.ayous.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:13 http://mirror.ayous.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:14 http://mirror.ayous.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:15 http://mirror.ayous.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:16 http://mirror.ayous.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-7 [140 kB]
+Get:17 http://mirror.ayous.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:18 http://mirror.ayous.org/debian/ unstable/main gettext mipsel 0.18.1.1-7 [1917 kB]
+Get:19 http://mirror.ayous.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://mirror.ayous.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://mirror.ayous.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://mirror.ayous.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.7.dfsg-1 [215 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9717 kB in 3s (2640 kB/s)
-Selecting previously unselected package libpipeline1:mipsel.
-(Reading database ... 10748 files and directories currently installed.)
-Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
-Selecting previously unselected package libmagic1:mipsel.
-Unpacking libmagic1:mipsel (from .../libmagic1_5.11-1_mipsel.deb) ...
-Selecting previously unselected package libpcre3:mipsel.
-Unpacking libpcre3:mipsel (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
-Selecting previously unselected package libxml2:mipsel.
-Unpacking libxml2:mipsel (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
-Selecting previously unselected package libffi5:mipsel.
-Unpacking libffi5:mipsel (from .../libffi5_3.0.10-3_mipsel.deb) ...
-Selecting previously unselected package libglib2.0-0:mipsel.
-Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.32.0-4_mipsel.deb) ...
-Selecting previously unselected package libcroco3:mipsel.
-Unpacking libcroco3:mipsel (from .../libcroco3_0.6.5-1_mipsel.deb) ...
-Selecting previously unselected package libunistring0:mipsel.
-Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Fetched 9911 kB in 1s (8589 kB/s)
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.7.dfsg-1_mipsel.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.7.dfsg-1) ...
+Selecting previously unselected package libpipeline1.
+(Reading database ... 10676 files and directories currently installed.)
+Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
+Selecting previously unselected package libasprintf0c2.
+Unpacking libasprintf0c2 (from .../libasprintf0c2_0.18.1.1-7_mipsel.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-5_mipsel.deb) ...
+Selecting previously unselected package libxml2.
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-9_mipsel.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_mipsel.deb) ...
+Selecting previously unselected package libglib2.0-0.
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.2-1_mipsel.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0.
+Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package libgettextpo0.
+Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
Selecting previously unselected package groff-base.
@@ -219,28 +237,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_5.11-1_mipsel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_mipsel.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_mipsel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
-Selecting previously unselected package zlib1g-dev:mipsel.
-Unpacking zlib1g-dev:mipsel (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
-Setting up libpipeline1:mipsel (1.2.1-1) ...
-Setting up libmagic1:mipsel (5.11-1) ...
-Setting up libpcre3:mipsel (1:8.30-4) ...
-Setting up libxml2:mipsel (2.7.8.dfsg-9) ...
-Setting up libffi5:mipsel (3.0.10-3) ...
-Setting up libglib2.0-0:mipsel (2.32.0-4) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
+Selecting previously unselected package zlib1g-dev.
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_mipsel.deb) ...
+Setting up libpipeline1 (1.2.1-1) ...
+Setting up libasprintf0c2 (0.18.1.1-7) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-5) ...
+Setting up libxml2 (2.7.8.dfsg-9) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.32.2-1) ...
No schema files found: doing nothing.
-Setting up libcroco3:mipsel (0.6.5-1) ...
-Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up libcroco3 (0.6.5-1) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up libgettextpo0 (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -248,22 +268,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:mipsel (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 79 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
-Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-12 gcc-4.6_4.6.2-12 libc6-dev_2.13-26 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 linux-libc-dev_3.2.4-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-12 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.2-12 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.6_4.6.2-12 gcc-4.6-base_4.6.2-12 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-12 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.6.2-12 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libss2_1.42-1 libstdc++6_4.6.2-12 libstdc++6-4.6-dev_4.6.2-12 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tzdata_2011n-2 ucf_3.0025+nmu2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -274,14 +294,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -291,47 +312,47 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_clean
- debian/rules build-arch
-dh build-arch
- dh_testdir -a
- dh_auto_configure -a
- dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+ debian/rules build
+dh build
+ dh_testdir
+ dh_auto_configure
+ dh_auto_build
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
- dh_auto_test -a
+gcc -g -O2 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
+ dh_auto_test
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
@@ -370,85 +391,74 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
-dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabix/usr/bin/tabix was not linked against libm.so.6 (it uses none of the library's symbols).
+dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/tabix/usr/bin/tabix" were not uselessly linked against it (they use none of its symbols).
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../tabix_0.2.5-2_mipsel.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../tabix_0.2.5-3_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120426-0128
+Build finished at 20120512-0735
-tabix_0.2.5-2_mipsel.changes:
+tabix_0.2.5-3_mipsel.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: mipsel
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
- .
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- ba1e99cd0335901e567459a3ef1589896d810e99 65378 tabix_0.2.5-2_mipsel.deb
+ 098dba7b3fdb19c314b8574872d545b070b25a2e 66850 tabix_0.2.5-3_mipsel.deb
Checksums-Sha256:
- e44c62ac4edd13391cb4553ba286657bb972fe940f3669111c73ff8d2ae04bc0 65378 tabix_0.2.5-2_mipsel.deb
+ 343715b81c09ac0be3a5f2a685d2e37d178fdca70970656ab78e9129ca82aba6 66850 tabix_0.2.5-3_mipsel.deb
Files:
- 3f8300c41bcf23824a870ec21b719b2a 65378 science optional tabix_0.2.5-2_mipsel.deb
+ d3b2f07bb304fd233aa2c7880c430443 66850 science optional tabix_0.2.5-3_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_mipsel.deb
+tabix_0.2.5-3_mipsel.deb
────────────────────────
new debian package, version 2.0.
- size 65378 bytes: control archive= 996 bytes.
+ size 66850 bytes: control archive= 995 bytes.
781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 162
+ Installed-Size: 167
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -461,26 +471,26 @@ tabix_0.2.5-2_mipsel.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/
--rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:35 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-26 01:27 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-26 01:27 ./usr/bin/
--rwxr-xr-x root/root 81248 2012-04-26 01:27 ./usr/bin/tabix
--rwxr-xr-x root/root 28540 2012-04-26 01:27 ./usr/bin/bgzip
-lrwxrwxrwx root/root 0 2012-04-26 01:27 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:35 ./usr/bin/
+-rwxr-xr-x root/root 31820 2012-05-12 07:35 ./usr/bin/bgzip
+-rwxr-xr-x root/root 82816 2012-05-12 07:35 ./usr/bin/tabix
+lrwxrwxrwx root/root 0 2012-05-12 07:35 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -494,7 +504,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-b6dc3c12-cc51-4c82-96d3-a7266257bcc8/build/buildd-tabix_0.2.5-2-mipsel-jRA1jv
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-09596c2d-93c7-4599-9150-0b703e00ac77/build/buildd-tabix_0.2.5-3-mipsel-5mxuXR
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -502,19 +512,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 1604
-Build-Time: 74
+Build-Space: 1632
+Build-Time: 63
Distribution: sid
-Install-Time: 85
-Job: tabix_0.2.5-2
+Install-Time: 55
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 334
-Source-Version: 0.2.5-2
-Space: 1604
+Package-Time: 214
+Source-Version: 0.2.5-3
+Space: 1632
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120426-0128
-Build needed 00:05:34, 1604k disc space
-Signature with key '7550FB2E' requested:
+Finished at 20120512-0735
+Build needed 00:03:34, 1632k disc space
+Signature with key 'BDA682F0' requested:
diff --git a/powerpc.log b/powerpc.log
index 0e6ff6f..514bb01 100644
--- a/powerpc.log
+++ b/powerpc.log
@@ -1,71 +1,64 @@
-From buildd at poulenc.debian.org Wed Apr 25 21:17:57 2012
-Return-path: <buildd at poulenc.debian.org>
+From buildd at parry.debian.org Sat May 12 07:30:39 2012
+Return-path: <buildd at parry.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
- id 1SN9b3-0003jw-0Y
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:17:57 +0000
-Received: from poulenc.ynic.york.ac.uk ([144.32.168.77]
- helo=poulenc.debian.org)
+ (Exim 4.72) (envelope-from <buildd at parry.debian.org>)
+ id 1ST6ml-0001wG-Ht
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:30:39 +0000
+Received: from parry.debian.org ([140.211.15.153])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=poulenc.debian.org, EMAIL=hostmaster at poulenc.debian.org (verified)
+ CN=parry.debian.org, EMAIL=hostmaster at parry.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
- id 1SN9b1-0006Pv-Vg; Wed, 25 Apr 2012 21:17:56 +0000
-Received: from buildd by poulenc.debian.org with local (Exim 4.72)
- (envelope-from <buildd at poulenc.debian.org>)
- id 1SN9b1-0002tR-C2; Wed, 25 Apr 2012 21:17:55 +0000
-Message-Id: <E1SN9b1-0002tR-C2 at poulenc.debian.org>
-MIME-Version: 1.0
-Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:17:55 +0000
-From: buildd on poulenc <buildd at poulenc.debian.org>
+ (Exim 4.72) (envelope-from <buildd at parry.debian.org>)
+ id 1ST6mk-0004nm-0I; Sat, 12 May 2012 07:30:38 +0000
+Received: from buildd by parry.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at parry.debian.org>)
+ id 1ST6mh-0004sU-Ow; Sat, 12 May 2012 07:30:35 +0000
+Date: Sat, 12 May 2012 07:30:35 +0000
+Message-Id: <E1ST6mh-0004sU-Ow at parry.debian.org>
+From: buildd on parry <buildd at parry.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on powerpc (dist=sid)
-Key-Id: 050CE77C
+Subject: Log for successful build of tabix_0.2.5-3 on powerpc (dist=sid)
+Content-Type: text/plain; charset=UTF-8
+Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on poulenc.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on parry.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (powerpc) 25 Apr 2012 21:14 ║
+║ tabix 0.2.5-3 (powerpc) 12 May 2012 07:28 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: powerpc
-Get:1 http://ftp.uk.debian.org unstable InRelease [210 kB]
-Get:2 http://ftp.uk.debian.org unstable/main Sources [6244 kB]
-Get:3 http://incoming.debian.org unstable InRelease [210 kB]
+Get:1 http://debian.osuosl.org unstable InRelease [233 kB]
+Get:2 http://debian.osuosl.org unstable/main Sources [6282 kB]
+Get:3 http://incoming.debian.org unstable InRelease [233 kB]
+Get:4 http://debian.osuosl.org unstable/contrib Sources [54.7 kB]
+Get:5 http://debian.osuosl.org unstable/non-free Sources [96.6 kB]
+Get:6 http://debian.osuosl.org unstable/main powerpc Packages [5892 kB]
+Get:7 http://debian.osuosl.org unstable/contrib powerpc Packages [37.4 kB]
+Get:8 http://debian.osuosl.org unstable/contrib Translation-en [37.0 kB]
+Get:9 http://debian.osuosl.org unstable/main Translation-en [3953 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:6 http://ftp.uk.debian.org unstable/contrib Sources [53.9 kB]
-Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
-Get:8 http://ftp.uk.debian.org unstable/main powerpc Packages [5888 kB]
-Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [36.9 kB]
-Ign http://ftp.uk.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.uk.debian.org unstable/main TranslationIndex [2223 B]
-Get:11 http://ftp.uk.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:12 http://ftp.uk.debian.org unstable/main Translation-en [3943 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main powerpc Packages [5888 kB]
-Get:16 http://incoming.debian.org unstable/contrib powerpc Packages [36.9 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:10 http://incoming.debian.org Release.gpg [836 B]
+Get:11 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:12 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:13 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:14 http://incoming.debian.org unstable/main powerpc Packages [5892 kB]
+Get:15 http://incoming.debian.org unstable/contrib powerpc Packages [37.4 kB]
+Get:16 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:17 http://incoming.debian.org unstable/main Translation-en [3953 kB]
Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:21 http://incoming.debian.org Sources [33.5 kB]
-Get:22 http://incoming.debian.org Packages [517 kB]
+Get:19 http://incoming.debian.org Sources [43.6 kB]
+Get:20 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.6 MB in 2min 4s (270 kB/s)
+Fetched 34.0 MB in 12s (2747 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +79,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (60.6 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (123 kB/s)
Download complete and in download only mode
Check arch
@@ -104,18 +97,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 47 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 47 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -126,19 +119,19 @@ Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diff
Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
-bash: already installed (4.2-1)
+bash: already installed (4.2-2)
coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.2)
-e2fsprogs: already installed (1.42.2-1)
+dpkg: already installed (1.16.3)
+e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-grep: already installed (2.10-1)
+grep: already installed (2.11-3)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-5)
-ncurses-bin: already installed (5.9-5)
+ncurses-base: already installed (5.9-6)
+ncurses-bin: already installed (5.9-6)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -148,13 +141,13 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-30)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -163,8 +156,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -173,49 +166,59 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 37 not upgraded.
