[med-svn] [Git][med-team/python-pysam][master] 7 commits: New upstream version 0.14+ds

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / python-pysam


Commits:
5aa6792b by Andreas Tille at 2018-02-17T14:42:30+01:00
New upstream version 0.14+ds
- - - - -
e4a71705 by Andreas Tille at 2018-02-17T14:42:51+01:00
Update upstream source from tag 'upstream/0.14+ds'

Update to upstream version '0.14+ds'
with Debian dir 59d7cbfb7f83d1d8a2700a77ac80a1f46e4136e0
- - - - -
5ba04e28 by Andreas Tille at 2018-02-17T14:50:47+01:00
Update patches and exclude tests using http access

- - - - -
18260489 by Andreas Tille at 2018-02-17T15:22:40+01:00
Bump versioned dependencies to samtools and related from 1.6 to 1.7

- - - - -
997f3a42 by Andreas Tille at 2018-02-17T15:24:10+01:00
cme fix dpkg-control

- - - - -
1f4b2b84 by Andreas Tille at 2018-02-17T15:24:32+01:00
debhelper 11

- - - - -
573a161d by Andreas Tille at 2018-02-17T15:58:33+01:00
do not remove samtools/tmp_file.h in clean target

- - - - -


30 changed files:

- .gitignore
- MANIFEST.in
- NEWS
- bcftools/HMM.c.pysam.c
- bcftools/bam2bcf.c.pysam.c
- bcftools/bam2bcf_indel.c.pysam.c
- bcftools/bam_sample.c.pysam.c
- + bcftools/bcftools.pysam.c
- + bcftools/bcftools.pysam.h
- bcftools/bin.c.pysam.c
- bcftools/ccall.c.pysam.c
- bcftools/consensus.c.pysam.c
- bcftools/convert.c.pysam.c
- bcftools/csq.c.pysam.c
- bcftools/em.c.pysam.c
- bcftools/filter.c.pysam.c
- bcftools/gvcf.c.pysam.c
- bcftools/hclust.c.pysam.c
- bcftools/kmin.c.pysam.c
- bcftools/main.c.pysam.c
- bcftools/mcall.c.pysam.c
- bcftools/mpileup.c.pysam.c
- bcftools/ploidy.c.pysam.c
- bcftools/prob1.c.pysam.c
- − bcftools/pysam.h
- bcftools/regidx.c.pysam.c
- + bcftools/reheader.c
- + bcftools/reheader.c.pysam.c
- bcftools/smpl_ilist.c.pysam.c
- bcftools/tabix.c.pysam.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-pysam/compare/273478d0c986de1b5550f2a3b4e44c793f0cad72...573a161da5f04049b8f8fb1faf176f4f14b0af83

---
View it on GitLab: https://salsa.debian.org/med-team/python-pysam/compare/273478d0c986de1b5550f2a3b4e44c793f0cad72...573a161da5f04049b8f8fb1faf176f4f14b0af83
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.alioth.debian.org/pipermail/debian-med-commit/attachments/20180217/86c56c8c/attachment.html>