[med-svn] [sra-sdk] 02/02: drop library packages since these are now build by ncbi-vdb

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository sra-sdk.

commit 5b44fef8531b5ec4f743683b1ac47ef6dbb0048e
Author: Andreas Tille <tille at debian.org>
Date:   Sat Jul 23 23:58:49 2016 +0200

    drop library packages since these are now build by ncbi-vdb
---
 debian/changelog                           |  1 +
 debian/control                             | 43 ------------------------------
 debian/rules                               |  1 +
 debian/sra-toolkit-libs-dev.install        |  1 -
 debian/sra-toolkit-libs0.install           |  1 -
 debian/sra-toolkit-libs0.lintian-overrides |  4 ---
 6 files changed, 2 insertions(+), 49 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 8d3f3d1..e5327a7 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -8,6 +8,7 @@ sra-sdk (2.7.0-1) UNRELEASED; urgency=medium
   * d/copyright: no need to exclude any files any more
   * cme fix dpkg-control
   * New Build-Depends: libhdf5-dev, libngs-sdk-dev (>= 1.2.4)
+  * drop library packages since these are now build by ncbi-vdb
 
   [ Steffen Moeller and Jon Ison ]
   * Introduced EDAM annotation to debian/upstream/edam
diff --git a/debian/control b/debian/control
index 2ad19ed..242dc86 100644
--- a/debian/control
+++ b/debian/control
@@ -5,13 +5,6 @@ Uploaders: Charles Plessy <plessy at debian.org>,
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               libbz2-dev,
-               zlib1g-dev,
-               libxml2-dev,
-               libhdf5-dev,
-               libaec-dev,
-               libmagic-dev,
-               libfuse-dev,
                libngs-sdk-dev (>= 1.2.4),
                libncbi-vdb-dev
 Standards-Version: 3.9.8
@@ -41,39 +34,3 @@ Description: utilities for the NCBI Sequence Read Archive
  will remain supported wherever possible in order to preserve
  operation of any existing scripts.
 
-Package: sra-toolkit-libs0
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Description: Libraries for the SRA Toolkit
- This package provides all libraries and modules for executing the
- NCBI SRA toolkit's programs.  This currently includes:
- .
-  libkdb                # physical layer reading library
-  libkfg                # configuration library
-  libkfs                # file system library
-  libklib               # support library
-  libkproc              # process synchronization library
-  libkq                 # cross-thread queue library
-  libksproc             # single-threaded emulation library
-  libksrch              # search algorithm library
-  libkxfs               # XML to filesystem library
-  libkxml               # XML container support library
-  libload               # loader tool utility library
-  libsra-schema         # weak-linked sra schema
-  libsradb              # API for accessing sra
-  libsrapath            # weak-link stubs for srapath
-  libsrareader          # reader library
-  libvdb                # virtual layer reading library
-  libwkdb               # physical layer update library
-  libwsradb             # update API for SRA
-  libwvdb               # virtual layer update library
-
-Package: sra-toolkit-libs-dev
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         sra-toolkit-libs0
-Description: Development files for the NCBI SRA Toolkit's libraries
- This package provides development support files for the
- NCBI SRA Toolkit's libraries.
diff --git a/debian/rules b/debian/rules
index 5991e74..cccbb2b 100755
--- a/debian/rules
+++ b/debian/rules
@@ -31,6 +31,7 @@ override_dh_install:
 	    mv debian/tmp/usr/bin/`readlink $$bin` $$bin ; \
 	    mv debian/tmp/usr/bin/`readlink $$bin` $$bin ; \
 	done
+	dh_install
 
 override_dh_auto_test:
 	echo "FIXME: try activating tests!!!!!!!!!!!!!!!!!!!!!!!!"
diff --git a/debian/sra-toolkit-libs-dev.install b/debian/sra-toolkit-libs-dev.install
deleted file mode 100644
index e7553b7..0000000
--- a/debian/sra-toolkit-libs-dev.install
+++ /dev/null
@@ -1 +0,0 @@
-lib??/*so usr/lib
diff --git a/debian/sra-toolkit-libs0.install b/debian/sra-toolkit-libs0.install
deleted file mode 100644
index 0b035c0..0000000
--- a/debian/sra-toolkit-libs0.install
+++ /dev/null
@@ -1 +0,0 @@
-lib??/*so.* usr/lib
diff --git a/debian/sra-toolkit-libs0.lintian-overrides b/debian/sra-toolkit-libs0.lintian-overrides
deleted file mode 100644
index 5701fa2..0000000
--- a/debian/sra-toolkit-libs0.lintian-overrides
+++ /dev/null
@@ -1,4 +0,0 @@
-# Temporarily needed as long as libsra-schema is weak-linked. 
-sra-toolkit-libs0: non-dev-pkg-with-shlib-symlink usr/lib/libsra-schema.so.1.0.4 usr/lib/libsra-schema.so
-sra-toolkit-libs0: package-name-doesnt-match-sonames libncbi-vdb2 libncbi-wvdb2
-sra-toolkit-libs0: no-symbols-control-file usr/lib/ib*

-- 
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