-Need to get 9913 kB of archives.
-After this operation, 26.3 MB of additional disk space will be used.
-Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.1-1 [38.5 kB]
-Get:2 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 5.11-1 [257 kB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 powerpc 1:8.30-4 [241 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-9 [843 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libffi5 powerpc 3.0.10-3 [25.5 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.32.0-4 [2019 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.5-1 [143 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils powerpc 9.0.1 [208 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main groff-base powerpc 1.21-7 [1179 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.1-2 [1054 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 5.11-1 [53.1 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-5 [132 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-5 [2036 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.6.dfsg-2 [209 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 20 newly installed, 0 to remove and 46 not upgraded.
+Need to get 9826 kB of archives.
+After this operation, 26.0 MB of additional disk space will be used.
+Get:1 http://debian.osuosl.org/debian/ unstable/main zlib1g powerpc 1:1.2.7.dfsg-1 [86.2 kB]
+Get:2 http://debian.osuosl.org/debian/ unstable/main libpipeline1 powerpc 1.2.1-1 [38.5 kB]
+Get:3 http://debian.osuosl.org/debian/ unstable/main libasprintf0c2 powerpc 0.18.1.1-7 [26.8 kB]
+Get:4 http://debian.osuosl.org/debian/ unstable/main libmagic1 powerpc 5.11-1 [257 kB]
+Get:5 http://debian.osuosl.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-9 [843 kB]
+Get:6 http://debian.osuosl.org/debian/ unstable/main libffi5 powerpc 3.0.10-3 [25.5 kB]
+Get:7 http://debian.osuosl.org/debian/ unstable/main libglib2.0-0 powerpc 2.32.2-1 [2040 kB]
+Get:8 http://debian.osuosl.org/debian/ unstable/main libcroco3 powerpc 0.6.5-1 [143 kB]
+Get:9 http://debian.osuosl.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
+Get:10 http://debian.osuosl.org/debian/ unstable/main libgettextpo0 powerpc 0.18.1.1-7 [137 kB]
+Get:11 http://debian.osuosl.org/debian/ unstable/main bsdmainutils powerpc 9.0.1 [208 kB]
+Get:12 http://debian.osuosl.org/debian/ unstable/main groff-base powerpc 1.21-7 [1179 kB]
+Get:13 http://debian.osuosl.org/debian/ unstable/main man-db powerpc 2.6.1-2 [1054 kB]
+Get:14 http://debian.osuosl.org/debian/ unstable/main file powerpc 5.11-1 [53.1 kB]
+Get:15 http://debian.osuosl.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-7 [130 kB]
+Get:16 http://debian.osuosl.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
+Get:17 http://debian.osuosl.org/debian/ unstable/main gettext powerpc 0.18.1.1-7 [1920 kB]
+Get:18 http://debian.osuosl.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:19 http://debian.osuosl.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:20 http://debian.osuosl.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:21 http://debian.osuosl.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.7.dfsg-1 [212 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9913 kB in 4s (2202 kB/s)
+Fetched 9826 kB in 1s (8533 kB/s)
+(Reading database ... 10913 files and directories currently installed.)
+Preparing to replace zlib1g:powerpc 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_powerpc.deb) ...
+Unpacking replacement zlib1g:powerpc ...
+Setting up zlib1g:powerpc (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1:powerpc.
-(Reading database ... 10787 files and directories currently installed.)
+(Reading database ... 10913 files and directories currently installed.)
Unpacking libpipeline1:powerpc (from .../libpipeline1_1.2.1-1_powerpc.deb) ...
+Selecting previously unselected package libasprintf0c2:powerpc.
+Unpacking libasprintf0c2:powerpc (from .../libasprintf0c2_0.18.1.1-7_powerpc.deb) ...
Selecting previously unselected package libmagic1:powerpc.
Unpacking libmagic1:powerpc (from .../libmagic1_5.11-1_powerpc.deb) ...
-Selecting previously unselected package libpcre3:powerpc.
-Unpacking libpcre3:powerpc (from .../libpcre3_1%3a8.30-4_powerpc.deb) ...
Selecting previously unselected package libxml2:powerpc.
Unpacking libxml2:powerpc (from .../libxml2_2.7.8.dfsg-9_powerpc.deb) ...
Selecting previously unselected package libffi5:powerpc.
Unpacking libffi5:powerpc (from .../libffi5_3.0.10-3_powerpc.deb) ...
Selecting previously unselected package libglib2.0-0:powerpc.
-Unpacking libglib2.0-0:powerpc (from .../libglib2.0-0_2.32.0-4_powerpc.deb) ...
+Unpacking libglib2.0-0:powerpc (from .../libglib2.0-0_2.32.2-1_powerpc.deb) ...
Selecting previously unselected package libcroco3:powerpc.
Unpacking libcroco3:powerpc (from .../libcroco3_0.6.5-1_powerpc.deb) ...
Selecting previously unselected package libunistring0:powerpc.
Unpacking libunistring0:powerpc (from .../libunistring0_0.9.3-5_powerpc.deb) ...
+Selecting previously unselected package libgettextpo0:powerpc.
+Unpacking libgettextpo0:powerpc (from .../libgettextpo0_0.18.1.1-7_powerpc.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_powerpc.deb) ...
Selecting previously unselected package groff-base.
@@ -225,28 +228,29 @@ Unpacking man-db (from .../man-db_2.6.1-2_powerpc.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_5.11-1_powerpc.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_powerpc.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_powerpc.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_powerpc.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_powerpc.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_powerpc.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:powerpc.
-Unpacking zlib1g-dev:powerpc (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_powerpc.deb) ...
+Unpacking zlib1g-dev:powerpc (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_powerpc.deb) ...
Setting up libpipeline1:powerpc (1.2.1-1) ...
+Setting up libasprintf0c2:powerpc (0.18.1.1-7) ...
Setting up libmagic1:powerpc (5.11-1) ...
-Setting up libpcre3:powerpc (1:8.30-4) ...
Setting up libxml2:powerpc (2.7.8.dfsg-9) ...
Setting up libffi5:powerpc (3.0.10-3) ...
-Setting up libglib2.0-0:powerpc (2.32.0-4) ...
+Setting up libglib2.0-0:powerpc (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:powerpc (0.6.5-1) ...
Setting up libunistring0:powerpc (0.9.3-5) ...
+Setting up libgettextpo0:powerpc (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -254,22 +258,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:powerpc (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:powerpc (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 46 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-powerpc64 powerpc (ppc64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6-dev_2.13-30 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.15-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-4 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6_2.13-30 libc6-dev_2.13-30 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.3 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-4 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-4 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-9 libss2_1.42.2-2 libstdc++6_4.7.0-4 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -280,14 +284,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -297,46 +302,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture powerpc
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -376,9 +381,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-powerpc-fWugLi/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -388,73 +393,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_powerpc.deb'.
- dpkg-genchanges -B -mpowerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org> >../tabix_0.2.5-2_powerpc.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_powerpc.deb'.
+ dpkg-genchanges -B -mpowerpc Build Daemon (parry) <buildd_powerpc-parry at buildd.debian.org> >../tabix_0.2.5-3_powerpc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2117
+Build finished at 20120512-0730
-tabix_0.2.5-2_powerpc.changes:
+tabix_0.2.5-3_powerpc.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: powerpc
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: powerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org>
+Maintainer: powerpc Build Daemon (parry) <buildd_powerpc-parry at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 33dfd09133acf9bb5fa0433d5789c328dad23cbf 62134 tabix_0.2.5-2_powerpc.deb
+ 25dbb1e4e8c265ad935f0234de976792570e82e0 62180 tabix_0.2.5-3_powerpc.deb
Checksums-Sha256:
- 375c4eadc3d8bb271e2ea86f379f1f5de3621eee783cce55a98c7433c6e331f3 62134 tabix_0.2.5-2_powerpc.deb
+ d6cb6612d84f496e2b1fb10cf07b0a8c34369f81837abcb0b6caec96309dd688 62180 tabix_0.2.5-3_powerpc.deb
Files:
- 9ce90843376bde0b9fb27c02fb5b206d 62134 science optional tabix_0.2.5-2_powerpc.deb
+ 6e251943ae547150c0d0f817864e697a 62180 science optional tabix_0.2.5-3_powerpc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_powerpc.deb
+tabix_0.2.5-3_powerpc.deb
─────────────────────────
new debian package, version 2.0.
