[med-svn] [Git][med-team/jellyfish][master] 3 commits: New upstream version 2.2.8

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / jellyfish


Commits:
d2ced9a4 by Michael R. Crusoe at 2018-02-11T04:40:47-08:00
New upstream version 2.2.8
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bd0b9735 by Michael R. Crusoe at 2018-02-11T04:40:49-08:00
Update upstream source from tag 'upstream/2.2.8'

Update to upstream version '2.2.8'
with Debian dir 7394e13779989895c917beecd9eaf77da6e91226
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c2cdb414 by Michael R. Crusoe at 2018-02-11T09:22:01-08:00
2.2.8

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30 changed files:

- Makefile.am
- configure.ac
- debian/changelog
- debian/control
- debian/patches/drop-rpath
- debian/patches/portability.patch
- − debian/patches/rename-python-module-to-dna_jellyfish.patch
- debian/patches/series
- + debian/patches/skip_small_mers.sh
- debian/watch
- include/jellyfish/file_header.hpp
- include/jellyfish/hash_counter.hpp
- include/jellyfish/large_hash_array.hpp
- include/jellyfish/mer_overlap_sequence_parser.hpp
- include/jellyfish/rectangular_binary_matrix.hpp
- include/jellyfish/whole_sequence_parser.hpp
- jellyfish/dbg.cc
- lib/rectangular_binary_matrix.cc
- swig/Makefile.am
- swig/jellyfish.i
- swig/python/setup.py
- swig/python/test_hash_counter.py
- swig/python/test_mer_file.py
- swig/python/test_string_mers.py
- swig/ruby/test_hash_counter.rb
- swig/ruby/test_mer_file.rb
- swig/ruby/test_string_mers.rb
- swig/string_mers.i
- tests/compat.sh.in
- unit_tests/test_file_header.cc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/jellyfish/compare/746d4a7ebb994913da196ec16e1a885aa41c63b6...c2cdb414c927d03d225db69bacd80490554c75fb

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View it on GitLab: https://salsa.debian.org/med-team/jellyfish/compare/746d4a7ebb994913da196ec16e1a885aa41c63b6...c2cdb414c927d03d225db69bacd80490554c75fb
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