[med-svn] [python-cutadapt] 02/05: Merge tag 'upstream/1.11'

[Olivier Sallou]

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osallou pushed a commit to branch master
in repository python-cutadapt.

commit 8d03ca2295536ab8b2a783b60862a5cf7caf2399
Merge: f9f4746 7782a43
Author: Olivier Sallou <olivier.sallou at debian.org>
Date:   Thu Aug 18 10:04:39 2016 +0200

    Merge tag 'upstream/1.11'
    
    Upstream version 1.11

 CHANGES.rst                            |  138 ++-
 MANIFEST.in                            |   19 +
 PKG-INFO                               |    5 +-
 PKG-INFO => cutadapt.egg-info/PKG-INFO |    5 +-
 cutadapt.egg-info/SOURCES.txt          |  210 ++++
 cutadapt.egg-info/dependency_links.txt |    1 +
 cutadapt.egg-info/top_level.txt        |    1 +
 cutadapt/__init__.py                   |    4 +-
 cutadapt/_seqio.c                      | 2107 ++++++++++----------------------
 cutadapt/_seqio.pyx                    |   16 +-
 cutadapt/_version.py                   |   21 +
 cutadapt/scripts/cutadapt.py           |   78 +-
 cutadapt/seqio.py                      |   32 +-
 doc/conf.py                            |   12 +-
 doc/guide.rst                          |   26 +-
 doc/recipes.rst                        |   32 +-
 setup.cfg                              |   13 +
 setup.py                               |   38 +-
 tests/cut/SRR2040271_1.fastq           |    8 +
 tests/data/SRR2040271_1.fastq          |    8 +
 tests/testpaired.py                    |   88 +-
 tests/tests.py                         |    5 +
 tests/testseqio.py                     |    4 +-
 versioneer.py                          | 1774 +++++++++++++++++++++++++++
 24 files changed, 3005 insertions(+), 1640 deletions(-)

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