- size 62134 bytes: control archive= 997 bytes.
+ size 62180 bytes: control archive= 993 bytes.
782 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: powerpc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 148
+ Installed-Size: 151
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -467,26 +461,26 @@ tabix_0.2.5-2_powerpc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:17 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/bin/
+-rwxr-xr-x root/root 71480 2012-05-12 07:29 ./usr/bin/tabix
+-rwxr-xr-x root/root 26264 2012-05-12 07:29 ./usr/bin/bgzip
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:29 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+drwxr-xr-x root/root 0 2012-05-12 07:29 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-drwxr-xr-x root/root 0 2012-04-25 21:17 ./usr/bin/
--rwxr-xr-x root/root 69688 2012-04-25 21:17 ./usr/bin/tabix
--rwxr-xr-x root/root 25408 2012-04-25 21:17 ./usr/bin/bgzip
-lrwxrwxrwx root/root 0 2012-04-25 21:17 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+lrwxrwxrwx root/root 0 2012-05-12 07:29 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -500,7 +494,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-powerpc-sbuild-bb24d36f-8b2e-4c06-acd1-ad358f427e9e/build/buildd-tabix_0.2.5-2-powerpc-AKkQzs
+Purging /var/lib/schroot/mount/sid-powerpc-sbuild-4ccbfdca-2324-46af-913c-449146180e6a/build/buildd-tabix_0.2.5-3-powerpc-fWugLi
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -508,18 +502,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: powerpc
-Build-Space: 1568
-Build-Time: 19
+Build-Space: 1564
+Build-Time: 10
Distribution: sid
-Install-Time: 43
-Job: tabix_0.2.5-2
+Install-Time: 61
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 202
-Source-Version: 0.2.5-2
-Space: 1568
+Package-Time: 94
+Source-Version: 0.2.5-3
+Space: 1564
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2117
-Build needed 00:03:22, 1568k disc space
-Signature with key '050CE77C' requested:
+Finished at 20120512-0730
+Build needed 00:01:34, 1564k disc space
+Signature with key '9811BFE6' requested:
+
diff --git a/s390.log b/s390.log
index 9112bbf..a521b4d 100644
--- a/s390.log
+++ b/s390.log
@@ -1,71 +1,71 @@
-From buildd at zandonai.debian.org Wed Apr 25 21:26:54 2012
+From buildd at zandonai.debian.org Sat May 12 07:32:29 2012
Return-path: <buildd at zandonai.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SN9jh-0004yJ-Sk
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:26:54 +0000
+ id 1ST6oX-0002IV-KD
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:29 +0000
Received: from zandonai.debian.org ([80.245.147.46])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SN9jg-0006wO-Tg; Wed, 25 Apr 2012 21:26:53 +0000
+ id 1ST6oW-00067y-Nr; Sat, 12 May 2012 07:32:28 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1SN9jg-0007qM-HA; Wed, 25 Apr 2012 21:26:52 +0000
-Message-Id: <E1SN9jg-0007qM-HA at zandonai.debian.org>
+ id 1ST6oV-0006Oh-K5; Sat, 12 May 2012 07:32:27 +0000
+Message-Id: <E1ST6oV-0006Oh-K5 at zandonai.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:26:52 +0000
+Date: Sat, 12 May 2012 07:32:27 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on s390 (dist=sid)
+Subject: Log for successful build of tabix_0.2.5-3 on s390 (dist=sid)
Key-Id: E7C67939
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (s390) 25 Apr 2012 21:26 ║
+║ tabix 0.2.5-3 (s390) 12 May 2012 07:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: s390
-Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
-Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
-Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
-Get:6 http://ftp.de.debian.org unstable/main s390 Packages [5801 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [233 kB]
+Get:2 http://ftp.de.debian.org unstable/main Sources [6282 kB]
+Get:3 http://incoming.debian.org unstable InRelease [233 kB]
Ign http://incoming.debian.org InRelease
-Get:7 http://incoming.debian.org Release.gpg [836 B]
-Get:8 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [36.7 kB]
-Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
-Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:12 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main s390 Packages [5802 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390 Packages [36.7 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [54.7 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [96.6 kB]
+Get:8 http://ftp.de.debian.org unstable/main s390 Packages [5802 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:11 http://incoming.debian.org unstable/main s390 Packages [5802 kB]
+Get:12 http://incoming.debian.org unstable/contrib s390 Packages [37.1 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:21 http://incoming.debian.org Sources [31.9 kB]
-Get:22 http://incoming.debian.org Packages [519 kB]
+Get:13 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:14 http://incoming.debian.org Release [1601 B]
+Get:15 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://ftp.de.debian.org unstable/contrib s390 Packages [37.1 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:17 http://ftp.de.debian.org unstable/main TranslationIndex [2295 B]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:19 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://ftp.de.debian.org unstable/main Translation-en [3953 kB]
+Get:21 http://incoming.debian.org Sources [43.6 kB]
+Get:22 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.4 MB in 11s (2839 kB/s)
+Fetched 33.8 MB in 12s (2604 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +86,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (93.7 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (93.8 kB/s)
Download complete and in download only mode
Check arch
@@ -110,12 +110,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 58 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 58 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -154,7 +154,7 @@ g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -163,8 +163,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -173,49 +173,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
-Need to get 10.1 MB of archives.
-After this operation, 26.5 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.1-1 [40.0 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.11-1 [260 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 1:8.30-4 [247 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-9 [882 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390 3.0.10-3 [25.3 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.32.0-4 [2099 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.5-1 [150 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 9.0.1 [213 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-7 [1145 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.1-2 [1068 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390 5.11-1 [53.7 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-5 [143 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-5 [2073 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.6.dfsg-2 [213 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 57 not upgraded.
+Need to get 10.3 MB of archives.
+After this operation, 26.7 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main zlib1g s390 1:1.2.7.dfsg-1 [91.0 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.1-1 [40.0 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 s390 0.18.1.1-7 [26.4 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.11-1 [260 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 1:8.30-5 [248 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-9 [882 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390 3.0.10-3 [25.3 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.32.2-1 [2121 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.5-1 [150 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libgettextpo0 s390 0.18.1.1-7 [146 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 9.0.1 [213 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-7 [1145 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.1-2 [1068 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main file s390 5.11-1 [53.7 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-7 [141 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-7 [1950 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.7.dfsg-1 [215 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 10.1 MB in 0s (13.8 MB/s)
+Fetched 10.3 MB in 3s (3022 kB/s)
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace zlib1g:s390 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_s390.deb) ...
+Unpacking replacement zlib1g:s390 ...
+Setting up zlib1g:s390 (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1:s390.
(Reading database ... 10731 files and directories currently installed.)
Unpacking libpipeline1:s390 (from .../libpipeline1_1.2.1-1_s390.deb) ...
+Selecting previously unselected package libasprintf0c2:s390.
+Unpacking libasprintf0c2:s390 (from .../libasprintf0c2_0.18.1.1-7_s390.deb) ...
Selecting previously unselected package libmagic1:s390.
Unpacking libmagic1:s390 (from .../libmagic1_5.11-1_s390.deb) ...
Selecting previously unselected package libpcre3:s390.
-Unpacking libpcre3:s390 (from .../libpcre3_1%3a8.30-4_s390.deb) ...
+Unpacking libpcre3:s390 (from .../libpcre3_1%3a8.30-5_s390.deb) ...
Selecting previously unselected package libxml2:s390.
Unpacking libxml2:s390 (from .../libxml2_2.7.8.dfsg-9_s390.deb) ...
Selecting previously unselected package libffi5:s390.
Unpacking libffi5:s390 (from .../libffi5_3.0.10-3_s390.deb) ...
Selecting previously unselected package libglib2.0-0:s390.
-Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.32.0-4_s390.deb) ...
+Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.32.2-1_s390.deb) ...
Selecting previously unselected package libcroco3:s390.
Unpacking libcroco3:s390 (from .../libcroco3_0.6.5-1_s390.deb) ...
Selecting previously unselected package libunistring0:s390.
Unpacking libunistring0:s390 (from .../libunistring0_0.9.3-5_s390.deb) ...
+Selecting previously unselected package libgettextpo0:s390.
+Unpacking libgettextpo0:s390 (from .../libgettextpo0_0.18.1.1-7_s390.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390.deb) ...
Selecting previously unselected package groff-base.
@@ -225,28 +239,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_s390.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_s390.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_s390.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_s390.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_s390.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_s390.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_s390.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:s390.
-Unpacking zlib1g-dev:s390 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390.deb) ...
+Unpacking zlib1g-dev:s390 (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_s390.deb) ...
Setting up libpipeline1:s390 (1.2.1-1) ...
+Setting up libasprintf0c2:s390 (0.18.1.1-7) ...
Setting up libmagic1:s390 (5.11-1) ...
-Setting up libpcre3:s390 (1:8.30-4) ...
+Setting up libpcre3:s390 (1:8.30-5) ...
Setting up libxml2:s390 (2.7.8.dfsg-9) ...
Setting up libffi5:s390 (3.0.10-3) ...
-Setting up libglib2.0-0:s390 (2.32.0-4) ...
+Setting up libglib2.0-0:s390 (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:s390 (0.6.5-1) ...
Setting up libunistring0:s390 (0.9.3-5) ...
+Setting up libgettextpo0:s390 (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -254,22 +270,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:s390 (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:s390 (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 57 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390 (s390x)
Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -280,14 +296,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -297,46 +314,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -376,9 +393,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390-wDimVL/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390-BCca0L/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -388,73 +405,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_s390.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-3_s390.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2126
+Build finished at 20120512-0732
-tabix_0.2.5-2_s390.changes:
+tabix_0.2.5-3_s390.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: s390
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- ba8aea97668c6ea38112f5048047ff02ce1cf461 60860 tabix_0.2.5-2_s390.deb
+ c8f1e7756da3f7d44bd32760b52e0b197ce98b4d 67430 tabix_0.2.5-3_s390.deb
Checksums-Sha256:
- 0dd175829f5825c359c529c7a0529ae5d3f9ac7240b7c4a6486c23c608dd435a 60860 tabix_0.2.5-2_s390.deb
+ e1c4b3394e05d4c367fc05fc37db958cd57278e568dec4d850fbf29356aa92ec 67430 tabix_0.2.5-3_s390.deb
Files:
- 9922425058a03f22cead7f27d2b9054b 60860 science optional tabix_0.2.5-2_s390.deb
+ e2809a97ce9d4fd7aa2cdabd8051daf9 67430 science optional tabix_0.2.5-3_s390.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_s390.deb
+tabix_0.2.5-3_s390.deb
──────────────────────
new debian package, version 2.0.
- size 60860 bytes: control archive= 992 bytes.
+ size 67430 bytes: control archive= 990 bytes.
779 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: s390
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 159
+ Installed-Size: 162
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -467,26 +473,26 @@ tabix_0.2.5-2_s390.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/bin/
--rwxr-xr-x root/root 28512 2012-04-25 21:26 ./usr/bin/bgzip
--rwxr-xr-x root/root 78404 2012-04-25 21:26 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:26 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/bin/
+-rwxr-xr-x root/root 30244 2012-05-12 07:32 ./usr/bin/bgzip
+-rwxr-xr-x root/root 79572 2012-05-12 07:32 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:32 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2012-04-25 21:26 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2012-04-25 21:26 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+lrwxrwxrwx root/root 0 2012-05-12 07:32 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -500,7 +506,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390-sbuild-ded84564-6b94-4973-9305-78289452d843/build/buildd-tabix_0.2.5-2-s390-wDimVL
+Purging /var/lib/schroot/mount/sid-s390-sbuild-2ba4606b-e935-4db9-a090-af944e27e31b/build/buildd-tabix_0.2.5-3-s390-BCca0L
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -508,89 +514,88 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390
-Build-Space: 1696
+Build-Space: 1724
Build-Time: 9
Distribution: sid
-Install-Time: 7
-Job: tabix_0.2.5-2
+Install-Time: 9
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 40
-Source-Version: 0.2.5-2
-Space: 1696
+Package-Time: 44
+Source-Version: 0.2.5-3
+Space: 1724
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2126
-Build needed 00:00:40, 1696k disc space
+Finished at 20120512-0732
+Build needed 00:00:44, 1724k disc space
Signature with key 'E7C67939' requested:
-From buildd at zandonai.debian.org Wed Apr 25 21:49:51 2012
-Return-path: <buildd at zandonai.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at zappa.debian.org Sat May 12 07:32:00 2012
+Return-path: <buildd at zappa.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5v-0008Pp-Ir
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:49:51 +0000
-Received: from zandonai.debian.org ([80.245.147.46])
+ (Exim 4.72) (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o4-0002ES-8M
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:00 +0000
+Received: from [148.100.96.103] (helo=zappa.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=zandonai.debian.org,
- EMAIL=hostmaster at zandonai.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5u-00086r-HC; Wed, 25 Apr 2012 21:49:50 +0000
-Received: from buildd by zandonai.debian.org with local (Exim 4.72)
- (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5u-0001qu-3D; Wed, 25 Apr 2012 21:49:50 +0000
-Message-Id: <E1SNA5u-0001qu-3D at zandonai.debian.org>
+ CN=zappa.debian.org, EMAIL=hostmaster at zappa.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o3-0004xE-32; Sat, 12 May 2012 07:31:59 +0000
+Received: from buildd by zappa.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o1-00055e-1w; Sat, 12 May 2012 07:31:57 +0000
+Message-Id: <E1ST6o1-00055e-1w at zappa.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:49:50 +0000
-From: buildd on zandonai <buildd at zandonai.debian.org>
+Date: Sat, 12 May 2012 07:31:56 +0000
+From: buildd on zappa <buildd at zappa.debian.org>
To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on s390x (dist=sid)
-Key-Id: BE1C5586
+Subject: Log for successful build of tabix_0.2.5-3 on s390x (dist=sid)
+Key-Id: D1955623
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zappa.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (s390x) 25 Apr 2012 21:49 ║
+║ tabix 0.2.5-3 (s390x) 12 May 2012 07:28 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
-Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
-Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
-Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5700 kB]
+Get:1 http://ftp.us.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.us.debian.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
-Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
-Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:8 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
-Get:9 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:10 http://incoming.debian.org Release.gpg [836 B]
-Get:11 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
-Get:12 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [5701 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:7 http://ftp.us.debian.org unstable/contrib Sources [54.7 kB]
+Get:8 http://ftp.us.debian.org unstable/non-free Sources [96.6 kB]
+Get:9 http://ftp.us.debian.org unstable/main s390x Packages [5725 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:12 http://incoming.debian.org unstable/main s390x Packages [5725 kB]
+Get:13 http://ftp.us.debian.org unstable/contrib s390x Packages [36.6 kB]
+Ign http://ftp.us.debian.org unstable/contrib TranslationIndex
+Get:14 http://ftp.us.debian.org unstable/main TranslationIndex [2295 B]
+Get:15 http://ftp.us.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://ftp.us.debian.org unstable/main Translation-en [3953 kB]
+Get:17 http://incoming.debian.org unstable/contrib s390x Packages [36.6 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:21 http://incoming.debian.org Sources [31.5 kB]
-Get:22 http://incoming.debian.org Packages [498 kB]
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:19 http://incoming.debian.org Sources [43.6 kB]
+Get:20 http://incoming.debian.org Packages [767 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3953 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.2 MB in 11s (2986 kB/s)
+Fetched 33.7 MB in 1min 28s (381 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -611,11 +616,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (80.7 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (379 kB/s)
Download complete and in download only mode
Check arch
@@ -629,18 +634,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5+b1)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -649,13 +654,13 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1+b1)
+libc6-dev: already installed (2.13-30)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -664,8 +669,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -674,49 +679,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
-Need to get 10.3 MB of archives.
-After this operation, 27.7 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 47 not upgraded.
+Need to get 10.4 MB of archives.
+After this operation, 27.9 MB of additional disk space will be used.
+Get:1 http://ftp.us.debian.org/debian/ unstable/main zlib1g s390x 1:1.2.7.dfsg-1 [92.6 kB]
+Get:2 http://ftp.us.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:3 http://ftp.us.debian.org/debian/ unstable/main libasprintf0c2 s390x 0.18.1.1-7 [26.6 kB]
+Get:4 http://ftp.us.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:5 http://ftp.us.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-5 [254 kB]
+Get:6 http://ftp.us.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
+Get:7 http://ftp.us.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:8 http://ftp.us.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.2-1 [2104 kB]
+Get:9 http://ftp.us.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:10 http://ftp.us.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:11 http://ftp.us.debian.org/debian/ unstable/main libgettextpo0 s390x 0.18.1.1-7 [157 kB]
+Get:12 http://ftp.us.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:13 http://ftp.us.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:14 http://ftp.us.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:15 http://ftp.us.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:16 http://ftp.us.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-7 [155 kB]
+Get:17 http://ftp.us.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:18 http://ftp.us.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-7 [2030 kB]
+Get:19 http://ftp.us.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://ftp.us.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://ftp.us.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://ftp.us.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.7.dfsg-1 [219 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 10.3 MB in 0s (11.6 MB/s)
+Fetched 10.4 MB in 10s (1008 kB/s)
+(Reading database ... 10861 files and directories currently installed.)
+Preparing to replace zlib1g:s390x 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_s390x.deb) ...
+Unpacking replacement zlib1g:s390x ...
+Setting up zlib1g:s390x (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1:s390x.
-(Reading database ... 10853 files and directories currently installed.)
+(Reading database ... 10861 files and directories currently installed.)
Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libasprintf0c2:s390x.
+Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package libmagic1:s390x.
Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
Selecting previously unselected package libpcre3:s390x.
-Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-5_s390x.deb) ...
Selecting previously unselected package libxml2:s390x.
Unpacking libxml2:s390x (from .../libxml2_2.7.8.dfsg-9_s390x.deb) ...
Selecting previously unselected package libffi5:s390x.
Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
Selecting previously unselected package libglib2.0-0:s390x.
-Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.2-1_s390x.deb) ...
Selecting previously unselected package libcroco3:s390x.
Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
Selecting previously unselected package libunistring0:s390x.
Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libgettextpo0:s390x.
+Unpacking libgettextpo0:s390x (from .../libgettextpo0_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
Selecting previously unselected package groff-base.
@@ -726,28 +745,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5+b1_s390x.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:s390x.
-Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_s390x.deb) ...
Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libasprintf0c2:s390x (0.18.1.1-7) ...
Setting up libmagic1:s390x (5.11-1) ...
-Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libpcre3:s390x (1:8.30-5) ...
Setting up libxml2:s390x (2.7.8.dfsg-9) ...
Setting up libffi5:s390x (3.0.10-3+b1) ...
-Setting up libglib2.0-0:s390x (2.32.0-4) ...
+Setting up libglib2.0-0:s390x (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:s390x (0.6.5-1) ...
Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libgettextpo0:s390x (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -755,22 +776,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15+b1) ...
-Setting up gettext (0.18.1.1-5+b1) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:s390x (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 47 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6-dev_2.13-30 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.15-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6_2.13-30 libc6-dev_2.13-30 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -781,14 +802,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -798,46 +820,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -877,9 +899,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -889,73 +911,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390x.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org> >../tabix_0.2.5-3_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2149
+Build finished at 20120512-0731
-tabix_0.2.5-2_s390x.changes:
+tabix_0.2.5-3_s390x.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: s390x
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
+Maintainer: s390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
- .
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 430c0c56548851c47209307ffbfe786453fba96d 63986 tabix_0.2.5-2_s390x.deb
+ 93f16c05a556c3ef46908176c21e20869e8433f4 64548 tabix_0.2.5-3_s390x.deb
Checksums-Sha256:
- c5749f750f15ed2b0fb4bc7fa100be78c510816f6f72a1280118a70bdbed2b73 63986 tabix_0.2.5-2_s390x.deb
+ 6939b8482e986245ac097894a96bf9ee899ceddc648ca5bd41e98405813d6d52 64548 tabix_0.2.5-3_s390x.deb
Files:
- 202e6360a875ee25d9b2dc24ccdde142 63986 science optional tabix_0.2.5-2_s390x.deb
+ ae9e3f2b87131c0f823948b5276ad3d6 64548 science optional tabix_0.2.5-3_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_s390x.deb
+tabix_0.2.5-3_s390x.deb
───────────────────────
new debian package, version 2.0.
- size 63986 bytes: control archive= 992 bytes.
+ size 64548 bytes: control archive= 994 bytes.
781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 164
+ Installed-Size: 168
Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -968,26 +979,26 @@ tabix_0.2.5-2_s390x.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/bin/
--rwxr-xr-x root/root 30480 2012-04-25 21:49 ./usr/bin/bgzip
--rwxr-xr-x root/root 81072 2012-04-25 21:49 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:49 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/bin/
+-rwxr-xr-x root/root 31152 2012-05-12 07:31 ./usr/bin/bgzip
+-rwxr-xr-x root/root 84680 2012-05-12 07:31 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:31 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2012-04-25 21:49 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+lrwxrwxrwx root/root 0 2012-05-12 07:31 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1001,7 +1012,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-1026279f-80f1-4430-bcdb-6f43f7566348/sid-s390x-sbuild/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-ae763de0-fb43-4c01-9f39-df27379b7df0/build/buildd-tabix_0.2.5-3-s390x-C5IdGN
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1009,18 +1020,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390x
-Build-Space: 1996
-Build-Time: 9
+Build-Space: 1984
+Build-Time: 30
Distribution: sid
-Install-Time: 7
-Job: tabix_0.2.5-2
+Install-Time: 47
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 42
-Source-Version: 0.2.5-2
-Space: 1996
+Package-Time: 183
+Source-Version: 0.2.5-3
+Space: 1984
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2149
-Build needed 00:00:42, 1996k disc space
-Signature with key 'BE1C5586' requested:
+Finished at 20120512-0731
+Build needed 00:03:03, 1984k disc space
+Signature with key 'D1955623' requested:
diff --git a/s390x.log b/s390x.log
index 91f90b8..16a859f 100644
--- a/s390x.log
+++ b/s390x.log
@@ -1,71 +1,70 @@
-From buildd at zandonai.debian.org Wed Apr 25 21:49:51 2012
-Return-path: <buildd at zandonai.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at zappa.debian.org Sat May 12 07:32:00 2012
+Return-path: <buildd at zappa.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5v-0008Pp-Ir
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:49:51 +0000
-Received: from zandonai.debian.org ([80.245.147.46])
+ (Exim 4.72) (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o4-0002ES-8M
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:00 +0000
+Received: from [148.100.96.103] (helo=zappa.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=zandonai.debian.org,
- EMAIL=hostmaster at zandonai.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5u-00086r-HC; Wed, 25 Apr 2012 21:49:50 +0000
-Received: from buildd by zandonai.debian.org with local (Exim 4.72)
- (envelope-from <buildd at zandonai.debian.org>)
- id 1SNA5u-0001qu-3D; Wed, 25 Apr 2012 21:49:50 +0000
-Message-Id: <E1SNA5u-0001qu-3D at zandonai.debian.org>
+ CN=zappa.debian.org, EMAIL=hostmaster at zappa.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o3-0004xE-32; Sat, 12 May 2012 07:31:59 +0000
+Received: from buildd by zappa.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at zappa.debian.org>)
+ id 1ST6o1-00055e-1w; Sat, 12 May 2012 07:31:57 +0000
+Message-Id: <E1ST6o1-00055e-1w at zappa.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:49:50 +0000
-From: buildd on zandonai <buildd at zandonai.debian.org>
+Date: Sat, 12 May 2012 07:31:56 +0000
+From: buildd on zappa <buildd at zappa.debian.org>
To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on s390x (dist=sid)
-Key-Id: BE1C5586
+Subject: Log for successful build of tabix_0.2.5-3 on s390x (dist=sid)
+Key-Id: D1955623
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zappa.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (s390x) 25 Apr 2012 21:49 ║
+║ tabix 0.2.5-3 (s390x) 12 May 2012 07:28 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6244 kB]
-Get:4 http://ftp.de.debian.org unstable/contrib Sources [53.9 kB]
-Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.9 kB]
-Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5700 kB]
+Get:1 http://ftp.us.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.us.debian.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
-Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
-Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:8 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
-Get:9 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:10 http://incoming.debian.org Release.gpg [836 B]
-Get:11 http://ftp.de.debian.org unstable/main Translation-en [3943 kB]
-Get:12 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [5701 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:7 http://ftp.us.debian.org unstable/contrib Sources [54.7 kB]
+Get:8 http://ftp.us.debian.org unstable/non-free Sources [96.6 kB]
+Get:9 http://ftp.us.debian.org unstable/main s390x Packages [5725 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:12 http://incoming.debian.org unstable/main s390x Packages [5725 kB]
+Get:13 http://ftp.us.debian.org unstable/contrib s390x Packages [36.6 kB]
+Ign http://ftp.us.debian.org unstable/contrib TranslationIndex
+Get:14 http://ftp.us.debian.org unstable/main TranslationIndex [2295 B]
+Get:15 http://ftp.us.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://ftp.us.debian.org unstable/main Translation-en [3953 kB]
+Get:17 http://incoming.debian.org unstable/contrib s390x Packages [36.6 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
-Get:18 http://incoming.debian.org Release [1601 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3943 kB]
-Get:21 http://incoming.debian.org Sources [31.5 kB]
-Get:22 http://incoming.debian.org Packages [498 kB]
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2295 B]
+Get:19 http://incoming.debian.org Sources [43.6 kB]
+Get:20 http://incoming.debian.org Packages [767 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3953 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.2 MB in 11s (2986 kB/s)
+Fetched 33.7 MB in 1min 28s (381 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +85,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (80.7 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (379 kB/s)
Download complete and in download only mode
Check arch
@@ -104,18 +103,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5+b1)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -124,13 +123,13 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), zlib1g-dev
Checking for already installed dependencies...
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1+b1)
+libc6-dev: already installed (2.13-30)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
@@ -139,8 +138,8 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -149,49 +148,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 38 not upgraded.
-Need to get 10.3 MB of archives.
-After this operation, 27.7 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 47 not upgraded.
+Need to get 10.4 MB of archives.
+After this operation, 27.9 MB of additional disk space will be used.
+Get:1 http://ftp.us.debian.org/debian/ unstable/main zlib1g s390x 1:1.2.7.dfsg-1 [92.6 kB]
+Get:2 http://ftp.us.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:3 http://ftp.us.debian.org/debian/ unstable/main libasprintf0c2 s390x 0.18.1.1-7 [26.6 kB]
+Get:4 http://ftp.us.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:5 http://ftp.us.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-5 [254 kB]
+Get:6 http://ftp.us.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-9 [895 kB]
+Get:7 http://ftp.us.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:8 http://ftp.us.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.2-1 [2104 kB]
+Get:9 http://ftp.us.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:10 http://ftp.us.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:11 http://ftp.us.debian.org/debian/ unstable/main libgettextpo0 s390x 0.18.1.1-7 [157 kB]
+Get:12 http://ftp.us.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:13 http://ftp.us.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:14 http://ftp.us.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:15 http://ftp.us.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:16 http://ftp.us.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-7 [155 kB]
+Get:17 http://ftp.us.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:18 http://ftp.us.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-7 [2030 kB]
+Get:19 http://ftp.us.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://ftp.us.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://ftp.us.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://ftp.us.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.7.dfsg-1 [219 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 10.3 MB in 0s (11.6 MB/s)
+Fetched 10.4 MB in 10s (1008 kB/s)
+(Reading database ... 10861 files and directories currently installed.)
+Preparing to replace zlib1g:s390x 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_s390x.deb) ...
+Unpacking replacement zlib1g:s390x ...
+Setting up zlib1g:s390x (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1:s390x.
-(Reading database ... 10853 files and directories currently installed.)
+(Reading database ... 10861 files and directories currently installed.)
Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libasprintf0c2:s390x.
+Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package libmagic1:s390x.
Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
Selecting previously unselected package libpcre3:s390x.
-Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-5_s390x.deb) ...
Selecting previously unselected package libxml2:s390x.
Unpacking libxml2:s390x (from .../libxml2_2.7.8.dfsg-9_s390x.deb) ...
Selecting previously unselected package libffi5:s390x.
Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
Selecting previously unselected package libglib2.0-0:s390x.
-Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.2-1_s390x.deb) ...
Selecting previously unselected package libcroco3:s390x.
Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
Selecting previously unselected package libunistring0:s390x.
Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libgettextpo0:s390x.
+Unpacking libgettextpo0:s390x (from .../libgettextpo0_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
Selecting previously unselected package groff-base.
@@ -201,28 +214,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5+b1_s390x.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_s390x.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:s390x.
-Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_s390x.deb) ...
Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libasprintf0c2:s390x (0.18.1.1-7) ...
Setting up libmagic1:s390x (5.11-1) ...
-Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libpcre3:s390x (1:8.30-5) ...
Setting up libxml2:s390x (2.7.8.dfsg-9) ...
Setting up libffi5:s390x (3.0.10-3+b1) ...
-Setting up libglib2.0-0:s390x (2.32.0-4) ...
+Setting up libglib2.0-0:s390x (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:s390x (0.6.5-1) ...
Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libgettextpo0:s390x (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -230,22 +245,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5+b1) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15+b1) ...
-Setting up gettext (0.18.1.1-5+b1) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:s390x (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 47 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.13-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-3 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-3 g++-4.6_4.6.3-1 gcc_4:4.6.3-3 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-1 libgdbm3_1.8.3-10+b1 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-5 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libss2_1.42.2-1 libstdc++6_4.7.0-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-5 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-5 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu2 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-4 gcc-4.6_4.6.3-4 libc6-dev_2.13-30 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 linux-libc-dev_3.2.15-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-4 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120509 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-4 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-4 gcc-4.6-base_4.6.3-4 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6_2.13-30 libc6-dev_2.13-30 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libslang2_2.2.4-8 libss2_1.42.2-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-4 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian1 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3+b1 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -256,14 +271,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -273,46 +289,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -352,9 +368,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-s390x-C5IdGN/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -364,73 +380,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../tabix_0.2.5-2_s390x.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org> >../tabix_0.2.5-3_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2149
+Build finished at 20120512-0731
-tabix_0.2.5-2_s390x.changes:
+tabix_0.2.5-3_s390x.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: s390x
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
+Maintainer: s390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 430c0c56548851c47209307ffbfe786453fba96d 63986 tabix_0.2.5-2_s390x.deb
+ 93f16c05a556c3ef46908176c21e20869e8433f4 64548 tabix_0.2.5-3_s390x.deb
Checksums-Sha256:
- c5749f750f15ed2b0fb4bc7fa100be78c510816f6f72a1280118a70bdbed2b73 63986 tabix_0.2.5-2_s390x.deb
+ 6939b8482e986245ac097894a96bf9ee899ceddc648ca5bd41e98405813d6d52 64548 tabix_0.2.5-3_s390x.deb
Files:
- 202e6360a875ee25d9b2dc24ccdde142 63986 science optional tabix_0.2.5-2_s390x.deb
+ ae9e3f2b87131c0f823948b5276ad3d6 64548 science optional tabix_0.2.5-3_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_s390x.deb
+tabix_0.2.5-3_s390x.deb
───────────────────────
new debian package, version 2.0.
- size 63986 bytes: control archive= 992 bytes.
+ size 64548 bytes: control archive= 994 bytes.
781 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 164
+ Installed-Size: 168
Depends: libc6 (>= 2.13), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -443,26 +448,26 @@ tabix_0.2.5-2_s390x.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/bin/
--rwxr-xr-x root/root 30480 2012-04-25 21:49 ./usr/bin/bgzip
--rwxr-xr-x root/root 81072 2012-04-25 21:49 ./usr/bin/tabix
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:49 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/
--rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/bin/
+-rwxr-xr-x root/root 31152 2012-05-12 07:31 ./usr/bin/bgzip
+-rwxr-xr-x root/root 84680 2012-05-12 07:31 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:31 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/tabix/
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2012-04-25 21:49 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+drwxr-xr-x root/root 0 2012-05-12 07:31 ./usr/share/doc/tabix/examples/
-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
-lrwxrwxrwx root/root 0 2012-04-25 21:49 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
+lrwxrwxrwx root/root 0 2012-05-12 07:31 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -476,7 +481,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-1026279f-80f1-4430-bcdb-6f43f7566348/sid-s390x-sbuild/build/buildd-tabix_0.2.5-2-s390x-cdGCzQ
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-ae763de0-fb43-4c01-9f39-df27379b7df0/build/buildd-tabix_0.2.5-3-s390x-C5IdGN
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -484,18 +489,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390x
-Build-Space: 1996
-Build-Time: 9
+Build-Space: 1984
+Build-Time: 30
Distribution: sid
-Install-Time: 7
-Job: tabix_0.2.5-2
+Install-Time: 47
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 42
-Source-Version: 0.2.5-2
-Space: 1996
+Package-Time: 183
+Source-Version: 0.2.5-3
+Space: 1984
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2149
-Build needed 00:00:42, 1996k disc space
-Signature with key 'BE1C5586' requested:
+Finished at 20120512-0731
+Build needed 00:03:03, 1984k disc space
+Signature with key 'D1955623' requested:
diff --git a/sparc.log b/sparc.log
index 93afa65..2404f09 100644
--- a/sparc.log
+++ b/sparc.log
@@ -1,71 +1,68 @@
-From buildd at stadler.debian.org Wed Apr 25 21:20:00 2012
-Return-path: <buildd at stadler.debian.org>
+From buildd at schroeder.debian.org Sat May 12 07:32:56 2012
+Return-path: <buildd at schroeder.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at stadler.debian.org>)
- id 1SN9d2-0003zO-Gj
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:20:00 +0000
-Received: from stadler.debian.org ([2a02:16a8:dc41:100::ffff])
+ (Exim 4.72) (envelope-from <buildd at schroeder.debian.org>)
+ id 1ST6oy-0002M4-14
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:56 +0000
+Received: from [2001:b68:ff:5:203:baff:fe5a:53a5] (helo=schroeder.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=stadler.debian.org, EMAIL=hostmaster at stadler.debian.org (verified)
+ CN=schroeder.debian.org,
+ EMAIL=hostmaster at schroeder.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at stadler.debian.org>)
- id 1SN9d1-0006Ny-Gb
- for logs at buildd.debian.org; Wed, 25 Apr 2012 21:19:59 +0000
-Received: from buildd by stadler.debian.org with local (Exim 4.72)
- (envelope-from <buildd at stadler.debian.org>)
- id 1SN9d2-00005b-AE; Wed, 25 Apr 2012 21:20:00 +0000
-Message-Id: <E1SN9d2-00005b-AE at stadler.debian.org>
+ (Exim 4.72) (envelope-from <buildd at schroeder.debian.org>)
+ id 1ST6ox-00068j-6c
+ for logs at buildd.debian.org; Sat, 12 May 2012 07:32:55 +0000
+Received: from buildd by schroeder.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at schroeder.debian.org>)
+ id 1ST6ov-00086f-G4; Sat, 12 May 2012 07:32:53 +0000
+Message-Id: <E1ST6ov-00086f-G4 at schroeder.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 25 Apr 2012 21:20:00 +0000
-From: buildd on stadler <buildd at stadler.debian.org>
-To: logs at buildd.debian.org,buildd-admin at stadler.debian.org
-Subject: Log for successful build of tabix_0.2.5-2 on sparc (dist=sid)
-Key-Id: F53143B2
+Date: Sat, 12 May 2012 07:32:53 +0000
+From: buildd on schroeder <buildd at schroeder.debian.org>
+To: logs at buildd.debian.org,buildd-admin at schroeder.debian.org
+Subject: Log for successful build of tabix_0.2.5-3 on sparc (dist=sid)
+Key-Id: 24E4F805
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on stadler.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on schroeder.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ tabix 0.2.5-2 (sparc) 25 Apr 2012 21:15 ║
+║ tabix 0.2.5-3 (sparc) 12 May 2012 07:29 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: tabix
-Version: 0.2.5-2
-Source Version: 0.2.5-2
+Version: 0.2.5-3
+Source Version: 0.2.5-3
Architecture: sparc
-Get:1 http://debian.inode.at unstable InRelease [210 kB]
-Get:2 http://incoming.debian.org unstable InRelease [210 kB]
-Get:3 http://debian.inode.at unstable/main Sources [6244 kB]
+Get:1 http://ftp.hr.debian.org unstable InRelease [233 kB]
+Get:2 http://incoming.debian.org unstable InRelease [233 kB]
+Get:3 http://ftp.hr.debian.org unstable/main Sources [6282 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
Get:5 http://incoming.debian.org Release [1601 B]
-Get:6 http://incoming.debian.org unstable/main Sources [6244 kB]
-Get:7 http://debian.inode.at unstable/contrib Sources [53.9 kB]
-Get:8 http://debian.inode.at unstable/non-free Sources [97.9 kB]
-Get:9 http://debian.inode.at unstable/main sparc Packages [5832 kB]
-Get:10 http://debian.inode.at unstable/contrib sparc Packages [36.8 kB]
-Ign http://debian.inode.at unstable/contrib TranslationIndex
-Get:11 http://debian.inode.at unstable/main TranslationIndex [2223 B]
-Get:12 http://debian.inode.at unstable/contrib Translation-en [37.0 kB]
-Get:13 http://debian.inode.at unstable/main Translation-en [3943 kB]
-Get:14 http://incoming.debian.org unstable/contrib Sources [53.9 kB]
-Get:15 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
-Get:16 http://incoming.debian.org unstable/main sparc Packages [5833 kB]
-Get:17 http://incoming.debian.org unstable/contrib sparc Packages [36.8 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:18 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
-Get:19 http://incoming.debian.org Sources [33.5 kB]
-Get:20 http://incoming.debian.org Packages [517 kB]
-Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
-Get:22 http://incoming.debian.org unstable/main Translation-en [3943 kB]
+Get:6 http://incoming.debian.org unstable/main Sources [6282 kB]
+Get:7 http://ftp.hr.debian.org unstable/contrib Sources [54.7 kB]
+Get:8 http://ftp.hr.debian.org unstable/non-free Sources [96.6 kB]
+Get:9 http://ftp.hr.debian.org unstable/main sparc Packages [5852 kB]
+Get:10 http://ftp.hr.debian.org unstable/contrib sparc Packages [37.1 kB]
+Get:11 http://ftp.hr.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.hr.debian.org unstable/main Translation-en [3953 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.7 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [96.6 kB]
+Get:15 http://incoming.debian.org unstable/main sparc Packages [5852 kB]
+Get:16 http://incoming.debian.org unstable/contrib sparc Packages [37.1 kB]
+Get:17 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:18 http://incoming.debian.org unstable/main Translation-en [3953 kB]
+Get:19 http://incoming.debian.org Sources [43.6 kB]
+Get:20 http://incoming.debian.org Packages [767 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.5 MB in 1min 11s (469 kB/s)
+Fetched 33.9 MB in 1min 19s (429 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +83,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'tabix' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/debian-med/tabix.git
-Need to get 59.7 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (dsc) [1313 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (tar) [54.2 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-2 (diff) [4232 B]
-Fetched 59.7 kB in 0s (95.5 kB/s)
+Need to get 60.5 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (dsc) [1313 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (tar) [54.2 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ tabix 0.2.5-3 (diff) [4989 B]
+Fetched 60.5 kB in 0s (75.1 kB/s)
Download complete and in download only mode
Check arch
@@ -104,24 +101,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.3-1)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libapt-pkg4.12
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libapt-pkg4.12
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -136,15 +127,15 @@ bash: already installed (4.2-2)
coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3)
-diffutils: already installed (1:3.2-3)
-dpkg: already installed (1.16.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.3)
e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-grep: already installed (2.11-2)
+grep: already installed (2.11-3)
gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-6)
-ncurses-bin: already installed (5.9-6)
+ncurses-base: already installed (5.9-7)
+ncurses-bin: already installed (5.9-7)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
@@ -154,27 +145,24 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
-libc6-dev: already installed (2.13-27)
-libc6-dev-sparc64: already installed (2.13-27)
-gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+libc6-dev: already installed (2.13-32)
+libc6-dev-sparc64: already installed (2.13-32)
+gcc: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-5 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.3 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120419
+Using default version 9.20120509
zlib1g-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper zlib1g-dev
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libapt-pkg4.12
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf
+ libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0 libmagic1
+ libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
libmail-box-perl
@@ -183,49 +171,63 @@ Recommended packages:
libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libcroco3 libffi5 libglib2.0-0 libmagic1 libpcre3
- libpipeline1 libunistring0 libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 19 newly installed, 0 to remove and 21 not upgraded.
-Need to get 9619 kB of archives.
-After this operation, 25.6 MB of additional disk space will be used.
-Get:1 http://debian.inode.at/debian/ unstable/main libpipeline1 sparc 1.2.1-1 [35.8 kB]
-Get:2 http://debian.inode.at/debian/ unstable/main libmagic1 sparc 5.11-1 [249 kB]
-Get:3 http://debian.inode.at/debian/ unstable/main libpcre3 sparc 1:8.30-4 [246 kB]
-Get:4 http://debian.inode.at/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-9 [820 kB]
-Get:5 http://debian.inode.at/debian/ unstable/main libffi5 sparc 3.0.10-3 [22.7 kB]
-Get:6 http://debian.inode.at/debian/ unstable/main libglib2.0-0 sparc 2.32.0-4 [1902 kB]
-Get:7 http://debian.inode.at/debian/ unstable/main libcroco3 sparc 0.6.5-1 [135 kB]
-Get:8 http://debian.inode.at/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
-Get:9 http://debian.inode.at/debian/ unstable/main bsdmainutils sparc 9.0.1 [205 kB]
-Get:10 http://debian.inode.at/debian/ unstable/main groff-base sparc 1.21-7 [1123 kB]
-Get:11 http://debian.inode.at/debian/ unstable/main man-db sparc 2.6.1-2 [1031 kB]
-Get:12 http://debian.inode.at/debian/ unstable/main file sparc 5.11-1 [52.7 kB]
-Get:13 http://debian.inode.at/debian/ unstable/main gettext-base sparc 0.18.1.1-5 [140 kB]
-Get:14 http://debian.inode.at/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
-Get:15 http://debian.inode.at/debian/ unstable/main gettext sparc 0.18.1.1-5 [1983 kB]
-Get:16 http://debian.inode.at/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:17 http://debian.inode.at/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:18 http://debian.inode.at/debian/ unstable/main debhelper all 9.20120419 [694 kB]
-Get:19 http://debian.inode.at/debian/ unstable/main zlib1g-dev sparc 1:1.2.6.dfsg-2 [209 kB]
+ intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libglib2.0-0
+ libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ zlib1g-dev
+The following packages will be upgraded:
+ zlib1g
+1 upgraded, 21 newly installed, 0 to remove and 25 not upgraded.
+Need to get 9774 kB of archives.
+After this operation, 25.7 MB of additional disk space will be used.
+Get:1 http://ftp.hr.debian.org/debian/ unstable/main zlib1g sparc 1:1.2.7.dfsg-1 [86.3 kB]
+Get:2 http://ftp.hr.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.1-1 [35.8 kB]
+Get:3 http://ftp.hr.debian.org/debian/ unstable/main libasprintf0c2 sparc 0.18.1.1-7 [26.3 kB]
+Get:4 http://ftp.hr.debian.org/debian/ unstable/main libmagic1 sparc 5.11-1 [249 kB]
+Get:5 http://ftp.hr.debian.org/debian/ unstable/main libpcre3 sparc 1:8.30-5 [246 kB]
+Get:6 http://ftp.hr.debian.org/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-9 [820 kB]
+Get:7 http://ftp.hr.debian.org/debian/ unstable/main libffi5 sparc 3.0.10-3 [22.7 kB]
+Get:8 http://ftp.hr.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.32.2-1 [1924 kB]
+Get:9 http://ftp.hr.debian.org/debian/ unstable/main libcroco3 sparc 0.6.5-1 [135 kB]
+Get:10 http://ftp.hr.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
+Get:11 http://ftp.hr.debian.org/debian/ unstable/main libgettextpo0 sparc 0.18.1.1-7 [128 kB]
+Get:12 http://ftp.hr.debian.org/debian/ unstable/main bsdmainutils sparc 9.0.1 [205 kB]
+Get:13 http://ftp.hr.debian.org/debian/ unstable/main groff-base sparc 1.21-7 [1123 kB]
+Get:14 http://ftp.hr.debian.org/debian/ unstable/main man-db sparc 2.6.1-2 [1031 kB]
+Get:15 http://ftp.hr.debian.org/debian/ unstable/main file sparc 5.11-1 [52.7 kB]
+Get:16 http://ftp.hr.debian.org/debian/ unstable/main gettext-base sparc 0.18.1.1-7 [130 kB]
+Get:17 http://ftp.hr.debian.org/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
+Get:18 http://ftp.hr.debian.org/debian/ unstable/main gettext sparc 0.18.1.1-7 [1885 kB]
+Get:19 http://ftp.hr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:20 http://ftp.hr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:21 http://ftp.hr.debian.org/debian/ unstable/main debhelper all 9.20120509 [694 kB]
+Get:22 http://ftp.hr.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.7.dfsg-1 [211 kB]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 9619 kB in 2s (4460 kB/s)
+Fetched 9774 kB in 8s (1120 kB/s)
+(Reading database ... 11087 files and directories currently installed.)
+Preparing to replace zlib1g:sparc 1:1.2.6.dfsg-2 (using .../zlib1g_1%3a1.2.7.dfsg-1_sparc.deb) ...
+Unpacking replacement zlib1g:sparc ...
+Setting up zlib1g:sparc (1:1.2.7.dfsg-1) ...
Selecting previously unselected package libpipeline1:sparc.
-(Reading database ... 11180 files and directories currently installed.)
+(Reading database ... 11087 files and directories currently installed.)
Unpacking libpipeline1:sparc (from .../libpipeline1_1.2.1-1_sparc.deb) ...
+Selecting previously unselected package libasprintf0c2:sparc.
+Unpacking libasprintf0c2:sparc (from .../libasprintf0c2_0.18.1.1-7_sparc.deb) ...
Selecting previously unselected package libmagic1:sparc.
Unpacking libmagic1:sparc (from .../libmagic1_5.11-1_sparc.deb) ...
Selecting previously unselected package libpcre3:sparc.
-Unpacking libpcre3:sparc (from .../libpcre3_1%3a8.30-4_sparc.deb) ...
+Unpacking libpcre3:sparc (from .../libpcre3_1%3a8.30-5_sparc.deb) ...
Selecting previously unselected package libxml2:sparc.
Unpacking libxml2:sparc (from .../libxml2_2.7.8.dfsg-9_sparc.deb) ...
Selecting previously unselected package libffi5:sparc.
Unpacking libffi5:sparc (from .../libffi5_3.0.10-3_sparc.deb) ...
Selecting previously unselected package libglib2.0-0:sparc.
-Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.32.0-4_sparc.deb) ...
+Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.32.2-1_sparc.deb) ...
Selecting previously unselected package libcroco3:sparc.
Unpacking libcroco3:sparc (from .../libcroco3_0.6.5-1_sparc.deb) ...
Selecting previously unselected package libunistring0:sparc.
Unpacking libunistring0:sparc (from .../libunistring0_0.9.3-5_sparc.deb) ...
+Selecting previously unselected package libgettextpo0:sparc.
+Unpacking libgettextpo0:sparc (from .../libgettextpo0_0.18.1.1-7_sparc.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_sparc.deb) ...
Selecting previously unselected package groff-base.
@@ -235,28 +237,30 @@ Unpacking man-db (from .../man-db_2.6.1-2_sparc.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../archives/file_5.11-1_sparc.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_sparc.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-7_sparc.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_sparc.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_sparc.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-7_sparc.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120419_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120509_all.deb) ...
Selecting previously unselected package zlib1g-dev:sparc.
-Unpacking zlib1g-dev:sparc (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_sparc.deb) ...
+Unpacking zlib1g-dev:sparc (from .../zlib1g-dev_1%3a1.2.7.dfsg-1_sparc.deb) ...
Setting up libpipeline1:sparc (1.2.1-1) ...
+Setting up libasprintf0c2:sparc (0.18.1.1-7) ...
Setting up libmagic1:sparc (5.11-1) ...
-Setting up libpcre3:sparc (1:8.30-4) ...
+Setting up libpcre3:sparc (1:8.30-5) ...
Setting up libxml2:sparc (2.7.8.dfsg-9) ...
Setting up libffi5:sparc (3.0.10-3) ...
-Setting up libglib2.0-0:sparc (2.32.0-4) ...
+Setting up libglib2.0-0:sparc (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:sparc (0.6.5-1) ...
Setting up libunistring0:sparc (0.9.3-5) ...
+Setting up libgettextpo0:sparc (0.18.1.1-7) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
@@ -264,25 +268,22 @@ Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
+Setting up gettext-base (0.18.1.1-7) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-7) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120419) ...
-Setting up zlib1g-dev:sparc (1:1.2.6.dfsg-2) ...
+Setting up debhelper (9.20120509) ...
+Setting up zlib1g-dev:sparc (1:1.2.7.dfsg-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libapt-pkg4.12
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-sparc64-smp sparc (sparc64)
-Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.15-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-3 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-2 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.0 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libc6-dev-sparc64_2.13-27 libc6-sparc64_2.13-27 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-4 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libss2_1.42.2-2 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.15-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-6 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012b-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.6_4.6.3-5 gcc-4.6_4.6.3-5 libc6-dev_2.13-32 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 linux-libc-dev_3.2.16-1
+Package versions: apt_0.9.2 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.3-5 cpp-4.6_4.6.3-5 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120509 debian-archive-keyring_2012.1 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.3-5 g++-4.6_4.6.3-5 gcc_4:4.6.3-5 gcc-4.6_4.6.3-5 gcc-4.6-base_4.6.3-5 gcc-4.7-base_4.7.0-7 gettext_0.18.1.1-7 gettext-base_0.18.1.1-7 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg4.12_0.9.2 libasprintf0c2_0.18.1.1-7 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libc6-dev-sparc64_2.13-32 libc6-sparc64_2.13-32 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.3 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-7 libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-7 libglib2.0-0_2.32.2-1 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-7 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libss2_1.42.2-2 libstdc++6_4.7.0-7 libstdc++6-4.6-dev_4.6.3-5 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libxml2_2.7.8.dfsg-9 linux-libc-dev_3.2.16-1 login_1:4.1.5-1 lsb-base_4.1+Debian2 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -293,14 +294,15 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Apr 25 20:20:11 2012 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sat May 12 06:59:29 2012 UTC using DSA key ID C09FD35A
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-2.dsc
+dpkg-source: warning: failed to verify signature on ./tabix_0.2.5-3.dsc
dpkg-source: info: extracting tabix in tabix-0.2.5
dpkg-source: info: unpacking tabix_0.2.5.orig.tar.bz2
-dpkg-source: info: unpacking tabix_0.2.5-2.debian.tar.gz
+dpkg-source: info: unpacking tabix_0.2.5-3.debian.tar.gz
dpkg-source: info: applying count-set-but-not-used.patch
dpkg-source: info: applying use-dpkg-buildflags.patch
+dpkg-source: info: applying ld-as-needed.patch
Check disc space
────────────────
@@ -310,46 +312,46 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package tabix
-dpkg-buildpackage: source version 0.2.5-2
+dpkg-buildpackage: source version 0.2.5-3
dpkg-source --before-build tabix-0.2.5
dpkg-buildpackage: host architecture sparc
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
rm -fr gmon.out *.o a.out *.dSYM tabix bgzip *~ *.a tabix.aux tabix.log tabix.pdf *.class libtabix.*.dylib libtabix.so*
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
dh_auto_build -a
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
-make[2]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzf.c -o bgzf.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro kstring.c -o kstring.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro knetfile.c -o knetfile.o
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
+make[2]: Entering directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzf.c -o bgzf.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE kstring.c -o kstring.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE knetfile.c -o knetfile.o
knetfile.c: In function 'khttp_connect_file':
knetfile.c:418:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
knetfile.c: In function 'kftp_send_cmd':
knetfile.c:239:2: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro index.c -o index.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bedidx.c -o bedidx.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE index.c -o index.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bedidx.c -o bedidx.o
ar -cru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro main.c -o main.o
-gcc -g -Wall -O2 -fPIC -o tabix main.o -lm -lz -L. -ltabix
-gcc -c -D_FORTIFY_SOURCE=2 -g -Wall -O2 -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -Wl,-z,relro bgzip.c -o bgzip.o
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE main.c -o main.o
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o tabix main.o -L. -ltabix -lm -lz
+gcc -c -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE bgzip.c -o bgzip.o
bgzip.c: In function 'main':
bgzip.c:198:9: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
bgzip.c: In function 'write_open':
bgzip.c:57:9: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
-gcc -g -Wall -O2 -fPIC -o bgzip bgzip.o bgzf.o knetfile.o -lz
-make[2]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -Wl,-z,relro -o bgzip bgzip.o bgzf.o knetfile.o -lz
+make[2]: Leaving directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
@@ -389,9 +391,9 @@ dh binary-arch
dh_usrlocal -a
dh_link -a
debian/rules override_dh_compress
-make[1]: Entering directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[1]: Entering directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
dh_compress --exclude=.tbi
-make[1]: Leaving directory `/build/buildd-tabix_0.2.5-2-sparc-K2jvsv/tabix-0.2.5'
+make[1]: Leaving directory `/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u/tabix-0.2.5'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
@@ -401,73 +403,62 @@ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tabi
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
-dpkg-deb: building package `tabix' in `../tabix_0.2.5-2_sparc.deb'.
- dpkg-genchanges -B -mStalder <buildd_sparc-stadler at buildd.debian.org> >../tabix_0.2.5-2_sparc.changes
+dpkg-deb: building package `tabix' in `../tabix_0.2.5-3_sparc.deb'.
+ dpkg-genchanges -B -msparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org> >../tabix_0.2.5-3_sparc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build tabix-0.2.5
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120425-2119
+Build finished at 20120512-0732
-tabix_0.2.5-2_sparc.changes:
+tabix_0.2.5-3_sparc.changes:
Format: 1.8
-Date: Wed, 25 Apr 2012 17:02:10 +0200
+Date: Fri, 11 May 2012 13:32:56 +0200
Source: tabix
Binary: tabix
Architecture: sparc
-Version: 0.2.5-2
+Version: 0.2.5-3
Distribution: sid
Urgency: low
-Maintainer: Stalder <buildd_sparc-stadler at buildd.debian.org>
+Maintainer: sparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Description:
tabix - generic indexer for TAB-delimited genome position files
-Closes: 626267
+Closes: 632150 670759
Changes:
- tabix (0.2.5-2) unstable; urgency=low
+ tabix (0.2.5-3) unstable; urgency=low
.
- [ Charles Plessy ]
- 7a09003 Added metadata about Upstream in debian/upstream.
- 1a85d96 Refreshed Debian copyright file
- 9c70833 Include 7 digits of the commit ID in the changelog entry.
- .
- [ Andreas Tille ]
- * debian/patches/count-set-but-not-used.patch: uncomment unused
- variable
- Closes: #626267
- * debian/control:
- - Standards-Version: 3.9.3 (no changes needed)
- - removed cdbs from Build-Depends
- * debian/rules: Switched to dh to easily enable hardening flags
- * debhelper 9 (control+compat) to enable building with hardening
- flags
- * debian/patches/use-dpkg-buildflags.patch: Regard hardening flags
- * debian/watch: Use sf.net redirector
+ * debian/patches/use-dpkg-buildflags.patch: Really enable hardening
+ build flags (Thanks for the patch to Simon Ruderich <simon at ruderich.org>)
+ Closes: #670759
+ * debian/patches/ld-as-needed.patch: Enable building with --as-needed
+ (Thanks to David Shorten <dpshorten at gmail.com> for the patch)
+ Closes: #632150
Checksums-Sha1:
- 9780653c13007906833ba2e7b98358690f3771d1 59962 tabix_0.2.5-2_sparc.deb
+ 47abde1553fc44eecfffd5ddfd6cb02b11b6c1c5 56544 tabix_0.2.5-3_sparc.deb
Checksums-Sha256:
- 36079de766bf02977dce43cdf9c03c847b0046f40c186093ae4d759f0fbd1247 59962 tabix_0.2.5-2_sparc.deb
+ 1f3963f4de4bbb3600695356897ed4b58def814d831523f67480ff71f1a9eabc 56544 tabix_0.2.5-3_sparc.deb
Files:
- f774b4973123b406e01e635d7f22c6c0 59962 science optional tabix_0.2.5-2_sparc.deb
+ d5d2067f4f113459843d11770c7ecfc5 56544 science optional tabix_0.2.5-3_sparc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-tabix_0.2.5-2_sparc.deb
+tabix_0.2.5-3_sparc.deb
───────────────────────
new debian package, version 2.0.
- size 59962 bytes: control archive= 992 bytes.
+ size 56544 bytes: control archive= 991 bytes.
780 bytes, 16 lines control
653 bytes, 10 lines md5sums
Package: tabix
- Version: 0.2.5-2
+ Version: 0.2.5-3
Architecture: sparc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 144
+ Installed-Size: 147
Depends: libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3)
Section: science
Priority: optional
@@ -480,26 +471,26 @@ tabix_0.2.5-2_sparc.deb
chromosomal coordinates. Fast data retrieval also works over network if an URI
is given as a file name.
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/bin/
--rwxr-xr-x root/root 68156 2012-04-25 21:19 ./usr/bin/tabix
--rwxr-xr-x root/root 23452 2012-04-25 21:19 ./usr/bin/bgzip
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/man/man1/
--rw-r--r-- root/root 1834 2012-04-25 21:19 ./usr/share/man/man1/tabix.1.gz
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/bin/
+-rwxr-xr-x root/root 26668 2012-05-12 07:32 ./usr/bin/bgzip
+-rwxr-xr-x root/root 67924 2012-05-12 07:32 ./usr/bin/tabix
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/man/man1/
+-rw-r--r-- root/root 1834 2012-05-12 07:32 ./usr/share/man/man1/tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/
-rw-r--r-- root/root 3487 2011-04-10 19:21 ./usr/share/doc/tabix/changelog.gz
--rw-r--r-- root/root 1507 2012-04-25 20:18 ./usr/share/doc/tabix/copyright
-drwxr-xr-x root/root 0 2012-04-25 21:19 ./usr/share/doc/tabix/examples/
--rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
--rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 1507 2012-05-12 06:57 ./usr/share/doc/tabix/copyright
+-rw-r--r-- root/root 2062 2012-05-12 06:57 ./usr/share/doc/tabix/README.test
+-rw-r--r-- root/root 811 2012-05-12 06:57 ./usr/share/doc/tabix/changelog.Debian.gz
-rw-r--r-- root/root 1169 2011-04-10 19:21 ./usr/share/doc/tabix/NEWS.gz
--rw-r--r-- root/root 682 2012-04-25 20:18 ./usr/share/doc/tabix/changelog.Debian.gz
--rw-r--r-- root/root 2062 2012-04-25 20:18 ./usr/share/doc/tabix/README.test
-lrwxrwxrwx root/root 0 2012-04-25 21:19 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
+drwxr-xr-x root/root 0 2012-05-12 07:32 ./usr/share/doc/tabix/examples/
+-rw-r--r-- root/root 3778 2010-12-08 17:34 ./usr/share/doc/tabix/examples/example.gtf.gz
+-rw-r--r-- root/root 259 2011-04-10 19:21 ./usr/share/doc/tabix/examples/example.gtf.gz.tbi
+lrwxrwxrwx root/root 0 2012-05-12 07:32 ./usr/share/man/man1/bgzip.1.gz -> tabix.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -513,7 +504,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-sparc-sbuild-9151ea23-9715-4695-a89e-29862190b57e/build/buildd-tabix_0.2.5-2-sparc-K2jvsv
+Purging /var/lib/schroot/mount/sid-sparc-sbuild-ac17b5a3-fd7e-4752-9202-5527750d228b/build/buildd-tabix_0.2.5-3-sparc-p4lZ7u
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -521,18 +512,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: sparc
-Build-Space: 1512
-Build-Time: 69
+Build-Space: 1552
+Build-Time: 36
Distribution: sid
-Install-Time: 66
-Job: tabix_0.2.5-2
+Install-Time: 60
+Job: tabix_0.2.5-3
Package: tabix
-Package-Time: 241
-Source-Version: 0.2.5-2
-Space: 1512
+Package-Time: 199
+Source-Version: 0.2.5-3
+Space: 1552
Status: successful
-Version: 0.2.5-2
+Version: 0.2.5-3
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120425-2119
-Build needed 00:04:01, 1512k disc space
-Signature with key 'F53143B2' requested:
+Finished at 20120512-0732
+Build needed 00:03:19, 1552k disc space
+Signature with key '24E4F805' requested:
--
Generic indexer for TAB-delimited genome position files.
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